BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031473
(159 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q47LK4|RL24_THEFY 50S ribosomal protein L24 OS=Thermobifida fusca (strain YX) GN=rplX
PE=3 SV=1
Length = 101
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 71/100 (71%), Gaps = 4/100 (4%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGE--GHEGGIFTV 70
KI +GD V++I GKDKG TG +K+ + + RVIVEG NL+KKH K + G +G + T+
Sbjct: 1 MKIKKGDEVIVIAGKDKGATGKVKKALPKEQRVIVEGVNLIKKHKKANQAGGQQGEVVTL 60
Query: 71 EAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
EAPIH SNV +L+ G+P +VG ++ EDGTKVR++R G
Sbjct: 61 EAPIHVSNVALLED--GRPTRVGYRFKEDGTKVRISRRTG 98
>sp|B9DM36|RL24_STACT 50S ribosomal protein L24 OS=Staphylococcus carnosus (strain TM300)
GN=rplX PE=3 SV=1
Length = 105
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 71/97 (73%), Gaps = 2/97 (2%)
Query: 15 ILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAP 73
I +GDNV++I GKDKG+TG ++ ++RV+VEG N++KKH K + + EGGI EAP
Sbjct: 3 IKKGDNVIVISGKDKGKTGVVQSTEPKKDRVVVEGVNIIKKHQKPTQFNPEGGILETEAP 62
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
IH SNVQ+LDP T +P +VG K++ DG K+R+A+ G
Sbjct: 63 IHVSNVQLLDPKTNEPTRVGYKFV-DGKKIRIAKKSG 98
>sp|B6IRR7|RL24_RHOCS 50S ribosomal protein L24 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rplX PE=3 SV=1
Length = 105
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 69/103 (66%), Gaps = 3/103 (2%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVEAP 73
KI + D V+++ GKDKG+TG + V+ +NRV V G NLVKKH + +GGI +EA
Sbjct: 4 KIRKNDRVVVLTGKDKGKTGEVIEVLPKENRVKVRGVNLVKKHQRPTPTQQGGIVEIEAA 63
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSII 116
+H SNV +DP T KP +VG K LEDG KVRVA+ ASG II
Sbjct: 64 LHVSNVAHIDPKTSKPTRVGFKTLEDGRKVRVAK---ASGEII 103
>sp|A8LC45|RL24_FRASN 50S ribosomal protein L24 OS=Frankia sp. (strain EAN1pec) GN=rplX
PE=3 SV=1
Length = 108
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 67/103 (65%), Gaps = 4/103 (3%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEG----HEGGIF 68
KI +GD V I+ GKD+G G + R I QN+V+VEG N V +H + + GGI
Sbjct: 4 MKIKKGDTVQIVTGKDRGLKGKVIRAIPDQNKVVVEGANRVTRHTRVQQSSRGSQSGGIV 63
Query: 69 TVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGA 111
T EAPIH SNV ++DP G+P +VG ++ +DGTKVR++R GA
Sbjct: 64 TQEAPIHVSNVMIVDPSDGRPTRVGYRFNDDGTKVRISRRTGA 106
>sp|A9VP88|RL24_BACWK 50S ribosomal protein L24 OS=Bacillus weihenstephanensis (strain
KBAB4) GN=rplX PE=3 SV=1
Length = 103
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV VLDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMVLDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|Q6HPP7|RL24_BACHK 50S ribosomal protein L24 OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=rplX PE=3 SV=1
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|Q63H79|RL24_BACCZ 50S ribosomal protein L24 OS=Bacillus cereus (strain ZK / E33L)
GN=rplX PE=3 SV=1
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|Q81J31|RL24_BACCR 50S ribosomal protein L24 OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=rplX PE=3 SV=1
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|B9IZK5|RL24_BACCQ 50S ribosomal protein L24 OS=Bacillus cereus (strain Q1) GN=rplX
PE=3 SV=1
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|B7HQV5|RL24_BACC7 50S ribosomal protein L24 OS=Bacillus cereus (strain AH187) GN=rplX
PE=3 SV=1
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|B7HJ59|RL24_BACC4 50S ribosomal protein L24 OS=Bacillus cereus (strain B4264) GN=rplX
PE=3 SV=1
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|C1ET50|RL24_BACC3 50S ribosomal protein L24 OS=Bacillus cereus (strain 03BB102)
GN=rplX PE=3 SV=1
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|B7IT30|RL24_BACC2 50S ribosomal protein L24 OS=Bacillus cereus (strain G9842) GN=rplX
PE=3 SV=1
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|Q73F85|RL24_BACC1 50S ribosomal protein L24 OS=Bacillus cereus (strain ATCC 10987)
GN=rplX PE=3 SV=1
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|B7JKD0|RL24_BACC0 50S ribosomal protein L24 OS=Bacillus cereus (strain AH820) GN=rplX
PE=3 SV=1
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|Q81VR9|RL24_BACAN 50S ribosomal protein L24 OS=Bacillus anthracis GN=rplX PE=3 SV=1
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|A0R8J1|RL24_BACAH 50S ribosomal protein L24 OS=Bacillus thuringiensis (strain Al
Hakam) GN=rplX PE=3 SV=2
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|C3LJ93|RL24_BACAC 50S ribosomal protein L24 OS=Bacillus anthracis (strain CDC 684 /
NRRL 3495) GN=rplX PE=3 SV=1
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|C3P9R6|RL24_BACAA 50S ribosomal protein L24 OS=Bacillus anthracis (strain A0248)
GN=rplX PE=3 SV=1
Length = 103
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I QNRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV +LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMILDPKTGEPTRVGFK-VEDGKKVRIAKKSG 98
>sp|A7IPQ9|RL24_XANP2 50S ribosomal protein L24 OS=Xanthobacter autotrophicus (strain
ATCC BAA-1158 / Py2) GN=rplX PE=3 SV=1
Length = 105
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 66/97 (68%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVEAP 73
KI +GD V+++ G+DKG TG + +V+ + R +V G N+VK+H + EGGI + EAP
Sbjct: 4 KIKKGDKVVVLTGRDKGRTGEVIQVMPKEERALVRGVNIVKRHQRQTANQEGGIISKEAP 63
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
I SNV V DP GKP +VG + LEDGTKVRVA+ G
Sbjct: 64 IQLSNVAVADPKDGKPTRVGFQVLEDGTKVRVAKRSG 100
>sp|C4KZN5|RL24_EXISA 50S ribosomal protein L24 OS=Exiguobacterium sp. (strain ATCC
BAA-1283 / AT1b) GN=rplX PE=3 SV=1
Length = 102
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Query: 15 ILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAP 73
+ +GD V ++ GKDKG+ G I + + S+NRV+VEG N++KKH K + + +GGI +EAP
Sbjct: 3 VKKGDTVQVMSGKDKGKQGVILKAMPSKNRVVVEGVNVMKKHAKPSQANPQGGILEIEAP 62
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVAR 107
IH SNV LDP TGKP +VG K + DG KVRVA+
Sbjct: 63 IHVSNVMPLDPKTGKPTRVGFKVV-DGKKVRVAK 95
>sp|B2G8W7|RL24_LACRJ 50S ribosomal protein L24 OS=Lactobacillus reuteri (strain JCM
1112) GN=rplX PE=3 SV=1
Length = 102
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 15 ILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAP 73
I GD V +I GKDKG+ G IK+V+ SQNRVIVEG N+VKKH K + GG+ EA
Sbjct: 3 IKTGDKVRVIAGKDKGKEGTIKKVLASQNRVIVEGVNIVKKHQKPSNSNPNGGVIDTEAA 62
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 112
I+ASNV ++DP T +P +VG K++ DG KVRVA+ G +
Sbjct: 63 INASNVMLIDPSTNEPTRVGYKFV-DGKKVRVAKKSGKT 100
>sp|A5VLJ4|RL24_LACRD 50S ribosomal protein L24 OS=Lactobacillus reuteri (strain DSM
20016) GN=rplX PE=3 SV=1
Length = 102
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 15 ILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAP 73
I GD V +I GKDKG+ G IK+V+ SQNRVIVEG N+VKKH K + GG+ EA
Sbjct: 3 IKTGDKVRVIAGKDKGKEGTIKKVLASQNRVIVEGVNIVKKHQKPSNSNPNGGVIDTEAA 62
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 112
I+ASNV ++DP T +P +VG K++ DG KVRVA+ G +
Sbjct: 63 INASNVMLIDPSTNEPTRVGYKFV-DGKKVRVAKKSGKT 100
>sp|A0L5Y4|RL24_MAGSM 50S ribosomal protein L24 OS=Magnetococcus sp. (strain MC-1)
GN=rplX PE=3 SV=1
Length = 112
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 65/94 (69%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVEAPIHA 76
+GD V+++ GKDKG+ G I +V+ ++ V+VE N++K+H K + EGGI EAPIH
Sbjct: 14 KGDTVIVVAGKDKGKQGQILQVLGKKSSVLVEKVNMIKRHTKPAQNREGGIVEKEAPIHI 73
Query: 77 SNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV ++DP TGK ++ K LEDG KVRVA G G
Sbjct: 74 SNVMIVDPATGKATRIKKKNLEDGRKVRVAAGSG 107
>sp|Q11HR3|RL24_MESSB 50S ribosomal protein L24 OS=Mesorhizobium sp. (strain BNC1)
GN=rplX PE=3 SV=1
Length = 104
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVEA 72
KI +GD V+++ G+DKG TG + +++ ++R +V G NLV++H K EGGI T EA
Sbjct: 2 QKIKKGDKVVVLSGRDKGRTGEVLKMMPKEDRALVRGVNLVRRHQKQTPQAEGGIITKEA 61
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSII 116
PIH SN+ + DP GKP +VG K EDG KVRVA+ SG +I
Sbjct: 62 PIHVSNLALADPKDGKPTRVGFKIQEDGKKVRVAK---RSGELI 102
>sp|Q2JFG5|RL24_FRASC 50S ribosomal protein L24 OS=Frankia sp. (strain CcI3) GN=rplX PE=3
SV=1
Length = 108
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEG----HEGGIF 68
KI +GD V II GKD+G G + R QN+V+VEG N + +H + +G GGI
Sbjct: 4 LKIKKGDTVQIITGKDRGLKGKVIRAYPEQNKVLVEGANRITRHTRVQQGTRGSQSGGII 63
Query: 69 TVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGA 111
T EAPIH SNV ++DP GKP ++G + +DGTKVRV+R G
Sbjct: 64 TQEAPIHVSNVMIVDPSDGKPTRIGYRINDDGTKVRVSRRTGT 106
>sp|B9E9K2|RL24_MACCJ 50S ribosomal protein L24 OS=Macrococcus caseolyticus (strain
JCSC5402) GN=rplX PE=3 SV=1
Length = 102
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 72/103 (69%), Gaps = 5/103 (4%)
Query: 15 ILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAP 73
I +GD V++I GKDKG+TG + + ++RV+VEG N+VKKH K + + EGGI EA
Sbjct: 3 IKKGDKVIVITGKDKGKTGTVIEALPKRDRVVVEGVNIVKKHQKPTQMNPEGGITEFEAA 62
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSII 116
IH SNV +LDP T KP +VGTK +EDG KVRVA+ SG II
Sbjct: 63 IHVSNVMLLDPKTNKPTRVGTK-IEDGKKVRVAK---KSGEII 101
>sp|Q9CQ06|RM24_MOUSE 39S ribosomal protein L24, mitochondrial OS=Mus musculus GN=Mrpl24
PE=2 SV=1
Length = 216
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVEA 72
W + GD V I+ GKD G+ G + +V+R +N V++EG N ++I + H G + EA
Sbjct: 54 WHLFCGDMVEILEGKDAGKQGKVVQVVRQRNWVVLEGLNTHYRYIGRTKDHRGTMIASEA 113
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR-TTPRPT 131
P+ V+++DPV KP ++ ++ E G +VRV+ SG IIP+PE + P
Sbjct: 114 PLLHHQVKLVDPVDRKPTEIQWRFTEAGERVRVS---TRSGRIIPKPEFPRADGIVPETW 170
Query: 132 VAGPKDTPVDLVMKKTY 148
GPKDT V+ +++TY
Sbjct: 171 TDGPKDTSVEDALERTY 187
>sp|Q0RRR0|RL24_FRAAA 50S ribosomal protein L24 OS=Frankia alni (strain ACN14a) GN=rplX
PE=3 SV=1
Length = 110
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEG----HEGGIF 68
KI +GD V II GKD+G G + R QN+V+VEG N + +H + + GGI
Sbjct: 6 LKIKKGDTVQIITGKDRGLKGKVIRAYPEQNKVLVEGANRITRHTRVQQSARGSQSGGIV 65
Query: 69 TVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGA 111
T EAPIH SNV ++DP G+P ++G + EDGTKVR++R GA
Sbjct: 66 TQEAPIHVSNVMIVDPSDGRPTRIGYRINEDGTKVRISRRTGA 108
>sp|Q03PW8|RL24_LACBA 50S ribosomal protein L24 OS=Lactobacillus brevis (strain ATCC 367
/ JCM 1170) GN=rplX PE=3 SV=1
Length = 103
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 15 ILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAP 73
I GD V +I GKDKG+ G + +V+ ++NRVIV+G N++KKH K + + +GGI +EAP
Sbjct: 3 IKTGDKVRVIAGKDKGKEGTVSKVLNAKNRVIVQGVNMIKKHQKASQTNPQGGIIDIEAP 62
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 112
IHASNV ++DP +P ++G + +EDG KVR A+ G +
Sbjct: 63 IHASNVMLIDPSNNEPTRLGVR-VEDGHKVRFAKKSGET 100
>sp|A8IAQ5|RL24_AZOC5 50S ribosomal protein L24 OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=rplX PE=3 SV=1
Length = 106
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 66/97 (68%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVEAP 73
KI +GD V+++ G+DKG TG + +V+ + R +V G N+VK+H + EGGI + EAP
Sbjct: 5 KIKKGDKVVVLAGRDKGRTGEVLQVLPKEERALVRGVNVVKRHQRQTAQSEGGIISKEAP 64
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
IH SN+ V DP GKP +VG + L+DG KVRVA+ G
Sbjct: 65 IHLSNIAVADPKDGKPTRVGFEVLDDGRKVRVAKRSG 101
>sp|Q66H47|RM24_RAT 39S ribosomal protein L24, mitochondrial OS=Rattus norvegicus
GN=Mrpl24 PE=2 SV=1
Length = 216
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVEA 72
W + GD V I+ GKD G+ G + +V+R +N V++EG N ++I + H G + EA
Sbjct: 54 WHLFCGDMVEILEGKDAGKQGKVVQVVRQRNWVVLEGLNTHYRYIGRTKDHRGTMIPSEA 113
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR-TTPRPT 131
P+ V+++DPV KP ++ ++ E G +VRV+ SG IIP+PE + P
Sbjct: 114 PLLHHQVKLVDPVDRKPTEIQWRFTEAGERVRVS---TRSGRIIPKPEFPRADGIVPETW 170
Query: 132 VAGPKDTPVDLVMKKTY 148
GPKDT V+ +++TY
Sbjct: 171 TDGPKDTSVEDALERTY 187
>sp|B1MW03|RL24_LEUCK 50S ribosomal protein L24 OS=Leuconostoc citreum (strain KM20)
GN=rplX PE=3 SV=1
Length = 102
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 2/94 (2%)
Query: 18 GDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIK-GGEGHEGGIFTVEAPIHA 76
GD V +I GKDKG+ G I + + ++RV+VEG N+VKKH K E +GG+ +EAPIH
Sbjct: 6 GDKVRVIAGKDKGKEGTITKTVAGKDRVVVEGVNIVKKHQKPSNEYPQGGVIDIEAPIHV 65
Query: 77 SNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNVQ+LDP T +P KV K +EDG KVRV++ G
Sbjct: 66 SNVQLLDPSTNEPTKVAFK-IEDGKKVRVSKKSG 98
>sp|A7GK31|RL24_BACCN 50S ribosomal protein L24 OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=rplX PE=3 SV=1
Length = 103
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
Query: 17 RGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIH 75
+GD V +I GKDKG+ G I +NRVIVEG N+VKKH K + + +GGI T EAPIH
Sbjct: 5 KGDKVQVITGKDKGKQGVILVAFPKENRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIH 64
Query: 76 ASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNV LDP TG+P +VG K +EDG KVR+A+ G
Sbjct: 65 VSNVMPLDPKTGEPTRVGYK-VEDGKKVRIAKKSG 98
>sp|Q03ZN4|RL24_LEUMM 50S ribosomal protein L24 OS=Leuconostoc mesenteroides subsp.
mesenteroides (strain ATCC 8293 / NCDO 523) GN=rplX PE=3
SV=1
Length = 102
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
Query: 18 GDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIK-GGEGHEGGIFTVEAPIHA 76
GD V +I GKDKG+ G I + + ++RV+VEG N+VKKH K E +GG+ +EAPIH
Sbjct: 6 GDKVRVIAGKDKGKEGTITKTVAGKDRVVVEGVNIVKKHQKPSNEYPQGGVIDIEAPIHV 65
Query: 77 SNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
SNVQ+LDP T +P +VG K +EDG K+RV++ G
Sbjct: 66 SNVQLLDPSTNEPTRVGFK-VEDGKKIRVSKKSG 98
>sp|Q6GPM4|RM24_XENLA Probable 39S ribosomal protein L24, mitochondrial OS=Xenopus laevis
GN=mrpl24 PE=2 SV=1
Length = 216
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 6/139 (4%)
Query: 12 HWKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVE 71
W+ RGD V ++ GKD G+ G + +V+R++N V+V+G N +++ + + G E
Sbjct: 53 EWQYFRGDTVEVLHGKDAGKQGKVTQVVRARNWVVVDGLNTHFRYVGRTDEYRGTYVASE 112
Query: 72 APIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIRT--TPR 129
P+ + V ++DP KP ++ +Y E+G +VRV+ SG IIP+P +L+ R P
Sbjct: 113 GPLLLNQVSLIDPTDRKPTEIEWRYTEEGERVRVS---ARSGRIIPKP-VLQRRDGIIPE 168
Query: 130 PTVAGPKDTPVDLVMKKTY 148
GPKDT V+ +++TY
Sbjct: 169 QWKDGPKDTSVEDALERTY 187
>sp|Q1AU40|RL24_RUBXD 50S ribosomal protein L24 OS=Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129) GN=rplX PE=3 SV=2
Length = 105
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 68/97 (70%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVEAP 73
KI RGD V++I G++KG+ G ++RV+ +NRV+V+G N +H + + + G++ +AP
Sbjct: 4 KIKRGDTVVVISGREKGKRGEVERVLPRENRVVVKGVNTRTRHARPSQQNPDGLYRFDAP 63
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
IH SNV ++DP TG+P +VG ++ E G KVRVA+ G
Sbjct: 64 IHISNVMLVDPNTGEPTRVGYRFTESGQKVRVAKRSG 100
>sp|B8IS96|RL24_METNO 50S ribosomal protein L24 OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=rplX PE=3 SV=1
Length = 105
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVEAP 73
K+ +GD V+++ G+DKG +G + +V+ +NR +V G NLVK+H + + EGGI + EA
Sbjct: 4 KVKKGDTVVVLTGRDKGRSGEVIQVMPKENRALVRGVNLVKRHQRQTQAQEGGIISKEAA 63
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSII 116
I SN+ V DP GKP +VG + LEDG KVR A+ SG +I
Sbjct: 64 IDLSNLAVADPKDGKPTRVGFRILEDGRKVRFAK---RSGDLI 103
>sp|A7HWS2|RL24_PARL1 50S ribosomal protein L24 OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=rplX PE=3 SV=1
Length = 105
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVEAP 73
KI +GD V+I+ GKDKG+ G + V +N+ +V+G N+VK+H K + GGI T EA
Sbjct: 4 KIKKGDKVVILTGKDKGKKGDVVAVFPKENKALVQGVNMVKRHEKPSQTATGGIVTREAK 63
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSII 116
+H SN+ + DP TG P +VG K L+DG KVR A+ ASG I
Sbjct: 64 VHLSNIAIQDPKTGAPTRVGFKTLDDGRKVRFAK---ASGETI 103
>sp|Q9ZCR6|RL24_RICPR 50S ribosomal protein L24 OS=Rickettsia prowazekii (strain Madrid
E) GN=rplX PE=3 SV=1
Length = 113
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 70/104 (67%), Gaps = 3/104 (2%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVEA 72
K+ +GD V+II GK KG+ G + +V +N V+V G NLVKKH K + EGGI T E+
Sbjct: 4 LKVKKGDEVVIITGKYKGKKGKVLKVFPEENTVVVSGVNLVKKHTKPNKMSEGGIITQES 63
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSII 116
PIH SN+ +DP TG P KV K+LEDG+KVRVA+ SG II
Sbjct: 64 PIHISNIAHIDPKTGNPTKVAFKFLEDGSKVRVAK---KSGEII 104
>sp|Q03EC7|RL24_PEDPA 50S ribosomal protein L24 OS=Pediococcus pentosaceus (strain ATCC
25745 / 183-1w) GN=rplX PE=3 SV=1
Length = 103
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Query: 18 GDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAPIHA 76
GD V +I GKDKG+ G IK+ + +NRV+VEG N++KKH K + +GGI VEAP+
Sbjct: 6 GDKVRVISGKDKGKEGTIKQTLAKKNRVVVEGLNMIKKHQKPNNANPQGGILDVEAPMDV 65
Query: 77 SNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 112
SNV ++DP T +P +VG K + DG KVRV++ G S
Sbjct: 66 SNVMLIDPSTNEPTRVGFKTV-DGKKVRVSKKSGES 100
>sp|B3WAK6|RL24_LACCB 50S ribosomal protein L24 OS=Lactobacillus casei (strain BL23)
GN=rplX PE=3 SV=1
Length = 103
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVE 71
K GD V ++RGKD G+ G I +V++ ++V+VEG N++KKH K + +GGI E
Sbjct: 1 MKFKTGDKVRVMRGKDAGKEGQITKVLKDADKVVVEGINMIKKHQKPNNANPQGGIIDKE 60
Query: 72 APIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 112
APIH SNV +LDP T KP ++G++ ++DG KVR+A+ G +
Sbjct: 61 APIHVSNVMLLDPDTNKPTRIGSE-VKDGNKVRIAKKSGTA 100
>sp|Q034Z4|RL24_LACC3 50S ribosomal protein L24 OS=Lactobacillus casei (strain ATCC 334)
GN=rplX PE=3 SV=1
Length = 103
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVE 71
K GD V ++RGKD G+ G I +V++ ++V+VEG N++KKH K + +GGI E
Sbjct: 1 MKFKTGDKVRVMRGKDAGKEGQITKVLKDADKVVVEGINMIKKHQKPNNANPQGGIIDKE 60
Query: 72 APIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGAS 112
APIH SNV +LDP T KP ++G++ ++DG KVR+A+ G +
Sbjct: 61 APIHVSNVMLLDPDTNKPTRIGSE-VKDGNKVRIAKKSGTA 100
>sp|Q3SYS0|RM24_BOVIN 39S ribosomal protein L24, mitochondrial OS=Bos taurus GN=MRPL24
PE=1 SV=1
Length = 216
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 80/137 (58%), Gaps = 4/137 (2%)
Query: 13 WKILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVEA 72
W + GD V I+ GKD G+ G + +VIR +N V+VEG N +++ G + EA
Sbjct: 54 WHLFCGDRVEILEGKDAGKQGKVVQVIRQRNWVVVEGLNTHYRYVGKTVDFRGTMVPSEA 113
Query: 73 PIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSIIPRPEILKIR-TTPRPT 131
P+ + V+++DP+ KP +V ++ E G +VRV+ SG IIP+P++ + P
Sbjct: 114 PLLHNQVKLVDPMDRKPTEVEWRFTEAGERVRVS---TRSGRIIPKPDVPRADGIVPETW 170
Query: 132 VAGPKDTPVDLVMKKTY 148
+ GPKDT V+ ++KTY
Sbjct: 171 IDGPKDTSVEDALEKTY 187
>sp|B2IK73|RL24_BEII9 50S ribosomal protein L24 OS=Beijerinckia indica subsp. indica
(strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplX PE=3
SV=1
Length = 105
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
Query: 14 KILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGHEGGIFTVEAP 73
KI +GD V+++ G+DKG +G + +V+ ++R +V G NLVK+H + E GI+T EA
Sbjct: 4 KIKKGDKVVVLAGRDKGRSGEVLQVLPKEDRALVRGINLVKRHQRQTAKQEAGIYTKEAT 63
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIGASGSII 116
IH SN+ + DP GK +VG K LEDG KVR A+ SG +I
Sbjct: 64 IHLSNLALADPKDGKATRVGFKILEDGRKVRFAK---HSGDVI 103
>sp|P60736|RL24_STAAW 50S ribosomal protein L24 OS=Staphylococcus aureus (strain MW2)
GN=rplX PE=3 SV=1
Length = 105
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Query: 15 ILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAP 73
I +GDNV +I GKDKG+ G + + ++RV+VEG N++KKH K + + EGGI EA
Sbjct: 3 IKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVVEGVNIMKKHQKPTQLNPEGGILETEAA 62
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
IH SNVQ+LDP T +P +VG K++ DG KVR+A+ G
Sbjct: 63 IHVSNVQLLDPKTNEPTRVGYKFV-DGKKVRIAKKSG 98
>sp|A8Z346|RL24_STAAT 50S ribosomal protein L24 OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=rplX PE=3 SV=1
Length = 105
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Query: 15 ILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAP 73
I +GDNV +I GKDKG+ G + + ++RV+VEG N++KKH K + + EGGI EA
Sbjct: 3 IKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVVEGVNIMKKHQKPTQLNPEGGILETEAA 62
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
IH SNVQ+LDP T +P +VG K++ DG KVR+A+ G
Sbjct: 63 IHVSNVQLLDPKTNEPTRVGYKFV-DGKKVRIAKKSG 98
>sp|Q6G782|RL24_STAAS 50S ribosomal protein L24 OS=Staphylococcus aureus (strain MSSA476)
GN=rplX PE=3 SV=1
Length = 105
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Query: 15 ILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAP 73
I +GDNV +I GKDKG+ G + + ++RV+VEG N++KKH K + + EGGI EA
Sbjct: 3 IKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVVEGVNIMKKHQKPTQLNPEGGILETEAA 62
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
IH SNVQ+LDP T +P +VG K++ DG KVR+A+ G
Sbjct: 63 IHVSNVQLLDPKTNEPTRVGYKFV-DGKKVRIAKKSG 98
>sp|Q6GEJ4|RL24_STAAR 50S ribosomal protein L24 OS=Staphylococcus aureus (strain MRSA252)
GN=rplX PE=3 SV=1
Length = 105
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Query: 15 ILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAP 73
I +GDNV +I GKDKG+ G + + ++RV+VEG N++KKH K + + EGGI EA
Sbjct: 3 IKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVVEGVNIMKKHQKPTQLNPEGGILETEAA 62
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
IH SNVQ+LDP T +P +VG K++ DG KVR+A+ G
Sbjct: 63 IHVSNVQLLDPKTNEPTRVGYKFV-DGKKVRIAKKSG 98
>sp|P60735|RL24_STAAN 50S ribosomal protein L24 OS=Staphylococcus aureus (strain N315)
GN=rplX PE=1 SV=1
Length = 105
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Query: 15 ILRGDNVMIIRGKDKGETGAIKRVIRSQNRVIVEGKNLVKKHIKGGEGH-EGGIFTVEAP 73
I +GDNV +I GKDKG+ G + + ++RV+VEG N++KKH K + + EGGI EA
Sbjct: 3 IKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVVEGVNIMKKHQKPTQLNPEGGILETEAA 62
Query: 74 IHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVARGIG 110
IH SNVQ+LDP T +P +VG K++ DG KVR+A+ G
Sbjct: 63 IHVSNVQLLDPKTNEPTRVGYKFV-DGKKVRIAKKSG 98
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.138 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,137,478
Number of Sequences: 539616
Number of extensions: 2901913
Number of successful extensions: 8532
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 6676
Number of HSP's gapped (non-prelim): 890
length of query: 159
length of database: 191,569,459
effective HSP length: 108
effective length of query: 51
effective length of database: 133,290,931
effective search space: 6797837481
effective search space used: 6797837481
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)