BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031460
(159 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|C8YR32|LOXH1_MOUSE Lipoxygenase homology domain-containing protein 1 OS=Mus musculus
GN=Loxhd1 PE=2 SV=1
Length = 2068
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
YTV ++T I GTD+ + + ++ GD ++ ++ +N FER N D F+
Sbjct: 1682 YTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQS------ANWNKFERNNTDTFNF 1735
Query: 90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLA 142
G +C L + D G GW+ +YV+V ++R +F + WL+
Sbjct: 1736 SDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKD---NSRDETFRFQCDCWLS 1785
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
Y + ++TG + TDS + + LY D ++ L + L +YFERG +D F+
Sbjct: 686 YHISVKTGDVSGASTDSRVYIKLYGEKSDTIKQVLLVSDNNLK----DYFERGRVDEFTL 741
Query: 90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYE 149
+ G + L + D +G H GW+ V++ V + Q F +WL + +
Sbjct: 742 ETLNI-GTINRLVIGHDSTGMHAGWFLGSVQIR---VPRQGKQYTFPANRWLDKNQADGR 797
Query: 150 LSV 152
L V
Sbjct: 798 LEV 800
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 16 ISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPG 75
+ N+A ++V I+TG GTD+ + +TL+ G + +N
Sbjct: 958 LDNLALEQKDKSTTFSVTIKTGDKKNAGTDANVFITLF-----GTQDNNGMTLLKSSKTN 1012
Query: 76 YNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQF 135
+ FER +++IF+ L G + + + D +G+ GW+ ++VEV + + +C F
Sbjct: 1013 SDKFERDSIEIFTVETLDL-GDLWKVRIGHDNTGKAPGWFVDWVEVDAPSLG-KC--MTF 1068
Query: 136 TIEQWLATD 144
+WLA +
Sbjct: 1069 PCGRWLAKN 1077
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
Y V + TG GTD+ + VT++ A GD + L N FERG+ D F
Sbjct: 1951 YEVIVTTGYEPGAGTDANVFVTIFGANGDTGKRE-------LKQKMRNLFERGSTDRFFL 2003
Query: 90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEV--TSTGVHT 128
LG + + L D SG + GW VEV TSTGV T
Sbjct: 2004 ETLELG-ELRKVRLEHDSSGYYSGWLVEKVEVTNTSTGVAT 2043
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGD--GVRISNLEAWGGLMGPGYNYFERGNLDIF 87
Y + + TG + GTD+ + + ++ GD R+ N + + FE+G D F
Sbjct: 174 YEIKVYTGDVIGAGTDADVFINIFGEYGDTGERRLENEK----------DNFEKGAEDKF 223
Query: 88 SGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD 144
+ P L G + +N+ + G GW+ + + + G + F + +WLA D
Sbjct: 224 TLDAPDL-GQLMKINVGHNNKGGSAGWFLSKIIIEDIGNKRK---YDFPLNRWLALD 276
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 29 VYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFS 88
Y V + TG I GT S I + +Y A G+ + G + G F+RG DIF
Sbjct: 297 TYIVTVFTGDIRGAGTKSKIYLVMYGARGN-------KNSGKIFLEG-GVFDRGRTDIFH 348
Query: 89 GRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTS--TGVHTRCAQQQFTIEQWL 141
L P+ +++ G + GWYC V + TG+ QQ F WL
Sbjct: 349 IDLAVLLSPLSRVSIGHGNIGVNRGWYCEKVVILCPFTGI-----QQTFPCSNWL 398
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 29 VYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFS 88
VY V TG + GTD+ + +TL+ G ++ L + FE+ N+D+F
Sbjct: 44 VYEVVTATGDVRGAGTDANVFITLFGENGLSPKLH-------LTSKSESAFEKANVDVFR 96
Query: 89 GRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVT 122
R + G + + + D +G + WY + V VT
Sbjct: 97 VRTNNV-GLIYKIRIEHDNTGLNASWYLDRVIVT 129
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 26 DDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLD 85
D +Y+V I TG++ GTD+ + +T+Y +GD E + G N FE+G D
Sbjct: 1253 DIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGD-----TGERYLGKSENRTNKFEKGTAD 1307
Query: 86 IFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEV 121
F L G + + L D + WY VE+
Sbjct: 1308 TFIIEAADL-GVIYKIKLRHDNTKWCADWYVEKVEI 1342
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 15/126 (11%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
Y + I TG + GT S + V +Y G + + F+RG+ DIF
Sbjct: 816 YEIEIWTGDVGGAGTTSRVFVQIYGEEGKTEVL--------FLSSRSKVFDRGSKDIFQT 867
Query: 90 RGPCLG----GPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDT 145
+ G + + + D +G GW+ + V++T T F ++WLA +
Sbjct: 868 DTFTIYAIDLGALTKIRIRHDNTGNRPGWFLDRVDITDVNNET---TYYFPCQRWLAVEE 924
Query: 146 SPYELS 151
+LS
Sbjct: 925 DDGQLS 930
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLY--DAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIF 87
Y + + T +F GTD+ I + +Y DAV + + +FER + F
Sbjct: 1103 YEITLYTSDVFAAGTDANIFIVIYGCDAVCTRQKFLCTNKREQKL-----FFERKSASRF 1157
Query: 88 SGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQ-QFTIEQWLAT 143
+G + + + D +G + GW+C++V++ + F ++WLAT
Sbjct: 1158 IVELEDVGEIIEKIRIGHDNTGINPGWHCSHVDIRRLLPEKDGTETLTFPCDRWLAT 1214
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 11/123 (8%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGD-GVR-ISNLEAWGGLMGPGYNYFERGNLDIF 87
Y V + TG + GTD+ + + L+ VGD G R + N + FE+GN D F
Sbjct: 555 YRVTVCTGELEGAGTDANVYLCLFGDVGDTGERLLYNCRN-------NTDLFEKGNADEF 607
Query: 88 SGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSP 147
+ + V + + DG G GWY + V V G +F +WL D
Sbjct: 608 TIESVTMRK-VRRVRVRHDGKGSGSGWYLDRVLVREEG-QPESDNVEFPCLRWLDKDKDD 665
Query: 148 YEL 150
+L
Sbjct: 666 GQL 668
>sp|Q8IVV2|LOXH1_HUMAN Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens
GN=LOXHD1 PE=2 SV=3
Length = 1947
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
YTV ++T I GTD+ + + ++ GD ++ ++ +N FER N D F+
Sbjct: 1609 YTVAVKTSDILGAGTDANVFIIIFGENGDSGTLALKQS------ANWNKFERNNTDTFNF 1662
Query: 90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLA 142
G +C L + D G GW+ +YV+V ++R F + WL+
Sbjct: 1663 PDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKD---NSRDETFHFQCDCWLS 1712
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 16 ISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPG 75
+ N+A ++V I+TG GTD+ + +TL+ D ++ L++
Sbjct: 885 LDNLALEQKDKSTTFSVTIKTGVKKNAGTDANVFITLF-GTQDDTGMTLLKS----SKTN 939
Query: 76 YNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQF 135
+ FER +++IF+ LG + + L D +G+ GW+ ++VEV + + +C F
Sbjct: 940 SDKFERDSIEIFTVETLDLGD-LWKVRLGHDNTGKAPGWFVDWVEVDAPSL-GKC--MTF 995
Query: 136 TIEQWLATD 144
+WLA +
Sbjct: 996 PCGRWLAKN 1004
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
Y + ++TG + TDS + + LY D ++ L + L +YFERG +D F+
Sbjct: 408 YHISLKTGDVSGASTDSRVYIKLYGDKSDTIKQVLLVSDNNLK----DYFERGRVDEFTL 463
Query: 90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSPYE 149
+G + L + D +G H W+ V++ V + Q F +WL + +
Sbjct: 464 ETLNIGN-INRLVIGHDSTGMHASWFLGSVQIR---VPRQGKQYTFPANRWLDKNQADGR 519
Query: 150 LSV 152
L V
Sbjct: 520 LEV 522
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 26 DDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLD 85
D +Y+V I TG+I GTD+ + +T+Y +GD E + G N FERG D
Sbjct: 1180 DIVLYSVQIFTGNIPGAGTDAKVYITIYGDLGD-----TGERYLGKSENRTNKFERGTAD 1234
Query: 86 IFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEV 121
F L G + + L D S WY VE+
Sbjct: 1235 TFIIEAADL-GVIYKIKLRHDNSKWCADWYVEKVEI 1269
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLY-DAVGD-GVRISNLEAWGGLMGPGYNYFERGNLDIF 87
Y V + TG++ K GTD+ + +T+Y + GD G R N FE+G D F
Sbjct: 746 YEVQVVTGNVPKAGTDANVYLTIYGEEYGDTGERPLK-------KSDKSNKFEQGQTDTF 798
Query: 88 SGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSP 147
+ LG + + + D +G GW+ + +++T F ++WLA +
Sbjct: 799 TIYAIDLGA-LTKIRIRHDNTGNRAGWFLDRIDITDMNNEI---TYYFPCQRWLAVEEDD 854
Query: 148 YELS 151
+LS
Sbjct: 855 GQLS 858
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
Y V + TG + GT S I + +Y A G+ + G + G F+RG DIF
Sbjct: 20 YIVTVFTGDVRGAGTKSKIYLVMYGARGN-------KNSGKIFLEG-GVFDRGRTDIFHI 71
Query: 90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTS--TGVHTRCAQQQFTIEQWL 141
L P+ +++ G + GW+C V + TG+ QQ F WL
Sbjct: 72 ELAVLLSPLSRVSVGHGNVGVNRGWFCEKVVILCPFTGI-----QQTFPCSNWL 120
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 11/123 (8%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGD-GVR-ISNLEAWGGLMGPGYNYFERGNLDIF 87
Y V + TG + GTD+ + + L+ VGD G R + N + FE+GN D F
Sbjct: 277 YHVTVCTGELEGAGTDANVYLCLFGDVGDTGERLLYNCRN-------NTDLFEKGNADEF 329
Query: 88 SGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDTSP 147
+ + V + + DG G GWY + V V G +F +WL D
Sbjct: 330 TIESVTMRN-VRRVRIRHDGKGSGSGWYLDRVLVREEG-QPESDNVEFPCLRWLDKDKDD 387
Query: 148 YEL 150
+L
Sbjct: 388 GQL 390
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLY--DAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIF 87
Y + + T +F GTD+ I + +Y DAV + + +FER + F
Sbjct: 1030 YEITLYTSDVFAAGTDANIFIIIYGCDAV-----CTQQKYLCTNKREQKQFFERKSASRF 1084
Query: 88 SGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQ-QFTIEQWLAT 143
+G + + + + +G + GW+C++V++ A+ F ++WLAT
Sbjct: 1085 IVELEDVGEIIEKIRIGHNNTGMNPGWHCSHVDIRRLLPDKDGAETLTFPCDRWLAT 1141
>sp|Q2EG98|PK1L3_MOUSE Polycystic kidney disease protein 1-like 3 OS=Mus musculus GN=Pkd1l3
PE=2 SV=2
Length = 2201
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 59/153 (38%), Gaps = 22/153 (14%)
Query: 14 LSISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMG 73
+ ++ +A D S Y + + TG + T + + +TLY + G L
Sbjct: 1115 VKVTVLADNDPSSASHYLIQVYTGYRRRAATTAKVVITLYGSEGH-------SEPHHLCD 1167
Query: 74 PGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQ 133
P FERG LD+F G + L L D SG+ WY + V V+ T +
Sbjct: 1168 PEKTVFERGALDVFLLSTGSWLGDLHGLRLWHDNSGDSPSWYVSQVIVSDM---TTRKKW 1224
Query: 134 QFTIEQWLATD------------TSPYELSVFR 154
F WLA D S ELS FR
Sbjct: 1225 HFQCNCWLAVDLGNCERDRVFTPASRSELSSFR 1257
>sp|Q7Z443|PK1L3_HUMAN Polycystic kidney disease protein 1-like 3 OS=Homo sapiens
GN=PKD1L3 PE=2 SV=1
Length = 1732
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 53/137 (38%), Gaps = 10/137 (7%)
Query: 14 LSISNIAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMG 73
+ ++ +A D S Y + + TG T + + +TLY + G L
Sbjct: 729 VKVTVLADNDPSAQFHYLIQVYTGYRRSAATTAKVVITLYGSEGRSEP-------HHLCD 781
Query: 74 PGYNYFERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQ 133
P FERG LD+F G + +L L D SG WY + V V V +
Sbjct: 782 PQKTVFERGGLDVFLLTTWTSLGNLHSLRLWHDNSGVSPSWYVSQVIVCDMAVKRKW--- 838
Query: 134 QFTIEQWLATDTSPYEL 150
F WLA D EL
Sbjct: 839 HFLCNCWLAVDLGDCEL 855
>sp|Q7TN88|PK1L2_MOUSE Polycystic kidney disease protein 1-like 2 OS=Mus musculus GN=Pkd1l2
PE=2 SV=1
Length = 2461
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 10/115 (8%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
Y V + TG T S + +TLY + G+ L P FERG +D+F
Sbjct: 1393 YLVTVYTGHRRGAATSSKVTLTLYGSDGESEP-------HHLSDPDAAVFERGGVDVFLL 1445
Query: 90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATD 144
G + +L L D SG+ WY + V V + V + F WL+ D
Sbjct: 1446 STLFPLGELQSLRLWHDNSGDRPSWYVSRVLVYDSVVDRKW---YFLCNSWLSVD 1497
>sp|Q7Z442|PK1L2_HUMAN Polycystic kidney disease protein 1-like 2 OS=Homo sapiens GN=PKD1L2
PE=1 SV=4
Length = 2459
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
Y V + TG T S + VTLY DG R + L P FERG +D F
Sbjct: 1392 YLVTVYTGHRRGAATSSKVTVTLYGL--DGEREPH-----HLADPDTPVFERGAVDAFLL 1444
Query: 90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEV 121
G + +L L D SG+ WY + V V
Sbjct: 1445 STLFPLGELRSLRLWHDNSGDRPSWYVSRVLV 1476
>sp|O16025|AOSL_PLEHO Allene oxide synthase-lipoxygenase protein OS=Plexaura homomalla
PE=1 SV=1
Length = 1066
Score = 33.5 bits (75), Expect = 0.63, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 27 DCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDI 86
+ +Y V + TG GTD+ I + + A G + L+ W +N FE G+ +
Sbjct: 373 NAIYNVEVETGDREHAGTDATITIRITGAKGRTDYL-KLDKW------FHNDFEAGSKEQ 425
Query: 87 FSGRGPCLGGPVCALNLSSDGSGEHHG---WYCNYVEVTSTGVHTRCAQQQFTIEQWLAT 143
++ +G +G + + L SDG G G W+ N V + S+ T+ F +W+
Sbjct: 426 YTVQGFDVGD-IQLIELHSDGGGYWSGDPDWFVNRVIIISS---TQDRVYSFPCFRWVIK 481
Query: 144 D 144
D
Sbjct: 482 D 482
>sp|Q9Z0T6|PKDRE_MOUSE Polycystic kidney disease and receptor for egg jelly-related protein
OS=Mus musculus GN=Pkdrej PE=2 SV=1
Length = 2126
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 23 DDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERG 82
D D Y V I TGS + GT + + + L G S++ L P + RG
Sbjct: 1109 DPFDTLCYLVTIFTGSRWGSGTRANVFIQLMGTEGT----SDVHC---LSHPYFKTLYRG 1161
Query: 83 NLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLA 142
+++ F G + ++ + D SGE WY + ++V + + R F +WL+
Sbjct: 1162 SINTFLLTTKNDLGDIHSIRVWHDNSGEAPSWYLSRIKVENL-FNKRI--WLFVCRRWLS 1218
Query: 143 TDTS 146
DT+
Sbjct: 1219 VDTT 1222
>sp|O08852|PKD1_MOUSE Polycystin-1 OS=Mus musculus GN=Pkd1 PE=1 SV=2
Length = 4293
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 47/127 (37%), Gaps = 12/127 (9%)
Query: 19 IAFADDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNY 78
I F Y + ++TG GT + +G+ LY G+ R G G
Sbjct: 3101 IPFCGKGGRFKYEILVKTGWSRGSGTTAHVGIMLY---GEDNRS------GHRHLDGDRA 3151
Query: 79 FERGNLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIE 138
F R +LDIF P G V + + D G W+ ++ V F +
Sbjct: 3152 FHRNSLDIFQIATPHSLGSVWKIRVWHDNKGLSPAWFLQHIIVRDL---QSARSTFFLVN 3208
Query: 139 QWLATDT 145
WL+ +T
Sbjct: 3209 DWLSVET 3215
>sp|P98161|PKD1_HUMAN Polycystin-1 OS=Homo sapiens GN=PKD1 PE=1 SV=3
Length = 4303
Score = 31.6 bits (70), Expect = 2.1, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 12/116 (10%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
Y + ++TG GT + +G+ LY GV + G G F R +LDIF
Sbjct: 3120 YEILVKTGWGRGSGTTAHVGIMLY-----GVDSRS----GHRHLDGDRAFHRNSLDIFRI 3170
Query: 90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLATDT 145
P G V + + D G W+ +V V R A F + WL+ +T
Sbjct: 3171 ATPHSLGSVWKIRVWHDNKGLSPAWFLQHVIVRDLQT-ARSA--FFLVNDWLSVET 3223
>sp|P48999|LOX5_MOUSE Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alox5 PE=1 SV=3
Length = 674
Score = 31.6 bits (70), Expect = 2.2, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
YTV + TGS + GTD I ++L + G + +A+ YN FERG +D +
Sbjct: 4 YTVTVATGSQWFAGTDDYIYLSLIGSAGCSEKHLLDKAF-------YNDFERGAVDSYDV 56
Query: 90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTS 123
G + + + H WY Y+ + +
Sbjct: 57 TVDEELGEIYLVKIEKRKYWLHDDWYLKYITLKT 90
>sp|P51399|LOX5_MESAU Arachidonate 5-lipoxygenase OS=Mesocricetus auratus GN=ALOX5 PE=2
SV=2
Length = 673
Score = 31.2 bits (69), Expect = 2.7, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
YTV + TGS + GTD I ++L + G + +A+ YN FERG +D +
Sbjct: 4 YTVTVATGSQWFAGTDDYIYLSLIGSAGCSEKHLLDKAF-------YNDFERGAVDSYDV 56
Query: 90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTS 123
G + + + H WY Y+ + +
Sbjct: 57 TVDEELGEIQLVRIEKRKYWLHDDWYLKYITLKT 90
>sp|P09917|LOX5_HUMAN Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2
Length = 674
Score = 31.2 bits (69), Expect = 3.0, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIF 87
YTV + TGS + GTD I ++L + G + L P YN FERG +D +
Sbjct: 4 YTVTVATGSQWFAGTDDYIYLSLVGSAGCSEK-------HLLDKPFYNDFERGAVDSY 54
>sp|P12527|LOX5_RAT Arachidonate 5-lipoxygenase OS=Rattus norvegicus GN=Alox5 PE=1 SV=3
Length = 673
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
YTV + TGS + GTD I ++L + G + +A+ YN FERG D +
Sbjct: 4 YTVTVATGSQWFAGTDDYIYLSLIGSAGCSEKHLLDKAF-------YNDFERGGRDSYDV 56
Query: 90 RGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTS 123
G + + + H WY Y+ + +
Sbjct: 57 TVDEELGEIYLVKIEKRKYRLHDDWYLKYITLKT 90
>sp|Q9NTG1|PKDRE_HUMAN Polycystic kidney disease and receptor for egg jelly-related protein
OS=Homo sapiens GN=PKDREJ PE=2 SV=2
Length = 2253
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 23 DDSDDCVYTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERG 82
D D+ Y V I TGS + GT + + V L V S++ L P + RG
Sbjct: 1225 DPYDNLCYLVTIFTGSRWGSGTRANVFVQLRGTVST----SDVHC---LSHPHFTTLYRG 1277
Query: 83 NLDIFSGRGPCLGGPVCALNLSSDGSGEHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWLA 142
+++ F G + ++ + + G WY + ++V + +R F ++WL+
Sbjct: 1278 SINTFLLTTKSDLGDIHSIRVWHNNEGRSPSWYLSRIKV--ENLFSRHI-WLFICQKWLS 1334
Query: 143 TDTS 146
DT+
Sbjct: 1335 VDTT 1338
>sp|Q2KMM4|LX12B_RAT Arachidonate 12-lipoxygenase, 12R-type OS=Rattus norvegicus
GN=Alox12b PE=2 SV=1
Length = 701
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 30 YTVYIRTGSIFKGGTDSIIGVTLYDAVGDGVRISNLEAWGGLMGPGYNYFERGNLDIFSG 89
Y V + TG+ F GT I +T+ G+ + L +G F G +D ++
Sbjct: 4 YKVKVATGTDFFSGTLDSISLTIVGTQGESHK-QRLNHFG-------RDFATGAVDDYTV 55
Query: 90 RGPCLGGPVCALNLSSDGSG--EHHGWYCNYVEVTSTGVHTRCAQQQFTIEQWL 141
+ G + + L + WYCNYV++ + C F QW+
Sbjct: 56 QCQQDLGELIIIRLHKEPHSFLPKDPWYCNYVQICAPN----CRVYHFPAYQWM 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,762,297
Number of Sequences: 539616
Number of extensions: 2801893
Number of successful extensions: 4447
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 4402
Number of HSP's gapped (non-prelim): 44
length of query: 159
length of database: 191,569,459
effective HSP length: 108
effective length of query: 51
effective length of database: 133,290,931
effective search space: 6797837481
effective search space used: 6797837481
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)