BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031480
(159 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M5M1|RS11_EUPES 40S ribosomal protein S11 OS=Euphorbia esula GN=RPS11 PE=2 SV=1
Length = 159
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/159 (95%), Positives = 157/159 (98%)
Query: 1 MAEQTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
MAEQTEKAFLKQPKVFL+SKK GKGKRPGKGGNRFWKSIGLGFKTPREAI+GTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCP 60
Query: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 159
GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG KKAFTA+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTAI 159
>sp|P17093|RS11_SOYBN 40S ribosomal protein S11 OS=Glycine max GN=RPS11 PE=2 SV=2
Length = 159
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/159 (95%), Positives = 154/159 (96%)
Query: 1 MAEQTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
MAEQTEKAFLKQPKVFLS+KK GKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
FTG VSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAHISP FRVKE
Sbjct: 61 FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKE 120
Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 159
GDHVIIGQCRPLSKTVRFNVLKVIPAGSS GAKKAFT M
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
>sp|P42733|RS113_ARATH 40S ribosomal protein S11-3 OS=Arabidopsis thaliana GN=RPS11C PE=2
SV=2
Length = 159
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/159 (91%), Positives = 151/159 (94%)
Query: 1 MAEQTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
MAEQTEKAFLKQPKVFLSSK +GKGKRPGKGGNRFWK+IGLGFKTPREAI+G YID KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60
Query: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
FTGTVSIRGRILAGTCHSAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 159
GDHVIIGQCRPLSKTVRFNVLKVIPAG+S KKAFT +
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159
>sp|P16181|RS111_ARATH 40S ribosomal protein S11-1 OS=Arabidopsis thaliana GN=RPS11A PE=2
SV=1
Length = 160
Score = 276 bits (705), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 146/160 (91%), Positives = 153/160 (95%), Gaps = 1/160 (0%)
Query: 1 MAEQTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
MAEQTEKAFLKQPKVFLSSKK+GKGKRPGKGGNRFWK+IGLGFKTPREAI+G Y+DKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60
Query: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
FTGTVSIRGRILAGTCHSAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG-AKKAFTAM 159
GDH+IIGQCRPLSKTVRFNVLKVIPAGSS KKAFT M
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160
>sp|O65569|RS112_ARATH 40S ribosomal protein S11-2 OS=Arabidopsis thaliana GN=RPS11B PE=2
SV=2
Length = 159
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/159 (91%), Positives = 152/159 (95%)
Query: 1 MAEQTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
MAEQTEKAFLKQPKVFLSSKK+GKGKRPGKGGNRFWK+IGLGFKTPREAIEGTYID+KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCP 60
Query: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
FTGTVSIRGRIL+GTCHSAKM RTIIVRR+YLHFVKKY+RYEKRHSNIPAH+SPCFRVKE
Sbjct: 61 FTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKE 120
Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 159
GD V IGQCRPLSKTVRFNVLKVIPAGSS KKAFT M
Sbjct: 121 GDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159
>sp|P25460|RS11_MAIZE 40S ribosomal protein S11 OS=Zea mays GN=RPS11 PE=2 SV=1
Length = 159
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 150/158 (94%), Positives = 155/158 (98%)
Query: 1 MAEQTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
MAEQTEKAFLKQPKVFLSSKK+GKGK+PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 158
GDHVIIGQCRPLSKTVRFNV+KVIPAGS+ KKAFTA
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVVKVIPAGSAAAGKKAFTA 158
>sp|P42756|RS11_DUNTE 40S ribosomal protein S11 OS=Dunaliella tertiolecta GN=RPS11 PE=2
SV=1
Length = 157
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/160 (68%), Positives = 132/160 (82%), Gaps = 4/160 (2%)
Query: 1 MAEQTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
MAEQTEKAF KQ V K+ + K PGK G+RF+K++GL FKTP+EAI+G Y+DKKCP
Sbjct: 1 MAEQTEKAFQKQVGV-TGCFKSKEKKAPGKSGHRFFKNVGLNFKTPKEAIDGNYVDKKCP 59
Query: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
FTG VSIRGRIL G S+KM RTIIVRR+YLHF+ KY RYEKRH+NIPAH+SPCFRV++
Sbjct: 60 FTGNVSIRGRILTGVVKSSKMMRTIIVRRDYLHFIPKYARYEKRHTNIPAHVSPCFRVRD 119
Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIP-AGSSGGAKKAFTAM 159
GD VIIGQCRPLSKT+RFNVL+VIP AG++G KK+F+
Sbjct: 120 GDTVIIGQCRPLSKTIRFNVLRVIPQAGATG--KKSFSGF 157
>sp|P41115|RS11_XENLA 40S ribosomal protein S11 OS=Xenopus laevis GN=rps11 PE=2 SV=1
Length = 158
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 122/158 (77%), Gaps = 5/158 (3%)
Query: 1 MAE-QTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 59
MA+ QTE+A+ KQP +F + K+ +G+ + R+++S+GLGFKTPREAI+GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLEGETGKEKLPRYYRSVGLGFKTPREAIDGTYIDKKC 60
Query: 60 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 118
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 119 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 156
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QVGDTVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|Q54S90|RS11_DICDI 40S ribosomal protein S11 OS=Dictyostelium discoideum GN=rps11 PE=1
SV=1
Length = 155
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 119/157 (75%), Gaps = 3/157 (1%)
Query: 1 MAE-QTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 59
MA+ Q EKAF KQ F + + K GK G R++K+IGLG++TP++AIEGTYIDKKC
Sbjct: 1 MADIQAEKAFQKQQVSFKNRFQLKASK--GKEGIRYYKNIGLGYRTPKDAIEGTYIDKKC 58
Query: 60 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVK 119
PFT VSIRG IL GT S KM RT++VRRNYLH++KKY R+EKRHSNIPAH+SP F VK
Sbjct: 59 PFTSDVSIRGAILRGTVISTKMRRTLVVRRNYLHYIKKYNRFEKRHSNIPAHVSPAFNVK 118
Query: 120 EGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 156
EGD V IGQCRPLSKTVRFNV+K + +S KAF
Sbjct: 119 EGDSVTIGQCRPLSKTVRFNVIKHDISAASKKQFKAF 155
>sp|P62282|RS11_RAT 40S ribosomal protein S11 OS=Rattus norvegicus GN=Rps11 PE=1 SV=3
Length = 158
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 121/158 (76%), Gaps = 5/158 (3%)
Query: 1 MAE-QTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 59
MA+ QTE+A+ KQP +F + K+ G+ + R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 60 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 118
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 119 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 156
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P62281|RS11_MOUSE 40S ribosomal protein S11 OS=Mus musculus GN=Rps11 PE=2 SV=3
Length = 158
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 121/158 (76%), Gaps = 5/158 (3%)
Query: 1 MAE-QTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 59
MA+ QTE+A+ KQP +F + K+ G+ + R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 60 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 118
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 119 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 156
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P61270|RS11_MACFA 40S ribosomal protein S11 OS=Macaca fascicularis GN=RPS11 PE=2 SV=3
Length = 158
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 121/158 (76%), Gaps = 5/158 (3%)
Query: 1 MAE-QTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 59
MA+ QTE+A+ KQP +F + K+ G+ + R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 60 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 118
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 119 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 156
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P62280|RS11_HUMAN 40S ribosomal protein S11 OS=Homo sapiens GN=RPS11 PE=1 SV=3
Length = 158
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 121/158 (76%), Gaps = 5/158 (3%)
Query: 1 MAE-QTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 59
MA+ QTE+A+ KQP +F + K+ G+ + R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 60 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 118
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 119 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 156
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|Q3T0V4|RS11_BOVIN 40S ribosomal protein S11 OS=Bos taurus GN=RPS11 PE=2 SV=3
Length = 158
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 121/158 (76%), Gaps = 5/158 (3%)
Query: 1 MAE-QTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 59
MA+ QTE+A+ KQP +F + K+ G+ + R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 60 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 118
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 119 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 156
+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|Q9XSU4|RS11_CANFA 40S ribosomal protein S11 OS=Canis familiaris GN=RPS11 PE=1 SV=2
Length = 158
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 120/158 (75%), Gaps = 5/158 (3%)
Query: 1 MAE-QTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 59
MA+ QTE+A+ KQP +F + K+ G+ + R++K+IGLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 60 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 118
PFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 119 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 156
GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 121 HIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P79013|RS11_SCHPO 40S ribosomal protein S11 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps11a PE=2 SV=2
Length = 152
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 109/144 (75%), Gaps = 8/144 (5%)
Query: 1 MAEQTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
+ Q+E+AF KQP +F ++KK G R++K +GLGFKTP EAI G Y+DKKCP
Sbjct: 5 LVVQSERAFQKQPHIFQNAKKGA--------GRRWYKDVGLGFKTPAEAIYGEYVDKKCP 56
Query: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
F G VSIRGRIL GT S KM+RTII+RR YLHF+ KY RYEKRH N+ AH+SP FR+ E
Sbjct: 57 FVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRINE 116
Query: 121 GDHVIIGQCRPLSKTVRFNVLKVI 144
GD V +GQCRPLSKTVRFNVL+V+
Sbjct: 117 GDVVTVGQCRPLSKTVRFNVLRVV 140
>sp|P0CX48|RS11B_YEAST 40S ribosomal protein S11-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS11B PE=1 SV=1
Length = 156
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/156 (58%), Positives = 117/156 (75%), Gaps = 7/156 (4%)
Query: 1 MAEQTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
+ Q+E+AF KQP +F + K + K R++K+ GLGFKTP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFNNPKV-----KTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCP 59
Query: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
FTG VSIRG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+
Sbjct: 60 FTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQV 119
Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 156
GD V +GQCRP+SKTVRFNV+KV + ++G A K F
Sbjct: 120 GDIVTVGQCRPISKTVRFNVVKV--SAAAGKANKQF 153
>sp|P0CX47|RS11A_YEAST 40S ribosomal protein S11-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS11A PE=1 SV=1
Length = 156
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/156 (58%), Positives = 117/156 (75%), Gaps = 7/156 (4%)
Query: 1 MAEQTEKAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
+ Q+E+AF KQP +F + K + K R++K+ GLGFKTP+ AIEG+YIDKKCP
Sbjct: 5 LTVQSERAFQKQPHIFNNPKV-----KTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCP 59
Query: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120
FTG VSIRG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+
Sbjct: 60 FTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQV 119
Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 156
GD V +GQCRP+SKTVRFNV+KV + ++G A K F
Sbjct: 120 GDIVTVGQCRPISKTVRFNVVKV--SAAAGKANKQF 153
>sp|P52812|RS11_ANOGA 40S ribosomal protein S11 OS=Anopheles gambiae GN=RpS11 PE=2 SV=2
Length = 153
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 114/159 (71%), Gaps = 10/159 (6%)
Query: 1 MAEQTE-KAFLKQPKVFLSSKKAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 59
MA+Q +AF KQ + L+ K + K G R SIGLGFKTP+EAI GTYIDKKC
Sbjct: 1 MADQQNIRAFQKQLGINLNRKNVSRKK-----GLRMHHSIGLGFKTPKEAITGTYIDKKC 55
Query: 60 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 118
PFTG +SIRGRIL G KM+RTI++RR+YLHF++KY R+EKRH N+ H+SPCFR V
Sbjct: 56 PFTGHISIRGRILTGVVRKMKMHRTIVIRRDYLHFIRKYDRFEKRHRNMSVHLSPCFRDV 115
Query: 119 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 157
+ GD V +G+CRPLSKTVRFNVLKV G+KK F+
Sbjct: 116 EAGDIVTVGECRPLSKTVRFNVLKV---SKMAGSKKKFS 151
>sp|Q292D0|RS11_DROPS 40S ribosomal protein S11 OS=Drosophila pseudoobscura pseudoobscura
GN=RpS11 PE=3 SV=2
Length = 155
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/158 (61%), Positives = 114/158 (72%), Gaps = 8/158 (5%)
Query: 1 MAEQTEKAFLKQPKVFLSSK-KAGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKC 59
MA+Q E+AF KQ V L+ K K G K K R ++ +GLGFKTPREAI+GTYIDKKC
Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGVTK---KKILRRYRDVGLGFKTPREAIDGTYIDKKC 57
Query: 60 PFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-V 118
P+TG V IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR V
Sbjct: 58 PWTGDVRIRGRILIGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDV 117
Query: 119 KEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 156
+ GD V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 118 EHGDIVTIGECRPLSKTVRFNVLKV---NKGQGAKKSF 152
>sp|Q6XHX5|RS11_DROYA 40S ribosomal protein S11 OS=Drosophila yakuba GN=RpS11 PE=2 SV=1
Length = 155
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 114/160 (71%), Gaps = 12/160 (7%)
Query: 1 MAEQTEKAFLKQPKVFLSSKKAGKGKRPG---KGGNRFWKSIGLGFKTPREAIEGTYIDK 57
MA+Q E+AF KQ V L+ K +PG K R + +GLGFKTPREAI+GTYIDK
Sbjct: 1 MADQNERAFQKQFGVNLNRKV-----KPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDK 55
Query: 58 KCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR 117
KCP+TG V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR
Sbjct: 56 KCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFR 115
Query: 118 -VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 156
V+ GD V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 116 DVEHGDIVTIGECRPLSKTVRFNVLKV---SKGQGAKKSF 152
>sp|Q0E9B6|RS11_DROME 40S ribosomal protein S11 OS=Drosophila melanogaster GN=RpS11 PE=1
SV=1
Length = 155
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 114/160 (71%), Gaps = 12/160 (7%)
Query: 1 MAEQTEKAFLKQPKVFLSSKKAGKGKRPG---KGGNRFWKSIGLGFKTPREAIEGTYIDK 57
MA+Q E+AF KQ V L+ K +PG K R + +GLGFKTPREAI+GTYIDK
Sbjct: 1 MADQNERAFQKQFGVNLNRKV-----KPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDK 55
Query: 58 KCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR 117
KCP+TG V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H SP FR
Sbjct: 56 KCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFR 115
Query: 118 -VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 156
V+ GD V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 116 DVEHGDIVTIGECRPLSKTVRFNVLKV---SKGQGAKKSF 152
>sp|Q8TW21|RS17_METKA 30S ribosomal protein S17P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rps17p PE=3 SV=1
Length = 118
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 31 GGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRN 90
G R K IGLG K PR + D CPF G + +RG IL G S +M++T+IV R
Sbjct: 3 GEYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVERE 58
Query: 91 YLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 144
Y + +KY+R+E+R S IPAH PC +EGD V I +CRPLSKT F V++V+
Sbjct: 59 YYRYDRKYERWERRRSRIPAHNPPCIDAQEGDKVRIAECRPLSKTKSFVVIEVL 112
>sp|Q0W1X9|RS17_UNCMA 30S ribosomal protein S17P OS=Uncultured methanogenic archaeon RC-I
GN=rps17p PE=3 SV=1
Length = 111
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 35 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 94
K IGL K P+ D +CPF G++++RG+I GT SAKM+++++V R YL
Sbjct: 1 MAKDIGLNVKAPKTECN----DPQCPFHGSLAVRGQIFEGTVVSAKMSKSVVVSREYLKR 56
Query: 95 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 143
KY RYEKR S + AH PC KEGD V+I +CRPLSKT F V++V
Sbjct: 57 DLKYDRYEKRRSKLHAHNPPCINAKEGDKVVIAECRPLSKTKTFVVVEV 105
>sp|A2SPL1|RS17_METLZ 30S ribosomal protein S17P OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=rps17p PE=3 SV=1
Length = 108
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Query: 35 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 94
K+IGL P + + D CPF G++ +RG+++ G S +M T++V RN+LH
Sbjct: 1 MAKNIGLNVAVPEKDCD----DVNCPFHGSLPVRGQVITGKVVSERMQGTVVVERNFLHK 56
Query: 95 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 144
V+KY RYEKR S I AH++PC K GD V I +CRPL+KT + V++VI
Sbjct: 57 VQKYDRYEKRSSKIHAHMAPCLNAKIGDEVKIAECRPLNKTTSYVVVEVI 106
>sp|Q2FT32|RS17_METHJ 30S ribosomal protein S17P OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rps17p PE=3 SV=1
Length = 108
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 35 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 94
+ IGL P E D CPF GT+ +RG+++ G S KM +++V+R+YLHF
Sbjct: 1 MARDIGLNVPVP----EKDCSDVNCPFHGTLPVRGQVITGKVVSDKMTGSVVVQRDYLHF 56
Query: 95 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 143
V+KYQRYEKR S I AH PC + GD V I +CRPLSKT + V++V
Sbjct: 57 VRKYQRYEKRSSKIHAHNPPCLHARVGDMVSIAECRPLSKTKTYVVVEV 105
>sp|Q8TRT8|RS17_METAC 30S ribosomal protein S17P OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rps17p PE=3
SV=1
Length = 109
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 35 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 94
+ IGL P E + Y CPF GT+ +RG+IL GT S+KM+ T+++ R Y+
Sbjct: 1 MARDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKM 56
Query: 95 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 142
V KYQRYEKR S I AH C K GD V I +CRP+SKT + V+K
Sbjct: 57 VSKYQRYEKRRSKIHAHNPACISAKVGDIVTIAECRPISKTKSYVVVK 104
>sp|Q8PV41|RS17_METMA 30S ribosomal protein S17P OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rps17p PE=3 SV=2
Length = 109
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 35 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 94
+ IGL P E + Y CPF GT+ +RG+IL GT S+KM+ T+++ R Y+
Sbjct: 1 MARDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKM 56
Query: 95 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 142
V KYQRYEKR S I AH C K GD V I +CRP+SKT F V+K
Sbjct: 57 VSKYQRYEKRRSKIHAHNPACISAKVGDIVTIVECRPISKTKSFVVVK 104
>sp|Q46GA4|RS17_METBF 30S ribosomal protein S17P OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rps17p PE=3 SV=1
Length = 109
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
Query: 35 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 94
+ IGL P E +Y CPF GT+S+RG+IL GT S+KM+ T+++ R Y+
Sbjct: 1 MARDIGLNIPAPSEECNDSY----CPFHGTLSVRGQILVGTVVSSKMDNTVVIERQYMKL 56
Query: 95 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 142
V KYQRYEKR S + AH PC K GD V I +CR +SKT + V+K
Sbjct: 57 VPKYQRYEKRRSKVHAHNPPCISAKVGDIVTIAECRRISKTKSYVVVK 104
>sp|B8GKE2|RS17_METPE 30S ribosomal protein S17P OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rps17p PE=3 SV=1
Length = 108
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 72/107 (67%), Gaps = 4/107 (3%)
Query: 37 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 96
++IGL + P E + D CPF G +S+RG+++ G S +M TI+V R+YLH+V+
Sbjct: 3 RNIGLNVQPPVEECQ----DVNCPFHGNLSVRGQVITGKVVSDRMLGTIVVGRDYLHYVR 58
Query: 97 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 143
KY+RYEKR S + AH PC +VK GD V I +CRP+SK+ F V++V
Sbjct: 59 KYKRYEKRSSKLHAHNPPCLQVKVGDIVKIAECRPISKSTTFVVVEV 105
>sp|A3CT06|RS17_METMJ 30S ribosomal protein S17P OS=Methanoculleus marisnigri (strain
ATCC 35101 / DSM 1498 / JR1) GN=rps17p PE=3 SV=1
Length = 108
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 37 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 96
++IGL P E D CPF GT+ +RG+++ G S +MN T++V R +LH+VK
Sbjct: 3 RNIGLDVPIPETECE----DVNCPFHGTLPVRGQVITGKVVSDRMNGTVVVEREFLHYVK 58
Query: 97 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 144
KY+RYEKR S AH +PC GD V I +CRPLSKT F V++V+
Sbjct: 59 KYKRYEKRRSRYHAHSTPCINAGVGDVVRIAECRPLSKTTNFVVVEVM 106
>sp|A7I5P8|RS17_METB6 30S ribosomal protein S17P OS=Methanoregula boonei (strain 6A8)
GN=rps17p PE=3 SV=1
Length = 108
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 71/109 (65%), Gaps = 4/109 (3%)
Query: 35 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 94
++IGL + P++ + D CPF GT+ +RG+++ G S KM T++V R+YLH+
Sbjct: 1 MAQNIGLNVQPPKQECK----DVNCPFHGTLPVRGQVITGKVVSDKMMGTVVVARDYLHY 56
Query: 95 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 143
V+KY RYEKR S + AH PC + K GD V I +CRPLSK+ + V++V
Sbjct: 57 VRKYNRYEKRISKLHAHNPPCIQAKVGDLVKIAECRPLSKSTTYVVVEV 105
>sp|O24786|RS17_HALSA 30S ribosomal protein S17P OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rps17p PE=3 SV=1
Length = 109
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 38 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 97
+IGL P EGT D+ CPF G +S+RG++L G S M +T++V R Y FV K
Sbjct: 2 AIGLNVTEP----EGTCSDEDCPFHGNLSVRGQVLEGEVASTDMEKTVVVEREYDVFVPK 57
Query: 98 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 149
Y RY KR S +PAH CF + GD V I + RPLSKT V+++ G +
Sbjct: 58 YDRYMKRRSRVPAHAPECFDISVGDTVSIAETRPLSKTKSHVVVEITDGGDA 109
>sp|B0R665|RS17_HALS3 30S ribosomal protein S17P OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rps17p PE=3 SV=1
Length = 109
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 38 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 97
+IGL P EGT D+ CPF G +S+RG++L G S M +T++V R Y FV K
Sbjct: 2 AIGLNVTEP----EGTCSDEDCPFHGNLSVRGQVLEGEVASTDMEKTVVVEREYDVFVPK 57
Query: 98 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 149
Y RY KR S +PAH CF + GD V I + RPLSKT V+++ G +
Sbjct: 58 YDRYMKRRSRVPAHAPECFDISVGDTVSIAETRPLSKTKSHVVVEITDGGDA 109
>sp|Q12ZU2|RS17_METBU 30S ribosomal protein S17P OS=Methanococcoides burtonii (strain DSM
6242) GN=rps17p PE=3 SV=1
Length = 109
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 35 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF 94
K IGL P + + D CPF G + +RG+I GT SAKM+RT+++++
Sbjct: 1 MAKDIGLDIPEPTKECD----DINCPFHGELPVRGQIHVGTVVSAKMDRTVVIQQRREKL 56
Query: 95 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 142
+ KYQRYEKR S I AH PC K GD V I +CRPLSKT + V+K
Sbjct: 57 INKYQRYEKRQSKIHAHNPPCIDAKVGDIVTIAECRPLSKTKSYVVVK 104
>sp|P12741|RS17_HALMA 30S ribosomal protein S17P OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rps17p PE=1
SV=3
Length = 112
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 38 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 97
++GL + P E T D+ CPF G +S+RG+ L G S M +T++V R Y V K
Sbjct: 2 ALGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPK 57
Query: 98 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 152
Y R+ KR S +PAH C + GD V I +CRPLSKT V+ V+ G A
Sbjct: 58 YDRFMKRRSRVPAHAPDCLDLAVGDTVTIAECRPLSKTKSHVVVGVVADEQDGDA 112
>sp|Q18GF8|RS17_HALWD 30S ribosomal protein S17P OS=Haloquadratum walsbyi (strain DSM
16790) GN=rps17p PE=3 SV=1
Length = 110
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 38 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKK 97
+IGL P E + D CPF G++S+RG+ L GT S M++T+IV R Y V K
Sbjct: 2 AIGLNVTEP----EVSCADTNCPFHGSLSVRGQTLEGTVASTDMDKTVIVEREYDVRVPK 57
Query: 98 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAK 153
Y R KR S IPAH PC + EGD V I + RPLSKT V++ I +GGA+
Sbjct: 58 YDRLMKRRSRIPAHAPPCVDLAEGDTVRIAETRPLSKTKSHVVVEQI---DTGGAE 110
>sp|O26120|RS17_METTH 30S ribosomal protein S17P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rps17p PE=3 SV=1
Length = 106
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%)
Query: 56 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 115
D CPF G + +RG+IL GT S K RT+ V R++ F++KY+RYEKR S I AH C
Sbjct: 15 DPNCPFHGDLPLRGQILEGTVVSDKAERTVTVERSFYKFIRKYERYEKRKSKIKAHKPDC 74
Query: 116 FRVKEGDHVIIGQCRPLSKTVRFNVLKV 143
V+ GD V I +CRPLSKT F V++V
Sbjct: 75 IDVRVGDTVKIAECRPLSKTKNFVVVEV 102
>sp|Q9UX98|RS17_SULSO 30S ribosomal protein S17P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps17p PE=3 SV=1
Length = 114
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 56 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 115
D+ CP+ G++ +RG L G + + ++ R YL++ KY+RYE+R S I AH+ PC
Sbjct: 25 DEDCPYHGSLRVRGITLEGVIVKYRGTKAAVIERQYLYYDSKYKRYERRRSRIHAHVPPC 84
Query: 116 FRVKEGDHVIIGQCRPLSKTVRFNVL 141
V+EGD VIIG+CRPLSK++ F VL
Sbjct: 85 INVREGDKVIIGECRPLSKSISFVVL 110
>sp|O59426|RS17_PYRHO 30S ribosomal protein S17P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps17p PE=3 SV=1
Length = 116
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 37 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 96
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y H++K
Sbjct: 6 RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVISDKPRKTVTVERQYYHYLK 61
Query: 97 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 144
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 62 KYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAVL 109
>sp|Q9V1U5|RS17_PYRAB 30S ribosomal protein S17P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps17p PE=3 SV=2
Length = 113
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 37 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 96
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y H++K
Sbjct: 3 RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVVSDKPRKTVTVERQYYHYLK 58
Query: 97 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 144
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 59 KYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVVVAVL 106
>sp|Q2NFW6|RS17_METST 30S ribosomal protein S17P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rps17p PE=3 SV=1
Length = 106
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 39 IGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKY 98
+G+ K P + D CPF G +S+RG+++ GT S K +RTI V R++ ++ K+
Sbjct: 2 VGINVKQPEKECH----DPNCPFHGELSVRGQVIEGTVTSDKADRTITVERSFYKYINKF 57
Query: 99 QRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 143
+RYEKR+S I AH C VK GD V I +CR LSKT F +++V
Sbjct: 58 ERYEKRNSKIKAHKPDCLDVKVGDSVKIAECRQLSKTKHFVLVEV 102
>sp|Q975I9|RS17_SULTO 30S ribosomal protein S17P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rps17p PE=3 SV=2
Length = 113
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 35 FWKSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLH 93
K+IG+ G P + + D CPF G + +RG IL G + +T +V R+YL
Sbjct: 7 LVKNIGIEGVNPPSKTCD----DINCPFHGNLRVRGIILEGRLIRYRAEKTGVVERDYLF 62
Query: 94 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 141
+ KY+RYE+R S I HI PC VKEGD+VII +CRP++K+V F V+
Sbjct: 63 YDTKYKRYERRRSRIHVHIPPCLDVKEGDNVIIAECRPIAKSVSFVVI 110
>sp|Q4JB49|RS17_SULAC 30S ribosomal protein S17P OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rps17p PE=3 SV=1
Length = 114
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 29 GKGGNRFWKSIGL-GFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIV 87
GK G + K++G+ G P + + Y CP+ G++ +RG +L G A+ NRT V
Sbjct: 2 GKKG-QLVKNVGIEGVSAPSKTCDDEY----CPYHGSLKVRGIVLEGKLIRARANRTGTV 56
Query: 88 RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 143
R Y+ + KY+RYE+R S I HI C VKEGD+VIIG+ RP++K++ F +L V
Sbjct: 57 EREYIFYDSKYKRYERRRSRIHVHIPSCLEVKEGDNVIIGESRPIAKSISFVILGV 112
>sp|Q9YF81|RS17_AERPE 30S ribosomal protein S17P OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps17p
PE=3 SV=2
Length = 114
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 60/96 (62%)
Query: 48 EAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSN 107
E E D CP+ GT+ +RG +L G A+ R ++V+ YL++ KKY RYE+R
Sbjct: 16 EPPEKVCSDPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKK 75
Query: 108 IPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 143
I AH+ C VKEGD V+IG+ P+SKTV+F VL V
Sbjct: 76 IHAHLPDCISVKEGDVVVIGETMPISKTVKFTVLGV 111
>sp|P14042|RS17_METVA 30S ribosomal protein S17P OS=Methanococcus vannielii GN=rps17p
PE=3 SV=1
Length = 109
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 36 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 95
+IG+ K P E D CPF GT+S+RG+I G K + TI+++R ++
Sbjct: 1 MSNIGIDVKAPENVCE----DVNCPFHGTLSVRGQIFEGVVSGDKGHNTIVIKREVTGYI 56
Query: 96 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 142
KY+RYEKR +++ AH PC K GD V + +CRP+SKT F V++
Sbjct: 57 SKYERYEKRTTSLVAHNPPCINAKTGDVVKVMECRPVSKTKSFVVIE 103
>sp|Q6LXE4|RS17_METMP 30S ribosomal protein S17P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rps17p PE=3 SV=1
Length = 109
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 36 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 95
+IG+ K P E D CPF GT+S+RG+I G S K + TI+++R ++
Sbjct: 1 MSNIGIDVKAPENVCE----DPNCPFHGTLSVRGQIFEGIVTSDKGHDTIVIKREVTGYI 56
Query: 96 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 142
KY+RYEKR +++ AH C + K GD V + +CRP+SKT F V++
Sbjct: 57 SKYERYEKRTTSLVAHNPACIKAKVGDTVKVMECRPISKTKSFVVIE 103
>sp|Q8U008|RS17_PYRFU 30S ribosomal protein S17P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rps17p PE=1 SV=1
Length = 113
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 37 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 96
+ IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y ++
Sbjct: 3 RDIGLRVQPPAEKCD----DPKCPWHGNLKIHGRVFEGIVVSDKPRKTVTVERQYYFYLN 58
Query: 97 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 144
KY+RYE R S I AH PC K GD V+I + RPLSKT F V+ V+
Sbjct: 59 KYERYELRRSKIHAHNPPCINAKVGDKVLIAETRPLSKTKHFVVVAVL 106
>sp|Q6L1B8|RS17_PICTO 30S ribosomal protein S17P OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rps17p
PE=3 SV=1
Length = 106
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 36 WKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFV 95
++IG+ K P E T D KCPF G + I G+I+ GT S KMN +I+++R +
Sbjct: 1 MENIGIDVKKP----ERTCNDPKCPFHGNLRIHGQIIVGTVVSTKMNGSIVLKRESRRLI 56
Query: 96 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLK 142
KKY+RYE + S AH+ C V+ GD V I +CR L+KT+ F V++
Sbjct: 57 KKYERYETKISKFHAHLPGCIDVRPGDRVKIAECRKLAKTISFVVVE 103
>sp|Q5JDH9|RS17_PYRKO 30S ribosomal protein S17P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rps17p PE=3 SV=1
Length = 114
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Query: 37 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVK 96
+ IGL + P E D KCP+ G + I GR + G S K +T++V R Y H++K
Sbjct: 2 REIGLRVQPPAEVCN----DPKCPWHGNLKIHGRYVEGIVVSDKGKKTVVVERQYYHYLK 57
Query: 97 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 144
KY+RYE R S + AH C K GD V+I + RP+SKT + V+ V+
Sbjct: 58 KYERYELRKSKVHAHNPECINAKVGDKVLIAETRPISKTKSWVVVAVL 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,219,097
Number of Sequences: 539616
Number of extensions: 2514379
Number of successful extensions: 5526
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 514
Number of HSP's that attempted gapping in prelim test: 5249
Number of HSP's gapped (non-prelim): 677
length of query: 159
length of database: 191,569,459
effective HSP length: 108
effective length of query: 51
effective length of database: 133,290,931
effective search space: 6797837481
effective search space used: 6797837481
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)