Your job contains 1 sequence.
>031473
MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGG
EGHEGGIFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPE
ILKIRTTPRPTVAGPKDTPVDLVMKKTYDAKSGKGMPDL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031473
(159 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504954880 - symbol:AT5G23535 species:3702 "Ara... 670 7.4e-66 1
DICTYBASE|DDB_G0269640 - symbol:DDB_G0269640 "39S ribosom... 248 3.9e-21 1
UNIPROTKB|Q3SYS0 - symbol:MRPL24 "39S ribosomal protein L... 217 7.5e-18 1
UNIPROTKB|F1RHJ1 - symbol:MRPL24 "Uncharacterized protein... 215 1.2e-17 1
ZFIN|ZDB-GENE-040718-98 - symbol:mrpl24 "mitochondrial ri... 214 1.6e-17 1
TIGR_CMR|BA_0121 - symbol:BA_0121 "ribosomal protein L24"... 212 2.5e-17 1
MGI|MGI:1914957 - symbol:Mrpl24 "mitochondrial ribosomal ... 207 8.6e-17 1
RGD|1359289 - symbol:mrpl24 "mitochondrial ribosomal prot... 206 1.1e-16 1
TIGR_CMR|CHY_2298 - symbol:CHY_2298 "ribosomal protein L2... 205 1.4e-16 1
UNIPROTKB|Q96A35 - symbol:MRPL24 "39S ribosomal protein L... 204 1.8e-16 1
UNIPROTKB|E2QS97 - symbol:MRPL24 "Uncharacterized protein... 203 2.3e-16 1
UNIPROTKB|Q29MA5 - symbol:mRpL24 "Probable 39S ribosomal ... 180 6.2e-14 1
FB|FBgn0031651 - symbol:mRpL24 "mitochondrial ribosomal p... 175 2.1e-13 1
GENEDB_PFALCIPARUM|PFF0245w - symbol:PFF0245w "50S riboso... 174 2.7e-13 1
UNIPROTKB|C6KSP8 - symbol:PFF0245w "Mitochondrial ribosom... 174 2.7e-13 1
UNIPROTKB|P60627 - symbol:rplX "50S ribosomal protein L24... 164 3.1e-12 1
TIGR_CMR|DET_0485 - symbol:DET_0485 "ribosomal protein L2... 163 3.9e-12 1
TIGR_CMR|GSU_2846 - symbol:GSU_2846 "ribosomal protein L2... 159 1.0e-11 1
TIGR_CMR|SO_0242 - symbol:SO_0242 "ribosomal protein L24"... 158 1.3e-11 1
UNIPROTKB|P60624 - symbol:rplX "50S ribosomal subunit pro... 153 4.5e-11 1
TIGR_CMR|CBU_0249 - symbol:CBU_0249 "ribosomal protein L2... 151 7.4e-11 1
GENEDB_PFALCIPARUM|PFL1150c - symbol:PFL1150c "ribosomal ... 150 9.4e-11 1
UNIPROTKB|Q8I5H8 - symbol:PFL1150c "Mitochondrial ribosom... 150 9.4e-11 1
UNIPROTKB|Q9KNZ5 - symbol:rplX "50S ribosomal protein L24... 138 1.8e-09 1
TIGR_CMR|VC_2585 - symbol:VC_2585 "ribosomal protein L24"... 138 1.8e-09 1
TAIR|locus:2172154 - symbol:RPL24 "plastid ribosomal prot... 136 2.9e-09 1
TIGR_CMR|ECH_0420 - symbol:ECH_0420 "ribosomal protein L2... 132 7.6e-09 1
TIGR_CMR|APH_0291 - symbol:APH_0291 "ribosomal protein L2... 129 1.6e-08 1
TIGR_CMR|SPO_0496 - symbol:SPO_0496 "ribosomal protein L2... 128 2.0e-08 1
WB|WBGene00019076 - symbol:mrpl-24 species:6239 "Caenorha... 124 1.7e-07 1
UNIPROTKB|H9KZY7 - symbol:MRPL24 "Uncharacterized protein... 108 2.6e-06 1
TIGR_CMR|CJE_1864 - symbol:CJE_1864 "ribosomal protein L2... 89 0.00027 1
TIGR_CMR|NSE_0277 - symbol:NSE_0277 "ribosomal protein L2... 89 0.00027 1
>TAIR|locus:504954880 [details] [associations]
symbol:AT5G23535 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AB025633 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 HOGENOM:HOG000039891 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 HAMAP:MF_01326_B OMA:VIQAYPA EMBL:BT011601
EMBL:BT012239 EMBL:AK227904 IPI:IPI00524746 RefSeq:NP_680212.1
UniGene:At.44055 ProteinModelPortal:Q9LT09 SMR:Q9LT09 STRING:Q9LT09
PaxDb:Q9LT09 PRIDE:Q9LT09 EnsemblPlants:AT5G23535.1 GeneID:832419
KEGG:ath:AT5G23535 TAIR:At5g23535 InParanoid:Q9LT09
PhylomeDB:Q9LT09 ProtClustDB:CLSN2690194 Genevestigator:Q9LT09
Uniprot:Q9LT09
Length = 159
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 128/159 (80%), Positives = 137/159 (86%)
Query: 1 MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXX 60
MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG IKRVIRSQNRVIVEGKNL+
Sbjct: 1 MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGTIKRVIRSQNRVIVEGKNLIKKHIKGG 60
Query: 61 XXXXXXXFTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPE 120
FTVEAP+HASNVQV+DPVTG+PCKVG KYLEDGTKVRVARG G SGSIIPRPE
Sbjct: 61 PDHEGGIFTVEAPLHASNVQVVDPVTGRPCKVGVKYLEDGTKVRVARGTGTSGSIIPRPE 120
Query: 121 ILKIRTTPRPTVAGPKDTPVDLVMKKTYDAKSGKGMPDL 159
ILKIR TPRPT AGPKDTP++ V ++TYDAK+GKGMPDL
Sbjct: 121 ILKIRATPRPTTAGPKDTPMEFVWEQTYDAKTGKGMPDL 159
>DICTYBASE|DDB_G0269640 [details] [associations]
symbol:DDB_G0269640 "39S ribosomal protein L24,
mitochondrial" species:44689 "Dictyostelium discoideum" [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 dictyBase:DDB_G0269640
Pfam:PF00467 EMBL:AAFI02000005 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
HAMAP:MF_01326_B RefSeq:XP_646137.1 ProteinModelPortal:Q55DJ4
STRING:Q55DJ4 EnsemblProtists:DDB0190423 GeneID:8617087
KEGG:ddi:DDB_G0269640 InParanoid:Q55DJ4 OMA:SHIDPKY
ProtClustDB:CLSZ2431389 Uniprot:Q55DJ4
Length = 164
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 57/142 (40%), Positives = 79/142 (55%)
Query: 9 LIRHWKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXF 68
LI WK ++GD V II GKDKG+ G IK V + + +IVEG L+ +
Sbjct: 15 LIPKWKYVKGDKVQIISGKDKGKQGIIKSVNKKDSNLIVEGLKLLKKLTKPNKRSKAMAY 74
Query: 69 TVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEI-LKIRTT 127
T EAPIH SN+ +DP PCKV + L DG + RV++ S SII +P++ +
Sbjct: 75 TKEAPIHYSNISHIDPKYNVPCKVRFQ-LVDGARERVSK---ISNSIIAKPDLSANFKKW 130
Query: 128 PRPTVAGPKDTPVDLVMKKTYD 149
R V GP DT ++V K+T+D
Sbjct: 131 RRDNVEGPYDTTPEIVKKRTFD 152
>UNIPROTKB|Q3SYS0 [details] [associations]
symbol:MRPL24 "39S ribosomal protein L24, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
Pfam:PF00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 PANTHER:PTHR12903 TIGRFAMs:TIGR01079 PDB:2FTC
PDBsum:2FTC EMBL:BC103424 IPI:IPI00691136 RefSeq:NP_001029748.1
UniGene:Bt.47838 ProteinModelPortal:Q3SYS0 STRING:Q3SYS0
Ensembl:ENSBTAT00000001991 GeneID:532203 KEGG:bta:532203 CTD:79590
GeneTree:ENSGT00390000014542 HOGENOM:HOG000031326
HOVERGEN:HBG093899 InParanoid:Q3SYS0 OMA:NTHYRYV OrthoDB:EOG4KD6MZ
EvolutionaryTrace:Q3SYS0 NextBio:20875629 Uniprot:Q3SYS0
Length = 216
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 49/137 (35%), Positives = 75/137 (54%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTVEA 72
W + GD V I+ GKD G+ G + +VIR +N V+VEG N EA
Sbjct: 54 WHLFCGDRVEILEGKDAGKQGKVVQVIRQRNWVVVEGLNTHYRYVGKTVDFRGTMVPSEA 113
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR-TTPRPT 131
P+ + V+++DP+ KP +V ++ E G +VRV+ SG IIP+P++ + P
Sbjct: 114 PLLHNQVKLVDPMDRKPTEVEWRFTEAGERVRVST---RSGRIIPKPDVPRADGIVPETW 170
Query: 132 VAGPKDTPVDLVMKKTY 148
+ GPKDT V+ ++KTY
Sbjct: 171 IDGPKDTSVEDALEKTY 187
>UNIPROTKB|F1RHJ1 [details] [associations]
symbol:MRPL24 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 HAMAP:MF_01326_B CTD:79590
GeneTree:ENSGT00390000014542 OMA:NTHYRYV EMBL:CU582900
RefSeq:NP_001231376.1 RefSeq:NP_001231377.1 UniGene:Ssc.2929
Ensembl:ENSSSCT00000007086 GeneID:100156363 KEGG:ssc:100156363
Uniprot:F1RHJ1
Length = 216
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 50/137 (36%), Positives = 72/137 (52%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTVEA 72
W + GD V I+ GKD G+ G + +VIR +N V+VEG N EA
Sbjct: 54 WHLFCGDKVEILEGKDAGKQGKVVQVIRQRNWVVVEGLNTHYRYVGKTVDYRGTMIPSEA 113
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR-TTPRPT 131
P+ + V+++DP KP V ++ E G +VRV+ SG IIP+PE + P
Sbjct: 114 PLLHNQVKLVDPTDRKPTDVEWRFTEAGERVRVST---RSGRIIPKPEFPRADGIVPETW 170
Query: 132 VAGPKDTPVDLVMKKTY 148
+ GPKDT V+ ++KTY
Sbjct: 171 IDGPKDTSVEDALEKTY 187
>ZFIN|ZDB-GENE-040718-98 [details] [associations]
symbol:mrpl24 "mitochondrial ribosomal protein L24"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
ZFIN:ZDB-GENE-040718-98 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:BX927401 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 PANTHER:PTHR12903 TIGRFAMs:TIGR01079 CTD:79590
GeneTree:ENSGT00390000014542 HOGENOM:HOG000031326
HOVERGEN:HBG093899 OMA:NTHYRYV OrthoDB:EOG4KD6MZ EMBL:BC076182
IPI:IPI00492356 RefSeq:NP_001002401.1 UniGene:Dr.9429 HSSP:Q9RXJ1
ProteinModelPortal:Q6DH02 STRING:Q6DH02 PRIDE:Q6DH02
Ensembl:ENSDART00000010862 GeneID:436674 KEGG:dre:436674
InParanoid:A3KQS2 NextBio:20831117 Bgee:Q6DH02 Uniprot:Q6DH02
Length = 216
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 47/137 (34%), Positives = 75/137 (54%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTVEA 72
W ++RGD V ++ GK+KG+ G + +VIR++N VI+EG N EA
Sbjct: 54 WPVVRGDTVEVLSGKEKGKQGKVAQVIRARNWVILEGLNTHYRYVGRSGDYRGTYLASEA 113
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEIL-KIRTTPRPT 131
P+ ++ ++DP KP ++ +Y E+G +VRV+ +G IIP+P K P+
Sbjct: 114 PLLLKDIALIDPTDRKPTEIQWRYTEEGERVRVSV---RTGRIIPKPVFQRKDGIVPQQW 170
Query: 132 VAGPKDTPVDLVMKKTY 148
GPKDT + ++KTY
Sbjct: 171 KDGPKDTSPEDTLQKTY 187
>TIGR_CMR|BA_0121 [details] [associations]
symbol:BA_0121 "ribosomal protein L24" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
ProtClustDB:PRK00004 HAMAP:MF_01326_B RefSeq:NP_842689.1
RefSeq:YP_016726.1 RefSeq:YP_026407.1 ProteinModelPortal:Q81VR9
DNASU:1086419 EnsemblBacteria:EBBACT00000008351
EnsemblBacteria:EBBACT00000018007 EnsemblBacteria:EBBACT00000023262
GeneID:1086419 GeneID:2819215 GeneID:2851558 KEGG:ban:BA_0121
KEGG:bar:GBAA_0121 KEGG:bat:BAS0121 OMA:QEAPIQA
BioCyc:BANT260799:GJAJ-132-MONOMER
BioCyc:BANT261594:GJ7F-134-MONOMER Uniprot:Q81VR9
Length = 103
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 47/97 (48%), Positives = 58/97 (59%)
Query: 15 ILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXX-XXXXFTVEAP 73
+ +GD V +I GKDKG+ G I QNRVIVEG N+V T EAP
Sbjct: 3 VKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAP 62
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
IH SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 63 IHVSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>MGI|MGI:1914957 [details] [associations]
symbol:Mrpl24 "mitochondrial ribosomal protein L24"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 MGI:MGI:1914957 Pfam:PF00467
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 CTD:79590 GeneTree:ENSGT00390000014542
HOGENOM:HOG000031326 HOVERGEN:HBG093899 OMA:NTHYRYV
OrthoDB:EOG4KD6MZ eggNOG:NOG325647 HSSP:Q9RXJ1 EMBL:AK003362
EMBL:AK008117 EMBL:AK008961 EMBL:AK013394 EMBL:AK019976
EMBL:AK020157 EMBL:AK167623 EMBL:BC004736 EMBL:BC025506
EMBL:BC031730 IPI:IPI00162769 RefSeq:NP_080867.2 UniGene:Mm.393802
ProteinModelPortal:Q9CQ06 SMR:Q9CQ06 STRING:Q9CQ06
PhosphoSite:Q9CQ06 PaxDb:Q9CQ06 PRIDE:Q9CQ06
Ensembl:ENSMUST00000019854 Ensembl:ENSMUST00000119968
Ensembl:ENSMUST00000121048 Ensembl:ENSMUST00000121920 GeneID:67707
KEGG:mmu:67707 UCSC:uc008ptd.1 InParanoid:Q9CQ06 NextBio:325321
Bgee:Q9CQ06 CleanEx:MM_MRPL24 Genevestigator:Q9CQ06 Uniprot:Q9CQ06
Length = 216
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 47/137 (34%), Positives = 72/137 (52%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTVEA 72
W + GD V I+ GKD G+ G + +V+R +N V++EG N EA
Sbjct: 54 WHLFCGDMVEILEGKDAGKQGKVVQVVRQRNWVVLEGLNTHYRYIGRTKDHRGTMIASEA 113
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR-TTPRPT 131
P+ V+++DPV KP ++ ++ E G +VRV+ SG IIP+PE + P
Sbjct: 114 PLLHHQVKLVDPVDRKPTEIQWRFTEAGERVRVST---RSGRIIPKPEFPRADGIVPETW 170
Query: 132 VAGPKDTPVDLVMKKTY 148
GPKDT V+ +++TY
Sbjct: 171 TDGPKDTSVEDALERTY 187
>RGD|1359289 [details] [associations]
symbol:mrpl24 "mitochondrial ribosomal protein L24"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR003256 InterPro:IPR005825
PROSITE:PS01108 RGD:1359289 Pfam:PF00467 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 CTD:79590 GeneTree:ENSGT00390000014542
HOGENOM:HOG000031326 HOVERGEN:HBG093899 OrthoDB:EOG4KD6MZ
eggNOG:NOG325647 HSSP:Q9RXJ1 EMBL:BC082018 IPI:IPI00372397
RefSeq:NP_001007638.1 UniGene:Rn.162593 ProteinModelPortal:Q66H47
STRING:Q66H47 PhosphoSite:Q66H47 Ensembl:ENSRNOT00000035271
GeneID:295224 KEGG:rno:295224 UCSC:RGD:1359289 InParanoid:Q66H47
NextBio:639133 Genevestigator:Q66H47 Uniprot:Q66H47
Length = 216
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 47/137 (34%), Positives = 72/137 (52%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTVEA 72
W + GD V I+ GKD G+ G + +V+R +N V++EG N EA
Sbjct: 54 WHLFCGDMVEILEGKDAGKQGKVVQVVRQRNWVVLEGLNTHYRYIGRTKDHRGTMIPSEA 113
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR-TTPRPT 131
P+ V+++DPV KP ++ ++ E G +VRV+ SG IIP+PE + P
Sbjct: 114 PLLHHQVKLVDPVDRKPTEIQWRFTEAGERVRVST---RSGRIIPKPEFPRADGIVPETW 170
Query: 132 VAGPKDTPVDLVMKKTY 148
GPKDT V+ +++TY
Sbjct: 171 TDGPKDTSVEDALERTY 187
>TIGR_CMR|CHY_2298 [details] [associations]
symbol:CHY_2298 "ribosomal protein L24" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR003256 PROSITE:PS01108 Pfam:PF00467
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 ProtClustDB:PRK00004 HAMAP:MF_01326_B
RefSeq:YP_361107.1 ProteinModelPortal:Q3A9S7 SMR:Q3A9S7
STRING:Q3A9S7 GeneID:3726665 KEGG:chy:CHY_2298 PATRIC:21277667
OMA:VIQAYPA BioCyc:CHYD246194:GJCN-2297-MONOMER Uniprot:Q3A9S7
Length = 107
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 44/100 (44%), Positives = 59/100 (59%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTV-EA 72
K+ +GD V++I GKDK + G I +V+ +NRV+VEG N+V EA
Sbjct: 5 KVKKGDMVLVIAGKDKDKKGKIVQVLPKENRVVVEGVNIVKRHTRPNPKLPQGGIVEKEA 64
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 112
PIH SNV V+ P GKP +VG K+L DG K+RV + G S
Sbjct: 65 PIHVSNVMVICPSCGKPTRVGKKFLADGKKIRVCKKCGES 104
>UNIPROTKB|Q96A35 [details] [associations]
symbol:MRPL24 "39S ribosomal protein L24, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
Pfam:PF00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:CH471121 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
EMBL:AL590666 eggNOG:COG0198 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
CTD:79590 HOVERGEN:HBG093899 OMA:NTHYRYV OrthoDB:EOG4KD6MZ
HSSP:Q9RXJ1 EMBL:AK024570 EMBL:CR457329 EMBL:AK222500 EMBL:AK223066
EMBL:BC012440 EMBL:BC016700 EMBL:AB051341 IPI:IPI00514506
RefSeq:NP_078816.2 RefSeq:NP_663781.1 UniGene:Hs.418233
ProteinModelPortal:Q96A35 SMR:Q96A35 IntAct:Q96A35 STRING:Q96A35
PhosphoSite:Q96A35 DMDM:74751733 PaxDb:Q96A35 PRIDE:Q96A35
Ensembl:ENST00000361531 Ensembl:ENST00000368211
Ensembl:ENST00000412846 Ensembl:ENST00000420938
Ensembl:ENST00000434558 GeneID:79590 KEGG:hsa:79590 UCSC:uc001fpw.1
GeneCards:GC01M156707 HGNC:HGNC:14037 HPA:HPA030295 MIM:611836
neXtProt:NX_Q96A35 PharmGKB:PA30954 InParanoid:Q96A35
PhylomeDB:Q96A35 GenomeRNAi:79590 NextBio:68600 Bgee:Q96A35
CleanEx:HS_MRPL24 Genevestigator:Q96A35 Uniprot:Q96A35
Length = 216
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 47/137 (34%), Positives = 72/137 (52%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTVEA 72
W + GD V I+ GKD G+ G + +VIR +N V+V G N EA
Sbjct: 54 WYLFCGDTVEILEGKDAGKQGKVVQVIRQRNWVVVGGLNTHYRYIGKTMDYRGTMIPSEA 113
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR-TTPRPT 131
P+ V+++DP+ KP ++ ++ E G +VRV+ SG IIP+PE + P
Sbjct: 114 PLLHRQVKLVDPMDRKPTEIEWRFTEAGERVRVST---RSGRIIPKPEFPRADGIVPETW 170
Query: 132 VAGPKDTPVDLVMKKTY 148
+ GPKDT V+ +++TY
Sbjct: 171 IDGPKDTSVEDALERTY 187
>UNIPROTKB|E2QS97 [details] [associations]
symbol:MRPL24 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
Pfam:PF00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
PANTHER:PTHR12903 TIGRFAMs:TIGR01079 HAMAP:MF_01326_B
GeneTree:ENSGT00390000014542 OMA:NTHYRYV EMBL:AAEX03005314
Ensembl:ENSCAFT00000026511 Uniprot:E2QS97
Length = 219
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 48/140 (34%), Positives = 74/140 (52%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTVEA 72
W + GD V I+ GKD G+ G + +VIR +N V++EG N EA
Sbjct: 54 WHLFCGDTVEILEGKDAGKQGKVVQVIRQRNWVVLEGLNTHYRYVGKTAESRGTMIPSEA 113
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILK----IRTTP 128
P+ V+++DPV KP +V ++ E G +VRV+ SG IIP+P+ + + T
Sbjct: 114 PLLHHQVKLVDPVDRKPTEVEWRFTEAGERVRVS---SRSGRIIPKPDFPRADGIVPETW 170
Query: 129 RPTVAGPKDTPVDLVMKKTY 148
+ GPKDT V+ +++TY
Sbjct: 171 TGSTDGPKDTSVEDALERTY 190
>UNIPROTKB|Q29MA5 [details] [associations]
symbol:mRpL24 "Probable 39S ribosomal protein L24,
mitochondrial" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH379060
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
PANTHER:PTHR12903 TIGRFAMs:TIGR01079 OrthoDB:EOG405QH6
RefSeq:XP_001356724.1 ProteinModelPortal:Q29MA5 GeneID:4817158
KEGG:dpo:Dpse_GA21365 FlyBase:FBgn0081353 InParanoid:Q29MA5
OMA:RTPAKSY Uniprot:Q29MA5
Length = 247
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 48/146 (32%), Positives = 70/146 (47%)
Query: 10 IRHWKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFT 69
+ W RGD + ++ GKDKG+ G + +VI +N VIVEG N
Sbjct: 79 VEDWSFFRGDRIEVLVGKDKGKQGIVTQVIPERNWVIVEGLNWHYRRVGAEKEFPGIIIK 138
Query: 70 VEAPIHASN-VQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR--- 125
EAP+H N ++++DP + ++ E+G KVRV+ SG IIP PE
Sbjct: 139 SEAPLHVLNDIRLVDPSDLLGTEFEWRFTEEGEKVRVSM---RSGRIIPIPETNNQTHDY 195
Query: 126 TTPRPTVAGPKDTPVDLVMKKTYDAK 151
TP + KDTP +V + T+ K
Sbjct: 196 KTPNAYIEREKDTPAAVVGEITFQPK 221
>FB|FBgn0031651 [details] [associations]
symbol:mRpL24 "mitochondrial ribosomal protein L24"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=ISS] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
EMBL:AE014134 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
PANTHER:PTHR12903 TIGRFAMs:TIGR01079 CTD:79590
GeneTree:ENSGT00390000014542 HSSP:Q9RXJ1 EMBL:AY095024
RefSeq:NP_523476.1 UniGene:Dm.301 ProteinModelPortal:Q9VMY1
SMR:Q9VMY1 IntAct:Q9VMY1 MINT:MINT-853395 STRING:Q9VMY1
PaxDb:Q9VMY1 PRIDE:Q9VMY1 EnsemblMetazoa:FBtr0079058 GeneID:33703
KEGG:dme:Dmel_CG8849 FlyBase:FBgn0031651 InParanoid:Q9VMY1
OMA:GERKWRD OrthoDB:EOG405QH6 PhylomeDB:Q9VMY1 GenomeRNAi:33703
NextBio:784866 Bgee:Q9VMY1 Uniprot:Q9VMY1
Length = 247
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 48/146 (32%), Positives = 71/146 (48%)
Query: 10 IRHWKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFT 69
I W RGD + ++ GKDKG+ G + +VI +N VIVEG N
Sbjct: 79 IEDWSFFRGDRIEVLVGKDKGKQGIVTQVIPERNWVIVEGLNWHYRKVGGEKEFPGIIIK 138
Query: 70 VEAPIHAS-NVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR--- 125
EAP+H + +++++DP + ++ E+G KVRV+ SG IIP PE
Sbjct: 139 SEAPLHVTKDIRLVDPSDLQGTDFEWRFTEEGEKVRVSL---RSGRIIPIPETNNQTHDY 195
Query: 126 TTPRPTVAGPKDTPVDLVMKKTYDAK 151
TP + KDTP +V + T+ K
Sbjct: 196 KTPNAYIEREKDTPGAVVGEITFQPK 221
>GENEDB_PFALCIPARUM|PFF0245w [details] [associations]
symbol:PFF0245w "50S ribosomal subunit L24,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
GO:GO:0006412 GO:GO:0003735 EMBL:AL844505 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 HAMAP:MF_01326_B RefSeq:XP_966040.1
ProteinModelPortal:C6KSP8 EnsemblProtists:PFF0245w:mRNA
GeneID:3885712 KEGG:pfa:PFF0245w EuPathDB:PlasmoDB:PF3D7_0605000
HOGENOM:HOG000281435 OMA:FEEEINS ProtClustDB:CLSZ2432297
Uniprot:C6KSP8
Length = 194
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 47/145 (32%), Positives = 72/145 (49%)
Query: 9 LIRHWKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXF 68
+I+ WKI +GD V +I GKDKG+ G + + +N V V+G N+
Sbjct: 40 IIKMWKIRKGDEVKVISGKDKGKIGEVLSCDKFRNMVKVKGCNM------RKLFVDNKFV 93
Query: 69 TVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIRTTP 128
+E IH SNVQ++D KV +Y +D +R+++ SG++IP P K +
Sbjct: 94 YIEKKIHYSNVQLIDNFLKTNTKVALRYTDDNQVIRISK---KSGTVIPWPSE-KTKEED 149
Query: 129 RPTVA-GPKDTPVDLVMKKTYDAKS 152
+ P DT +KKTYD K+
Sbjct: 150 YDQIEENPLDTLPQEALKKTYDYKT 174
>UNIPROTKB|C6KSP8 [details] [associations]
symbol:PFF0245w "Mitochondrial ribosomal protein L24,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
GO:GO:0006412 GO:GO:0003735 EMBL:AL844505 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 HAMAP:MF_01326_B RefSeq:XP_966040.1
ProteinModelPortal:C6KSP8 EnsemblProtists:PFF0245w:mRNA
GeneID:3885712 KEGG:pfa:PFF0245w EuPathDB:PlasmoDB:PF3D7_0605000
HOGENOM:HOG000281435 OMA:FEEEINS ProtClustDB:CLSZ2432297
Uniprot:C6KSP8
Length = 194
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 47/145 (32%), Positives = 72/145 (49%)
Query: 9 LIRHWKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXF 68
+I+ WKI +GD V +I GKDKG+ G + + +N V V+G N+
Sbjct: 40 IIKMWKIRKGDEVKVISGKDKGKIGEVLSCDKFRNMVKVKGCNM------RKLFVDNKFV 93
Query: 69 TVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIRTTP 128
+E IH SNVQ++D KV +Y +D +R+++ SG++IP P K +
Sbjct: 94 YIEKKIHYSNVQLIDNFLKTNTKVALRYTDDNQVIRISK---KSGTVIPWPSE-KTKEED 149
Query: 129 RPTVA-GPKDTPVDLVMKKTYDAKS 152
+ P DT +KKTYD K+
Sbjct: 150 YDQIEENPLDTLPQEALKKTYDYKT 174
>UNIPROTKB|P60627 [details] [associations]
symbol:rplX "50S ribosomal protein L24" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0005840 EMBL:BX842574
GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 ProtClustDB:PRK00004 HAMAP:MF_01326_B
OMA:VIQAYPA PIR:F70643 RefSeq:NP_215229.1 RefSeq:NP_335160.1
RefSeq:YP_006514059.1 ProteinModelPortal:P60627 SMR:P60627
PRIDE:P60627 EnsemblBacteria:EBMYCT00000000150
EnsemblBacteria:EBMYCT00000071486 GeneID:13318604 GeneID:888421
GeneID:926033 KEGG:mtc:MT0741.1 KEGG:mtu:Rv0715 KEGG:mtv:RVBD_0715
PATRIC:18123363 TubercuList:Rv0715 Uniprot:P60627
Length = 105
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 38/102 (37%), Positives = 56/102 (54%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXX----FT 69
K+ +GD V++I GKDKG G + + +NRV+VEG N + T
Sbjct: 2 KVHKGDTVLVISGKDKGAKGKVLQAYPDRNRVLVEGVNRIKKHTAISTTQRGARSGGIVT 61
Query: 70 VEAPIHASNVQVLDPVTGKPCKVGTKYLED-GTKVRVARGIG 110
EAPIH SNV V+D GKP ++G + E+ G +VR+++ G
Sbjct: 62 QEAPIHVSNVMVVDS-DGKPTRIGYRVDEETGKRVRISKRNG 102
>TIGR_CMR|DET_0485 [details] [associations]
symbol:DET_0485 "ribosomal protein L24" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0019843 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
ProtClustDB:PRK00004 HAMAP:MF_01326_B RefSeq:YP_181229.1
ProteinModelPortal:Q3Z970 STRING:Q3Z970 GeneID:3230244
KEGG:det:DET0485 PATRIC:21608039 OMA:IAIADPK
BioCyc:DETH243164:GJNF-485-MONOMER Uniprot:Q3Z970
Length = 103
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTV-EA 72
++ + DNV++I GKDKG+TG ++ +RV+VEG N++ EA
Sbjct: 2 RLKKNDNVLVIAGKDKGKTGKVRYAFPRTDRVLVEGVNMIKRHSRARGQAKQAGIIEREA 61
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVAR 107
P+H SN+ +L KP ++G++ L DG VR +
Sbjct: 62 PLHVSNLMLLCSKCNKPARIGSRELADGKSVRYCK 96
>TIGR_CMR|GSU_2846 [details] [associations]
symbol:GSU_2846 "ribosomal protein L24" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR003256
PROSITE:PS01108 Pfam:PF00467 GO:GO:0006412 GO:GO:0005840
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
ProtClustDB:PRK00004 HAMAP:MF_01326_B RefSeq:NP_953889.1
ProteinModelPortal:P60740 GeneID:2686791 KEGG:gsu:GSU2846
PATRIC:22028539 OMA:LNIVKRH BioCyc:GSUL243231:GH27-2812-MONOMER
Uniprot:P60740
Length = 108
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 35/97 (36%), Positives = 51/97 (52%)
Query: 9 LIRHWKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXF 68
L + + I +GD V ++ GKDK +TG + R++ ++ V+VEG N+V
Sbjct: 2 LDKKFHIKKGDTVSVVTGKDKSKTGTVLRILPKRDGVLVEGLNIVKRHTRARGNEPGGIV 61
Query: 69 TVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRV 105
EAP+H SNV + KP + LEDG KVRV
Sbjct: 62 EKEAPLHVSNVMLYCGKCEKPVRAKKAILEDGKKVRV 98
>TIGR_CMR|SO_0242 [details] [associations]
symbol:SO_0242 "ribosomal protein L24" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR003256 PROSITE:PS01108 Pfam:PF00467 GO:GO:0006412
GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
HOGENOM:HOG000039892 ProtClustDB:PRK00004 HAMAP:MF_01326_B
OMA:QEAPIQA RefSeq:NP_715882.1 ProteinModelPortal:Q8EK58 SMR:Q8EK58
GeneID:1168125 KEGG:son:SO_0242 PATRIC:23520177 Uniprot:Q8EK58
Length = 104
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 40/93 (43%), Positives = 55/93 (59%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTVE-- 71
KI R D V+++ GKDKG+ + +V+ + ++IVEG NLV VE
Sbjct: 4 KIRRQDEVIVLAGKDKGKRAKVAQVLPT-GKLIVEGINLVKKHQKPNPQLGVAGGIVEKE 62
Query: 72 APIHASNVQVLDPVTGKPCKVGTKYLEDGTKVR 104
API ASNV + +PVTGK +VG ++ EDG KVR
Sbjct: 63 APIQASNVAIFNPVTGKADRVGFRF-EDGKKVR 94
>UNIPROTKB|P60624 [details] [associations]
symbol:rplX "50S ribosomal subunit protein L24"
species:83333 "Escherichia coli K-12" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
EMBL:X01563 Pfam:PF00467 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006412
EMBL:U18997 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:2.30.30.30 InterPro:IPR014722 PDB:2VHM PDBsum:2VHM PDB:2RDO
PDBsum:2RDO InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824
SMART:SM00739 eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12
PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y
PDBsum:3J11 PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS
PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB
PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO
PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV
PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N
PDB:3DF2 PDB:3DF4 PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P
PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01
PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ
PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR
PDB:4GAU PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8
PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC
PDBsum:2I2T PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO
PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI
PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1
PDBsum:2VHN PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2
PDBsum:3DF4 PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N
PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T PDBsum:3I20 PDBsum:3I22
PDBsum:3IZT PDBsum:3IZU PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR
PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ
PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S
PDBsum:3R8T PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX PDB:2VRH
PDBsum:2VRH HOGENOM:HOG000039892 ProtClustDB:PRK00004
HAMAP:MF_01326_B OMA:QEAPIQA EMBL:M10195 PIR:H65123
RefSeq:NP_417768.1 RefSeq:YP_492123.1 ProteinModelPortal:P60624
SMR:P60624 DIP:DIP-47846N IntAct:P60624 MINT:MINT-1294921
PaxDb:P60624 PRIDE:P60624 EnsemblBacteria:EBESCT00000001889
EnsemblBacteria:EBESCT00000015488 GeneID:12934409 GeneID:947810
KEGG:ecj:Y75_p3867 KEGG:eco:b3309 PATRIC:32122050 EchoBASE:EB0877
EcoGene:EG10884 BioCyc:EcoCyc:EG10884-MONOMER
BioCyc:ECOL316407:JW3271-MONOMER EvolutionaryTrace:P60624
Genevestigator:P60624 Uniprot:P60624
Length = 104
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 40/93 (43%), Positives = 52/93 (55%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTVE-- 71
KI R D V+++ GKDKG+ G +K V+ S +VIVEG NLV VE
Sbjct: 4 KIRRDDEVIVLTGKDKGKRGKVKNVL-SSGKVIVEGINLVKKHQKPVPALNQPGGIVEKE 62
Query: 72 APIHASNVQVLDPVTGKPCKVGTKYLEDGTKVR 104
A I SNV + + TGK +VG ++ EDG KVR
Sbjct: 63 AAIQVSNVAIFNAATGKADRVGFRF-EDGKKVR 94
>TIGR_CMR|CBU_0249 [details] [associations]
symbol:CBU_0249 "ribosomal protein L24" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
GO:GO:0006412 GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
HOGENOM:HOG000039892 ProtClustDB:PRK00004 HAMAP:MF_01326_B
OMA:VIQAYPA RefSeq:NP_819293.1 ProteinModelPortal:Q83ER5 SMR:Q83ER5
PRIDE:Q83ER5 GeneID:1208130 KEGG:cbu:CBU_0249 PATRIC:17929191
BioCyc:CBUR227377:GJ7S-255-MONOMER Uniprot:Q83ER5
Length = 107
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTVEAP 73
KI + D V++I G+DKG G + +V+ + +R++VEG NLV +E
Sbjct: 5 KIKKDDTVIVITGRDKGRQGKVLKVLPN-SRLLVEGINLVKKHVKPNPNKNEQGGILERE 63
Query: 74 --IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
IH SNV + +P K +VG K LEDG+KVR+ + G
Sbjct: 64 LSIHVSNVAIYNPAAKKADRVGIKTLEDGSKVRIFKSNG 102
>GENEDB_PFALCIPARUM|PFL1150c [details] [associations]
symbol:PFL1150c "ribosomal protein L24,
putative" species:5833 "Plasmodium falciparum" [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS] InterPro:IPR003256 Pfam:PF00467
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 EMBL:AE014188
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 InterPro:IPR005824 SMART:SM00739
PANTHER:PTHR12903 TIGRFAMs:TIGR01079 HAMAP:MF_01326_B
RefSeq:XP_001350636.1 ProteinModelPortal:Q8I5H8
EnsemblProtists:PFL1150c:mRNA GeneID:811282 KEGG:pfa:PFL1150c
EuPathDB:PlasmoDB:PF3D7_1223900 HOGENOM:HOG000281072 OMA:EMPIHIT
ProtClustDB:CLSZ2445030 Uniprot:Q8I5H8
Length = 227
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 35/111 (31%), Positives = 56/111 (50%)
Query: 9 LIRHWKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXF 68
L ++ I GD V ++ G DK + G + + +N V V+G N+
Sbjct: 50 LSKYLNIEVGDLVKVLYGPDKDKEGLVLSINPKRNTVTVDGCNMKKSAWNVTDNKKGSII 109
Query: 69 TVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRP 119
T E PIH +NV +LDP++ KP V +Y+ +G VR+++ SG +P P
Sbjct: 110 TQEMPIHITNVSLLDPISKKPTVVKRRYMMNGECVRISK---ISGCAMPEP 157
>UNIPROTKB|Q8I5H8 [details] [associations]
symbol:PFL1150c "Mitochondrial ribosomal protein L24-2,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR003256 Pfam:PF00467
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 EMBL:AE014188
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 InterPro:IPR005824 SMART:SM00739
PANTHER:PTHR12903 TIGRFAMs:TIGR01079 HAMAP:MF_01326_B
RefSeq:XP_001350636.1 ProteinModelPortal:Q8I5H8
EnsemblProtists:PFL1150c:mRNA GeneID:811282 KEGG:pfa:PFL1150c
EuPathDB:PlasmoDB:PF3D7_1223900 HOGENOM:HOG000281072 OMA:EMPIHIT
ProtClustDB:CLSZ2445030 Uniprot:Q8I5H8
Length = 227
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 35/111 (31%), Positives = 56/111 (50%)
Query: 9 LIRHWKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXF 68
L ++ I GD V ++ G DK + G + + +N V V+G N+
Sbjct: 50 LSKYLNIEVGDLVKVLYGPDKDKEGLVLSINPKRNTVTVDGCNMKKSAWNVTDNKKGSII 109
Query: 69 TVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRP 119
T E PIH +NV +LDP++ KP V +Y+ +G VR+++ SG +P P
Sbjct: 110 TQEMPIHITNVSLLDPISKKPTVVKRRYMMNGECVRISK---ISGCAMPEP 157
>UNIPROTKB|Q9KNZ5 [details] [associations]
symbol:rplX "50S ribosomal protein L24" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR003256 InterPro:IPR005825
PROSITE:PS01108 Pfam:PF00467 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079 ProtClustDB:PRK00004
HAMAP:MF_01326_B OMA:QEAPIQA PIR:C82058 RefSeq:NP_232213.1
ProteinModelPortal:Q9KNZ5 SMR:Q9KNZ5 PRIDE:Q9KNZ5 DNASU:2615602
GeneID:2615602 KEGG:vch:VC2585 PATRIC:20084196 Uniprot:Q9KNZ5
Length = 105
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 35/93 (37%), Positives = 52/93 (55%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTVE-- 71
KI + D V+++ GKDKG+ G + +V+ + +VIVEG NLV VE
Sbjct: 4 KIRQNDEVIVLAGKDKGKKGKVTKVLAT-GKVIVEGINLVKKHQKPVPAMGVQGGIVEQE 62
Query: 72 APIHASNVQVLDPVTGKPCKVGTKYLEDGTKVR 104
A I SN+ + + TGK ++G ++ EDG KVR
Sbjct: 63 AAIDVSNIAIFNAKTGKADRIGFRF-EDGKKVR 94
>TIGR_CMR|VC_2585 [details] [associations]
symbol:VC_2585 "ribosomal protein L24" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
ProtClustDB:PRK00004 HAMAP:MF_01326_B OMA:QEAPIQA PIR:C82058
RefSeq:NP_232213.1 ProteinModelPortal:Q9KNZ5 SMR:Q9KNZ5
PRIDE:Q9KNZ5 DNASU:2615602 GeneID:2615602 KEGG:vch:VC2585
PATRIC:20084196 Uniprot:Q9KNZ5
Length = 105
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 35/93 (37%), Positives = 52/93 (55%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTVE-- 71
KI + D V+++ GKDKG+ G + +V+ + +VIVEG NLV VE
Sbjct: 4 KIRQNDEVIVLAGKDKGKKGKVTKVLAT-GKVIVEGINLVKKHQKPVPAMGVQGGIVEQE 62
Query: 72 APIHASNVQVLDPVTGKPCKVGTKYLEDGTKVR 104
A I SN+ + + TGK ++G ++ EDG KVR
Sbjct: 63 AAIDVSNIAIFNAKTGKADRIGFRF-EDGKKVR 94
>TAIR|locus:2172154 [details] [associations]
symbol:RPL24 "plastid ribosomal protein L24" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0015934 "large
ribosomal subunit" evidence=ISS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0032544 "plastid translation" evidence=IMP] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0009941 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 EMBL:AB016879 GO:GO:0032544
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 EMBL:Y09635
EMBL:BT001990 EMBL:BT006573 EMBL:AY086810 IPI:IPI00544271
RefSeq:NP_851190.1 UniGene:At.47267 ProteinModelPortal:P92959
SMR:P92959 STRING:P92959 PaxDb:P92959 PRIDE:P92959
EnsemblPlants:AT5G54600.1 GeneID:835549 KEGG:ath:AT5G54600
GeneFarm:199 TAIR:At5g54600 eggNOG:COG0198 HOGENOM:HOG000039891
InParanoid:P92959 KO:K02895 OMA:RWERKEC PhylomeDB:P92959
ProtClustDB:CLSN2680537 Genevestigator:P92959 PANTHER:PTHR12903
TIGRFAMs:TIGR01079 Uniprot:P92959
Length = 198
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 18 GDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFT-VEAPIHA 76
GD V +I G+DKG+ G + ++ + ++++ NL +EAPIH+
Sbjct: 76 GDTVKVISGRDKGKIGEVTKIFTHNSTIVIKDVNLKTKHMKSREEGEPGQIVKIEAPIHS 135
Query: 77 SNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILK 123
SNV + +VG K LEDG KVR G I + ++LK
Sbjct: 136 SNVMLYSKEKDVVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWKLLK 182
>TIGR_CMR|ECH_0420 [details] [associations]
symbol:ECH_0420 "ribosomal protein L24" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0000315 "organellar large
ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
Pfam:PF00467 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198 KO:K02895
PANTHER:PTHR12903 TIGRFAMs:TIGR01079 HOGENOM:HOG000039892
ProtClustDB:PRK00004 HAMAP:MF_01326_B OMA:VIQAYPA
RefSeq:YP_507238.1 ProteinModelPortal:Q2GH45 STRING:Q2GH45
GeneID:3927966 KEGG:ech:ECH_0420 PATRIC:20576317
BioCyc:ECHA205920:GJNR-421-MONOMER Uniprot:Q2GH45
Length = 109
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNR------VIVEGKNLVXXXXXXXXXXXXXX 67
KI+ GD+V++I GKDKG+ G + +V++ ++ IV G N+
Sbjct: 4 KIIAGDDVIVISGKDKGKMGKVIKVLKKKHCGKDVSFAIVSGVNVCRKSVKATQKSDGGI 63
Query: 68 FTVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSII 116
+VE PI+ SN+ + D G +VG K++ + KVR + +SG +I
Sbjct: 64 ISVEKPINLSNIALFDSTLGIQTRVGYKFIGE-KKVRFMK---SSGKVI 108
>TIGR_CMR|APH_0291 [details] [associations]
symbol:APH_0291 "ribosomal protein L24" species:212042
"Anaplasma phagocytophilum HZ" [GO:0000315 "organellar large
ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0019843
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079 RefSeq:YP_504903.1
ProteinModelPortal:Q2GL48 STRING:Q2GL48 GeneID:3931200
KEGG:aph:APH_0291 PATRIC:20949156 HOGENOM:HOG000039892 OMA:DINIVTK
ProtClustDB:PRK00004 BioCyc:APHA212042:GHPM-321-MONOMER
HAMAP:MF_01326_B Uniprot:Q2GL48
Length = 104
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 33/99 (33%), Positives = 49/99 (49%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVI--VEGKNLVXXXXXXXXXXXXXXFTVE 71
KI+ GD+V++I G DKG+ G + +++R RV+ V L F++E
Sbjct: 3 KIVSGDDVIVITGSDKGKVGKVVKILRKGGRVLAKVASVALCRKSVKPSKNREGGIFSIE 62
Query: 72 APIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
I SNV D G +VG K++ DG KVR + G
Sbjct: 63 RFIDISNVAFFDSEAGVRTRVGYKFV-DGKKVRYLKSSG 100
>TIGR_CMR|SPO_0496 [details] [associations]
symbol:SPO_0496 "ribosomal protein L24" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
eggNOG:COG0198 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
HOGENOM:HOG000039892 ProtClustDB:PRK00004 HAMAP:MF_01326_B
OMA:QEAPIQA RefSeq:YP_165758.1 ProteinModelPortal:Q5LW47
GeneID:3195436 KEGG:sil:SPO0496 PATRIC:23374253 Uniprot:Q5LW47
Length = 103
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/97 (31%), Positives = 47/97 (48%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTVEAP 73
K+ +GD V+++ GKDKG+ G I V + +V+G N+ P
Sbjct: 4 KLRKGDKVVVLAGKDKGKEGTITSVDPKAGKAVVDGVNIAIRHTRQTQTSQGGRLPKALP 63
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
I SN+ +LD GK +VG + +E KVR A+ G
Sbjct: 64 IDLSNLALLDK-NGKATRVGFR-MEGDKKVRFAKTTG 98
>WB|WBGene00019076 [details] [associations]
symbol:mrpl-24 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 Pfam:PF00467 GO:GO:0005739
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0016246 GO:GO:0006412 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
PANTHER:PTHR12903 GeneTree:ENSGT00390000014542 HOGENOM:HOG000031326
OMA:NTHYRYV EMBL:FO080462 PIR:T29904 RefSeq:NP_491613.1
ProteinModelPortal:P91353 SMR:P91353 DIP:DIP-24452N IntAct:P91353
MINT:MINT-1043210 STRING:P91353 PaxDb:P91353 EnsemblMetazoa:F59A3.3
GeneID:172204 KEGG:cel:CELE_F59A3.3 UCSC:F59A3.3 CTD:172204
WormBase:F59A3.3 eggNOG:NOG325647 InParanoid:P91353 NextBio:874477
Uniprot:P91353
Length = 278
Score = 124 (48.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 44/149 (29%), Positives = 64/149 (42%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXFTV-- 70
W GD V ++ GKDKG G + R + VIV+G + T+
Sbjct: 107 WTFFPGDLVQVMVGKDKGRQGLVLTTSRDSSDVIVDGLHTKLGEDMEGSEKLGVDKTLRW 166
Query: 71 -EAPIHASNVQVL--DPVTGKPCKVGTKYLEDGTK-VRVARGIGASGSIIPRPEILKIR- 125
E P+ S QV+ DP +PC+ + G + +RV+ SG IP P K+
Sbjct: 167 QEQPLSVSKKQVMLVDPNDEQPCEARWQLNGPGDEYIRVST---RSGYEIPIPSQAKVTY 223
Query: 126 --TTPRPTV-AGPKDTPVDLVMKKTYDAK 151
P + KDTP D V+++TY K
Sbjct: 224 EYLQPENYIEVEGKDTPADAVLERTYMPK 252
>UNIPROTKB|H9KZY7 [details] [associations]
symbol:MRPL24 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR003256 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR12903 GeneTree:ENSGT00390000014542
EMBL:AADN02034595 Ensembl:ENSGALT00000021620 OMA:YIAREAP
Uniprot:H9KZY7
Length = 95
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 81 VLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIRT--TPRPTVAGPKDT 138
++DP KP +V +Y E+G +VRV+ +G IIP P + + R P + GPKDT
Sbjct: 1 LVDPEDRKPTEVDWRYTEEGERVRVSL---RTGRIIPLP-LWQRRDGIVPEQWIDGPKDT 56
Query: 139 PVDLVMKKTY 148
VD + KTY
Sbjct: 57 SVDDALDKTY 66
>TIGR_CMR|CJE_1864 [details] [associations]
symbol:CJE_1864 "ribosomal protein L24" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR003256 InterPro:IPR005825 PROSITE:PS01108
Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739 eggNOG:COG0198
HOGENOM:HOG000039891 KO:K02895 PANTHER:PTHR12903 TIGRFAMs:TIGR01079
HAMAP:MF_01326_B RefSeq:YP_179834.1 ProteinModelPortal:Q5HSA1
SMR:Q5HSA1 STRING:Q5HSA1 GeneID:3232491 KEGG:cjr:CJE1864
PATRIC:20045560 OMA:EGSIHAS ProtClustDB:PRK12281
BioCyc:CJEJ195099:GJC0-1903-MONOMER Uniprot:Q5HSA1
Length = 77
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVXXXXXXXXXXXXXXF-TVEA 72
KI +GD+V +I G DKG+TG + V +V+VEG + F E
Sbjct: 6 KIKKGDSVKVITGDDKGKTGKVLAVYPKTLKVVVEGCKIAKKAIKPSEKNPNGGFINKEM 65
Query: 73 PIHASNV 79
P+ SNV
Sbjct: 66 PMDISNV 72
>TIGR_CMR|NSE_0277 [details] [associations]
symbol:NSE_0277 "ribosomal protein L24" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR003256
InterPro:IPR005825 PROSITE:PS01108 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 EMBL:CP000237 GenomeReviews:CP000237_GR
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 InterPro:IPR005824 SMART:SM00739
HOGENOM:HOG000039891 KO:K02895 TIGRFAMs:TIGR01079
ProtClustDB:PRK00004 HAMAP:MF_01326_B RefSeq:YP_506168.1
ProteinModelPortal:Q2GEC8 STRING:Q2GEC8 GeneID:3931698
KEGG:nse:NSE_0277 PATRIC:22680647 eggNOG:NOG292194 OMA:FKRTAEF
BioCyc:NSEN222891:GHFU-304-MONOMER Uniprot:Q2GEC8
Length = 104
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 32/99 (32%), Positives = 48/99 (48%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVI------RSQNRVIVEGKNLVXXXXXXXXXXXXXX 67
+I+ GD V +I G + G+ G +++V+ R + VIV N+
Sbjct: 3 RIVSGDQVKVISGNEAGKVGVVRKVLYSSVGRRKEVYVIVSDVNV---RRFVKKTQAGKK 59
Query: 68 FTVEA-PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRV 105
F ++ PI SNV +L G KVG K L+DGTK R+
Sbjct: 60 FDAKSYPIAVSNVALLAG-DGFVSKVGFK-LKDGTKKRI 96
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.137 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 159 145 0.00071 103 3 11 22 0.49 31
30 0.49 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 560 (60 KB)
Total size of DFA: 126 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.16u 0.19s 13.35t Elapsed: 00:00:01
Total cpu time: 13.16u 0.19s 13.35t Elapsed: 00:00:01
Start: Sat May 11 03:22:20 2013 End: Sat May 11 03:22:21 2013