BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031462
MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG
NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACK
EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAARI

High Scoring Gene Products

Symbol, full name Information P value
AT1G29520 protein from Arabidopsis thaliana 2.3e-55
AT5G46530 protein from Arabidopsis thaliana 1.0e-52
AT5G18970 protein from Arabidopsis thaliana 3.2e-26
AT1G04560 protein from Arabidopsis thaliana 2.9e-23

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031462
        (159 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2013708 - symbol:AT1G29520 "AT1G29520" species...   571  2.3e-55   1
TAIR|locus:2151486 - symbol:AT5G46530 "AT5G46530" species...   546  1.0e-52   1
TAIR|locus:2179639 - symbol:AT5G18970 "AT5G18970" species...   296  3.2e-26   1
TAIR|locus:2197823 - symbol:AT1G04560 "AT1G04560" species...   268  2.9e-23   1


>TAIR|locus:2013708 [details] [associations]
            symbol:AT1G29520 "AT1G29520" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0016020 "membrane"
            evidence=ISS] Pfam:PF05512 EMBL:CP002684 GenomeReviews:CT485782_GR
            EMBL:AC068667 InterPro:IPR008390 HOGENOM:HOG000237713 EMBL:AY074324
            EMBL:AY096597 IPI:IPI00549032 PIR:B86418 RefSeq:NP_174245.1
            UniGene:At.40728 UniGene:At.70532 EnsemblPlants:AT1G29520.1
            GeneID:839829 KEGG:ath:AT1G29520 TAIR:At1g29520 eggNOG:NOG321338
            InParanoid:Q9C7P9 OMA:TAATIAW PhylomeDB:Q9C7P9
            ProtClustDB:CLSN2679715 ArrayExpress:Q9C7P9 Genevestigator:Q9C7P9
            Uniprot:Q9C7P9
        Length = 158

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 110/154 (71%), Positives = 123/154 (79%)

Query:     1 MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
             M   Q+KPVAS LLVLNFCM+VIVLGIGGWAMNRAI+HGF +GP+ ELPAHFSPIYFPMG
Sbjct:     1 MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMG 60

Query:    61 NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPXXXXXXXXXXXXXXXXXGFACK 120
             NAATGFFV FAL+AGVVGAAS I+GL+H+R WT  S+P                 GFA K
Sbjct:    61 NAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 120

Query:   121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHG 154
             EIEL  RNA+LRTMEAFLIILSVTQL+YIAA+HG
Sbjct:   121 EIELQGRNAKLRTMEAFLIILSVTQLIYIAAVHG 154


>TAIR|locus:2151486 [details] [associations]
            symbol:AT5G46530 "AT5G46530" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0016020 "membrane" evidence=ISS] Pfam:PF05512
            EMBL:CP002688 IPI:IPI00548314 RefSeq:NP_199465.4 UniGene:At.55406
            EnsemblPlants:AT5G46530.1 GeneID:834696 KEGG:ath:AT5G46530
            OMA:SAATIAW InterPro:IPR008390 Uniprot:F4KHI4
        Length = 157

 Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 104/154 (67%), Positives = 119/154 (77%)

Query:     1 MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
             MV  QMKPVAS LLVLNFCM+ IVLGIG W+MN+AI HGF+IG  + LPAHFSPI+FPMG
Sbjct:     1 MVEHQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMG 60

Query:    61 NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPXXXXXXXXXXXXXXXXXGFACK 120
             NAATGFF+ FALIAGV GAAS I+G++H++ WT  S+P                 GF CK
Sbjct:    61 NAATGFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCK 120

Query:   121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHG 154
             EIEL +RNARLRTMEAFLIILS TQLLYIAAI+G
Sbjct:   121 EIELGMRNARLRTMEAFLIILSATQLLYIAAIYG 154


>TAIR|locus:2179639 [details] [associations]
            symbol:AT5G18970 "AT5G18970" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0016020 "membrane" evidence=ISS] Pfam:PF05512
            EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR008390
            HOGENOM:HOG000237713 EMBL:AY084421 IPI:IPI00542119
            RefSeq:NP_197398.1 UniGene:At.31351 UniGene:At.69545 STRING:Q8LG79
            PaxDb:Q8LG79 PRIDE:Q8LG79 EnsemblPlants:AT5G18970.1 GeneID:832015
            KEGG:ath:AT5G18970 TAIR:At5g18970 eggNOG:NOG311958
            InParanoid:Q8LG79 OMA:MGLACKE PhylomeDB:Q8LG79
            ProtClustDB:CLSN2686748 Genevestigator:Q8LG79 Uniprot:Q8LG79
        Length = 171

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 63/155 (40%), Positives = 83/155 (53%)

Query:     1 MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
             M +   K  A +LL+LN  ++ ++  I  WA+N  IE       +  LPA   PIYFP+G
Sbjct:     1 MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query:    61 NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPXXXXXXXXXXXXXXXXXGFACK 120
             N ATGFFV F LIAGVVG A+ + G+ +V  W + ++                  G ACK
Sbjct:    61 NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query:   121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGG 155
             EI +    A LRT+E   II+S TQLL   AIH G
Sbjct:   121 EINIGWTEANLRTLEVLTIIVSATQLLCTGAIHAG 155


>TAIR|locus:2197823 [details] [associations]
            symbol:AT1G04560 "AT1G04560" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF05512 EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC002376 InterPro:IPR008390
            EMBL:AF360343 EMBL:AY051080 IPI:IPI00537314 PIR:B86178
            RefSeq:NP_563710.1 UniGene:At.10465 PaxDb:O23029 PRIDE:O23029
            EnsemblPlants:AT1G04560.1 GeneID:839491 KEGG:ath:AT1G04560
            TAIR:At1g04560 eggNOG:NOG327574 HOGENOM:HOG000237713
            InParanoid:O23029 OMA:EIHIGGH PhylomeDB:O23029
            ProtClustDB:CLSN2687672 ArrayExpress:O23029 Genevestigator:O23029
            Uniprot:O23029
        Length = 186

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 63/157 (40%), Positives = 86/157 (54%)

Query:     1 MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
             M  T  + +A+ LL LN  M++IVLG   W +N+ I +G    PSF             G
Sbjct:     1 MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYI-NGQTNHPSFG------------G 47

Query:    61 NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPXXXXXXXXXXXXXXXXXGFACK 120
             N AT FF+TF+++A VVG AS +AG NH+R W  DS+                  G ACK
Sbjct:    48 NGATPFFLTFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACK 107

Query:   121 EIELH-IRNARLRTMEAFLIILSVTQLLYIAAIHGGA 156
             +I +   R  RL+ +EAF+IIL+ TQLLY+  IH G+
Sbjct:   108 QINIGGWRGWRLKMIEAFIIILTFTQLLYLMLIHAGS 144


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.331   0.142   0.446    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      159       142   0.00091  102 3  11 21  0.46    30
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  570 (61 KB)
  Total size of DFA:  131 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.86u 0.11s 11.97t   Elapsed:  00:00:01
  Total cpu time:  11.86u 0.11s 11.97t   Elapsed:  00:00:01
  Start:  Sat May 11 03:04:32 2013   End:  Sat May 11 03:04:33 2013

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