Query 031484
Match_columns 159
No_of_seqs 115 out of 1534
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 23:52:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031484.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031484hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s2u_A UDP-N-acetylglucosamine 100.0 9.5E-27 3.3E-31 180.3 19.0 147 12-158 209-356 (365)
2 1f0k_A MURG, UDP-N-acetylgluco 99.9 4E-21 1.4E-25 147.2 18.7 142 14-158 212-355 (364)
3 3tsa_A SPNG, NDP-rhamnosyltran 99.9 2.9E-21 1E-25 149.6 12.9 146 4-158 241-388 (391)
4 3rsc_A CALG2; TDP, enediyne, s 99.9 8E-21 2.7E-25 148.2 14.3 137 14-158 276-413 (415)
5 4fzr_A SSFS6; structural genom 99.9 1.2E-20 4E-25 146.7 15.0 134 14-155 264-397 (398)
6 3ia7_A CALG4; glycosysltransfe 99.9 1E-20 3.5E-25 146.5 14.5 137 14-158 260-398 (402)
7 2p6p_A Glycosyl transferase; X 99.9 3.3E-20 1.1E-24 143.5 17.2 136 13-157 243-378 (384)
8 2yjn_A ERYCIII, glycosyltransf 99.8 1.3E-20 4.5E-25 148.6 13.8 138 13-158 298-435 (441)
9 3otg_A CALG1; calicheamicin, T 99.8 1.4E-20 4.7E-25 146.5 12.5 137 14-158 271-408 (412)
10 2iyf_A OLED, oleandomycin glyc 99.8 2.1E-20 7.1E-25 146.6 13.5 138 13-158 261-399 (430)
11 2iya_A OLEI, oleandomycin glyc 99.8 7.2E-20 2.5E-24 143.5 15.8 138 13-158 283-421 (424)
12 3h4t_A Glycosyltransferase GTF 99.8 3.1E-19 1.1E-23 139.5 16.4 135 13-158 248-382 (404)
13 2o6l_A UDP-glucuronosyltransfe 99.8 2E-19 7E-24 124.8 12.9 113 14-137 51-165 (170)
14 1iir_A Glycosyltransferase GTF 99.8 5.2E-19 1.8E-23 138.5 15.1 135 14-158 266-400 (415)
15 3oti_A CALG3; calicheamicin, T 99.8 1.2E-19 4E-24 141.2 11.3 134 13-158 262-397 (398)
16 1rrv_A Glycosyltransferase GTF 99.8 1.3E-18 4.4E-23 136.2 16.2 134 14-158 267-401 (416)
17 1vgv_A UDP-N-acetylglucosamine 99.8 1.7E-18 6E-23 133.3 11.5 146 1-158 225-374 (384)
18 4amg_A Snogd; transferase, pol 99.8 5E-18 1.7E-22 131.5 11.9 133 13-157 267-399 (400)
19 1v4v_A UDP-N-acetylglucosamine 99.8 2.2E-17 7.6E-22 127.1 14.2 146 1-158 217-366 (376)
20 3ot5_A UDP-N-acetylglucosamine 99.7 2.5E-17 8.6E-22 129.0 14.2 145 2-158 245-393 (403)
21 3beo_A UDP-N-acetylglucosamine 99.7 3.2E-17 1.1E-21 125.8 13.8 146 1-158 225-374 (375)
22 2gek_A Phosphatidylinositol ma 99.7 1.4E-16 4.7E-21 123.2 13.9 147 1-158 227-381 (406)
23 2jzc_A UDP-N-acetylglucosamine 99.7 3.9E-17 1.3E-21 118.3 9.5 109 38-159 115-224 (224)
24 2c1x_A UDP-glucose flavonoid 3 99.7 3.1E-16 1.1E-20 124.6 15.3 108 13-127 299-413 (456)
25 3dzc_A UDP-N-acetylglucosamine 99.7 6.8E-17 2.3E-21 126.2 11.2 142 2-155 251-396 (396)
26 3okp_A GDP-mannose-dependent a 99.7 1.3E-16 4.3E-21 122.9 12.5 148 1-159 216-378 (394)
27 3c48_A Predicted glycosyltrans 99.7 2.8E-16 9.7E-21 122.9 13.2 148 1-158 261-423 (438)
28 2x6q_A Trehalose-synthase TRET 99.7 4.3E-16 1.5E-20 121.3 14.1 146 1-158 249-412 (416)
29 2bfw_A GLGA glycogen synthase; 99.7 7E-16 2.4E-20 108.9 13.2 128 2-140 56-195 (200)
30 2pq6_A UDP-glucuronosyl/UDP-gl 99.7 4.7E-15 1.6E-19 118.4 19.2 136 13-156 323-476 (482)
31 2jjm_A Glycosyl transferase, g 99.7 2.3E-16 7.8E-21 122.1 10.3 146 2-158 230-383 (394)
32 2iw1_A Lipopolysaccharide core 99.7 3.1E-16 1.1E-20 120.0 10.7 144 2-156 215-371 (374)
33 3hbf_A Flavonoid 3-O-glucosylt 99.7 4E-15 1.4E-19 118.1 16.7 136 13-155 301-450 (454)
34 3oy2_A Glycosyltransferase B73 99.6 2.1E-15 7.1E-20 117.2 12.2 147 1-158 202-388 (413)
35 3fro_A GLGA glycogen synthase; 99.6 2.2E-15 7.7E-20 117.2 12.2 147 1-158 270-428 (439)
36 3hbm_A UDP-sugar hydrolase; PS 99.6 2.5E-15 8.6E-20 112.5 11.4 88 16-108 185-274 (282)
37 2acv_A Triterpene UDP-glucosyl 99.6 2.1E-14 7.1E-19 114.3 15.2 119 13-136 305-436 (463)
38 2r60_A Glycosyl transferase, g 99.6 7.7E-15 2.6E-19 116.9 11.1 145 2-157 281-456 (499)
39 2vch_A Hydroquinone glucosyltr 99.6 7.3E-14 2.5E-18 111.6 16.4 93 39-136 341-442 (480)
40 2f9f_A First mannosyl transfer 99.6 2.4E-14 8.3E-19 99.7 11.6 124 5-139 41-176 (177)
41 3qhp_A Type 1 capsular polysac 99.6 2.2E-15 7.6E-20 103.4 6.1 137 2-151 21-165 (166)
42 2vsy_A XCC0866; transferase, g 99.6 4.7E-14 1.6E-18 114.0 14.5 151 1-157 393-556 (568)
43 2xci_A KDO-transferase, 3-deox 99.6 3.9E-15 1.3E-19 115.4 7.2 133 1-142 212-361 (374)
44 4hwg_A UDP-N-acetylglucosamine 99.5 6.5E-15 2.2E-19 114.7 7.1 144 2-158 226-375 (385)
45 1rzu_A Glycogen synthase 1; gl 99.5 1.6E-13 5.3E-18 108.9 15.2 142 2-157 310-472 (485)
46 2qzs_A Glycogen synthase; glyc 99.5 1.8E-13 6E-18 108.6 14.7 142 2-157 311-473 (485)
47 3s28_A Sucrose synthase 1; gly 99.5 7.2E-14 2.5E-18 117.5 11.8 147 1-157 590-766 (816)
48 2iuy_A Avigt4, glycosyltransfe 99.4 4.5E-12 1.6E-16 96.1 12.1 126 14-157 188-332 (342)
49 2x0d_A WSAF; GT4 family, trans 99.4 9.8E-14 3.4E-18 108.9 2.5 132 1-150 260-400 (413)
50 3vue_A GBSS-I, granule-bound s 99.3 4.1E-11 1.4E-15 96.9 11.1 143 1-158 345-509 (536)
51 1uqt_A Alpha, alpha-trehalose- 99.2 1.5E-10 5.2E-15 92.5 13.3 144 1-157 273-451 (482)
52 2hy7_A Glucuronosyltransferase 99.2 4.8E-11 1.6E-15 93.2 8.7 122 5-156 238-373 (406)
53 3t5t_A Putative glycosyltransf 99.1 2.5E-09 8.4E-14 85.5 12.3 141 1-154 299-467 (496)
54 3rhz_A GTF3, nucleotide sugar 98.9 1.2E-08 4.1E-13 78.1 10.6 108 12-141 197-317 (339)
55 3q3e_A HMW1C-like glycosyltran 98.9 9.5E-08 3.2E-12 78.0 14.7 133 2-140 458-602 (631)
56 3nb0_A Glycogen [starch] synth 98.7 1.6E-07 5.4E-12 77.5 12.1 102 47-156 511-629 (725)
57 4gyw_A UDP-N-acetylglucosamine 98.5 8.7E-06 3E-10 68.0 16.1 149 2-156 540-701 (723)
58 2gt1_A Lipopolysaccharide hept 97.4 0.00087 3E-08 50.2 8.3 114 4-126 198-322 (326)
59 1psw_A ADP-heptose LPS heptosy 97.3 0.00057 2E-08 51.5 7.2 65 14-80 213-286 (348)
60 3tov_A Glycosyl transferase fa 97.0 0.0025 8.5E-08 48.6 8.0 65 14-80 217-286 (349)
61 3l7i_A Teichoic acid biosynthe 95.3 0.043 1.5E-06 45.7 6.9 100 46-156 607-717 (729)
62 3ehd_A Uncharacterized conserv 92.5 0.57 2E-05 31.7 7.0 31 50-80 65-103 (162)
63 2f62_A Nucleoside 2-deoxyribos 91.5 0.69 2.3E-05 31.2 6.5 33 49-81 62-105 (161)
64 4fyk_A Deoxyribonucleoside 5'- 90.1 0.49 1.7E-05 31.7 4.6 70 50-127 64-143 (152)
65 2iz6_A Molybdenum cofactor car 90.0 1.4 5E-05 30.1 7.1 67 50-125 103-173 (176)
66 2khz_A C-MYC-responsive protei 89.7 0.53 1.8E-05 31.8 4.7 32 50-81 73-110 (165)
67 1s2d_A Purine trans deoxyribos 89.4 0.63 2.1E-05 31.6 4.9 32 50-81 77-116 (167)
68 1ydh_A AT5G11950; structural g 88.6 2.8 9.4E-05 29.7 7.9 35 48-82 99-143 (216)
69 3sbx_A Putative uncharacterize 87.1 3.6 0.00012 28.5 7.6 35 48-82 102-146 (189)
70 2l2q_A PTS system, cellobiose- 86.0 3.2 0.00011 25.7 6.4 68 13-81 3-83 (109)
71 1f8y_A Nucleoside 2-deoxyribos 84.9 1.3 4.6E-05 29.6 4.4 32 50-81 74-113 (157)
72 2q5c_A NTRC family transcripti 82.5 1.6 5.3E-05 30.3 4.1 30 53-83 50-79 (196)
73 1rcu_A Conserved hypothetical 81.4 3.6 0.00012 28.6 5.6 35 48-82 112-150 (195)
74 2i2c_A Probable inorganic poly 80.0 3.2 0.00011 30.2 5.2 30 53-82 34-69 (272)
75 1t35_A Hypothetical protein YV 79.8 12 0.00042 25.7 8.3 35 48-82 91-135 (191)
76 3qua_A Putative uncharacterize 77.5 4.6 0.00016 28.1 5.1 35 48-82 111-155 (199)
77 3iv7_A Alcohol dehydrogenase I 77.5 21 0.00072 27.1 9.5 79 5-84 28-122 (364)
78 1wzu_A Quinolinate synthetase 75.0 3 0.0001 31.1 3.7 56 27-83 92-147 (300)
79 3afo_A NADH kinase POS5; alpha 73.9 8.7 0.0003 29.6 6.2 34 49-82 109-147 (388)
80 2an1_A Putative kinase; struct 72.5 3.9 0.00013 29.9 3.9 32 51-82 60-95 (292)
81 2a33_A Hypothetical protein; s 71.3 8.2 0.00028 27.2 5.2 34 49-82 104-147 (215)
82 3jzd_A Iron-containing alcohol 71.3 31 0.0011 26.1 9.4 79 4-84 26-123 (358)
83 3hl0_A Maleylacetate reductase 70.1 33 0.0011 25.9 9.2 79 4-84 24-121 (353)
84 1yt5_A Inorganic polyphosphate 68.5 3.5 0.00012 29.7 2.9 30 53-82 40-72 (258)
85 3gh1_A Predicted nucleotide-bi 68.3 8.2 0.00028 30.4 4.9 35 48-82 241-288 (462)
86 3ox4_A Alcohol dehydrogenase 2 66.3 30 0.001 26.4 7.8 77 7-84 24-140 (383)
87 2pju_A Propionate catabolism o 66.0 8.8 0.0003 27.2 4.5 67 16-83 14-91 (225)
88 3pfn_A NAD kinase; structural 66.0 6.1 0.00021 30.2 3.8 30 53-82 107-140 (365)
89 1u0t_A Inorganic polyphosphate 65.4 4.8 0.00016 29.8 3.1 31 52-82 73-107 (307)
90 3jte_A Response regulator rece 63.5 23 0.00079 21.8 11.6 107 15-128 4-125 (143)
91 3bq9_A Predicted rossmann fold 61.8 12 0.0004 29.6 4.8 34 48-81 239-285 (460)
92 2pan_A Glyoxylate carboligase; 61.7 45 0.0015 27.0 8.5 76 3-80 31-123 (616)
93 3nbm_A PTS system, lactose-spe 61.2 14 0.00049 22.9 4.3 70 13-82 5-86 (108)
94 3m2t_A Probable dehydrogenase; 60.8 49 0.0017 24.7 8.8 74 5-82 21-101 (359)
95 3uhj_A Probable glycerol dehyd 60.8 54 0.0018 25.1 8.7 80 4-87 43-143 (387)
96 1e2b_A Enzyme IIB-cellobiose; 60.1 25 0.00084 21.6 5.3 48 16-63 5-59 (106)
97 1fy2_A Aspartyl dipeptidase; s 58.3 44 0.0015 23.4 8.2 77 3-80 22-119 (229)
98 2wqk_A 5'-nucleotidase SURE; S 57.8 9.3 0.00032 27.6 3.4 28 55-82 86-127 (251)
99 1wek_A Hypothetical protein TT 57.7 16 0.00055 25.7 4.6 32 50-81 127-169 (217)
100 1eiw_A Hypothetical protein MT 56.6 5.8 0.0002 24.9 1.9 96 14-125 4-109 (111)
101 1ybh_A Acetolactate synthase, 55.4 72 0.0025 25.6 8.6 76 3-80 16-107 (590)
102 1qv9_A F420-dependent methylen 53.4 16 0.00056 26.3 3.9 41 63-108 79-120 (283)
103 3lua_A Response regulator rece 53.0 37 0.0013 20.8 9.5 109 14-129 4-130 (140)
104 3cwc_A Putative glycerate kina 52.8 22 0.00074 27.4 4.8 34 47-80 280-325 (383)
105 1ta9_A Glycerol dehydrogenase; 51.8 84 0.0029 24.5 8.5 83 4-87 81-182 (450)
106 3czc_A RMPB; alpha/beta sandwi 50.5 41 0.0014 20.6 5.4 55 9-63 13-76 (110)
107 2x7j_A 2-succinyl-5-enolpyruvy 50.2 90 0.0031 25.2 8.4 75 4-80 36-126 (604)
108 3eya_A Pyruvate dehydrogenase 50.2 86 0.0029 24.9 8.2 75 4-80 8-98 (549)
109 1j9j_A Stationary phase surviV 50.1 15 0.00051 26.5 3.4 29 54-82 86-128 (247)
110 2wvg_A PDC, pyruvate decarboxy 50.0 96 0.0033 24.7 8.9 76 3-80 7-97 (568)
111 3to5_A CHEY homolog; alpha(5)b 49.6 47 0.0016 21.0 8.8 107 12-125 10-132 (134)
112 3uuw_A Putative oxidoreductase 49.4 71 0.0024 23.0 7.4 74 5-83 22-100 (308)
113 3maj_A DNA processing chain A; 49.4 53 0.0018 25.3 6.5 53 61-121 248-302 (382)
114 2phj_A 5'-nucleotidase SURE; S 49.3 16 0.00053 26.5 3.4 35 48-82 77-127 (251)
115 2vbi_A Pyruvate decarboxylase; 49.1 93 0.0032 24.8 8.3 76 3-80 7-97 (566)
116 2e6c_A 5'-nucleotidase SURE; S 48.9 14 0.00049 26.5 3.2 29 54-82 87-129 (244)
117 1rrm_A Lactaldehyde reductase; 48.5 85 0.0029 23.7 8.9 83 4-87 21-145 (386)
118 3eul_A Possible nitrate/nitrit 48.2 47 0.0016 20.6 11.7 109 12-127 13-136 (152)
119 2qip_A Protein of unknown func 47.6 26 0.00089 23.1 4.2 45 16-60 111-158 (165)
120 2pln_A HP1043, response regula 46.7 47 0.0016 20.1 12.3 105 13-126 17-133 (137)
121 1jq5_A Glycerol dehydrogenase; 46.7 89 0.0031 23.4 8.9 81 4-87 22-123 (370)
122 3hzh_A Chemotaxis response reg 46.6 52 0.0018 20.7 11.9 103 15-125 37-156 (157)
123 3uqz_A DNA processing protein 46.0 39 0.0013 24.9 5.2 42 61-105 227-270 (288)
124 1weh_A Conserved hypothetical 45.7 24 0.00081 23.7 3.7 32 49-81 92-134 (171)
125 3kcn_A Adenylate cyclase homol 45.4 53 0.0018 20.4 14.2 109 14-131 4-128 (151)
126 1t9b_A Acetolactate synthase, 45.4 1.3E+02 0.0044 24.8 9.2 75 4-80 87-177 (677)
127 3lqk_A Dipicolinate synthase s 45.2 63 0.0022 22.3 5.9 57 70-126 119-186 (201)
128 3re1_A Uroporphyrinogen-III sy 43.5 86 0.0029 22.3 7.9 105 12-125 139-263 (269)
129 2zay_A Response regulator rece 42.9 56 0.0019 20.0 12.3 106 13-125 7-127 (147)
130 2vk8_A Pyruvate decarboxylase 40.1 1.4E+02 0.0048 23.7 9.0 76 3-80 8-98 (563)
131 2czc_A Glyceraldehyde-3-phosph 39.9 1.1E+02 0.0038 22.6 7.1 74 5-80 17-109 (334)
132 2g8l_A 287AA long hypothetical 39.5 27 0.00091 25.9 3.4 35 46-82 237-273 (299)
133 4es6_A Uroporphyrinogen-III sy 39.3 96 0.0033 21.6 9.2 102 12-122 131-252 (254)
134 2bon_A Lipid kinase; DAG kinas 39.1 23 0.00078 26.3 3.1 31 53-83 81-119 (332)
135 3ilh_A Two component response 38.9 65 0.0022 19.5 12.6 110 13-129 8-142 (146)
136 1to6_A Glycerate kinase; glyce 38.4 18 0.00062 27.7 2.4 34 47-80 271-315 (371)
137 3ce9_A Glycerol dehydrogenase; 38.2 1.2E+02 0.0041 22.5 8.8 82 3-85 23-123 (354)
138 2pgn_A Cyclohexane-1,2-dione h 38.1 1.2E+02 0.004 24.4 7.3 77 3-80 8-100 (589)
139 3eod_A Protein HNR; response r 38.1 64 0.0022 19.2 12.2 111 12-127 5-127 (130)
140 1k68_A Phytochrome response re 37.6 65 0.0022 19.2 12.6 104 15-125 3-130 (140)
141 1jr2_A Uroporphyrinogen-III sy 37.6 1.1E+02 0.0038 21.8 10.2 104 13-125 156-281 (286)
142 3ijp_A DHPR, dihydrodipicolina 37.3 1.2E+02 0.0041 22.2 8.7 36 47-82 81-120 (288)
143 3mcu_A Dipicolinate synthase, 36.9 1E+02 0.0035 21.3 6.6 56 69-125 116-183 (207)
144 3klo_A Transcriptional regulat 36.9 95 0.0032 20.9 7.0 105 14-125 7-128 (225)
145 3b2n_A Uncharacterized protein 36.7 69 0.0024 19.3 12.2 108 15-128 4-125 (133)
146 2rjn_A Response regulator rece 36.3 76 0.0026 19.6 12.7 109 12-128 5-128 (154)
147 3h05_A Uncharacterized protein 36.2 91 0.0031 20.9 5.5 15 47-61 118-132 (177)
148 1qkk_A DCTD, C4-dicarboxylate 36.1 77 0.0026 19.6 12.0 105 15-128 4-123 (155)
149 2qzj_A Two-component response 36.0 73 0.0025 19.3 11.5 105 14-125 4-120 (136)
150 1z0s_A Probable inorganic poly 36.0 33 0.0011 25.1 3.4 32 51-82 65-99 (278)
151 4e7p_A Response regulator; DNA 35.9 77 0.0026 19.5 13.6 106 14-126 20-140 (150)
152 2v4n_A Multifunctional protein 35.4 14 0.00049 26.7 1.4 29 54-82 84-126 (254)
153 1vlj_A NADH-dependent butanol 35.4 1.5E+02 0.005 22.6 10.2 83 4-87 33-156 (407)
154 3gt7_A Sensor protein; structu 35.1 81 0.0028 19.6 12.7 106 13-125 6-126 (154)
155 3moi_A Probable dehydrogenase; 35.1 1.4E+02 0.0048 22.3 7.7 73 5-82 18-97 (387)
156 2qsj_A DNA-binding response re 34.7 81 0.0028 19.4 9.5 106 14-126 3-124 (154)
157 3lq1_A 2-succinyl-5-enolpyruvy 34.0 1.8E+02 0.0062 23.2 8.8 75 4-80 16-106 (578)
158 3cg4_A Response regulator rece 33.8 79 0.0027 19.1 5.8 105 13-125 6-126 (142)
159 1tvm_A PTS system, galactitol- 33.6 44 0.0015 20.6 3.3 60 14-79 21-90 (113)
160 1i1q_B Anthranilate synthase c 33.4 1.1E+02 0.0036 20.4 5.8 16 67-82 69-84 (192)
161 1qo0_D AMIR; binding protein, 33.4 1E+02 0.0034 20.1 7.4 107 12-126 10-125 (196)
162 1ozh_A ALS, acetolactate synth 33.2 1.8E+02 0.0063 23.1 9.3 75 3-80 15-105 (566)
163 3ff1_A Glucose-6-phosphate iso 33.0 1.2E+02 0.0041 23.8 6.4 28 37-64 109-145 (446)
164 3heb_A Response regulator rece 32.7 88 0.003 19.3 12.3 103 14-123 4-132 (152)
165 2vbf_A Branched-chain alpha-ke 32.4 1.9E+02 0.0065 23.0 8.7 75 4-80 30-119 (570)
166 2qv7_A Diacylglycerol kinase D 32.0 40 0.0014 25.0 3.4 30 54-83 80-115 (337)
167 3hdg_A Uncharacterized protein 31.8 85 0.0029 18.8 12.8 108 13-127 6-126 (137)
168 3s40_A Diacylglycerol kinase; 31.7 50 0.0017 24.1 3.9 31 53-83 62-98 (304)
169 2c31_A Oxalyl-COA decarboxylas 31.4 2E+02 0.0067 22.9 8.4 75 3-80 14-104 (568)
170 1l5x_A SurviVal protein E; str 31.2 18 0.00063 26.5 1.4 29 54-82 84-127 (280)
171 3bfj_A 1,3-propanediol oxidore 31.2 1.7E+02 0.0057 22.0 10.6 83 4-87 23-147 (387)
172 4had_A Probable oxidoreductase 31.1 1.5E+02 0.0053 21.6 7.9 75 5-83 39-120 (350)
173 3euw_A MYO-inositol dehydrogen 30.5 1.6E+02 0.0054 21.5 11.8 70 6-80 20-95 (344)
174 4dad_A Putative pilus assembly 30.1 96 0.0033 18.9 10.1 106 13-125 19-140 (146)
175 3c1a_A Putative oxidoreductase 29.9 1.3E+02 0.0046 21.6 6.0 36 47-82 60-102 (315)
176 2x0s_A Pyruvate phosphate diki 29.7 84 0.0029 27.1 5.3 54 27-80 440-498 (913)
177 3kht_A Response regulator; PSI 29.4 98 0.0033 18.8 12.9 107 13-125 4-127 (144)
178 4feg_A Pyruvate oxidase; carba 28.6 2.3E+02 0.0078 22.8 9.8 76 4-80 16-107 (603)
179 3f4l_A Putative oxidoreductase 28.3 1.3E+02 0.0046 22.0 5.8 71 8-83 22-99 (345)
180 3n53_A Response regulator rece 28.1 1E+02 0.0035 18.6 8.2 106 15-129 4-125 (140)
181 2ffj_A Conserved hypothetical 28.1 65 0.0022 23.7 3.9 35 46-82 241-277 (300)
182 1b0a_A Protein (fold bifunctio 28.1 1.8E+02 0.0061 21.4 6.7 58 6-63 147-211 (288)
183 3nhm_A Response regulator; pro 27.8 99 0.0034 18.3 10.1 105 15-127 5-123 (133)
184 3a06_A 1-deoxy-D-xylulose 5-ph 27.7 2.1E+02 0.0071 22.0 7.9 73 8-80 22-115 (376)
185 1p2f_A Response regulator; DRR 27.7 1.4E+02 0.0046 19.8 10.3 101 16-125 4-116 (220)
186 2hqr_A Putative transcriptiona 27.6 1.4E+02 0.0047 19.9 12.3 67 54-126 44-115 (223)
187 1a4i_A Methylenetetrahydrofola 27.4 1.7E+02 0.0057 21.7 6.0 58 6-63 153-217 (301)
188 3grc_A Sensor protein, kinase; 27.4 1.1E+02 0.0036 18.5 9.8 106 14-126 6-127 (140)
189 4gud_A Imidazole glycerol phos 27.4 1.4E+02 0.0049 20.0 7.6 58 21-82 10-80 (211)
190 3hdv_A Response regulator; PSI 27.1 1E+02 0.0036 18.3 12.5 109 14-129 7-130 (136)
191 3rf7_A Iron-containing alcohol 26.6 2.1E+02 0.0071 21.7 8.8 29 55-84 110-161 (375)
192 1kq3_A Glycerol dehydrogenase; 26.4 66 0.0023 24.2 3.8 81 4-87 32-131 (376)
193 2q28_A Oxalyl-COA decarboxylas 25.5 2.5E+02 0.0086 22.2 8.4 75 3-80 12-102 (564)
194 3i23_A Oxidoreductase, GFO/IDH 25.1 2E+02 0.007 21.0 7.7 71 5-79 18-94 (349)
195 1ovm_A Indole-3-pyruvate decar 25.1 2.5E+02 0.0086 22.1 8.7 75 4-80 10-99 (552)
196 3c3w_A Two component transcrip 25.0 1.6E+02 0.0054 19.7 8.9 103 16-125 3-120 (225)
197 1u11_A PURE (N5-carboxyaminoim 25.0 1.7E+02 0.0057 20.0 6.3 68 16-83 23-108 (182)
198 2ioj_A Hypothetical protein AF 24.6 1.4E+02 0.0046 18.8 7.0 74 47-125 43-120 (139)
199 1p9l_A Dihydrodipicolinate red 24.4 1.9E+02 0.0065 20.4 10.2 47 36-82 23-77 (245)
200 1vkn_A N-acetyl-gamma-glutamyl 24.2 2.3E+02 0.0079 21.3 7.2 73 5-79 29-105 (351)
201 3snk_A Response regulator CHEY 23.9 1.2E+02 0.0042 18.1 5.8 106 13-125 13-132 (135)
202 3dr3_A N-acetyl-gamma-glutamyl 23.9 2E+02 0.0069 21.4 6.0 75 5-80 20-105 (337)
203 2qr3_A Two-component system re 23.7 1.2E+02 0.0042 18.0 11.9 106 14-127 3-127 (140)
204 2wx4_A DCP1, decapping protein 23.4 74 0.0025 16.5 2.4 28 109-136 7-35 (46)
205 4f3y_A DHPR, dihydrodipicolina 23.4 2.1E+02 0.0072 20.6 9.3 37 46-82 65-105 (272)
206 3fhl_A Putative oxidoreductase 23.3 2.3E+02 0.0077 20.9 7.0 70 6-82 22-98 (362)
207 3gdo_A Uncharacterized oxidore 23.2 2.3E+02 0.0078 20.9 7.6 70 6-82 22-98 (358)
208 3qbe_A 3-dehydroquinate syntha 22.7 2.5E+02 0.0086 21.2 8.3 28 55-83 104-138 (368)
209 3ty2_A 5'-nucleotidase SURE; s 22.6 17 0.00059 26.4 -0.1 29 54-82 93-135 (261)
210 3a11_A Translation initiation 22.4 2.4E+02 0.0083 21.0 6.2 69 11-80 164-249 (338)
211 3hv2_A Response regulator/HD d 22.3 1.4E+02 0.0049 18.3 12.5 105 14-126 14-133 (153)
212 3kbq_A Protein TA0487; structu 21.7 44 0.0015 22.5 1.8 33 48-80 56-95 (172)
213 4b4u_A Bifunctional protein fo 21.4 1.8E+02 0.0063 21.5 5.2 57 6-63 167-231 (303)
214 3hww_A 2-succinyl-5-enolpyruvy 21.4 3.1E+02 0.011 21.7 9.2 75 4-80 13-103 (556)
215 3rqi_A Response regulator prot 21.2 1.7E+02 0.0059 18.8 10.4 105 14-125 7-124 (184)
216 2uz1_A Benzaldehyde lyase; thi 21.0 3.1E+02 0.011 21.7 8.1 74 4-80 9-98 (563)
217 1k66_A Phytochrome response re 20.7 1.5E+02 0.0051 17.8 12.4 106 13-125 5-137 (149)
218 3onk_A Epsin-3, ENT3; helix, p 20.6 1.2E+02 0.0041 19.9 3.7 30 114-143 117-146 (150)
219 1v5e_A Pyruvate oxidase; oxido 20.6 3.3E+02 0.011 21.8 9.0 76 3-80 8-100 (590)
220 3u3x_A Oxidoreductase; structu 20.3 2.7E+02 0.0091 20.6 8.5 68 12-83 48-122 (361)
221 3cz5_A Two-component response 20.3 1.6E+02 0.0055 18.0 15.7 106 13-125 4-124 (153)
222 4a5o_A Bifunctional protein fo 20.2 2.4E+02 0.0083 20.6 5.6 26 38-63 187-213 (286)
223 1dcf_A ETR1 protein; beta-alph 20.2 1.5E+02 0.0051 17.6 8.3 28 97-126 101-129 (136)
No 1
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.95 E-value=9.5e-27 Score=180.26 Aligned_cols=147 Identities=27% Similarity=0.437 Sum_probs=129.7
Q ss_pred cCCeeEEEEcCcccHHHHHHHhhc-CCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchH
Q 031484 12 KHNLFIIWQTGVEAFNEMESLVRN-HPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQ 90 (159)
Q Consensus 12 ~~~~~~~~~~G~~~~~~l~~~~~~-~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q 90 (159)
..++++++++|+.+.+.+.+.++. ..++.+.+|+++|.++|+.||++||++|++|++|++++|+|+|++|.++..+++|
T Consensus 209 ~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q 288 (365)
T 3s2u_A 209 EIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQ 288 (365)
T ss_dssp TTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECC-----CCHH
T ss_pred ccceEEEEecCccccccccceecccccccccccchhhhhhhhccceEEEecCCcchHHHHHHhCCCeEEeccCCCCCcHH
Confidence 346788899999877777666654 3589999999999999999999999999999999999999999999987778999
Q ss_pred HHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhhh
Q 031484 91 FKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLVE 158 (159)
Q Consensus 91 ~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 158 (159)
..|++++++.|.|++++.++++++.|.+++.++++||+.+++|++++++++..++++++++.|+++.+
T Consensus 289 ~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 289 TRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVAR 356 (365)
T ss_dssp HHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCCTTHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHc
Confidence 99999999999999999888889999999999999999999999999999999999999999998753
No 2
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.88 E-value=4e-21 Score=147.17 Aligned_cols=142 Identities=28% Similarity=0.431 Sum_probs=123.9
Q ss_pred CeeEEEEcCcccHHHHHHHhhcC--CCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHH
Q 031484 14 NLFIIWQTGVEAFNEMESLVRNH--PRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQF 91 (159)
Q Consensus 14 ~~~~~~~~G~~~~~~l~~~~~~~--~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~ 91 (159)
++++++++|++..+++++.++.. ++|.+.|+++++.++|+.||++|++||+++++|||++|+|+|+++.++. .++|.
T Consensus 212 ~~~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~sg~~~~~EAma~G~Pvi~~~~~g~-~~~q~ 290 (364)
T 1f0k_A 212 SVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHK-DRQQY 290 (364)
T ss_dssp GEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCCT-TCHHH
T ss_pred CcEEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEEECCchHHHHHHHHhCCCEEEeeCCCC-chhHH
Confidence 68877788887666776655432 5899999999999999999999999999999999999999999988653 46788
Q ss_pred HHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhhh
Q 031484 92 KNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLVE 158 (159)
Q Consensus 92 ~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 158 (159)
.+++.+.+.|.|+.++.++.+++.+++++.++ |++.+++|+++++++...++++++++.++++.+
T Consensus 291 ~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 355 (364)
T 1f0k_A 291 WNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATERVANEVSRVAR 355 (364)
T ss_dssp HHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCcEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHH
Confidence 89988999999999988777789999999998 999999999999999888899999999998765
No 3
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.86 E-value=2.9e-21 Score=149.62 Aligned_cols=146 Identities=13% Similarity=0.158 Sum_probs=123.3
Q ss_pred hHHHHHhhcCCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCC
Q 031484 4 LYYQMLMEKHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSP 83 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~ 83 (159)
.+.+. +..|++++++++|+...+.+.. ..+|+.+.+|.+ ..++|+.||++|+++|++|++|++++|+|+|++|..
T Consensus 241 ~~~~~-~~~p~~~~v~~~~~~~~~~l~~---~~~~v~~~~~~~-~~~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~ 315 (391)
T 3tsa_A 241 AVAAA-TELPGVEAVIAVPPEHRALLTD---LPDNARIAESVP-LNLFLRTCELVICAGGSGTAFTATRLGIPQLVLPQY 315 (391)
T ss_dssp HHHHH-HTSTTEEEEEECCGGGGGGCTT---CCTTEEECCSCC-GGGTGGGCSEEEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred HHHHh-ccCCCeEEEEEECCcchhhccc---CCCCEEEeccCC-HHHHHhhCCEEEeCCCHHHHHHHHHhCCCEEecCCc
Confidence 34444 5567899999988765443321 246899999986 467889999999999999999999999999999874
Q ss_pred CCCCchHHHHHHHHHHcCceeeecc--CCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhhh
Q 031484 84 NVAEGHQFKNASLMAKLADSRIITE--DELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLVE 158 (159)
Q Consensus 84 ~~~~~~q~~~~~~~~~~~~g~~~~~--~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 158 (159)
.+|..|++.+.+.|.|..+.. ++.+++.|.+++.++++|+.++++|++.++.+...++++++++.|++++.
T Consensus 316 ----~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 316 ----FDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp ----TTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred ----ccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 678899999999999999987 66679999999999999999999999999999988999999999988764
No 4
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.86 E-value=8e-21 Score=148.18 Aligned_cols=137 Identities=16% Similarity=0.223 Sum_probs=120.3
Q ss_pred CeeEEEEcCcc-cHHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHH
Q 031484 14 NLFIIWQTGVE-AFNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFK 92 (159)
Q Consensus 14 ~~~~~~~~G~~-~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~ 92 (159)
++++++++|++ ..+.+++ ..+|+.+.+|.++. ++|+.||++|+++|++|++|++++|+|+|++|.. .+|..
T Consensus 276 ~~~~v~~~g~~~~~~~l~~---~~~~v~~~~~~~~~-~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~----~~q~~ 347 (415)
T 3rsc_A 276 PWHVVMTLGGQVDPAALGD---LPPNVEAHRWVPHV-KVLEQATVCVTHGGMGTLMEALYWGRPLVVVPQS----FDVQP 347 (415)
T ss_dssp SCEEEEECTTTSCGGGGCC---CCTTEEEESCCCHH-HHHHHEEEEEESCCHHHHHHHHHTTCCEEECCCS----GGGHH
T ss_pred CcEEEEEeCCCCChHHhcC---CCCcEEEEecCCHH-HHHhhCCEEEECCcHHHHHHHHHhCCCEEEeCCc----chHHH
Confidence 38898888875 3333321 24699999999977 9999999999999999999999999999999874 68999
Q ss_pred HHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhhh
Q 031484 93 NASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLVE 158 (159)
Q Consensus 93 ~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 158 (159)
|++.+.+.|.|+.+..++++++.+.+++.++++|+++++.+++.++.+...++++++++.|.+++.
T Consensus 348 ~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 348 MARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEAMRGHVRRAGGAARAADAVEAYLA 413 (415)
T ss_dssp HHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999999999998887789999999999999999999999999999888999999999988764
No 5
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.86 E-value=1.2e-20 Score=146.72 Aligned_cols=134 Identities=14% Similarity=0.180 Sum_probs=109.2
Q ss_pred CeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHHH
Q 031484 14 NLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFKN 93 (159)
Q Consensus 14 ~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~~ 93 (159)
++++++++|+...+.+++ ..+|+.+.+|++ +.++|..||++|+++|++|++|++++|+|+|++|.. .+|..|
T Consensus 264 ~~~~v~~~~~~~~~~l~~---~~~~v~~~~~~~-~~~ll~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~----~~q~~~ 335 (398)
T 4fzr_A 264 GFEVVVAVSDKLAQTLQP---LPEGVLAAGQFP-LSAIMPACDVVVHHGGHGTTLTCLSEGVPQVSVPVI----AEVWDS 335 (398)
T ss_dssp TCEEEECCCC-----------CCTTEEEESCCC-HHHHGGGCSEEEECCCHHHHHHHHHTTCCEEECCCS----GGGHHH
T ss_pred CCEEEEEeCCcchhhhcc---CCCcEEEeCcCC-HHHHHhhCCEEEecCCHHHHHHHHHhCCCEEecCCc----hhHHHH
Confidence 788988888765444432 246999999995 899999999999999999999999999999999875 688999
Q ss_pred HHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 031484 94 ASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILS 155 (159)
Q Consensus 94 ~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 155 (159)
++.+.+.|.|+.++.++++++.|.+++.++++|++++++|++.++++...++++++++.|++
T Consensus 336 a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 336 ARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSSYVGNARRLAAEMATLPTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHTTSEEECC-------CHHHHHHHHHHCTHHHHHHHHHHHHHTTSCCHHHHHHHHTC
T ss_pred HHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 99999999999998876678999999999999999999999999999999999999988754
No 6
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.86 E-value=1e-20 Score=146.52 Aligned_cols=137 Identities=14% Similarity=0.212 Sum_probs=120.4
Q ss_pred CeeEEEEcCcc-cHHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecC-CCCCCchHH
Q 031484 14 NLFIIWQTGVE-AFNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPS-PNVAEGHQF 91 (159)
Q Consensus 14 ~~~~~~~~G~~-~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~-~~~~~~~q~ 91 (159)
++++++++|++ ..+.+++ ..+|+.+.+|.++. ++|+.||++|+++|++|++|++++|+|+|++|. . .+|.
T Consensus 260 ~~~~~~~~g~~~~~~~~~~---~~~~v~~~~~~~~~-~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~----~~q~ 331 (402)
T 3ia7_A 260 PWHVVMAIGGFLDPAVLGP---LPPNVEAHQWIPFH-SVLAHARACLTHGTTGAVLEAFAAGVPLVLVPHFA----TEAA 331 (402)
T ss_dssp SCEEEEECCTTSCGGGGCS---CCTTEEEESCCCHH-HHHTTEEEEEECCCHHHHHHHHHTTCCEEECGGGC----GGGH
T ss_pred CcEEEEEeCCcCChhhhCC---CCCcEEEecCCCHH-HHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCCCc----ccHH
Confidence 48888888875 3333321 24699999999987 999999999999999999999999999999987 5 6899
Q ss_pred HHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhhh
Q 031484 92 KNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLVE 158 (159)
Q Consensus 92 ~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 158 (159)
.|++.+.+.|.|..+..++++++.+.+++.++++|+++++.+++.++.+...++++++++.|++++.
T Consensus 332 ~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 332 PSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAVRERVRRMQRDILSSGGPARAADEVEAYLG 398 (402)
T ss_dssp HHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHh
Confidence 9999999999999998877779999999999999999999999999999888999999999988764
No 7
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.85 E-value=3.3e-20 Score=143.49 Aligned_cols=136 Identities=15% Similarity=0.215 Sum_probs=119.3
Q ss_pred CCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHH
Q 031484 13 HNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFK 92 (159)
Q Consensus 13 ~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~ 92 (159)
.++++++++|+...++++. ..+++.+ +|.+ +.++|+.||++|+++|++|++|++++|+|+|++|.. ++|..
T Consensus 243 ~~~~~~~~~g~~~~~~l~~---~~~~v~~-~~~~-~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~----~dq~~ 313 (384)
T 2p6p_A 243 WDVELIVAAPDTVAEALRA---EVPQARV-GWTP-LDVVAPTCDLLVHHAGGVSTLTGLSAGVPQLLIPKG----SVLEA 313 (384)
T ss_dssp TTCEEEEECCHHHHHHHHH---HCTTSEE-ECCC-HHHHGGGCSEEEECSCTTHHHHHHHTTCCEEECCCS----HHHHH
T ss_pred CCcEEEEEeCCCCHHhhCC---CCCceEE-cCCC-HHHHHhhCCEEEeCCcHHHHHHHHHhCCCEEEccCc----ccchH
Confidence 4789998888654444433 1468999 9996 689999999999999999999999999999999874 78999
Q ss_pred HHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhh
Q 031484 93 NASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLV 157 (159)
Q Consensus 93 ~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 157 (159)
|++.+.+.|.|+.++.++.+++.+.+++.+++.|+++++.+++.++.+...++.+++++.|.+++
T Consensus 314 ~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 314 PARRVADYGAAIALLPGEDSTEAIADSCQELQAKDTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 99999999999998877677999999999999999999999999999998899999999998875
No 8
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.85 E-value=1.3e-20 Score=148.56 Aligned_cols=138 Identities=12% Similarity=0.103 Sum_probs=120.4
Q ss_pred CCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHH
Q 031484 13 HNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFK 92 (159)
Q Consensus 13 ~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~ 92 (159)
.++++++++|+...+.++ ...+|+.+.+|+++ .++|..||++|+++|++|++|++++|+|+|++|.. ++|..
T Consensus 298 ~~~~~v~~~g~~~~~~l~---~~~~~v~~~~~~~~-~~ll~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~----~dQ~~ 369 (441)
T 2yjn_A 298 VDAEIIATFDAQQLEGVA---NIPDNVRTVGFVPM-HALLPTCAATVHHGGPGSWHTAAIHGVPQVILPDG----WDTGV 369 (441)
T ss_dssp SSSEEEECCCTTTTSSCS---SCCSSEEECCSCCH-HHHGGGCSEEEECCCHHHHHHHHHTTCCEEECCCS----HHHHH
T ss_pred CCCEEEEEECCcchhhhc---cCCCCEEEecCCCH-HHHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCCc----ccHHH
Confidence 368898888865433322 11458999999986 78999999999999999999999999999999974 78999
Q ss_pred HHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhhh
Q 031484 93 NASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLVE 158 (159)
Q Consensus 93 ~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 158 (159)
|++.+.+.|.|+.++.++++++.|.+++.++++|+.+++.+++.++.+...++.+++++.|++++.
T Consensus 370 na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 370 RAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAARMRDDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 999999999999998877789999999999999999999999999998888999999999988764
No 9
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.84 E-value=1.4e-20 Score=146.48 Aligned_cols=137 Identities=16% Similarity=0.258 Sum_probs=120.0
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHH
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFK 92 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~ 92 (159)
++++++++|+.. .+.+++ ..+++.+.+|. ++.++|+.||++|+++|++|++|++++|+|+|++|.. .+|..
T Consensus 271 ~~~~~~~~g~~~~~~~l~~---~~~~v~~~~~~-~~~~~l~~ad~~v~~~g~~t~~Ea~a~G~P~v~~p~~----~~q~~ 342 (412)
T 3otg_A 271 DADVLVASGPSLDVSGLGE---VPANVRLESWV-PQAALLPHVDLVVHHGGSGTTLGALGAGVPQLSFPWA----GDSFA 342 (412)
T ss_dssp SSEEEEECCSSCCCTTCCC---CCTTEEEESCC-CHHHHGGGCSEEEESCCHHHHHHHHHHTCCEEECCCS----TTHHH
T ss_pred CCEEEEEECCCCChhhhcc---CCCcEEEeCCC-CHHHHHhcCcEEEECCchHHHHHHHHhCCCEEecCCc----hhHHH
Confidence 678888888764 333321 14689999999 6999999999999999999999999999999999875 67888
Q ss_pred HHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhhh
Q 031484 93 NASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLVE 158 (159)
Q Consensus 93 ~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 158 (159)
+++.+.+.|.|..++.++.+++.|++++.++++|++++++|++.++++...++++++++.+++++.
T Consensus 343 ~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 343 NAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGARAVAAEIAAMPGPDEVVRLLPGFAS 408 (412)
T ss_dssp HHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC
T ss_pred HHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 999999999999998876679999999999999999999999999999888899999999988764
No 10
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.84 E-value=2.1e-20 Score=146.57 Aligned_cols=138 Identities=22% Similarity=0.277 Sum_probs=116.1
Q ss_pred CCeeEEEEcCccc-HHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHH
Q 031484 13 HNLFIIWQTGVEA-FNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQF 91 (159)
Q Consensus 13 ~~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~ 91 (159)
+++++++++|++. .+.+++ ..+++.+.+|.+++ ++|+.||++|+++|++|++|++++|+|+|++|.. ++|.
T Consensus 261 ~~~~~~~~~G~~~~~~~l~~---~~~~v~~~~~~~~~-~~l~~ad~~v~~~G~~t~~Ea~~~G~P~i~~p~~----~~q~ 332 (430)
T 2iyf_A 261 PGWHLVLQIGRKVTPAELGE---LPDNVEVHDWVPQL-AILRQADLFVTHAGAGGSQEGLATATPMIAVPQA----VDQF 332 (430)
T ss_dssp TTEEEEEECC---CGGGGCS---CCTTEEEESSCCHH-HHHTTCSEEEECCCHHHHHHHHHTTCCEEECCCS----HHHH
T ss_pred CCeEEEEEeCCCCChHHhcc---CCCCeEEEecCCHH-HHhhccCEEEECCCccHHHHHHHhCCCEEECCCc----cchH
Confidence 5789988888753 333321 13689999999987 8999999999999999999999999999999875 6889
Q ss_pred HHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhhh
Q 031484 92 KNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLVE 158 (159)
Q Consensus 92 ~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 158 (159)
.|++.+.+.|.|+.+..++.+++.|++++.++++|+++++.+++.++.+...++++++++.|++++.
T Consensus 333 ~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 399 (430)
T 2iyf_A 333 GNADMLQGLGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAEMAQEGGTRRAADLIEAELP 399 (430)
T ss_dssp HHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSC
T ss_pred HHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhh
Confidence 9999999999999988776679999999999999999999999988887766799999999988754
No 11
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.84 E-value=7.2e-20 Score=143.45 Aligned_cols=138 Identities=14% Similarity=0.241 Sum_probs=119.4
Q ss_pred CCeeEEEEcCccc-HHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHH
Q 031484 13 HNLFIIWQTGVEA-FNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQF 91 (159)
Q Consensus 13 ~~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~ 91 (159)
.++++++++|+.. .+++.. ..+|+.+.+|++++ ++|+.||++|+++|++|++|++++|+|+|++|.. .+|.
T Consensus 283 ~~~~~~~~~g~~~~~~~~~~---~~~~v~~~~~~~~~-~~l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~----~dQ~ 354 (424)
T 2iya_A 283 LDWHVVLSVGRFVDPADLGE---VPPNVEVHQWVPQL-DILTKASAFITHAGMGSTMEALSNAVPMVAVPQI----AEQT 354 (424)
T ss_dssp CSSEEEEECCTTSCGGGGCS---CCTTEEEESSCCHH-HHHTTCSEEEECCCHHHHHHHHHTTCCEEECCCS----HHHH
T ss_pred CCcEEEEEECCcCChHHhcc---CCCCeEEecCCCHH-HHHhhCCEEEECCchhHHHHHHHcCCCEEEecCc----cchH
Confidence 5789988888753 333211 14689999999987 8999999999999999999999999999999975 6899
Q ss_pred HHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhhh
Q 031484 92 KNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLVE 158 (159)
Q Consensus 92 ~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 158 (159)
.|++.+++.|.|+.+..++++++.+.+++.++++|+++++.+++.++.+...++.+++++.|++++.
T Consensus 355 ~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 355 MNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAAVRQEIREAGGARAAADILEGILA 421 (424)
T ss_dssp HHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 9999999999999988777789999999999999999999999988888778899999999988763
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.83 E-value=3.1e-19 Score=139.48 Aligned_cols=135 Identities=14% Similarity=0.186 Sum_probs=118.1
Q ss_pred CCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHH
Q 031484 13 HNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFK 92 (159)
Q Consensus 13 ~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~ 92 (159)
.++++++++|....+. ....+|+.+.+|.+. .++|..||++|+++|++|+.|++++|+|+|++|.. ++|..
T Consensus 248 ~~~~vv~~~g~~~~~~----~~~~~~v~~~~~~~~-~~ll~~~d~~v~~gG~~t~~Eal~~GvP~v~~p~~----~dQ~~ 318 (404)
T 3h4t_A 248 QGRRVVLSSGWAGLGR----IDEGDDCLVVGEVNH-QVLFGRVAAVVHHGGAGTTTAVTRAGAPQVVVPQK----ADQPY 318 (404)
T ss_dssp TTCCEEEECTTTTCCC----SSCCTTEEEESSCCH-HHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHH
T ss_pred CCCEEEEEeCCccccc----ccCCCCEEEecCCCH-HHHHhhCcEEEECCcHHHHHHHHHcCCCEEEcCCc----ccHHH
Confidence 4678888888653221 122569999999975 89999999999999999999999999999999875 78999
Q ss_pred HHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhhh
Q 031484 93 NASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLVE 158 (159)
Q Consensus 93 ~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 158 (159)
|++.+++.|.|..+..++++++.+.+++.++++ +++++.+++.+..+.. ++.+++++.|+.++.
T Consensus 319 na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 319 YAGRVADLGVGVAHDGPTPTVESLSAALATALT-PGIRARAAAVAGTIRT-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp HHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHh
Confidence 999999999999988777789999999999999 9999999999999988 999999999998765
No 13
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.82 E-value=2e-19 Score=124.83 Aligned_cols=113 Identities=13% Similarity=0.185 Sum_probs=94.0
Q ss_pred CeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHH--hhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHH
Q 031484 14 NLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAY--AAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQF 91 (159)
Q Consensus 14 ~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l--~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~ 91 (159)
++++++++|+...+. ..+|+.+.+|+++ .+++ +.||++|+++|++|++|++++|+|+|++|.. ++|.
T Consensus 51 ~~~~~~~~g~~~~~~------~~~~v~~~~~~~~-~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~----~~Q~ 119 (170)
T 2o6l_A 51 PQKVLWRFDGNKPDT------LGLNTRLYKWIPQ-NDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLF----ADQP 119 (170)
T ss_dssp SSEEEEECCSSCCTT------CCTTEEEESSCCH-HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHH
T ss_pred CCeEEEEECCcCccc------CCCcEEEecCCCH-HHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccch----hhHH
Confidence 467777776543211 1358999999986 6778 8999999999999999999999999999985 6889
Q ss_pred HHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHH
Q 031484 92 KNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERA 137 (159)
Q Consensus 92 ~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~ 137 (159)
.|++.+.+.|.|+.++.++++++.+.+++.+++.|+.+++.+++..
T Consensus 120 ~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~~~ 165 (170)
T 2o6l_A 120 DNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDPSYKENVMKLS 165 (170)
T ss_dssp HHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHC
T ss_pred HHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9999999999999998777779999999999999998776665543
No 14
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.81 E-value=5.2e-19 Score=138.47 Aligned_cols=135 Identities=14% Similarity=0.101 Sum_probs=115.9
Q ss_pred CeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHHH
Q 031484 14 NLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFKN 93 (159)
Q Consensus 14 ~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~~ 93 (159)
+.++++++|....+ . . ...+|+.+.+|+++ .++|..||++|+++|++|++|++++|+|+|++|.. ++|..|
T Consensus 266 ~~~~v~~~g~~~~~-~-~--~~~~~v~~~~~~~~-~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~----~dQ~~n 336 (415)
T 1iir_A 266 GRRVILSRGWADLV-L-P--DDGADCFAIGEVNH-QVLFGRVAAVIHHGGAGTTHVAARAGAPQILLPQM----ADQPYY 336 (415)
T ss_dssp TCCEEECTTCTTCC-C-S--SCGGGEEECSSCCH-HHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHH
T ss_pred CCeEEEEeCCCccc-c-c--CCCCCEEEeCcCCh-HHHHhhCCEEEeCCChhHHHHHHHcCCCEEECCCC----CccHHH
Confidence 46788888865321 1 0 11248999999986 57899999999999999999999999999999974 689999
Q ss_pred HHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhhh
Q 031484 94 ASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLVE 158 (159)
Q Consensus 94 ~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 158 (159)
++.+++.|.|+.++.++.+++.+.+++.++ .|+.+++.+++.++.+...++.+++++.|+++++
T Consensus 337 a~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 337 AGRVAELGVGVAHDGPIPTFDSLSAALATA-LTPETHARATAVAGTIRTDGAAVAARLLLDAVSR 400 (415)
T ss_dssp HHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHh
Confidence 999999999999887777899999999999 9999999999999998888899999999988764
No 15
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.81 E-value=1.2e-19 Score=141.18 Aligned_cols=134 Identities=16% Similarity=0.259 Sum_probs=114.6
Q ss_pred CCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHH
Q 031484 13 HNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFK 92 (159)
Q Consensus 13 ~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~ 92 (159)
.++++++++|+...+.++. ..+|+.+.+|+ ++.++|..||++|+++|++|++|++++|+|+|++|.. .+|..
T Consensus 262 ~~~~~v~~~g~~~~~~l~~---~~~~v~~~~~~-~~~~ll~~ad~~v~~~G~~t~~Eal~~G~P~v~~p~~----~dq~~ 333 (398)
T 3oti_A 262 VDADFVLALGDLDISPLGT---LPRNVRAVGWT-PLHTLLRTCTAVVHHGGGGTVMTAIDAGIPQLLAPDP----RDQFQ 333 (398)
T ss_dssp SSSEEEEECTTSCCGGGCS---CCTTEEEESSC-CHHHHHTTCSEEEECCCHHHHHHHHHHTCCEEECCCT----TCCSS
T ss_pred CCCEEEEEECCcChhhhcc---CCCcEEEEccC-CHHHHHhhCCEEEECCCHHHHHHHHHhCCCEEEcCCC----chhHH
Confidence 3789999988865433321 24699999999 6899999999999999999999999999999999874 56777
Q ss_pred HH--HHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhhh
Q 031484 93 NA--SLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLVE 158 (159)
Q Consensus 93 ~~--~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 158 (159)
|+ +.+.+.|.|+.++.++.+++.+. ++++|++++++|++.++.+...++++++++.|++++.
T Consensus 334 ~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 397 (398)
T 3oti_A 334 HTAREAVSRRGIGLVSTSDKVDADLLR----RLIGDESLRTAAREVREEMVALPTPAETVRRIVERIS 397 (398)
T ss_dssp CTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhc
Confidence 88 99999999999987766677766 8889999999999999999999999999999988764
No 16
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.81 E-value=1.3e-18 Score=136.19 Aligned_cols=134 Identities=13% Similarity=0.078 Sum_probs=115.1
Q ss_pred CeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHHH
Q 031484 14 NLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFKN 93 (159)
Q Consensus 14 ~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~~ 93 (159)
++++++++|....+ . ....+|+.+.+|++ +.++|..||++|+++|++|++|++++|+|+|++|.. ++|..|
T Consensus 267 ~~~~v~~~g~~~~~-~---~~~~~~v~~~~~~~-~~~ll~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~----~dQ~~n 337 (416)
T 1rrv_A 267 GRRVILSRGWTELV-L---PDDRDDCFAIDEVN-FQALFRRVAAVIHHGSAGTEHVATRAGVPQLVIPRN----TDQPYF 337 (416)
T ss_dssp TCCEEEECTTTTCC-C---SCCCTTEEEESSCC-HHHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCS----BTHHHH
T ss_pred CCeEEEEeCCcccc-c---cCCCCCEEEeccCC-hHHHhccCCEEEecCChhHHHHHHHcCCCEEEccCC----CCcHHH
Confidence 57888888875322 1 11235899999998 688999999999999999999999999999999974 789999
Q ss_pred HHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHH-HHhhh
Q 031484 94 ASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHI-LSLVE 158 (159)
Q Consensus 94 ~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~ 158 (159)
++.+++.|.|+.++.++.+++.+.+++.++ .|+++++.+++.++.+...++. ++++.| +.+++
T Consensus 338 a~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 338 AGRVAALGIGVAHDGPTPTFESLSAALTTV-LAPETRARAEAVAGMVLTDGAA-AAADLVLAAVGR 401 (416)
T ss_dssp HHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCCCHHH-HHHHHHHHHHHC
T ss_pred HHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhhcCcH-HHHHHHHHHHhc
Confidence 999999999999887777899999999999 9999999999998888888888 999988 77653
No 17
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.77 E-value=1.7e-18 Score=133.35 Aligned_cols=146 Identities=12% Similarity=0.166 Sum_probs=115.4
Q ss_pred ChhhHHHHHhhcCCeeEEEEcCcc--cHHHHHHHhhcCCCeEEeccc--ccHHHHHhhCceEEecCChHHHHHHHHhCCc
Q 031484 1 MLNLYYQMLMEKHNLFIIWQTGVE--AFNEMESLVRNHPRLLLTPFL--HSMDLAYAAADLIVSRAGAMTCYEILATGKP 76 (159)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~G~~--~~~~l~~~~~~~~~v~~~~~~--~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P 76 (159)
|++++..+.+.+|++++++++|++ ..+.+++.++..++|.++|+. .++.++|+.||++|+.||+. ++|||++|+|
T Consensus 225 li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~Sg~~-~lEA~a~G~P 303 (384)
T 1vgv_A 225 ICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGGI-QEEAPSLGKP 303 (384)
T ss_dssp HHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESSSTG-GGTGGGGTCC
T ss_pred HHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcEEEECCcch-HHHHHHcCCC
Confidence 356777777778899998877764 345666554444689996554 47999999999999988765 7899999999
Q ss_pred EEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHh
Q 031484 77 SILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSL 156 (159)
Q Consensus 77 ~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 156 (159)
+|+++..+ +. .+ +.+.|.|+.++. + ++.+++++.++++|++.+++|+++++++...++++++++.+.++
T Consensus 304 vI~~~~~~---~~----~e-~v~~g~g~lv~~-d--~~~la~~i~~ll~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 372 (384)
T 1vgv_A 304 VLVMRDTT---ER----PE-AVTAGTVRLVGT-D--KQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALKNN 372 (384)
T ss_dssp EEEESSCC---SC----HH-HHHHTSEEEECS-S--HHHHHHHHHHHHHCHHHHHHHHSSCCTTCCSCHHHHHHHHHHHT
T ss_pred EEEccCCC---Cc----ch-hhhCCceEEeCC-C--HHHHHHHHHHHHhChHHHhhhhhccCCCcCCCHHHHHHHHHHHH
Confidence 99997631 21 12 344568988865 3 89999999999999999999999988888888999999999887
Q ss_pred hh
Q 031484 157 VE 158 (159)
Q Consensus 157 ~~ 158 (159)
.+
T Consensus 373 ~~ 374 (384)
T 1vgv_A 373 RI 374 (384)
T ss_dssp CC
T ss_pred HH
Confidence 54
No 18
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.76 E-value=5e-18 Score=131.55 Aligned_cols=133 Identities=15% Similarity=0.185 Sum_probs=107.0
Q ss_pred CCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHH
Q 031484 13 HNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFK 92 (159)
Q Consensus 13 ~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~ 92 (159)
.+.++++.+|+...+... ...+|+.+.+|.| +.++|..+|++|+++|++|++|++++|+|+|++|.. .+|..
T Consensus 267 ~~~~~v~~~~~~~~~~~~---~~~~~v~~~~~~p-~~~lL~~~~~~v~h~G~~s~~Eal~~GvP~v~~P~~----~dQ~~ 338 (400)
T 4amg_A 267 VDAEFVLTLGGGDLALLG---ELPANVRVVEWIP-LGALLETCDAIIHHGGSGTLLTALAAGVPQCVIPHG----SYQDT 338 (400)
T ss_dssp SSSEEEEECCTTCCCCCC---CCCTTEEEECCCC-HHHHHTTCSEEEECCCHHHHHHHHHHTCCEEECCC-------CHH
T ss_pred cCceEEEEecCccccccc---cCCCCEEEEeecC-HHHHhhhhhheeccCCccHHHHHHHhCCCEEEecCc----ccHHH
Confidence 566777777665322211 1146899999997 678999999999999999999999999999999985 68899
Q ss_pred HHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhh
Q 031484 93 NASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLV 157 (159)
Q Consensus 93 ~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 157 (159)
|+..+++.|.|+.++..+.+ .++|.++++|+.+++.+++-++.+....+..++++.|+++.
T Consensus 339 na~~v~~~G~g~~l~~~~~~----~~al~~lL~d~~~r~~a~~l~~~~~~~~~~~~~a~~le~lA 399 (400)
T 4amg_A 339 NRDVLTGLGIGFDAEAGSLG----AEQCRRLLDDAGLREAALRVRQEMSEMPPPAETAAXLVALA 399 (400)
T ss_dssp HHHHHHHHTSEEECCTTTCS----HHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHC
T ss_pred HHHHHHHCCCEEEcCCCCch----HHHHHHHHcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhh
Confidence 99999999999988776544 45678899999999988888888877778889999998874
No 19
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.75 E-value=2.2e-17 Score=127.06 Aligned_cols=146 Identities=14% Similarity=0.125 Sum_probs=112.9
Q ss_pred ChhhHHHHHhhcCCeeEEEEcCcc--cHHHHHHHhhcCCCeEEecccc--cHHHHHhhCceEEecCChHHHHHHHHhCCc
Q 031484 1 MLNLYYQMLMEKHNLFIIWQTGVE--AFNEMESLVRNHPRLLLTPFLH--SMDLAYAAADLIVSRAGAMTCYEILATGKP 76 (159)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~G~~--~~~~l~~~~~~~~~v~~~~~~~--~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P 76 (159)
|++++..+.+.+|++++++++|++ ..+.+++.++..++|.++++.+ ++..+|+.||++|+.||+. ++||+++|+|
T Consensus 217 ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S~g~-~lEA~a~G~P 295 (376)
T 1v4v_A 217 LAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDSGGL-QEEGAALGVP 295 (376)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESCHHH-HHHHHHTTCC
T ss_pred HHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECCcCH-HHHHHHcCCC
Confidence 356777777778899988877864 3566666554446899994442 7899999999999988654 6799999999
Q ss_pred EEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHh
Q 031484 77 SILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSL 156 (159)
Q Consensus 77 ~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 156 (159)
+|+++..+ +.+. +.+.|.|+.++. +++.|++++.++++|++.+++|++++..+...++++++++.+.++
T Consensus 296 vI~~~~~~---~~~~-----~~~~g~g~lv~~---d~~~la~~i~~ll~d~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~ 364 (376)
T 1v4v_A 296 VVVLRNVT---ERPE-----GLKAGILKLAGT---DPEGVYRVVKGLLENPEELSRMRKAKNPYGDGKAGLMVARGVAWR 364 (376)
T ss_dssp EEECSSSC---SCHH-----HHHHTSEEECCS---CHHHHHHHHHHHHTCHHHHHHHHHSCCSSCCSCHHHHHHHHHHHH
T ss_pred EEeccCCC---cchh-----hhcCCceEECCC---CHHHHHHHHHHHHhChHhhhhhcccCCCCCCChHHHHHHHHHHHH
Confidence 99986431 2222 345678887752 389999999999999999999998777777778999999999887
Q ss_pred hh
Q 031484 157 VE 158 (159)
Q Consensus 157 ~~ 158 (159)
++
T Consensus 365 ~~ 366 (376)
T 1v4v_A 365 LG 366 (376)
T ss_dssp TT
T ss_pred hc
Confidence 64
No 20
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.75 E-value=2.5e-17 Score=128.97 Aligned_cols=145 Identities=14% Similarity=0.170 Sum_probs=117.1
Q ss_pred hhhHHHHHhhcCCeeEEEEcCccc--HHHHHHHhhcCCCeEEecccc--cHHHHHhhCceEEecCChHHHHHHHHhCCcE
Q 031484 2 LNLYYQMLMEKHNLFIIWQTGVEA--FNEMESLVRNHPRLLLTPFLH--SMDLAYAAADLIVSRAGAMTCYEILATGKPS 77 (159)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~G~~~--~~~l~~~~~~~~~v~~~~~~~--~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~ 77 (159)
++++.++.+.+|++++++++|++. .+.+++.+...+++.++++.+ ++..+|+.||++++.||+.+ .|++++|+|+
T Consensus 245 l~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~SGg~~-~EA~a~g~Pv 323 (403)
T 3ot5_A 245 FEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDSGGVQ-EEAPGMGVPV 323 (403)
T ss_dssp HHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECCHHHH-HHGGGTTCCE
T ss_pred HHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECCccHH-HHHHHhCCCE
Confidence 466777777789999998888652 444554444457899999886 89999999999999998776 8999999999
Q ss_pred EEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhh
Q 031484 78 ILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLV 157 (159)
Q Consensus 78 I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 157 (159)
|+++.. .+.+. ..+.|.++.++. + ++.+.+++.++++|+..+++|++++..++.+++++++++.|.+++
T Consensus 324 V~~~~~---~~~~e-----~v~~g~~~lv~~-d--~~~l~~ai~~ll~~~~~~~~m~~~~~~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 324 LVLRDT---TERPE-----GIEAGTLKLIGT-N--KENLIKEALDLLDNKESHDKMAQAANPYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp EECCSS---CSCHH-----HHHHTSEEECCS-C--HHHHHHHHHHHHHCHHHHHHHHHSCCTTCCSCHHHHHHHHHHHHH
T ss_pred EEecCC---Ccchh-----heeCCcEEEcCC-C--HHHHHHHHHHHHcCHHHHHHHHhhcCcccCCcHHHHHHHHHHHHh
Confidence 998543 13332 346778887764 3 899999999999999999999998888989999999999998876
Q ss_pred h
Q 031484 158 E 158 (159)
Q Consensus 158 ~ 158 (159)
+
T Consensus 393 ~ 393 (403)
T 3ot5_A 393 E 393 (403)
T ss_dssp T
T ss_pred C
Confidence 4
No 21
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.74 E-value=3.2e-17 Score=125.76 Aligned_cols=146 Identities=14% Similarity=0.201 Sum_probs=112.5
Q ss_pred ChhhHHHHHhhcCCeeEEEEcCccc--HHHHHHHhhcCCCeEEecccc--cHHHHHhhCceEEecCChHHHHHHHHhCCc
Q 031484 1 MLNLYYQMLMEKHNLFIIWQTGVEA--FNEMESLVRNHPRLLLTPFLH--SMDLAYAAADLIVSRAGAMTCYEILATGKP 76 (159)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~G~~~--~~~l~~~~~~~~~v~~~~~~~--~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P 76 (159)
|++++..+.+.+|++++++..|+.. .+.+++.++..++|.++|+.+ ++..+|+.||++|+.|| ++++|||++|+|
T Consensus 225 li~a~~~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~sg-~~~lEA~a~G~P 303 (375)
T 3beo_A 225 MFRAIKRLVDKHEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDSG-GVQEEAPSLGVP 303 (375)
T ss_dssp HHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECCH-HHHHHHHHHTCC
T ss_pred HHHHHHHHHhhCCCeEEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECCC-ChHHHHHhcCCC
Confidence 3567777777788999876656432 344444443346899977664 78999999999999885 458999999999
Q ss_pred EEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHh
Q 031484 77 SILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSL 156 (159)
Q Consensus 77 ~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 156 (159)
+|+++..+ +. .+ +.+.|.|+.++. + ++++++++.++++|++.+++|+++++++...++++++++.+.++
T Consensus 304 vi~~~~~~---~~----~e-~v~~g~g~~v~~-d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 372 (375)
T 3beo_A 304 VLVLRDTT---ER----PE-GIEAGTLKLAGT-D--EETIFSLADELLSDKEAHDKMSKASNPYGDGRASERIVEAILKH 372 (375)
T ss_dssp EEECSSCC---SC----HH-HHHTTSEEECCS-C--HHHHHHHHHHHHHCHHHHHHHCCCCCTTCCSCHHHHHHHHHHHH
T ss_pred EEEecCCC---CC----ce-eecCCceEEcCC-C--HHHHHHHHHHHHhChHhHhhhhhcCCCCCCCcHHHHHHHHHHHH
Confidence 99985421 21 12 345668888864 4 89999999999999999999999888888788999999999988
Q ss_pred hh
Q 031484 157 VE 158 (159)
Q Consensus 157 ~~ 158 (159)
++
T Consensus 373 ~~ 374 (375)
T 3beo_A 373 FN 374 (375)
T ss_dssp TT
T ss_pred hh
Confidence 75
No 22
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.72 E-value=1.4e-16 Score=123.22 Aligned_cols=147 Identities=14% Similarity=0.157 Sum_probs=118.2
Q ss_pred ChhhHHHHHhhcCCeeEEEEcCcccHHHHHHHhhc-CCCeEEecccc--cHHHHHhhCceEEecCC-----hHHHHHHHH
Q 031484 1 MLNLYYQMLMEKHNLFIIWQTGVEAFNEMESLVRN-HPRLLLTPFLH--SMDLAYAAADLIVSRAG-----AMTCYEILA 72 (159)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~-~~~v~~~~~~~--~~~~~l~~ad~~i~~~G-----~~t~~Eal~ 72 (159)
+++++..+.+.+++++++++++... +.+++.++. .++|.+.|+++ ++.++|+.||++|..+. +.+++|||+
T Consensus 227 li~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a 305 (406)
T 2gek_A 227 LLAALPKLVARFPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMA 305 (406)
T ss_dssp HHHHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHH
Confidence 3567778877789999977655544 677766544 46899999996 56999999999997653 678999999
Q ss_pred hCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 031484 73 TGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQH 152 (159)
Q Consensus 73 ~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (159)
+|+|+|+.+.+ ...+.+.+...|+.++.++ ++++++++.++++|+..++++++++++.....+++++++.
T Consensus 306 ~G~PvI~~~~~--------~~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 375 (406)
T 2gek_A 306 AGTAVVASDLD--------AFRRVLADGDAGRLVPVDD--ADGMAAALIGILEDDQLRAGYVARASERVHRYDWSVVSAQ 375 (406)
T ss_dssp HTCEEEECCCH--------HHHHHHTTTTSSEECCTTC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHHHHHHH
T ss_pred cCCCEEEecCC--------cHHHHhcCCCceEEeCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 99999998642 2445566667888887766 8999999999999999999999999888777789999888
Q ss_pred HHHhhh
Q 031484 153 ILSLVE 158 (159)
Q Consensus 153 i~~~~~ 158 (159)
+.+++.
T Consensus 376 ~~~~~~ 381 (406)
T 2gek_A 376 IMRVYE 381 (406)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887653
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.71 E-value=3.9e-17 Score=118.31 Aligned_cols=109 Identities=15% Similarity=0.140 Sum_probs=83.5
Q ss_pred CeEEecccccHHHHHh-hCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHH
Q 031484 38 RLLLTPFLHSMDLAYA-AADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITL 116 (159)
Q Consensus 38 ~v~~~~~~~~~~~~l~-~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l 116 (159)
++.+++|+++|..+|+ .||++||++|++|++|++++|+|+|++|.++..++||..|++++.+.|.++++. ++.|
T Consensus 115 ~v~v~~f~~~m~~~l~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~~-----~~~L 189 (224)
T 2jzc_A 115 KVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCA-----PTET 189 (224)
T ss_dssp EEEECCSSSSHHHHHHHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEEC-----SCTT
T ss_pred eEEEeeccchHHHHHHhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEcC-----HHHH
Confidence 5678899999999999 999999999999999999999999999998767789999999999999987762 5677
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHHhhhC
Q 031484 117 ETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILSLVES 159 (159)
Q Consensus 117 ~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 159 (159)
.+++.++..+.. ....+ .......+.+.|.+.++|
T Consensus 190 ~~~i~~l~~~~~-------~~~~~-~~~~~~~~~~~l~~~~~~ 224 (224)
T 2jzc_A 190 GLIAGLRASQTE-------KLKPF-PVSHNPSFERLLVETIYS 224 (224)
T ss_dssp THHHHHHHHTTC-------CCCSC-CCSSSCTHHHHHHHHCCC
T ss_pred HHHHHHHHhhhh-------ccCCC-CCCCHHHHHHHHHHHhcC
Confidence 777776622110 01112 222445666777666554
No 24
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.71 E-value=3.1e-16 Score=124.59 Aligned_cols=108 Identities=20% Similarity=0.220 Sum_probs=90.9
Q ss_pred CCeeEEEEcCcccHH----HHHHHhhcCCCeEEecccccHHHHHh--hCceEEecCChHHHHHHHHhCCcEEEecCCCCC
Q 031484 13 HNLFIIWQTGVEAFN----EMESLVRNHPRLLLTPFLHSMDLAYA--AADLIVSRAGAMTCYEILATGKPSILIPSPNVA 86 (159)
Q Consensus 13 ~~~~~~~~~G~~~~~----~l~~~~~~~~~v~~~~~~~~~~~~l~--~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~ 86 (159)
.+++|+|++|+...+ .+.+.. .+|+.+.+|.|+. ++|+ .+|++|||+|++|++|++++|+|+|++|..
T Consensus 299 ~~~~~lw~~~~~~~~~l~~~~~~~~--~~~~~v~~w~pq~-~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~--- 372 (456)
T 2c1x_A 299 SRVPFIWSLRDKARVHLPEGFLEKT--RGYGMVVPWAPQA-EVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFF--- 372 (456)
T ss_dssp HTCCEEEECCGGGGGGSCTTHHHHH--TTTEEEESCCCHH-HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS---
T ss_pred cCCeEEEEECCcchhhCCHHHHhhc--CCceEEecCCCHH-HHhcCCcCCEEEecCCcchHHHHHHhCceEEecCCh---
Confidence 467899999875322 222211 3589999999975 7887 789999999999999999999999999985
Q ss_pred CchHHHHHHHHHHc-CceeeeccCCCChhHHHHHHHHHhcCH
Q 031484 87 EGHQFKNASLMAKL-ADSRIITEDELDSITLETTIEEILGNE 127 (159)
Q Consensus 87 ~~~q~~~~~~~~~~-~~g~~~~~~~~~~~~l~~~l~~ll~~~ 127 (159)
.+|..|++++++. |.|+.+..++++.+.+.+++.+++.|+
T Consensus 373 -~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~ 413 (456)
T 2c1x_A 373 -GDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQE 413 (456)
T ss_dssp -TTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSH
T ss_pred -hhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCC
Confidence 6889999999999 999999877788999999999999987
No 25
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.71 E-value=6.8e-17 Score=126.22 Aligned_cols=142 Identities=11% Similarity=0.167 Sum_probs=111.4
Q ss_pred hhhHHHHHhhcCCeeEEEEcCcc--cHHHHHHHhhcCCCeEEecccc--cHHHHHhhCceEEecCChHHHHHHHHhCCcE
Q 031484 2 LNLYYQMLMEKHNLFIIWQTGVE--AFNEMESLVRNHPRLLLTPFLH--SMDLAYAAADLIVSRAGAMTCYEILATGKPS 77 (159)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~G~~--~~~~l~~~~~~~~~v~~~~~~~--~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~ 77 (159)
++++.++.+.+|++++++++|++ ..+.+++.+...+++.++++.+ ++..+|+.||++|+.||+.+ .||+++|+|+
T Consensus 251 l~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~SGg~~-~EA~a~G~Pv 329 (396)
T 3dzc_A 251 CQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDSGGIQ-EEAPSLGKPV 329 (396)
T ss_dssp HHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEESCSGGG-TTGGGGTCCE
T ss_pred HHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEECCccHH-HHHHHcCCCE
Confidence 56777777778999998888864 2455555444457899988773 78899999999999998554 8999999999
Q ss_pred EEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 031484 78 ILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHILS 155 (159)
Q Consensus 78 I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 155 (159)
|+++..+ +.+ .+.+.|.++.++. + ++.|.+++.++++|++.+++|++++..++.+++++++++.|.+
T Consensus 330 V~~~~~~---~~~-----e~v~~G~~~lv~~-d--~~~l~~ai~~ll~d~~~~~~m~~~~~~~~~~~aa~ri~~~l~~ 396 (396)
T 3dzc_A 330 LVMRETT---ERP-----EAVAAGTVKLVGT-N--QQQICDALSLLLTDPQAYQAMSQAHNPYGDGKACQRIADILAK 396 (396)
T ss_dssp EECCSSC---SCH-----HHHHHTSEEECTT-C--HHHHHHHHHHHHHCHHHHHHHHTSCCTTCCSCHHHHHHHHHHC
T ss_pred EEccCCC---cch-----HHHHcCceEEcCC-C--HHHHHHHHHHHHcCHHHHHHHhhccCCCcCChHHHHHHHHHhC
Confidence 9974321 211 2345677777654 3 8999999999999999999999999899999999999988753
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.71 E-value=1.3e-16 Score=122.85 Aligned_cols=148 Identities=14% Similarity=0.147 Sum_probs=117.5
Q ss_pred ChhhHHHHHhhcCCeeEEEEcCcccHHHHHHHhhc-CCCeEEeccc--ccHHHHHhhCceEEe-----------cCChHH
Q 031484 1 MLNLYYQMLMEKHNLFIIWQTGVEAFNEMESLVRN-HPRLLLTPFL--HSMDLAYAAADLIVS-----------RAGAMT 66 (159)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~-~~~v~~~~~~--~~~~~~l~~ad~~i~-----------~~G~~t 66 (159)
+++++..+.+.++++++++++++...+.+++++.. .++|.++|++ .++.++|+.||++|. .+.+.+
T Consensus 216 li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~ 295 (394)
T 3okp_A 216 LIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIV 295 (394)
T ss_dssp HHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHH
T ss_pred HHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcH
Confidence 35778888888899999877555556777766533 3689999999 589999999999996 334688
Q ss_pred HHHHHHhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-Ch
Q 031484 67 CYEILATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKP-GA 145 (159)
Q Consensus 67 ~~Eal~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~-~~ 145 (159)
++|||++|+|+|+.+.++ ..+.+.+ +.|+.++.++ ++.+++++.++++|++.++++++++++.... .+
T Consensus 296 ~~Ea~a~G~PvI~~~~~~--------~~e~i~~-~~g~~~~~~d--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 364 (394)
T 3okp_A 296 YLEAQACGVPVIAGTSGG--------APETVTP-ATGLVVEGSD--VDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWS 364 (394)
T ss_dssp HHHHHHTTCCEEECSSTT--------GGGGCCT-TTEEECCTTC--HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHHcCCCEEEeCCCC--------hHHHHhc-CCceEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999987642 1223333 4888888766 8999999999999999999999998887654 68
Q ss_pred HHHHHHHHHHhhhC
Q 031484 146 SADIAQHILSLVES 159 (159)
Q Consensus 146 ~~~~~~~i~~~~~~ 159 (159)
++.+++.+.+++.+
T Consensus 365 ~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 365 WEIMGERLTNILQS 378 (394)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998887653
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.69 E-value=2.8e-16 Score=122.89 Aligned_cols=148 Identities=16% Similarity=0.190 Sum_probs=113.4
Q ss_pred ChhhHHHHHhhcC--CeeEEEEcC----cccHHHHHHHhhc---CCCeEEeccc--ccHHHHHhhCceEEecC----ChH
Q 031484 1 MLNLYYQMLMEKH--NLFIIWQTG----VEAFNEMESLVRN---HPRLLLTPFL--HSMDLAYAAADLIVSRA----GAM 65 (159)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~G----~~~~~~l~~~~~~---~~~v~~~~~~--~~~~~~l~~ad~~i~~~----G~~ 65 (159)
+++++..+...+| +++++++++ +...+.++++++. .++|.++|++ +++..+|+.||+++..+ .+.
T Consensus 261 li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~ 340 (438)
T 3c48_A 261 LIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGL 340 (438)
T ss_dssp HHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCH
T ss_pred HHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCch
Confidence 3577788877776 788877655 2334455554432 3589999999 47999999999999765 267
Q ss_pred HHHHHHHhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh
Q 031484 66 TCYEILATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGA 145 (159)
Q Consensus 66 t~~Eal~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~ 145 (159)
+++|||++|+|+|+.+.++ ..+.+.+.+.|++++.++ ++.+++++.++++|++.+++|++++++.....+
T Consensus 341 ~~~Eama~G~PvI~~~~~~--------~~e~i~~~~~g~~~~~~d--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s 410 (438)
T 3c48_A 341 VAMEAQASGTPVIAARVGG--------LPIAVAEGETGLLVDGHS--PHAWADALATLLDDDETRIRMGEDAVEHARTFS 410 (438)
T ss_dssp HHHHHHHTTCCEEEESCTT--------HHHHSCBTTTEEEESSCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEecCCCC--------hhHHhhCCCcEEECCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCC
Confidence 8999999999999987541 344555666888887766 899999999999999999999999888765578
Q ss_pred HHHHHHHHHHhhh
Q 031484 146 SADIAQHILSLVE 158 (159)
Q Consensus 146 ~~~~~~~i~~~~~ 158 (159)
++++++.+.+++.
T Consensus 411 ~~~~~~~~~~~~~ 423 (438)
T 3c48_A 411 WAATAAQLSSLYN 423 (438)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888777653
No 28
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.69 E-value=4.3e-16 Score=121.30 Aligned_cols=146 Identities=12% Similarity=0.108 Sum_probs=113.8
Q ss_pred ChhhHHHHHhhcCCeeEEEEcCccc-----HHHHHHHh---hcCCCeEEecccc-----cHHHHHhhCceEEecC----C
Q 031484 1 MLNLYYQMLMEKHNLFIIWQTGVEA-----FNEMESLV---RNHPRLLLTPFLH-----SMDLAYAAADLIVSRA----G 63 (159)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~G~~~-----~~~l~~~~---~~~~~v~~~~~~~-----~~~~~l~~ad~~i~~~----G 63 (159)
|++++..+.+.+|++++++++++.. .+.++++. ...++|.++|+.+ ++..+|+.||+++..+ .
T Consensus 249 li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~ 328 (416)
T 2x6q_A 249 VIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGF 328 (416)
T ss_dssp HHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSS
T ss_pred HHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCC
Confidence 3677888888889999977655431 23344333 2246999999775 7999999999999766 4
Q ss_pred hHHHHHHHHhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCC-
Q 031484 64 AMTCYEILATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAK- 142 (159)
Q Consensus 64 ~~t~~Eal~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~- 142 (159)
+.+++|||++|+|+|+++.+ ...+.+.+.+.|+.++ + ++.+++++.++++|++.++++++++++...
T Consensus 329 ~~~~lEAma~G~PvI~~~~~--------g~~e~i~~~~~g~l~~--d--~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 396 (416)
T 2x6q_A 329 GLTVTEAMWKGKPVIGRAVG--------GIKFQIVDGETGFLVR--D--ANEAVEVVLYLLKHPEVSKEMGAKAKERVRK 396 (416)
T ss_dssp CHHHHHHHHTTCCEEEESCH--------HHHHHCCBTTTEEEES--S--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHcCCCEEEccCC--------CChhheecCCCeEEEC--C--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 78899999999999998642 2445555667888886 3 899999999999999999999999887764
Q ss_pred CChHHHHHHHHHHhhh
Q 031484 143 PGASADIAQHILSLVE 158 (159)
Q Consensus 143 ~~~~~~~~~~i~~~~~ 158 (159)
..+++++++.+.+++.
T Consensus 397 ~fs~~~~~~~~~~~~~ 412 (416)
T 2x6q_A 397 NFIITKHMERYLDILN 412 (416)
T ss_dssp HTBHHHHHHHHHHHHH
T ss_pred HcCHHHHHHHHHHHHH
Confidence 5688899888888764
No 29
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.69 E-value=7e-16 Score=108.93 Aligned_cols=128 Identities=14% Similarity=0.132 Sum_probs=102.3
Q ss_pred hhhHHHHH--hhcCCeeEEEEcCcc--cHHHHHHHhhcCCCeEE-ecccc--cHHHHHhhCceEEecC----ChHHHHHH
Q 031484 2 LNLYYQML--MEKHNLFIIWQTGVE--AFNEMESLVRNHPRLLL-TPFLH--SMDLAYAAADLIVSRA----GAMTCYEI 70 (159)
Q Consensus 2 ~~~~~~~~--~~~~~~~~~~~~G~~--~~~~l~~~~~~~~~v~~-~~~~~--~~~~~l~~ad~~i~~~----G~~t~~Ea 70 (159)
++++..+. +.+++++++++++.. ..+.+++.++..++|++ +|+++ ++..+|+.||+++..+ .+.+++|+
T Consensus 56 i~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea 135 (200)
T 2bfw_A 56 LKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEA 135 (200)
T ss_dssp HHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHH
T ss_pred HHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHH
Confidence 56777776 677899998776555 45667666655459999 99997 8999999999999755 26789999
Q ss_pred HHhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhc-CHHHHHHHHHHHHhc
Q 031484 71 LATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILG-NEALMAEMSERALKA 140 (159)
Q Consensus 71 l~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~-~~~~~~~~~~~~~~~ 140 (159)
|++|+|+|+.+.+ ...+.+ +.+.|+.+..++ ++.+++++.++++ |+..+++|++++++.
T Consensus 136 ~a~G~PvI~~~~~--------~~~e~~-~~~~g~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~a~~~ 195 (200)
T 2bfw_A 136 MCLGAIPIASAVG--------GLRDII-TNETGILVKAGD--PGELANAILKALELSRSDLSKFRENCKKR 195 (200)
T ss_dssp HHTTCEEEEESCH--------HHHHHC-CTTTCEEECTTC--HHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEeCCC--------ChHHHc-CCCceEEecCCC--HHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 9999999998642 234455 667788887766 8999999999999 999999999988765
No 30
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.68 E-value=4.7e-15 Score=118.44 Aligned_cols=136 Identities=13% Similarity=0.152 Sum_probs=100.5
Q ss_pred CCeeEEEEcCccc--------HHHHHHHhhcCCCeEEecccccHHHHHhh--CceEEecCChHHHHHHHHhCCcEEEecC
Q 031484 13 HNLFIIWQTGVEA--------FNEMESLVRNHPRLLLTPFLHSMDLAYAA--ADLIVSRAGAMTCYEILATGKPSILIPS 82 (159)
Q Consensus 13 ~~~~~~~~~G~~~--------~~~l~~~~~~~~~v~~~~~~~~~~~~l~~--ad~~i~~~G~~t~~Eal~~g~P~I~~p~ 82 (159)
.+.+|+|++|+.. .+.+.+.+ .+|+.+.+|.|++ .+|++ ++++|||+|.+|++|++++|+|+|++|.
T Consensus 323 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~--~~~~~v~~~~pq~-~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~ 399 (482)
T 2pq6_A 323 CKKSFLWIIRPDLVIGGSVIFSSEFTNEI--ADRGLIASWCPQD-KVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPF 399 (482)
T ss_dssp TTCEEEEECCGGGSTTTGGGSCHHHHHHH--TTTEEEESCCCHH-HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred cCCcEEEEEcCCccccccccCcHhHHHhc--CCCEEEEeecCHH-HHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCc
Confidence 5689999988641 13333322 4689999999986 68866 4559999999999999999999999998
Q ss_pred CCCCCchHHHHHHHHH-HcCceeeeccCCCChhHHHHHHHHHhcCHH---HHHHHHHH---HHhcC-CCChHHHHHHHHH
Q 031484 83 PNVAEGHQFKNASLMA-KLADSRIITEDELDSITLETTIEEILGNEA---LMAEMSER---ALKAA-KPGASADIAQHIL 154 (159)
Q Consensus 83 ~~~~~~~q~~~~~~~~-~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~---~~~~~~~~---~~~~~-~~~~~~~~~~~i~ 154 (159)
. .+|..|+.+++ +.|.|+.+. .+++.+.+.+++.+++.|+. +++.+++- ++... .+.+..+..+.+.
T Consensus 400 ~----~dQ~~na~~~~~~~G~g~~l~-~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v 474 (482)
T 2pq6_A 400 F----ADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVI 474 (482)
T ss_dssp S----TTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred c----cchHHHHHHHHHHhCEEEEEC-CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 5 68999999887 689999987 67889999999999999984 44333222 23322 3344445555555
Q ss_pred Hh
Q 031484 155 SL 156 (159)
Q Consensus 155 ~~ 156 (159)
+.
T Consensus 475 ~~ 476 (482)
T 2pq6_A 475 KD 476 (482)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 31
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.67 E-value=2.3e-16 Score=122.08 Aligned_cols=146 Identities=16% Similarity=0.206 Sum_probs=113.9
Q ss_pred hhhHHHHHhhcCCeeEEEEcCcccHHHHHHHhhc---CCCeEEecccccHHHHHhhCceEEecC----ChHHHHHHHHhC
Q 031484 2 LNLYYQMLMEKHNLFIIWQTGVEAFNEMESLVRN---HPRLLLTPFLHSMDLAYAAADLIVSRA----GAMTCYEILATG 74 (159)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~---~~~v~~~~~~~~~~~~l~~ad~~i~~~----G~~t~~Eal~~g 74 (159)
++++..+.+. +++++++++.+...+++++.++. .++|.+.|+.+++.++|+.||+++..+ .+.+++|||++|
T Consensus 230 i~a~~~l~~~-~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G 308 (394)
T 2jjm_A 230 VQAFAKIVTE-VDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACG 308 (394)
T ss_dssp HHHHHHHHHS-SCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTT
T ss_pred HHHHHHHHhh-CCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccccCCCchHHHHHHhcC
Confidence 5666666655 67888766544456667666543 258999999889999999999999543 368899999999
Q ss_pred CcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcC-CCChHHHHHHHH
Q 031484 75 KPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAA-KPGASADIAQHI 153 (159)
Q Consensus 75 ~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i 153 (159)
+|+|+.+.++. .+.+.+...|+.++.++ ++++++++.++++|++.+++|++++++.. ...+++++++.+
T Consensus 309 ~PvI~~~~~~~--------~e~v~~~~~g~~~~~~d--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 378 (394)
T 2jjm_A 309 VPCIGTRVGGI--------PEVIQHGDTGYLCEVGD--TTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQY 378 (394)
T ss_dssp CCEEEECCTTS--------TTTCCBTTTEEEECTTC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CCEEEecCCCh--------HHHhhcCCceEEeCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999976531 22344456888888766 89999999999999999999999998877 667888888888
Q ss_pred HHhhh
Q 031484 154 LSLVE 158 (159)
Q Consensus 154 ~~~~~ 158 (159)
.+++.
T Consensus 379 ~~~~~ 383 (394)
T 2jjm_A 379 ETIYY 383 (394)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 32
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.67 E-value=3.1e-16 Score=119.97 Aligned_cols=144 Identities=17% Similarity=0.173 Sum_probs=105.1
Q ss_pred hhhHHHHHhh-cCCeeEEEEcCcccHHHHHHHhhc---CCCeEEecccccHHHHHhhCceEEecC----ChHHHHHHHHh
Q 031484 2 LNLYYQMLME-KHNLFIIWQTGVEAFNEMESLVRN---HPRLLLTPFLHSMDLAYAAADLIVSRA----GAMTCYEILAT 73 (159)
Q Consensus 2 ~~~~~~~~~~-~~~~~~~~~~G~~~~~~l~~~~~~---~~~v~~~~~~~~~~~~l~~ad~~i~~~----G~~t~~Eal~~ 73 (159)
++++..+... .++++++++++ +..++++++++. .++|+++|+.+++.++|+.||+++..+ .+.+++|||++
T Consensus 215 i~a~~~l~~~~~~~~~l~i~G~-g~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~ 293 (374)
T 2iw1_A 215 IEALASLPESLRHNTLLFVVGQ-DKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITA 293 (374)
T ss_dssp HHHHHTSCHHHHHTEEEEEESS-SCCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH
T ss_pred HHHHHHhHhccCCceEEEEEcC-CCHHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEEeccccCCcccHHHHHHHC
Confidence 3444444444 46888876654 334555554432 358999999889999999999999754 47889999999
Q ss_pred CCcEEEecCCCCCCchHHHHHHHHHHcCceeeec-cCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC----hHHH
Q 031484 74 GKPSILIPSPNVAEGHQFKNASLMAKLADSRIIT-EDELDSITLETTIEEILGNEALMAEMSERALKAAKPG----ASAD 148 (159)
Q Consensus 74 g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~-~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~----~~~~ 148 (159)
|+|+|+++.++ ..+.+.+.+.|+.++ .++ ++++++++.++++|++.++++++++++..... ..++
T Consensus 294 G~Pvi~~~~~~--------~~e~i~~~~~g~~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (374)
T 2iw1_A 294 GLPVLTTAVCG--------YAHYIADANCGTVIAEPFS--QEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEK 363 (374)
T ss_dssp TCCEEEETTST--------TTHHHHHHTCEEEECSSCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHH
T ss_pred CCCEEEecCCC--------chhhhccCCceEEeCCCCC--HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999997642 234567778899887 555 89999999999999999999999887665433 4444
Q ss_pred HHHHHHHh
Q 031484 149 IAQHILSL 156 (159)
Q Consensus 149 ~~~~i~~~ 156 (159)
+.+.+...
T Consensus 364 ~~~~l~~~ 371 (374)
T 2iw1_A 364 AADIITGG 371 (374)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHHh
Confidence 44444433
No 33
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=99.66 E-value=4e-15 Score=118.06 Aligned_cols=136 Identities=16% Similarity=0.196 Sum_probs=102.4
Q ss_pred CCeeEEEEcCcccHHHH----HHHhhcCCCeEEecccccHHHHHhhCc--eEEecCChHHHHHHHHhCCcEEEecCCCCC
Q 031484 13 HNLFIIWQTGVEAFNEM----ESLVRNHPRLLLTPFLHSMDLAYAAAD--LIVSRAGAMTCYEILATGKPSILIPSPNVA 86 (159)
Q Consensus 13 ~~~~~~~~~G~~~~~~l----~~~~~~~~~v~~~~~~~~~~~~l~~ad--~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~ 86 (159)
.+.+|+|++|+...+.+ .+. ..+|+.+.+|.|+ ..++++++ ++|||+|.+|++|++++|+|+|++|..
T Consensus 301 ~~~~flw~~~~~~~~~lp~~~~~~--~~~~~~vv~w~Pq-~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~--- 374 (454)
T 3hbf_A 301 CGFPFIWSFRGDPKEKLPKGFLER--TKTKGKIVAWAPQ-VEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFF--- 374 (454)
T ss_dssp HCCCEEEECCSCHHHHSCTTHHHH--TTTTEEEESSCCH-HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS---
T ss_pred CCCeEEEEeCCcchhcCCHhHHhh--cCCceEEEeeCCH-HHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCccc---
Confidence 46789999987543222 111 1358899999997 59999999 899999999999999999999999985
Q ss_pred CchHHHHHHHHHHc-CceeeeccCCCChhHHHHHHHHHhcCH---HHHH---HHHHHHHhcC-CCChHHHHHHHHHH
Q 031484 87 EGHQFKNASLMAKL-ADSRIITEDELDSITLETTIEEILGNE---ALMA---EMSERALKAA-KPGASADIAQHILS 155 (159)
Q Consensus 87 ~~~q~~~~~~~~~~-~~g~~~~~~~~~~~~l~~~l~~ll~~~---~~~~---~~~~~~~~~~-~~~~~~~~~~~i~~ 155 (159)
.+|..|+..+++. |.|+.+..+.++.+.+.+++.+++.++ .+++ ++++.+++.. .+++..+-.+.+.+
T Consensus 375 -~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~ 450 (454)
T 3hbf_A 375 -GDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQ 450 (454)
T ss_dssp -TTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHH
T ss_pred -ccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHH
Confidence 6799999999985 999999887888999999999999886 3443 3333344443 34444444444433
No 34
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.64 E-value=2.1e-15 Score=117.23 Aligned_cols=147 Identities=14% Similarity=0.086 Sum_probs=111.7
Q ss_pred ChhhHHHHHhhcCCeeEEEEcCcccH------HHHHHHhhc--C-CC-------eEEecccc--cHHHHHhhCceEEecC
Q 031484 1 MLNLYYQMLMEKHNLFIIWQTGVEAF------NEMESLVRN--H-PR-------LLLTPFLH--SMDLAYAAADLIVSRA 62 (159)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~G~~~~------~~l~~~~~~--~-~~-------v~~~~~~~--~~~~~l~~ad~~i~~~ 62 (159)
|++++..+.+.+++++++++++.... +.++++++. . .+ +.+.|+++ ++..+|+.||+++..+
T Consensus 202 li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS 281 (413)
T 3oy2_A 202 YVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCS 281 (413)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECC
T ss_pred HHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCC
Confidence 46788888888999999876544321 555554432 2 23 77889986 7999999999999654
Q ss_pred ----ChHHHHHHHHhCCcEEEecCCCCCCchHHHHHHHHHHcCc---------------ee--eeccCCCChhHHHHHHH
Q 031484 63 ----GAMTCYEILATGKPSILIPSPNVAEGHQFKNASLMAKLAD---------------SR--IITEDELDSITLETTIE 121 (159)
Q Consensus 63 ----G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~---------------g~--~~~~~~~~~~~l~~~l~ 121 (159)
.+.+++|||++|+|+|+++.+ ...+.+.+... |+ .+...+ ++++++++
T Consensus 282 ~~E~~~~~~lEAma~G~PvI~s~~~--------g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d--~~~la~~i- 350 (413)
T 3oy2_A 282 SGEGFGLCSAEGAVLGKPLIISAVG--------GADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIID--VDDLVEAF- 350 (413)
T ss_dssp SCCSSCHHHHHHHTTTCCEEEECCH--------HHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECC--HHHHHHHH-
T ss_pred CcCCCCcHHHHHHHcCCCEEEcCCC--------ChHHHHccCcccccccccccccccccCcceeeCCCC--HHHHHHHH-
Confidence 367899999999999998653 23344444333 66 776665 89999999
Q ss_pred HHhcCHHHHHHHHHHHHhcC-CCChHHHHHHHHHHhhh
Q 031484 122 EILGNEALMAEMSERALKAA-KPGASADIAQHILSLVE 158 (159)
Q Consensus 122 ~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 158 (159)
++++|++.+++|++++++.. ...+++++++.+.+++.
T Consensus 351 ~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~ 388 (413)
T 3oy2_A 351 TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFN 388 (413)
T ss_dssp HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999999998886 46699999888887754
No 35
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.64 E-value=2.2e-15 Score=117.22 Aligned_cols=147 Identities=14% Similarity=0.133 Sum_probs=113.5
Q ss_pred ChhhHHHHHhhc--CCeeEEEEcCcccH--HHHHHHhhcC-CCeEEecccc--cHHHHHhhCceEEecC----ChHHHHH
Q 031484 1 MLNLYYQMLMEK--HNLFIIWQTGVEAF--NEMESLVRNH-PRLLLTPFLH--SMDLAYAAADLIVSRA----GAMTCYE 69 (159)
Q Consensus 1 ~~~~~~~~~~~~--~~~~~~~~~G~~~~--~~l~~~~~~~-~~v~~~~~~~--~~~~~l~~ad~~i~~~----G~~t~~E 69 (159)
+++++..+.... +++++++++++... +.++++++.. +.+.+.|+++ ++..+|+.||+++..+ .+.+++|
T Consensus 270 li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~E 349 (439)
T 3fro_A 270 LLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALE 349 (439)
T ss_dssp HHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHH
T ss_pred HHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHH
Confidence 356777777766 89999776554433 6666665443 4556788675 6899999999999654 2688999
Q ss_pred HHHhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCChHHH
Q 031484 70 ILATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILG-NEALMAEMSERALKAAKPGASAD 148 (159)
Q Consensus 70 al~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~ 148 (159)
||++|+|+|+++.+ + ..+ +.+.+.|+.++.+| ++.+++++.++++ +++.++++++++++.....+++.
T Consensus 350 Ama~G~Pvi~s~~~----~----~~e-~~~~~~g~~~~~~d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~ 418 (439)
T 3fro_A 350 AMCLGAIPIASAVG----G----LRD-IITNETGILVKAGD--PGELANAILKALELSRSDLSKFRENCKKRAMSFSWEK 418 (439)
T ss_dssp HHHTTCEEEEESST----H----HHH-HCCTTTCEEECTTC--HHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHH
T ss_pred HHHCCCCeEEcCCC----C----cce-eEEcCceEEeCCCC--HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHH
Confidence 99999999998653 1 233 34356899888776 8999999999999 99999999999988776689999
Q ss_pred HHHHHHHhhh
Q 031484 149 IAQHILSLVE 158 (159)
Q Consensus 149 ~~~~i~~~~~ 158 (159)
+++.+.+++.
T Consensus 419 ~~~~~~~~~~ 428 (439)
T 3fro_A 419 SAERYVKAYT 428 (439)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988888764
No 36
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.63 E-value=2.5e-15 Score=112.46 Aligned_cols=88 Identities=14% Similarity=0.031 Sum_probs=75.8
Q ss_pred eEEEEcCcc--cHHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHHH
Q 031484 16 FIIWQTGVE--AFNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFKN 93 (159)
Q Consensus 16 ~~~~~~G~~--~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~~ 93 (159)
++.+++|++ .++++++.++..+++.+.+|+++|.++|+.||++||++| +|++|++++|+|+|++|.. ++|..|
T Consensus 185 ~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDlvI~~gG-~T~~E~~~~g~P~i~ip~~----~~Q~~n 259 (282)
T 3hbm_A 185 IISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNKLIISAS-SLVNEALLLKANFKAICYV----KNQEST 259 (282)
T ss_dssp CEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEEEEEESS-HHHHHHHHTTCCEEEECCS----GGGHHH
T ss_pred CEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCEEEECCc-HHHHHHHHcCCCEEEEeCC----CCHHHH
Confidence 466666764 477887766656799999999999999999999999776 7999999999999999974 789999
Q ss_pred HHHHHHcCceeeecc
Q 031484 94 ASLMAKLADSRIITE 108 (159)
Q Consensus 94 ~~~~~~~~~g~~~~~ 108 (159)
++++.+.|.++.+..
T Consensus 260 A~~l~~~G~~~~~~~ 274 (282)
T 3hbm_A 260 ATWLAKKGYEVEYKY 274 (282)
T ss_dssp HHHHHHTTCEEECGG
T ss_pred HHHHHHCCCEEEcch
Confidence 999999999988764
No 37
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.61 E-value=2.1e-14 Score=114.26 Aligned_cols=119 Identities=13% Similarity=0.163 Sum_probs=92.2
Q ss_pred CCeeEEEEcCcc--c-HHHHHHHhhcCCCeEEecccccHHHHHh--hCceEEecCChHHHHHHHHhCCcEEEecCCCCCC
Q 031484 13 HNLFIIWQTGVE--A-FNEMESLVRNHPRLLLTPFLHSMDLAYA--AADLIVSRAGAMTCYEILATGKPSILIPSPNVAE 87 (159)
Q Consensus 13 ~~~~~~~~~G~~--~-~~~l~~~~~~~~~v~~~~~~~~~~~~l~--~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~ 87 (159)
.+++|+|++|+. . .+.+.+.+...+++.+.+|.|++ .+|+ .+|++|||+|++|++|++++|+|+|++|..
T Consensus 305 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~-~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~---- 379 (463)
T 2acv_A 305 SGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQV-EVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIY---- 379 (463)
T ss_dssp HTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHH-HHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCS----
T ss_pred CCCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCHH-HHhCCCccCeEEecCCchhHHHHHHcCCCeeeccch----
Confidence 468999999974 1 13333222112478899999986 5675 799999999999999999999999999985
Q ss_pred chHHHHHHHH-HHcCceeeec----cC--CCChhHHHHHHHHHhc-CHHHHHHHHHH
Q 031484 88 GHQFKNASLM-AKLADSRIIT----ED--ELDSITLETTIEEILG-NEALMAEMSER 136 (159)
Q Consensus 88 ~~q~~~~~~~-~~~~~g~~~~----~~--~~~~~~l~~~l~~ll~-~~~~~~~~~~~ 136 (159)
.+|..|+.++ ++.|.|+.+. .+ .++.+.+.+++.++++ ++.+++.+++-
T Consensus 380 ~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l 436 (463)
T 2acv_A 380 AEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEM 436 (463)
T ss_dssp TTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHH
T ss_pred hhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 7899999995 7899999883 34 5789999999999997 45666544443
No 38
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.59 E-value=7.7e-15 Score=116.93 Aligned_cols=145 Identities=11% Similarity=0.189 Sum_probs=109.4
Q ss_pred hhhHHHHHhhcCCe-eEEEEcCc--cc--------------HHHHHHHhhc---CCCeEEeccc--ccHHHHHhhC----
Q 031484 2 LNLYYQMLMEKHNL-FIIWQTGV--EA--------------FNEMESLVRN---HPRLLLTPFL--HSMDLAYAAA---- 55 (159)
Q Consensus 2 ~~~~~~~~~~~~~~-~~~~~~G~--~~--------------~~~l~~~~~~---~~~v~~~~~~--~~~~~~l~~a---- 55 (159)
++++..+...+++. +++++ |. +. .++++++++. .++|.++|++ +++..+|+.|
T Consensus 281 i~a~~~l~~~~~~~~~l~i~-G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~ 359 (499)
T 2r60_A 281 VEAYVQNKELQDKANLVLTL-RGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKG 359 (499)
T ss_dssp HHHHHTCHHHHHHCEEEEEE-SSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCceEEEEE-CCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCC
Confidence 45565555554543 56554 44 22 5666666543 3589999998 4799999999
Q ss_pred ceEEecC---C-hHHHHHHHHhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHH
Q 031484 56 DLIVSRA---G-AMTCYEILATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMA 131 (159)
Q Consensus 56 d~~i~~~---G-~~t~~Eal~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~ 131 (159)
|+++..+ | +.+++|||++|+|+|+++.+ ...+.+.+...|+.++.+| ++.+++++.++++|++.++
T Consensus 360 dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~--------g~~e~v~~~~~g~l~~~~d--~~~la~~i~~ll~~~~~~~ 429 (499)
T 2r60_A 360 SVFALTSFYEPFGLAPVEAMASGLPAVVTRNG--------GPAEILDGGKYGVLVDPED--PEDIARGLLKAFESEETWS 429 (499)
T ss_dssp CEEEECCSCBCCCSHHHHHHHTTCCEEEESSB--------HHHHHTGGGTSSEEECTTC--HHHHHHHHHHHHSCHHHHH
T ss_pred CEEEECcccCCCCcHHHHHHHcCCCEEEecCC--------CHHHHhcCCceEEEeCCCC--HHHHHHHHHHHHhCHHHHH
Confidence 9999755 2 67899999999999998653 1345556666888888766 8999999999999999999
Q ss_pred HHHHHHHhcCCC-ChHHHHHHHHHHhh
Q 031484 132 EMSERALKAAKP-GASADIAQHILSLV 157 (159)
Q Consensus 132 ~~~~~~~~~~~~-~~~~~~~~~i~~~~ 157 (159)
++++++++.... .+++++++.+.+++
T Consensus 430 ~~~~~a~~~~~~~fs~~~~~~~~~~~y 456 (499)
T 2r60_A 430 AYQEKGKQRVEERYTWQETARGYLEVI 456 (499)
T ss_dssp HHHHHHHHHHHHHSBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999998877654 68888888777764
No 39
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.59 E-value=7.3e-14 Score=111.58 Aligned_cols=93 Identities=14% Similarity=0.173 Sum_probs=78.9
Q ss_pred eEEecccccHHHHHhhCc--eEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHHHHHHH-HHcCceeeeccC---CCC
Q 031484 39 LLLTPFLHSMDLAYAAAD--LIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFKNASLM-AKLADSRIITED---ELD 112 (159)
Q Consensus 39 v~~~~~~~~~~~~l~~ad--~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~~~~~~-~~~~~g~~~~~~---~~~ 112 (159)
+.+.+|.|+. .++++++ ++|||+|.+|++|++++|+|+|++|.. .+|..|+..+ ++.|.|+.+... .++
T Consensus 341 ~~v~~w~Pq~-~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~----~DQ~~na~~l~~~~G~g~~l~~~~~~~~~ 415 (480)
T 2vch_A 341 FVIPFWAPQA-QVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLY----AEQKMNAVLLSEDIRAALRPRAGDDGLVR 415 (480)
T ss_dssp EEEESCCCHH-HHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS----TTHHHHHHHHHHTTCCEECCCCCTTSCCC
T ss_pred EEEeCccCHH-HHhCCCCcCeEEecccchhHHHHHHcCCCEEecccc----ccchHHHHHHHHHhCeEEEeecccCCccC
Confidence 4566699975 9999888 799999999999999999999999985 7899999997 688999988654 678
Q ss_pred hhHHHHHHHHHhc---CHHHHHHHHHH
Q 031484 113 SITLETTIEEILG---NEALMAEMSER 136 (159)
Q Consensus 113 ~~~l~~~l~~ll~---~~~~~~~~~~~ 136 (159)
.+.+.+++.+++. ++.+++.+++-
T Consensus 416 ~~~l~~av~~vl~~~~~~~~r~~a~~l 442 (480)
T 2vch_A 416 REEVARVVKGLMEGEEGKGVRNKMKEL 442 (480)
T ss_dssp HHHHHHHHHHHHTSTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHH
Confidence 9999999999998 66666544443
No 40
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.58 E-value=2.4e-14 Score=99.72 Aligned_cols=124 Identities=11% Similarity=0.088 Sum_probs=90.2
Q ss_pred HHHHHhhcCCeeEEEEcCcccHHHHHHHhh-----cCCCeEEeccccc--HHHHHhhCceEEecC----ChHHHHHHHHh
Q 031484 5 YYQMLMEKHNLFIIWQTGVEAFNEMESLVR-----NHPRLLLTPFLHS--MDLAYAAADLIVSRA----GAMTCYEILAT 73 (159)
Q Consensus 5 ~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~-----~~~~v~~~~~~~~--~~~~l~~ad~~i~~~----G~~t~~Eal~~ 73 (159)
+.+.++..++++++++++....+.+++.++ -.++|.+.|++++ +..+|+.||++|..+ .+.+++|+|++
T Consensus 41 li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~ 120 (177)
T 2f9f_A 41 QLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS 120 (177)
T ss_dssp HHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT
T ss_pred HHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHc
Confidence 334444557899987765543334444332 2459999999975 999999999999733 36789999999
Q ss_pred CCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHH-HHHHHHHHHh
Q 031484 74 GKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEAL-MAEMSERALK 139 (159)
Q Consensus 74 g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~-~~~~~~~~~~ 139 (159)
|+|+|+.+.+ ...+.+.+...|+++ ..+ ++.+++++.++++|+.. ++++++++++
T Consensus 121 G~PvI~~~~~--------~~~e~i~~~~~g~~~-~~d--~~~l~~~i~~l~~~~~~~~~~~~~~a~~ 176 (177)
T 2f9f_A 121 GKPVIAVNEG--------GFKETVINEKTGYLV-NAD--VNEIIDAMKKVSKNPDKFKKDCFRRAKE 176 (177)
T ss_dssp TCCEEEESSH--------HHHHHCCBTTTEEEE-CSC--HHHHHHHHHHHHHCTTTTHHHHHHHHHT
T ss_pred CCcEEEeCCC--------CHHHHhcCCCccEEe-CCC--HHHHHHHHHHHHhCHHHHHHHHHHHHhc
Confidence 9999998642 234455556678888 555 89999999999988876 6777776654
No 41
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.58 E-value=2.2e-15 Score=103.44 Aligned_cols=137 Identities=14% Similarity=0.151 Sum_probs=93.0
Q ss_pred hhhHHHHHhhcCCeeEEEEcCcccHHHHHHHhhcC-CCeEEecccc--cHHHHHhhCceEEecC----ChHHHHHHHHhC
Q 031484 2 LNLYYQMLMEKHNLFIIWQTGVEAFNEMESLVRNH-PRLLLTPFLH--SMDLAYAAADLIVSRA----GAMTCYEILATG 74 (159)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~-~~v~~~~~~~--~~~~~l~~ad~~i~~~----G~~t~~Eal~~g 74 (159)
++++..+ +.+++++++++++....+.+++.++.. .++.+ ++++ ++.++|+.||+++..+ .+.+++|||++|
T Consensus 21 i~a~~~l-~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G 98 (166)
T 3qhp_A 21 IKAVALS-KYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVG 98 (166)
T ss_dssp HHHHHTC-TTGGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTT
T ss_pred HHHHHHh-ccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcC
Confidence 4455543 445899997765545566666665432 27888 9985 7999999999999754 268899999999
Q ss_pred C-cEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHH
Q 031484 75 K-PSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQ 151 (159)
Q Consensus 75 ~-P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (159)
+ |+|+.+..+ +. .+.+.+.+. .+..++ ++.+++++.++++|+..++++++++++.....+++++++
T Consensus 99 ~vPvi~~~~~~---~~----~~~~~~~~~--~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 99 IVPVIANSPLS---AT----RQFALDERS--LFEPNN--AKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp CCEEEECCTTC---GG----GGGCSSGGG--EECTTC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC------
T ss_pred CCcEEeeCCCC---ch----hhhccCCce--EEcCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHCChhhhhc
Confidence 7 999953321 11 112222222 555555 899999999999999999999999887765556666554
No 42
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.57 E-value=4.7e-14 Score=113.97 Aligned_cols=151 Identities=19% Similarity=0.190 Sum_probs=112.1
Q ss_pred ChhhHHHHHhhcCCeeEEEEcCc-ccHHHHHHHhhc---C-CCeEEecccc--cHHHHHhhCceEEecC---ChHHHHHH
Q 031484 1 MLNLYYQMLMEKHNLFIIWQTGV-EAFNEMESLVRN---H-PRLLLTPFLH--SMDLAYAAADLIVSRA---GAMTCYEI 70 (159)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~G~-~~~~~l~~~~~~---~-~~v~~~~~~~--~~~~~l~~ad~~i~~~---G~~t~~Ea 70 (159)
+++++..+++..|+++++++++. ...+.+++.++. . ++|+|+|+++ ++..+|+.||+++..+ ++.+++||
T Consensus 393 li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~~g~~~lEA 472 (568)
T 2vsy_A 393 SMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDA 472 (568)
T ss_dssp HHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSSCCSHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCCCCcHHHHHH
Confidence 46788888888999999877623 345666665532 3 5899999996 7999999999999544 47889999
Q ss_pred HHhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcC---CCChHH
Q 031484 71 LATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAA---KPGASA 147 (159)
Q Consensus 71 l~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~---~~~~~~ 147 (159)
|++|+|+|+.+..... . ...+..+...|..-++.. +++.+++.+.++++|++.+++|++++++.. ...+++
T Consensus 473 ma~G~Pvv~~~g~~~~--s-~~~~~~l~~~g~~e~v~~---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~ 546 (568)
T 2vsy_A 473 LWTGCPVLTTPGETFA--A-RVAGSLNHHLGLDEMNVA---DDAAFVAKAVALASDPAALTALHARVDVLRRASGVFHMD 546 (568)
T ss_dssp HHTTCCEEBCCCSSGG--G-SHHHHHHHHHTCGGGBCS---SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHH
T ss_pred HhCCCCEEeccCCCch--H-HHHHHHHHHCCChhhhcC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHH
Confidence 9999999995432110 1 112334455565444433 389999999999999999999999988775 667888
Q ss_pred HHHHHHHHhh
Q 031484 148 DIAQHILSLV 157 (159)
Q Consensus 148 ~~~~~i~~~~ 157 (159)
.+++.+.++.
T Consensus 547 ~~~~~~~~~y 556 (568)
T 2vsy_A 547 GFADDFGALL 556 (568)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887764
No 43
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.57 E-value=3.9e-15 Score=115.42 Aligned_cols=133 Identities=14% Similarity=0.133 Sum_probs=96.4
Q ss_pred ChhhHHHHHhhcCCeeEEEEcCcccH-HHHHHHhhcC-----------CCeEEecccccHHHHHhhCceEEec-----CC
Q 031484 1 MLNLYYQMLMEKHNLFIIWQTGVEAF-NEMESLVRNH-----------PRLLLTPFLHSMDLAYAAADLIVSR-----AG 63 (159)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~G~~~~-~~l~~~~~~~-----------~~v~~~~~~~~~~~~l~~ad~~i~~-----~G 63 (159)
|++++..+.+.+|+++++++++.+.. ++++++++.. .++.+.++.+++..+|+.||+++.. .|
T Consensus 212 ll~A~~~l~~~~p~~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~g 291 (374)
T 2xci_A 212 ILKAFKEIKKTYSSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTFVNIG 291 (374)
T ss_dssp HHHHHHHHHTTCTTCEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSSSSSC
T ss_pred HHHHHHHHHhhCCCcEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcccCCC
Confidence 46788888888899999877544433 5676654321 3577888888999999999996542 24
Q ss_pred hHHHHHHHHhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 031484 64 AMTCYEILATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAK 142 (159)
Q Consensus 64 ~~t~~Eal~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~ 142 (159)
+.+++|||++|+|+|+.|..+ +. .+..+.+.+.|.++. .+| ++.|++++.++++| +.+++|++++++...
T Consensus 292 g~~~lEAmA~G~PVI~~~~~~---~~-~e~~~~~~~~G~l~~--~~d--~~~La~ai~~ll~d-~~r~~mg~~ar~~~~ 361 (374)
T 2xci_A 292 GHNLLEPTCWGIPVIYGPYTH---KV-NDLKEFLEKEGAGFE--VKN--ETELVTKLTELLSV-KKEIKVEEKSREIKG 361 (374)
T ss_dssp CCCCHHHHTTTCCEEECSCCT---TS-HHHHHHHHHTTCEEE--CCS--HHHHHHHHHHHHHS-CCCCCHHHHHHHHHH
T ss_pred CcCHHHHHHhCCCEEECCCcc---Ch-HHHHHHHHHCCCEEE--eCC--HHHHHHHHHHHHhH-HHHHHHHHHHHHHHH
Confidence 688999999999999876531 22 222333344555543 444 89999999999999 989999999887753
No 44
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.55 E-value=6.5e-15 Score=114.72 Aligned_cols=144 Identities=16% Similarity=0.106 Sum_probs=107.8
Q ss_pred hhhHHHHHhhcCCeeEEEEcCcccHHHHHHH---hhcCCCeEEecccc--cHHHHHhhCceEEecCChHHHHHHHHhCCc
Q 031484 2 LNLYYQMLMEKHNLFIIWQTGVEAFNEMESL---VRNHPRLLLTPFLH--SMDLAYAAADLIVSRAGAMTCYEILATGKP 76 (159)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~G~~~~~~l~~~---~~~~~~v~~~~~~~--~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P 76 (159)
++++.++.+.+ ++++++.+++...+.+++. ....+++.+.+..+ ++..+|+.||++++.||+. ..|++++|+|
T Consensus 226 l~al~~l~~~~-~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~SGgv-~~EA~alG~P 303 (385)
T 4hwg_A 226 LNSLQMLIKEY-NFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDSGTI-TEEASILNLP 303 (385)
T ss_dssp HHHHHHHHHHH-CCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECCTTH-HHHHHHTTCC
T ss_pred HHHHHHHHhcC-CeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECCccH-HHHHHHcCCC
Confidence 34555555555 7888888776544455543 32246888876554 6889999999999999975 4899999999
Q ss_pred EEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhc-CCCChHHHHHHHHHH
Q 031484 77 SILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKA-AKPGASADIAQHILS 155 (159)
Q Consensus 77 ~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~ 155 (159)
+|+++... ..+. ..+.|.++.++. + ++.+.+++.++++|+..++.|+.+...+ +++++++++++.|.+
T Consensus 304 vv~~~~~t---er~e-----~v~~G~~~lv~~-d--~~~i~~ai~~ll~d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~ 372 (385)
T 4hwg_A 304 ALNIREAH---ERPE-----GMDAGTLIMSGF-K--AERVLQAVKTITEEHDNNKRTQGLVPDYNEAGLVSKKILRIVLS 372 (385)
T ss_dssp EEECSSSC---SCTH-----HHHHTCCEECCS-S--HHHHHHHHHHHHTTCBTTBCCSCCCHHHHTCCCHHHHHHHHHHH
T ss_pred EEEcCCCc---cchh-----hhhcCceEEcCC-C--HHHHHHHHHHHHhChHHHHHhhccCCCCCCCChHHHHHHHHHHH
Confidence 99986531 1122 245677777654 3 8999999999999998887787777788 999999999999988
Q ss_pred hhh
Q 031484 156 LVE 158 (159)
Q Consensus 156 ~~~ 158 (159)
+++
T Consensus 373 ~~~ 375 (385)
T 4hwg_A 373 YVD 375 (385)
T ss_dssp HHH
T ss_pred Hhh
Confidence 653
No 45
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.55 E-value=1.6e-13 Score=108.86 Aligned_cols=142 Identities=13% Similarity=0.047 Sum_probs=107.5
Q ss_pred hhhHHHHHhhcCCeeEEEEcCcc--cHHHHHHHhhcC-CCeE-Eeccccc-HHHHHhhCceEEecC----ChHHHHHHHH
Q 031484 2 LNLYYQMLMEKHNLFIIWQTGVE--AFNEMESLVRNH-PRLL-LTPFLHS-MDLAYAAADLIVSRA----GAMTCYEILA 72 (159)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~G~~--~~~~l~~~~~~~-~~v~-~~~~~~~-~~~~l~~ad~~i~~~----G~~t~~Eal~ 72 (159)
++++..+.+ +++++++++++. ..+.+++++... .++. +.|+.++ +..+|+.||+++..+ .+.+++|||+
T Consensus 310 i~a~~~l~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma 387 (485)
T 1rzu_A 310 AEAVDEIVS--LGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALR 387 (485)
T ss_dssp HTTHHHHHH--TTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHH
T ss_pred HHHHHHHHh--cCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCEEEECcccCCCCHHHHHHHH
Confidence 566666654 488887765543 245666655433 5787 7899654 479999999999755 2688999999
Q ss_pred hCCcEEEecCCCCCCchHHHHHHHHHHc---------CceeeeccCCCChhHHHHHHHHHh---cCHHHHHHHHHHHHhc
Q 031484 73 TGKPSILIPSPNVAEGHQFKNASLMAKL---------ADSRIITEDELDSITLETTIEEIL---GNEALMAEMSERALKA 140 (159)
Q Consensus 73 ~g~P~I~~p~~~~~~~~q~~~~~~~~~~---------~~g~~~~~~~~~~~~l~~~l~~ll---~~~~~~~~~~~~~~~~ 140 (159)
+|+|+|+++.+ ...+.+.+. +.|+.++.++ ++.+++++.+++ +|++.+++|+++++.
T Consensus 388 ~G~PvI~s~~g--------g~~e~v~~~~~~~~~~~~~~G~l~~~~d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~~- 456 (485)
T 1rzu_A 388 YGCIPVVARTG--------GLADTVIDANHAALASKAATGVQFSPVT--LDGLKQAIRRTVRYYHDPKLWTQMQKLGMK- 456 (485)
T ss_dssp HTCEEEEESSH--------HHHHHCCBCCHHHHHTTCCCBEEESSCS--HHHHHHHHHHHHHHHTCHHHHHHHHHHHHT-
T ss_pred CCCCEEEeCCC--------ChhheecccccccccccCCcceEeCCCC--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-
Confidence 99999998642 234444444 6898888766 899999999999 899999999998865
Q ss_pred CCCChHHHHHHHHHHhh
Q 031484 141 AKPGASADIAQHILSLV 157 (159)
Q Consensus 141 ~~~~~~~~~~~~i~~~~ 157 (159)
...+++.+++.+.++.
T Consensus 457 -~~fs~~~~~~~~~~~y 472 (485)
T 1rzu_A 457 -SDVSWEKSAGLYAALY 472 (485)
T ss_dssp -CCCBHHHHHHHHHHHH
T ss_pred -HhCChHHHHHHHHHHH
Confidence 6678999988888764
No 46
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.54 E-value=1.8e-13 Score=108.56 Aligned_cols=142 Identities=11% Similarity=0.040 Sum_probs=106.7
Q ss_pred hhhHHHHHhhcCCeeEEEEcCcc--cHHHHHHHhhcC-CCeE-Eeccccc-HHHHHhhCceEEecC----ChHHHHHHHH
Q 031484 2 LNLYYQMLMEKHNLFIIWQTGVE--AFNEMESLVRNH-PRLL-LTPFLHS-MDLAYAAADLIVSRA----GAMTCYEILA 72 (159)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~G~~--~~~~l~~~~~~~-~~v~-~~~~~~~-~~~~l~~ad~~i~~~----G~~t~~Eal~ 72 (159)
++++..+.+ ++++++++++.. ..+.+++++... .++. +.|+.++ +..+|+.||+++..+ .+.+++|||+
T Consensus 311 i~a~~~l~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma 388 (485)
T 2qzs_A 311 LEALPGLLE--QGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLK 388 (485)
T ss_dssp HHHHHHHHH--TTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHH
T ss_pred HHHHHHHhh--CCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCEEEECCccCCCcHHHHHHHH
Confidence 556666654 488887664443 345666655433 5786 8898654 589999999999755 2678999999
Q ss_pred hCCcEEEecCCCCCCchHHHHHHHHHHc---------CceeeeccCCCChhHHHHHHHHHh---cCHHHHHHHHHHHHhc
Q 031484 73 TGKPSILIPSPNVAEGHQFKNASLMAKL---------ADSRIITEDELDSITLETTIEEIL---GNEALMAEMSERALKA 140 (159)
Q Consensus 73 ~g~P~I~~p~~~~~~~~q~~~~~~~~~~---------~~g~~~~~~~~~~~~l~~~l~~ll---~~~~~~~~~~~~~~~~ 140 (159)
+|+|+|+++.+ ...+.+.+. ..|+.++.++ ++.+++++.+++ .|++.+++|+++++.
T Consensus 389 ~G~PvI~s~~g--------g~~e~v~~~~~~~~~~~~~~G~l~~~~d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~~- 457 (485)
T 2qzs_A 389 YGTLPLVRRTG--------GLADTVSDCSLENLADGVASGFVFEDSN--AWSLLRAIRRAFVLWSRPSLWRFVQRQAMA- 457 (485)
T ss_dssp HTCEEEEESSH--------HHHHHCCBCCHHHHHTTCCCBEEECSSS--HHHHHHHHHHHHHHHTSHHHHHHHHHHHHH-
T ss_pred CCCCEEECCCC--------CccceeccCccccccccccceEEECCCC--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-
Confidence 99999998642 234444444 6899988776 899999999999 799999999988865
Q ss_pred CCCChHHHHHHHHHHhh
Q 031484 141 AKPGASADIAQHILSLV 157 (159)
Q Consensus 141 ~~~~~~~~~~~~i~~~~ 157 (159)
...+++.+++.+.++.
T Consensus 458 -~~fs~~~~~~~~~~ly 473 (485)
T 2qzs_A 458 -MDFSWQVAAKSYRELY 473 (485)
T ss_dssp -CCCCHHHHHHHHHHHH
T ss_pred -hcCCHHHHHHHHHHHH
Confidence 5678999988888764
No 47
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.52 E-value=7.2e-14 Score=117.52 Aligned_cols=147 Identities=13% Similarity=0.114 Sum_probs=112.8
Q ss_pred ChhhHHHHHhhcCCeeEEEEcCcc-----------cHHHHHHHhhc---CCCeEEecccc------cHHHHHh-hCceEE
Q 031484 1 MLNLYYQMLMEKHNLFIIWQTGVE-----------AFNEMESLVRN---HPRLLLTPFLH------SMDLAYA-AADLIV 59 (159)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~G~~-----------~~~~l~~~~~~---~~~v~~~~~~~------~~~~~l~-~ad~~i 59 (159)
|++++..+...+++++++++++.. ..++++++++. .++|.++|+.+ ++..+|+ .+|+++
T Consensus 590 LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV 669 (816)
T 3s28_A 590 LVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFV 669 (816)
T ss_dssp HHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEE
Confidence 356777777777889998877665 34555555433 35899999653 4777787 679999
Q ss_pred ecC----ChHHHHHHHHhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHh----cCHHHHH
Q 031484 60 SRA----GAMTCYEILATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEIL----GNEALMA 131 (159)
Q Consensus 60 ~~~----G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll----~~~~~~~ 131 (159)
..+ .+.+++|||++|+|+|+++.++ ..+.+.+...|+.++.+| ++.+++++.+++ .|++.++
T Consensus 670 ~PS~~EgfglvllEAMA~G~PVIasd~GG--------~~EiV~dg~~Gllv~p~D--~e~LA~aI~~lL~~Ll~d~~~~~ 739 (816)
T 3s28_A 670 QPALYEAFGLTVVEAMTCGLPTFATCKGG--------PAEIIVHGKSGFHIDPYH--GDQAADTLADFFTKCKEDPSHWD 739 (816)
T ss_dssp ECCSCBSSCHHHHHHHHTTCCEEEESSBT--------HHHHCCBTTTBEEECTTS--HHHHHHHHHHHHHHHHHCTHHHH
T ss_pred ECCCccCccHHHHHHHHcCCCEEEeCCCC--------hHHHHccCCcEEEeCCCC--HHHHHHHHHHHHHHhccCHHHHH
Confidence 755 3688999999999999986541 344455667899998876 899999997766 8999999
Q ss_pred HHHHHHHhcC-CCChHHHHHHHHHHhh
Q 031484 132 EMSERALKAA-KPGASADIAQHILSLV 157 (159)
Q Consensus 132 ~~~~~~~~~~-~~~~~~~~~~~i~~~~ 157 (159)
+|++++++.. ...+++.+++.+.++.
T Consensus 740 ~m~~~ar~~a~~~fSwe~~a~~ll~lY 766 (816)
T 3s28_A 740 EISKGGLQRIEEKYTWQIYSQRLLTLT 766 (816)
T ss_dssp HHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999998887 6779999998888764
No 48
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.39 E-value=4.5e-12 Score=96.11 Aligned_cols=126 Identities=11% Similarity=0.020 Sum_probs=87.0
Q ss_pred CeeEEEEcCcccHHHHHHHhhc-CCCeEEecccc--cHHHHHhhCceEEecC--------------ChHHHHHHHHhCCc
Q 031484 14 NLFIIWQTGVEAFNEMESLVRN-HPRLLLTPFLH--SMDLAYAAADLIVSRA--------------GAMTCYEILATGKP 76 (159)
Q Consensus 14 ~~~~~~~~G~~~~~~l~~~~~~-~~~v~~~~~~~--~~~~~l~~ad~~i~~~--------------G~~t~~Eal~~g~P 76 (159)
+++++++++....+.++++.+. .++|+++|+++ ++.++|+.||+++..+ .+.+++|||++|+|
T Consensus 188 ~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~P 267 (342)
T 2iuy_A 188 GRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTP 267 (342)
T ss_dssp TCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCC
T ss_pred CcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCC
Confidence 7888766544455555554432 27999999997 5699999999998432 26889999999999
Q ss_pred EEEecCCCCCCchHHHHHHHHHH--cCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 031484 77 SILIPSPNVAEGHQFKNASLMAK--LADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIAQHIL 154 (159)
Q Consensus 77 ~I~~p~~~~~~~~q~~~~~~~~~--~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 154 (159)
+|+++.+ + ..+.+.+ ...|+.++. + ++.+++++.++++ .+..++... ...+++++++.+.
T Consensus 268 vI~s~~~----~----~~e~~~~~~~~~g~~~~~-d--~~~l~~~i~~l~~----~~~~~~~~~---~~~s~~~~~~~~~ 329 (342)
T 2iuy_A 268 VVGTGNG----C----LAEIVPSVGEVVGYGTDF-A--PDEARRTLAGLPA----SDEVRRAAV---RLWGHVTIAERYV 329 (342)
T ss_dssp EEECCTT----T----HHHHGGGGEEECCSSSCC-C--HHHHHHHHHTSCC----HHHHHHHHH---HHHBHHHHHHHHH
T ss_pred EEEcCCC----C----hHHHhcccCCCceEEcCC-C--HHHHHHHHHHHHH----HHHHHHHHH---HhcCHHHHHHHHH
Confidence 9998764 1 3455666 567887776 5 8999999999988 222333221 2235566665555
Q ss_pred Hhh
Q 031484 155 SLV 157 (159)
Q Consensus 155 ~~~ 157 (159)
+++
T Consensus 330 ~~~ 332 (342)
T 2iuy_A 330 EQY 332 (342)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 49
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.38 E-value=9.8e-14 Score=108.89 Aligned_cols=132 Identities=8% Similarity=-0.099 Sum_probs=88.8
Q ss_pred ChhhHHHHHhhcCC---eeEEEEcCcccHHHHHHHhhcCCCeEEecccc--cHHHHHhhCceEEecC---C-hHHHHHHH
Q 031484 1 MLNLYYQMLMEKHN---LFIIWQTGVEAFNEMESLVRNHPRLLLTPFLH--SMDLAYAAADLIVSRA---G-AMTCYEIL 71 (159)
Q Consensus 1 ~~~~~~~~~~~~~~---~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~--~~~~~l~~ad~~i~~~---G-~~t~~Eal 71 (159)
|++++..+.+.+|+ ++++++++.....+ +....+|+++|+++ ++.++|+.||+++..| | +.+++|||
T Consensus 260 li~A~~~l~~~~~~~~~~~l~ivG~~~~~~~----l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAm 335 (413)
T 2x0d_A 260 IVEALKIFVQKYDRSNEWKIISVGEKHKDIA----LGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMA 335 (413)
T ss_dssp HHHHHHHHHHHCTTGGGCEEEEEESCCCCEE----EETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHH
T ss_pred HHHHHHHHHHhCCCCCceEEEEEcCCchhhh----cCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHH
Confidence 35677777777775 88876654332211 22235799999984 7999999999999654 2 57789999
Q ss_pred HhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHH
Q 031484 72 ATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIA 150 (159)
Q Consensus 72 ~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (159)
+||+|+|+. ..+ . .+.+.+...|+.++.+| ++++++++.++++|++.+++ ++++.....+|++++
T Consensus 336 A~G~PVV~~-~~g---~-----~e~v~~~~~G~lv~~~d--~~~la~ai~~ll~~~~~~~~---~~~~~~~~~~W~~~~ 400 (413)
T 2x0d_A 336 HFGLRVITN-KYE---N-----KDLSNWHSNIVSLEQLN--PENIAETLVELCMSFNNRDV---DKKESSNMMFYINEF 400 (413)
T ss_dssp HTTCEEEEE-CBT---T-----BCGGGTBTTEEEESSCS--HHHHHHHHHHHHHHTC----------CCBSCGGGCCCC
T ss_pred hCCCcEEEe-CCC---c-----chhhhcCCCEEEeCCCC--HHHHHHHHHHHHcCHHHHHH---hHHHHHHhCCHHHHH
Confidence 999999984 321 1 12345556798888777 89999999999998887766 344444455665553
No 50
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.26 E-value=4.1e-11 Score=96.95 Aligned_cols=143 Identities=11% Similarity=0.106 Sum_probs=92.1
Q ss_pred ChhhHHHHHhhcCCeeEEEEcCc-cc-HHHHHHHhhc-CCCeEEecccc--cHHHHHhhCceEEecC----ChHHHHHHH
Q 031484 1 MLNLYYQMLMEKHNLFIIWQTGV-EA-FNEMESLVRN-HPRLLLTPFLH--SMDLAYAAADLIVSRA----GAMTCYEIL 71 (159)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~G~-~~-~~~l~~~~~~-~~~v~~~~~~~--~~~~~l~~ad~~i~~~----G~~t~~Eal 71 (159)
|++++.++++. ++++++++.+ .. ...++..... ..++.+.+..+ .+..+|+.||+++..| .+.+++|||
T Consensus 345 li~a~~~l~~~--~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAm 422 (536)
T 3vue_A 345 MAAAIPELMQE--DVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGM 422 (536)
T ss_dssp HHHHHHHHTTS--SCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHH
T ss_pred HHHHHHHhHhh--CCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHH
Confidence 35666666654 4566554333 22 2333333222 35788877664 5788999999999765 267899999
Q ss_pred HhCCcEEEecCCCCCCchHHHHHHHHHHcCceee----------eccCCCChhHHHHHHHHHh---cCHHHHHHHHHHHH
Q 031484 72 ATGKPSILIPSPNVAEGHQFKNASLMAKLADSRI----------ITEDELDSITLETTIEEIL---GNEALMAEMSERAL 138 (159)
Q Consensus 72 ~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~----------~~~~~~~~~~l~~~l~~ll---~~~~~~~~~~~~~~ 138 (159)
++|+|+|+.... +..+.+.+...|+. +++.| ++.+++++.+++ +++.+ +++.+++-
T Consensus 423 a~G~PvI~s~~g--------G~~e~V~dg~~G~~~~~~~~~g~l~~~~d--~~~la~ai~ral~~~~~~~~-~~~~~~am 491 (536)
T 3vue_A 423 RYGTPCACASTG--------GLVDTVIEGKTGFHMGRLSVDCKVVEPSD--VKKVAATLKRAIKVVGTPAY-EEMVRNCM 491 (536)
T ss_dssp HTTCCEEECSCT--------HHHHHCCBTTTEEECCCCCSCTTCCCHHH--HHHHHHHHHHHHHHTTSHHH-HHHHHHHH
T ss_pred HcCCCEEEcCCC--------CchheeeCCCCccccccCCCceeEECCCC--HHHHHHHHHHHHHhcCcHHH-HHHHHHHH
Confidence 999999998653 23455566666763 33334 788999998766 45554 44554442
Q ss_pred hcCCCChHHHHHHHHHHhhh
Q 031484 139 KAAKPGASADIAQHILSLVE 158 (159)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~~~ 158 (159)
....+|+++|+..+++..
T Consensus 492 --~~~fSW~~~A~~y~~ly~ 509 (536)
T 3vue_A 492 --NQDLSWKGPAKNWENVLL 509 (536)
T ss_dssp --HSCCSSHHHHHHHHHHHH
T ss_pred --HhcCCHHHHHHHHHHHHH
Confidence 245688888888777653
No 51
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.24 E-value=1.5e-10 Score=92.49 Aligned_cols=144 Identities=11% Similarity=0.087 Sum_probs=99.6
Q ss_pred ChhhHHHHHhhcCCe----eEEEEcCcc-----cH----HHHHHHhhc---------CCCeEE-ecccc--cHHHHHhhC
Q 031484 1 MLNLYYQMLMEKHNL----FIIWQTGVE-----AF----NEMESLVRN---------HPRLLL-TPFLH--SMDLAYAAA 55 (159)
Q Consensus 1 ~~~~~~~~~~~~~~~----~~~~~~G~~-----~~----~~l~~~~~~---------~~~v~~-~~~~~--~~~~~l~~a 55 (159)
++++|..+++.+|++ ++++++++. .+ ++++++++. ..++.+ .++++ ++..+|+.|
T Consensus 273 ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~A 352 (482)
T 1uqt_A 273 RFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS 352 (482)
T ss_dssp HHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHc
Confidence 468899999988864 466565431 12 233333211 124664 56664 799999999
Q ss_pred ceEEecC---C-hHHHHHHHHhCC-----cEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcC
Q 031484 56 DLIVSRA---G-AMTCYEILATGK-----PSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGN 126 (159)
Q Consensus 56 d~~i~~~---G-~~t~~Eal~~g~-----P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~ 126 (159)
|+++..| | +.+++|+|+||+ |+|++...+. .+.+ ..|+.+++.| ++.++++|.+++++
T Consensus 353 Dv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~--------~~~l---~~g~lv~p~d--~~~lA~ai~~lL~~ 419 (482)
T 1uqt_A 353 DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA--------ANEL---TSALIVNPYD--RDEVAAALDRALTM 419 (482)
T ss_dssp SEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG--------GGTC---TTSEEECTTC--HHHHHHHHHHHHTC
T ss_pred cEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC--------HHHh---CCeEEECCCC--HHHHHHHHHHHHcC
Confidence 9999765 3 678999999998 8888765421 1122 2677888776 89999999999984
Q ss_pred -HHHHHHHHHHHHhcCCCChHHHHHHHHHHhh
Q 031484 127 -EALMAEMSERALKAAKPGASADIAQHILSLV 157 (159)
Q Consensus 127 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 157 (159)
+..++++.+++++....+++++.++..++.+
T Consensus 420 ~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l 451 (482)
T 1uqt_A 420 SLAERISRHAEMLDVIVKNDINHWQECFISDL 451 (482)
T ss_dssp CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 6677778777776665567777777776654
No 52
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.20 E-value=4.8e-11 Score=93.24 Aligned_cols=122 Identities=9% Similarity=-0.029 Sum_probs=92.4
Q ss_pred HHHHHhhcCCeeEEEEcCcccHHHHHHHhhcCCCeEEecccc--cHHHHHhhCceEEecC----ChHHHHHHH-------
Q 031484 5 YYQMLMEKHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLH--SMDLAYAAADLIVSRA----GAMTCYEIL------- 71 (159)
Q Consensus 5 ~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~--~~~~~l~~ad~~i~~~----G~~t~~Eal------- 71 (159)
+..+.+..++++++++ |.+. . +.....++|.++|+++ ++..+|+.||+++..+ .+.+++|||
T Consensus 238 ~~~l~~~~~~~~l~iv-G~g~---~-~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYl 312 (406)
T 2hy7_A 238 FVVASKAFPQVTFHVI-GSGM---G-RHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYD 312 (406)
T ss_dssp HHHHHHHCTTEEEEEE-SCSS---C-CCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHH
T ss_pred HHHHHHhCCCeEEEEE-eCch---H-HhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHh
Confidence 4566667899999776 4443 1 1122246899999995 7999999999998643 367889999
Q ss_pred HhCCcEEEecCCCCCCchHHHHHHHHHHcCceee-eccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChHHHHH
Q 031484 72 ATGKPSILIPSPNVAEGHQFKNASLMAKLADSRI-ITEDELDSITLETTIEEILGNEALMAEMSERALKAAKPGASADIA 150 (159)
Q Consensus 72 ~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (159)
++|+|+|+++. +.+...|++ ++.+| ++.|++++.++++|+. .......+|++++
T Consensus 313 a~G~PVIas~~--------------v~~~~~G~l~v~~~d--~~~la~ai~~ll~~~~---------~~~~~~~sw~~~a 367 (406)
T 2hy7_A 313 FFGLPAVCPNA--------------VVGPYKSRFGYTPGN--ADSVIAAITQALEAPR---------VRYRQCLNWSDTT 367 (406)
T ss_dssp HHTCCEEEEGG--------------GTCSCSSEEEECTTC--HHHHHHHHHHHHHCCC---------CCCSCCCBHHHHH
T ss_pred hCCCcEEEehh--------------cccCcceEEEeCCCC--HHHHHHHHHHHHhCcc---------hhhhhcCCHHHHH
Confidence 99999999842 344456888 87776 8999999999998876 1345677999999
Q ss_pred HHHHHh
Q 031484 151 QHILSL 156 (159)
Q Consensus 151 ~~i~~~ 156 (159)
+.++++
T Consensus 368 ~~~~~~ 373 (406)
T 2hy7_A 368 DRVLDP 373 (406)
T ss_dssp HHHHCG
T ss_pred HHHHHh
Confidence 988776
No 53
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.05 E-value=2.5e-09 Score=85.52 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=95.5
Q ss_pred ChhhHHHHHhhcCCee---EEEEcCc----c-cHHH----HHHHhhc------CCCeEEecccc--cHHHHHhhCceEEe
Q 031484 1 MLNLYYQMLMEKHNLF---IIWQTGV----E-AFNE----MESLVRN------HPRLLLTPFLH--SMDLAYAAADLIVS 60 (159)
Q Consensus 1 ~~~~~~~~~~~~~~~~---~~~~~G~----~-~~~~----l~~~~~~------~~~v~~~~~~~--~~~~~l~~ad~~i~ 60 (159)
++++| ++++.+|+++ +++++++ . .+.+ +++++.. ..+|.++++++ ++..+|+.||+++.
T Consensus 299 lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv 377 (496)
T 3t5t_A 299 AVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIF 377 (496)
T ss_dssp HHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEE
T ss_pred HHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEE
Confidence 36789 9999999864 5444422 1 2333 3333221 11688888764 78999999999997
Q ss_pred cC---C-hHHHHHHHHhC---CcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCH-HHHHH
Q 031484 61 RA---G-AMTCYEILATG---KPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNE-ALMAE 132 (159)
Q Consensus 61 ~~---G-~~t~~Eal~~g---~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~-~~~~~ 132 (159)
.| | +.+.+|+++|| .|+|+....+ .++.+. ..|+.+++.| ++.++++|.+++.++ +.+++
T Consensus 378 ~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG--------a~~~l~--~~allVnP~D--~~~lA~AI~~aL~m~~~er~~ 445 (496)
T 3t5t_A 378 NSTVDGQNLSTFEAPLVNERDADVILSETCG--------AAEVLG--EYCRSVNPFD--LVEQAEAISAALAAGPRQRAE 445 (496)
T ss_dssp CCSSBSCCSHHHHHHHHCSSCCEEEEETTBT--------THHHHG--GGSEEECTTB--HHHHHHHHHHHHHCCHHHHHH
T ss_pred CcccccCChhHHHHHHhCCCCCCEEEeCCCC--------CHHHhC--CCEEEECCCC--HHHHHHHHHHHHcCCHHHHHH
Confidence 65 4 57789999996 8888886652 122332 2578888877 899999999999864 56677
Q ss_pred HHHHHHhcCCCChHHHHHHHHH
Q 031484 133 MSERALKAAKPGASADIAQHIL 154 (159)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~i~ 154 (159)
+.+++++....+....-++..+
T Consensus 446 r~~~~~~~V~~~d~~~W~~~fl 467 (496)
T 3t5t_A 446 AAARRRDAARPWTLEAWVQAQL 467 (496)
T ss_dssp HHHHHHHHHTTCBHHHHHHHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHH
Confidence 7777777766665544444433
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=98.90 E-value=1.2e-08 Score=78.08 Aligned_cols=108 Identities=12% Similarity=0.067 Sum_probs=79.4
Q ss_pred cCCeeEEEEcCcccHHHHHHHhhcCCCeEEecccc--cHHHHHhhCceEEe-cCC----------hHHHHHHHHhCCcEE
Q 031484 12 KHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLH--SMDLAYAAADLIVS-RAG----------AMTCYEILATGKPSI 78 (159)
Q Consensus 12 ~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~--~~~~~l~~ad~~i~-~~G----------~~t~~Eal~~g~P~I 78 (159)
.+++++++++.+... ..+||+++|+.+ +++.+++.+|+.+. ..| ++.+.|+|++|+|+|
T Consensus 197 ~~~~~f~ivG~G~~~--------~l~nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI 268 (339)
T 3rhz_A 197 KYDIPLKVYTWQNVE--------LPQNVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVI 268 (339)
T ss_dssp CCSSCEEEEESCCCC--------CCTTEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEE
T ss_pred CCCCeEEEEeCCccc--------CcCCEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEE
Confidence 478888766444322 124999999996 78899987777554 233 456899999999999
Q ss_pred EecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 031484 79 LIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKAA 141 (159)
Q Consensus 79 ~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~ 141 (159)
+.+.+. ..+.+.+.++|+.++. .+++.+.+..+ +++.+++|++++++.+
T Consensus 269 ~~~~~~--------~~~~v~~~~~G~~~~~----~~e~~~~i~~l--~~~~~~~m~~na~~~a 317 (339)
T 3rhz_A 269 VQEGIA--------NQELIENNGLGWIVKD----VEEAIMKVKNV--NEDEYIELVKNVRSFN 317 (339)
T ss_dssp EETTCT--------TTHHHHHHTCEEEESS----HHHHHHHHHHC--CHHHHHHHHHHHHHHT
T ss_pred EccChh--------HHHHHHhCCeEEEeCC----HHHHHHHHHHh--CHHHHHHHHHHHHHHH
Confidence 986542 3456788899998863 67888888876 3667889999987664
No 55
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.85 E-value=9.5e-08 Score=78.05 Aligned_cols=133 Identities=10% Similarity=0.070 Sum_probs=91.1
Q ss_pred hhhHHHHHhhcCCeeEEE-EcCc--cc-HHHHHHHh--hcCCCeEEecccc--cHHHHHhhCceEEec---CChHHHHHH
Q 031484 2 LNLYYQMLMEKHNLFIIW-QTGV--EA-FNEMESLV--RNHPRLLLTPFLH--SMDLAYAAADLIVSR---AGAMTCYEI 70 (159)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-~~G~--~~-~~~l~~~~--~~~~~v~~~~~~~--~~~~~l~~ad~~i~~---~G~~t~~Ea 70 (159)
++.|.+++++.|+-.+++ ..|. +. ...+++.. +-.+++.|.+..+ +....++.+|+++-. +|++|.+||
T Consensus 458 l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~GgtTtlEA 537 (631)
T 3q3e_A 458 LEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFGNTNGIIDM 537 (631)
T ss_dssp HHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSCCSHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcccCChHHHHH
Confidence 578999999998865432 3452 22 22222221 1135889999886 455778999999953 467888999
Q ss_pred HHhCCcEEEecCCCCCCchHHHHHHHHHHcCcee-eeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 031484 71 LATGKPSILIPSPNVAEGHQFKNASLMAKLADSR-IITEDELDSITLETTIEEILGNEALMAEMSERALKA 140 (159)
Q Consensus 71 l~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~-~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~ 140 (159)
|++|+|+|..+... -.....+..+...|..- .+.. + .+...+...++..|++.+++++++.++.
T Consensus 538 LwmGVPVVTl~G~~---~asRvgaSlL~~~GLpE~LIA~-d--~eeYv~~Av~La~D~~~l~~LR~~Lr~~ 602 (631)
T 3q3e_A 538 VTLGLVGVCKTGAE---VHEHIDEGLFKRLGLPEWLIAN-T--VDEYVERAVRLAENHQERLELRRYIIEN 602 (631)
T ss_dssp HHTTCCEEEECCSS---HHHHHHHHHHHHTTCCGGGEES-S--HHHHHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred HHcCCCEEeccCCc---HHHHhHHHHHHhcCCCcceecC-C--HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999986532 11223345566667653 2333 2 6889999999999999999999987655
No 56
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=98.72 E-value=1.6e-07 Score=77.45 Aligned_cols=102 Identities=16% Similarity=0.020 Sum_probs=73.3
Q ss_pred cHHHHHhhCceEEecC----ChHHHHHHHHhCCcEEEecCCCCCCchHHHHHHHHHHc-------Cceeeecc-CCCChh
Q 031484 47 SMDLAYAAADLIVSRA----GAMTCYEILATGKPSILIPSPNVAEGHQFKNASLMAKL-------ADSRIITE-DELDSI 114 (159)
Q Consensus 47 ~~~~~l~~ad~~i~~~----G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~~~~~~~~~-------~~g~~~~~-~~~~~~ 114 (159)
++.++|+.||+++.+| .+.+++|||+||+|+|++..++ ..+.+.+. +.|+.+.. .+.+++
T Consensus 511 d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG--------~~d~V~dg~~~~~~~~tG~lV~~rd~~d~e 582 (725)
T 3nb0_A 511 DYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG--------FGSYMEDLIETNQAKDYGIYIVDRRFKAPD 582 (725)
T ss_dssp CHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBH--------HHHHHHTTSCHHHHHHTTEEEECCSSSCHH
T ss_pred HHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCC--------hhhhhhccccccCCCCceEEEeCCCCCCHH
Confidence 4789999999999876 3788999999999999997642 22334332 35766532 222355
Q ss_pred H----HHHHHHHHhc-CHHHHHHHHHHHHhcCCCChHHHHHHHHHHh
Q 031484 115 T----LETTIEEILG-NEALMAEMSERALKAAKPGASADIAQHILSL 156 (159)
Q Consensus 115 ~----l~~~l~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 156 (159)
. |++++..++. ++..++.|+.++++.....+|+++++..+++
T Consensus 583 e~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~ 629 (725)
T 3nb0_A 583 ESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKA 629 (725)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5 4444444443 6778899999998888888999998887765
No 57
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.47 E-value=8.7e-06 Score=68.04 Aligned_cols=149 Identities=15% Similarity=0.184 Sum_probs=100.1
Q ss_pred hhhHHHHHhhcCCeeEEEEcCcc-cHHHHHHHhhc----CCCeEEecccc--cHHHHHhhCceEEe---cCChHHHHHHH
Q 031484 2 LNLYYQMLMEKHNLFIIWQTGVE-AFNEMESLVRN----HPRLLLTPFLH--SMDLAYAAADLIVS---RAGAMTCYEIL 71 (159)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~G~~-~~~~l~~~~~~----~~~v~~~~~~~--~~~~~l~~ad~~i~---~~G~~t~~Eal 71 (159)
++.|.+||++-|+-++++..++. ....+.+.++. ..++.|.+..+ +....+..+|+++- .+|++|.+||+
T Consensus 540 ~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~Di~LDt~p~~g~tT~~eal 619 (723)
T 4gyw_A 540 LQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVL 619 (723)
T ss_dssp HHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCCeEEeCCCCcCCHHHHHHHH
Confidence 46789999999998886665543 23444444322 34789998875 44466788999983 34667789999
Q ss_pred HhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHHHHHHHHHHHHhc---CCCChHHH
Q 031484 72 ATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEALMAEMSERALKA---AKPGASAD 148 (159)
Q Consensus 72 ~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~---~~~~~~~~ 148 (159)
.+|+|+|..+-..+. ....+..+...|..-.+..+ .++-.+...++-.|++++.+++.+.+.. ..-....+
T Consensus 620 ~~GvPvvt~~g~~~~---sR~~~s~l~~~gl~e~ia~~---~~~Y~~~a~~la~d~~~l~~lr~~l~~~~~~s~l~d~~~ 693 (723)
T 4gyw_A 620 WAGTPMVTMPGETLA---SRVAASQLTCLGCLELIAKN---RQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQ 693 (723)
T ss_dssp HTTCCEEBCCCSSGG---GTHHHHHHHHHTCGGGBCSS---HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHH
T ss_pred HcCCCEEEccCCCcc---HhHHHHHHHHcCCcccccCC---HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCcCcCHHH
Confidence 999999998654322 22345667777765445432 6777777888889999888887776433 12234555
Q ss_pred HHHHHHHh
Q 031484 149 IAQHILSL 156 (159)
Q Consensus 149 ~~~~i~~~ 156 (159)
.+..+++.
T Consensus 694 ~~~~le~a 701 (723)
T 4gyw_A 694 YTMELERL 701 (723)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 56665554
No 58
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=97.35 E-value=0.00087 Score=50.25 Aligned_cols=114 Identities=15% Similarity=0.156 Sum_probs=66.0
Q ss_pred hHHHHHhhc--CCeeEEEEcCcc-cHHHHHHHhhcCCCeEEeccc--ccHHHHHhhCceEEec-CChHHHHHHHHhCCcE
Q 031484 4 LYYQMLMEK--HNLFIIWQTGVE-AFNEMESLVRNHPRLLLTPFL--HSMDLAYAAADLIVSR-AGAMTCYEILATGKPS 77 (159)
Q Consensus 4 ~~~~~~~~~--~~~~~~~~~G~~-~~~~l~~~~~~~~~v~~~~~~--~~~~~~l~~ad~~i~~-~G~~t~~Eal~~g~P~ 77 (159)
.|.++.+.. .++++++..|.. +.+..++..+..+++.+.+-. .++..+++.||++|+. +|+..+ |.++|+|+
T Consensus 198 ~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~l~I~~DSG~~Hl--Aaa~g~P~ 275 (326)
T 2gt1_A 198 HWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHL--TAALDRPN 275 (326)
T ss_dssp HHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCSEEEEESSHHHHH--HHHTTCCE
T ss_pred HHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCCEEEecCCcHHHH--HHHcCCCE
Confidence 455555442 377887664543 333333333333566666544 4788999999999987 676553 66799999
Q ss_pred EEecCCCCCCchHHHHHHHHHHcCceeeec-----cCCCChhHHHHHHHHHhcC
Q 031484 78 ILIPSPNVAEGHQFKNASLMAKLADSRIIT-----EDELDSITLETTIEEILGN 126 (159)
Q Consensus 78 I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~-----~~~~~~~~l~~~l~~ll~~ 126 (159)
|++-.+. +... .... .....++. .++++++++.+++.+++++
T Consensus 276 v~lfg~t---~p~~--~~P~--~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 276 ITVYGPT---DPGL--IGGY--GKNQMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEEESSS---CHHH--HCCC--SSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred EEEECCC---Chhh--cCCC--CCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 9872221 1110 0000 01111221 2467789999888888764
No 59
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.35 E-value=0.00057 Score=51.55 Aligned_cols=65 Identities=14% Similarity=0.135 Sum_probs=43.1
Q ss_pred CeeEEEEcCcccHHHHHHHhhcC-----CCe-EEeccc--ccHHHHHhhCceEEec-CChHHHHHHHHhCCcEEEe
Q 031484 14 NLFIIWQTGVEAFNEMESLVRNH-----PRL-LLTPFL--HSMDLAYAAADLIVSR-AGAMTCYEILATGKPSILI 80 (159)
Q Consensus 14 ~~~~~~~~G~~~~~~l~~~~~~~-----~~v-~~~~~~--~~~~~~l~~ad~~i~~-~G~~t~~Eal~~g~P~I~~ 80 (159)
++++++.+|+.+.+..++..+.. .++ .+.+.. .++..+++.||++|+. +|+.. -|.++|+|+|++
T Consensus 213 ~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Dsg~~H--lAaa~g~P~v~l 286 (348)
T 1psw_A 213 GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMH--VAAALNRPLVAL 286 (348)
T ss_dssp TCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESSHHHH--HHHHTTCCEEEE
T ss_pred CCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCCHHHH--HHHHcCCCEEEE
Confidence 78887765555444333333221 234 445544 4788999999999997 55443 488999999987
No 60
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.04 E-value=0.0025 Score=48.58 Aligned_cols=65 Identities=14% Similarity=0.292 Sum_probs=44.1
Q ss_pred CeeEEEEcCcccHHHHHHHhhcC-C-CeEEeccc--ccHHHHHhhCceEEec-CChHHHHHHHHhCCcEEEe
Q 031484 14 NLFIIWQTGVEAFNEMESLVRNH-P-RLLLTPFL--HSMDLAYAAADLIVSR-AGAMTCYEILATGKPSILI 80 (159)
Q Consensus 14 ~~~~~~~~G~~~~~~l~~~~~~~-~-~v~~~~~~--~~~~~~l~~ad~~i~~-~G~~t~~Eal~~g~P~I~~ 80 (159)
++++++.+|+.+.+..++..... . .+.+.+-. .++..+++.||++|+. +|++.+ |.++|+|+|++
T Consensus 217 g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~~~i~~DsG~~Hl--Aaa~g~P~v~l 286 (349)
T 3tov_A 217 GYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCNLLITNDSGPMHV--GISQGVPIVAL 286 (349)
T ss_dssp TCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCSEEEEESSHHHHH--HHTTTCCEEEE
T ss_pred CCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCCEEEECCCCHHHH--HHhcCCCEEEE
Confidence 67887765555554444443321 2 34444433 4788999999999996 665553 88999999987
No 61
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=95.28 E-value=0.043 Score=45.72 Aligned_cols=100 Identities=9% Similarity=0.088 Sum_probs=63.0
Q ss_pred ccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccC-------CCChhHHHH
Q 031484 46 HSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITED-------ELDSITLET 118 (159)
Q Consensus 46 ~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~-------~~~~~~l~~ 118 (159)
+++.++|..||+.||.-.+ .+.|.+.+++|+|..... -++. .+...|+.+... --+.++|.+
T Consensus 607 ~di~~ll~~aD~lITDySS-v~fD~~~l~kPiif~~~D----~~~Y------~~~~rg~y~d~~~~~pg~~~~~~~eL~~ 675 (729)
T 3l7i_A 607 NDVSELFLISDCLITDYSS-VMFDYGILKRPQFFFAYD----IDKY------DKGLRGFYMNYMEDLPGPIYTEPYGLAK 675 (729)
T ss_dssp SCHHHHHHTCSEEEESSCT-HHHHHGGGCCCEEEECTT----TTTT------TSSCCSBSSCTTSSSSSCEESSHHHHHH
T ss_pred cCHHHHHHHhCEEEeechH-HHHhHHhhCCCEEEecCC----HHHH------hhccCCcccChhHhCCCCeECCHHHHHH
Confidence 4788999999999997554 578999999999987432 1111 111112221110 012677888
Q ss_pred HHHHHhcCH----HHHHHHHHHHHhcCCCChHHHHHHHHHHh
Q 031484 119 TIEEILGNE----ALMAEMSERALKAAKPGASADIAQHILSL 156 (159)
Q Consensus 119 ~l~~ll~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 156 (159)
+|......+ +.++.+.+....+.++.+++++++.|.+.
T Consensus 676 ~i~~~~~~~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~ 717 (729)
T 3l7i_A 676 ELKNLDKVQQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKD 717 (729)
T ss_dssp HHTTHHHHHHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHH
T ss_pred HHhhhhccchhHHHHHHHHHHHhCCccCChHHHHHHHHHHhc
Confidence 887765432 23344444444555778999999998864
No 62
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=92.48 E-value=0.57 Score=31.70 Aligned_cols=31 Identities=29% Similarity=0.336 Sum_probs=24.8
Q ss_pred HHHhhCceEEec--C---ChHHHHH---HHHhCCcEEEe
Q 031484 50 LAYAAADLIVSR--A---GAMTCYE---ILATGKPSILI 80 (159)
Q Consensus 50 ~~l~~ad~~i~~--~---G~~t~~E---al~~g~P~I~~ 80 (159)
+.+..||++|.. + -.+|.+| |.+.|+|++..
T Consensus 65 ~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~ 103 (162)
T 3ehd_A 65 ENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVAL 103 (162)
T ss_dssp HHHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 558899999862 2 3688889 78899999987
No 63
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=91.48 E-value=0.69 Score=31.25 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=26.3
Q ss_pred HHHHhhCceEEec--C--C----hHHHHH---HHHhCCcEEEec
Q 031484 49 DLAYAAADLIVSR--A--G----AMTCYE---ILATGKPSILIP 81 (159)
Q Consensus 49 ~~~l~~ad~~i~~--~--G----~~t~~E---al~~g~P~I~~p 81 (159)
...+..||++|.. + | .+|..| |.+.|+|+++..
T Consensus 62 ~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 62 IQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp HHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 4788999999854 1 2 688899 778999999874
No 64
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=90.07 E-value=0.49 Score=31.68 Aligned_cols=70 Identities=23% Similarity=0.282 Sum_probs=41.1
Q ss_pred HHHhhCceEEec---CChHHHHH---HHHhCCcEEEecCCCCCCchHHHHHHHHHH-c---CceeeeccCCCChhHHHHH
Q 031484 50 LAYAAADLIVSR---AGAMTCYE---ILATGKPSILIPSPNVAEGHQFKNASLMAK-L---ADSRIITEDELDSITLETT 119 (159)
Q Consensus 50 ~~l~~ad~~i~~---~G~~t~~E---al~~g~P~I~~p~~~~~~~~q~~~~~~~~~-~---~~g~~~~~~~~~~~~l~~~ 119 (159)
.++..||++|.. ...+|.+| |.+.|+|+++.-.+. .+. ..+.+.+ . ....+...++ +.+.+.
T Consensus 64 ~~i~~aD~vvA~l~~~d~Gt~~EiG~A~algkPV~~l~~~~--~~~---~ls~mi~G~~~~~~~~~~~Y~~---~el~~i 135 (152)
T 4fyk_A 64 NWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQ--SGR---VLSAMIRGAADGSRFQVWDYAE---GEVETM 135 (152)
T ss_dssp HHHHHCSEEEEECSSCCHHHHHHHHHHHHTTCCEEEEECGG--GSC---CCCHHHHHHCCSSSEEEEECCT---TCHHHH
T ss_pred HHHHHCCEEEEeCCCCCCCHHHHHHHHHHcCCeEEEEEeCC--ccc---hhHHHHcCCCCCCeEEEEEecH---HHHHHH
Confidence 678899999863 34678888 678999999863321 001 1122221 1 2233344443 678888
Q ss_pred HHHHhcCH
Q 031484 120 IEEILGNE 127 (159)
Q Consensus 120 l~~ll~~~ 127 (159)
|.+++.+.
T Consensus 136 l~~f~~~~ 143 (152)
T 4fyk_A 136 LDRYFEAY 143 (152)
T ss_dssp HHHHHC--
T ss_pred HHHHHHhh
Confidence 88877643
No 65
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=90.02 E-value=1.4 Score=30.08 Aligned_cols=67 Identities=13% Similarity=0.243 Sum_probs=39.9
Q ss_pred HHHhhCceEEe-cCChHH---HHHHHHhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhc
Q 031484 50 LAYAAADLIVS-RAGAMT---CYEILATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 50 ~~l~~ad~~i~-~~G~~t---~~Eal~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
.+...||.+|. .+|.+| +.|++..++|+++++. | + ....++.......+...++ ++.+.+.+.+++.
T Consensus 103 ~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~--~--~---~~~gfi~~~~~~~i~~~~~--~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 103 INALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGT--Q--P---EAEKFFTSLDAGLVHVAAD--VAGAIAAVKQLLA 173 (176)
T ss_dssp CCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESC--C--H---HHHHHHHHHCTTTEEEESS--HHHHHHHHHHHHH
T ss_pred HHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcC--c--c---cccccCChhhcCeEEEcCC--HHHHHHHHHHHHH
Confidence 34568999875 445566 4557779999999975 1 2 1223444333322222333 7888888877653
No 66
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=89.70 E-value=0.53 Score=31.82 Aligned_cols=32 Identities=28% Similarity=0.346 Sum_probs=26.3
Q ss_pred HHHhhCceEEecC---ChHHHHH---HHHhCCcEEEec
Q 031484 50 LAYAAADLIVSRA---GAMTCYE---ILATGKPSILIP 81 (159)
Q Consensus 50 ~~l~~ad~~i~~~---G~~t~~E---al~~g~P~I~~p 81 (159)
+++..||++|... ..+|.+| |.+.|+|++..-
T Consensus 73 ~~i~~aD~vva~~~~~d~Gt~~EiGyA~algKPVi~l~ 110 (165)
T 2khz_A 73 NWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLF 110 (165)
T ss_dssp HHHHHCSEEEEECSSCCHHHHHHHHHHHHTCSSEEEEE
T ss_pred HHHHhCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 6889999998644 4788899 778999999873
No 67
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=89.42 E-value=0.63 Score=31.63 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=25.8
Q ss_pred HHHhhCceEEe-----cCChHHHHH---HHHhCCcEEEec
Q 031484 50 LAYAAADLIVS-----RAGAMTCYE---ILATGKPSILIP 81 (159)
Q Consensus 50 ~~l~~ad~~i~-----~~G~~t~~E---al~~g~P~I~~p 81 (159)
+.+..||++|. ..-.+|.+| |.+.|+|++...
T Consensus 77 ~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~ 116 (167)
T 1s2d_A 77 TGISNATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILVP 116 (167)
T ss_dssp HHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHhCCEEEEECCCCCCCCCceeehhhHhhCCCeEEEEE
Confidence 56789999986 334688889 778999999984
No 68
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=88.59 E-value=2.8 Score=29.67 Aligned_cols=35 Identities=20% Similarity=0.117 Sum_probs=25.7
Q ss_pred HHHHHhhCceEEec-CChHHHHHHH---------HhCCcEEEecC
Q 031484 48 MDLAYAAADLIVSR-AGAMTCYEIL---------ATGKPSILIPS 82 (159)
Q Consensus 48 ~~~~l~~ad~~i~~-~G~~t~~Eal---------~~g~P~I~~p~ 82 (159)
...++..||.+|.- +|.+|+-|.+ ..++|+++...
T Consensus 99 k~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 99 KAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp HHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred HHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 44556799998864 5578877765 36999999854
No 69
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=87.13 E-value=3.6 Score=28.47 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=25.9
Q ss_pred HHHHHhhCceEEecC-ChHHHHHHHH---------hCCcEEEecC
Q 031484 48 MDLAYAAADLIVSRA-GAMTCYEILA---------TGKPSILIPS 82 (159)
Q Consensus 48 ~~~~l~~ad~~i~~~-G~~t~~Eal~---------~g~P~I~~p~ 82 (159)
...++..||++|.-+ |.+|+-|.+. .++|+++...
T Consensus 102 k~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 102 KQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp HHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred HHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 456678999998755 5688777553 4899999854
No 70
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=86.01 E-value=3.2 Score=25.72 Aligned_cols=68 Identities=10% Similarity=0.139 Sum_probs=39.4
Q ss_pred CCeeEEEEcCccc-----HHHHHHHhhcCC-CeEE--ecccccHHHHHhhCceEEecCChHHHHH---HH--HhCCcEEE
Q 031484 13 HNLFIIWQTGVEA-----FNEMESLVRNHP-RLLL--TPFLHSMDLAYAAADLIVSRAGAMTCYE---IL--ATGKPSIL 79 (159)
Q Consensus 13 ~~~~~~~~~G~~~-----~~~l~~~~~~~~-~v~~--~~~~~~~~~~l~~ad~~i~~~G~~t~~E---al--~~g~P~I~ 79 (159)
|..+++++||.+- ...+++.+...+ .+.+ .+. .++...+..+|++++...-.-..+ .. -.++|++.
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~~-~~~~~~~~~~D~Ii~t~~l~~~~~~~~~~~~~~~~pv~~ 81 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIAE-TRLSEVVDRFDVVLLAPQSRFNKKRLEEITKPKGIPIEI 81 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEECS-TTHHHHTTTCSEEEECSCCSSHHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEecH-HHHHhhcCCCCEEEECCccHHHHHHHHHHhcccCCCEEE
Confidence 4467889999851 345555443322 2333 333 356667889999998654211112 21 26899998
Q ss_pred ec
Q 031484 80 IP 81 (159)
Q Consensus 80 ~p 81 (159)
++
T Consensus 82 I~ 83 (109)
T 2l2q_A 82 IN 83 (109)
T ss_dssp CC
T ss_pred EC
Confidence 74
No 71
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=84.91 E-value=1.3 Score=29.63 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=25.3
Q ss_pred HHHhhCceEEec-----CChHHHHH---HHHhCCcEEEec
Q 031484 50 LAYAAADLIVSR-----AGAMTCYE---ILATGKPSILIP 81 (159)
Q Consensus 50 ~~l~~ad~~i~~-----~G~~t~~E---al~~g~P~I~~p 81 (159)
+.+..||++|.- .-.+|.+| |.+.|+|++...
T Consensus 74 ~~i~~aD~vvA~ldg~~~D~GT~~EiGyA~A~gkPVv~~~ 113 (157)
T 1f8y_A 74 NGIKTNDIMLGVYIPDEEDVGLGMELGYALSQGKYVLLVI 113 (157)
T ss_dssp HHHHTSSEEEEECCGGGCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHhCCEEEEEcCCCCCCccHHHHHHHHHHCCCeEEEEE
Confidence 567899998753 23688899 788999999874
No 72
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=82.52 E-value=1.6 Score=30.33 Aligned_cols=30 Identities=27% Similarity=0.288 Sum_probs=24.0
Q ss_pred hhCceEEecCChHHHHHHHHhCCcEEEecCC
Q 031484 53 AAADLIVSRAGAMTCYEILATGKPSILIPSP 83 (159)
Q Consensus 53 ~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~ 83 (159)
..+|++||++|+...+... .++|+|-++..
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s 79 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVT 79 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCC
Confidence 4689999998876666653 68999999875
No 73
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=81.44 E-value=3.6 Score=28.58 Aligned_cols=35 Identities=31% Similarity=0.320 Sum_probs=25.3
Q ss_pred HHHHHhhCceEEe-cCChHH---HHHHHHhCCcEEEecC
Q 031484 48 MDLAYAAADLIVS-RAGAMT---CYEILATGKPSILIPS 82 (159)
Q Consensus 48 ~~~~l~~ad~~i~-~~G~~t---~~Eal~~g~P~I~~p~ 82 (159)
...+...||.+|. .+|.+| +.|++..++|+++++.
T Consensus 112 k~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 112 SFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 3455678999886 445566 4557789999999964
No 74
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=80.03 E-value=3.2 Score=30.19 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=25.4
Q ss_pred hhCceEEecCChHHHHHHHHh------CCcEEEecC
Q 031484 53 AAADLIVSRAGAMTCYEILAT------GKPSILIPS 82 (159)
Q Consensus 53 ~~ad~~i~~~G~~t~~Eal~~------g~P~I~~p~ 82 (159)
..+|++|+-+|.+|+++++.. ++|++-++.
T Consensus 34 ~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 468999999999999998764 889998864
No 75
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=79.78 E-value=12 Score=25.65 Aligned_cols=35 Identities=29% Similarity=0.153 Sum_probs=24.8
Q ss_pred HHHHHhhCceEEecC-ChHHHHH---HHH------hCCcEEEecC
Q 031484 48 MDLAYAAADLIVSRA-GAMTCYE---ILA------TGKPSILIPS 82 (159)
Q Consensus 48 ~~~~l~~ad~~i~~~-G~~t~~E---al~------~g~P~I~~p~ 82 (159)
...+...||.+|.-+ |.+|+-| ++. .++|+++...
T Consensus 91 k~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 91 KAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred HHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 445567999988644 5688655 553 6899999854
No 76
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=77.51 E-value=4.6 Score=28.15 Aligned_cols=35 Identities=23% Similarity=0.244 Sum_probs=25.5
Q ss_pred HHHHHhhCceEEecC-ChHHHHHHH---H------hCCcEEEecC
Q 031484 48 MDLAYAAADLIVSRA-GAMTCYEIL---A------TGKPSILIPS 82 (159)
Q Consensus 48 ~~~~l~~ad~~i~~~-G~~t~~Eal---~------~g~P~I~~p~ 82 (159)
...++..||++|.-+ |.+|+-|.+ . .++|+++...
T Consensus 111 k~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 111 KREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp HHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred HHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 445668999988755 568876654 3 4899999864
No 77
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=77.49 E-value=21 Score=27.08 Aligned_cols=79 Identities=13% Similarity=0.153 Sum_probs=43.8
Q ss_pred HHHHHhhcCCeeEEEEcCcccHHHHHHHhhcCCCeEEeccc-c--------cHHHHHh--hCceEEecCChHHHHH----
Q 031484 5 YYQMLMEKHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFL-H--------SMDLAYA--AADLIVSRAGAMTCYE---- 69 (159)
Q Consensus 5 ~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~-~--------~~~~~l~--~ad~~i~~~G~~t~~E---- 69 (159)
+.+.++.+..-++++++|+....-.++..+....+.+++-+ + +..+.+. .+|++|+-+|+ +++.
T Consensus 28 l~~~l~~~g~~rvliVtd~~~~~~~~~v~~~L~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGG-s~iD~aK~ 106 (364)
T 3iv7_A 28 LKQEVERRGSAKVMVIAGEREMSIAHKVASEIEVAIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGG-STIGLAKA 106 (364)
T ss_dssp HHHHHHHHTCSSEEEECCGGGHHHHHHHTTTSCCSEEECCCCTTCBHHHHHHHHHHHHHTTCCEEEEEESH-HHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEECCCHHHHHHHHHHHcCCCEEEcceecCCCHHHHHHHHHHHHhcCCCEEEEeCCc-HHHHHHHH
Confidence 34556655434788889986433222222222233343322 1 1223332 68999987664 3344
Q ss_pred -HHHhCCcEEEecCCC
Q 031484 70 -ILATGKPSILIPSPN 84 (159)
Q Consensus 70 -al~~g~P~I~~p~~~ 84 (159)
+...++|+|.+|..-
T Consensus 107 iA~~~~~P~i~IPTTa 122 (364)
T 3iv7_A 107 IAMTTALPIVAIPTTY 122 (364)
T ss_dssp HHHHHCCCEEEEECSS
T ss_pred HHhccCCCEEEEcCCc
Confidence 345799999999864
No 78
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=74.99 E-value=3 Score=31.10 Aligned_cols=56 Identities=23% Similarity=0.248 Sum_probs=43.7
Q ss_pred HHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHHHHHHHHhCCcEEEecCC
Q 031484 27 NEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILATGKPSILIPSP 83 (159)
Q Consensus 27 ~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~ 83 (159)
++++++-+.+|+..+.-|+..-.++-+.||++.|.|+...+.+.+ -+..+|+.|..
T Consensus 92 e~v~~~k~~~Pda~vV~y~n~saeVka~aD~v~TSsna~~~v~~~-~~~~iif~pD~ 147 (300)
T 1wzu_A 92 EHILEAKRKYPNAPVVLYVNSTAEAKAYADVTVTSANAVEVVKKL-DSDVVIFGPDK 147 (300)
T ss_dssp HHHHHHHHHSTTSCEEEESSSCHHHHTTCSEEECTTTHHHHHHTC-SCSEEEEESCH
T ss_pred HHHHHHHHHCCCCeEEEecCChHHHHHhCCEEEchHHHHHHHHhC-CCCeEEEECCh
Confidence 444443334678888888877789999999999999988888876 78889998753
No 79
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=73.86 E-value=8.7 Score=29.63 Aligned_cols=34 Identities=18% Similarity=0.164 Sum_probs=26.7
Q ss_pred HHHHhhCceEEecCChHHHHHHHHh----CC-cEEEecC
Q 031484 49 DLAYAAADLIVSRAGAMTCYEILAT----GK-PSILIPS 82 (159)
Q Consensus 49 ~~~l~~ad~~i~~~G~~t~~Eal~~----g~-P~I~~p~ 82 (159)
...-..+|++|+-+|.+|++.++.. ++ |++-++.
T Consensus 109 ~~~~~~~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 109 QDIVNRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHHHHHCSEEEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred hhcccCCCEEEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 3445689999999999999998753 56 7998854
No 80
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=72.46 E-value=3.9 Score=29.90 Aligned_cols=32 Identities=22% Similarity=0.020 Sum_probs=26.0
Q ss_pred HHhhCceEEecCChHHHHHHHH----hCCcEEEecC
Q 031484 51 AYAAADLIVSRAGAMTCYEILA----TGKPSILIPS 82 (159)
Q Consensus 51 ~l~~ad~~i~~~G~~t~~Eal~----~g~P~I~~p~ 82 (159)
.-..+|++|+-+|.+|+++++. .++|++-++.
T Consensus 60 ~~~~~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 60 IGQQADLAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHCSEEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cccCCCEEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 4467899999999999999874 2789988863
No 81
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=71.29 E-value=8.2 Score=27.17 Aligned_cols=34 Identities=24% Similarity=0.221 Sum_probs=24.3
Q ss_pred HHHHhhCceEEe-cCChHHHHHHH---H------hCCcEEEecC
Q 031484 49 DLAYAAADLIVS-RAGAMTCYEIL---A------TGKPSILIPS 82 (159)
Q Consensus 49 ~~~l~~ad~~i~-~~G~~t~~Eal---~------~g~P~I~~p~ 82 (159)
..+...||.+|. .+|.+|+-|.+ . .++|+++...
T Consensus 104 ~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 104 AEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp HHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred HHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 345678999886 45578876655 3 2899999854
No 82
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=71.26 E-value=31 Score=26.08 Aligned_cols=79 Identities=16% Similarity=0.059 Sum_probs=45.8
Q ss_pred hHHHHHhhcCCeeEEEEcCccc---HHHHHHHhhcCCCeEEeccc-c-----c---HHHHH--hhCceEEecCChHHHHH
Q 031484 4 LYYQMLMEKHNLFIIWQTGVEA---FNEMESLVRNHPRLLLTPFL-H-----S---MDLAY--AAADLIVSRAGAMTCYE 69 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~G~~~---~~~l~~~~~~~~~v~~~~~~-~-----~---~~~~l--~~ad~~i~~~G~~t~~E 69 (159)
.+.+.++....-++++++|+.. .+++.+.++. ..+.+++-+ + . ..+.+ ..+|++|+=+|+ +++.
T Consensus 26 ~l~~~l~~~g~~r~liVtd~~~~~~~~~v~~~L~~-~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGG-sviD 103 (358)
T 3jzd_A 26 QVAAEVERLGAKRALVLCTPNQQAEAERIADLLGP-LSAGVYAGAVMHVPIESARDATARAREAGADCAVAVGGG-STTG 103 (358)
T ss_dssp GHHHHHHHTTCSCEEEECCGGGHHHHHHHHHHHGG-GEEEEECCCCTTCBHHHHHHHHHHHHHHTCSEEEEEESH-HHHH
T ss_pred HHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHhcc-CCEEEecCCcCCCCHHHHHHHHHHhhccCCCEEEEeCCc-HHHH
Confidence 3455566654347888898863 3444444432 234444432 1 1 22333 378999987664 3344
Q ss_pred -----HHHhCCcEEEecCCC
Q 031484 70 -----ILATGKPSILIPSPN 84 (159)
Q Consensus 70 -----al~~g~P~I~~p~~~ 84 (159)
+...++|+|.+|...
T Consensus 104 ~aK~iA~~~~~p~i~IPTT~ 123 (358)
T 3jzd_A 104 LGKAIALETGMPIVAIPTTY 123 (358)
T ss_dssp HHHHHHHHHCCCEEEEECSS
T ss_pred HHHHHHhccCCCEEEEeCCc
Confidence 345799999999874
No 83
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=70.12 E-value=33 Score=25.88 Aligned_cols=79 Identities=18% Similarity=0.067 Sum_probs=45.8
Q ss_pred hHHHHHhhcCCeeEEEEcCccc---HHHHHHHhhcCCCeEEeccc---c---cH---HHHH--hhCceEEecCChHHHHH
Q 031484 4 LYYQMLMEKHNLFIIWQTGVEA---FNEMESLVRNHPRLLLTPFL---H---SM---DLAY--AAADLIVSRAGAMTCYE 69 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~G~~~---~~~l~~~~~~~~~v~~~~~~---~---~~---~~~l--~~ad~~i~~~G~~t~~E 69 (159)
.+.+.++.+..-++++++|+.. .+++.+.++. ..+.+++-+ + .+ .+.+ ..+|++|+-+|+ +++.
T Consensus 24 ~l~~~l~~~g~~r~liVtd~~~~~~~~~v~~~L~~-~~~~v~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGG-s~iD 101 (353)
T 3hl0_A 24 DVAEEIRRLGLSRALVLSTPQQKGDAEALASRLGR-LAAGVFSEAAMHTPVEVTKTAVEAYRAAGADCVVSLGGG-STTG 101 (353)
T ss_dssp GHHHHHHHTTCCCEEEECCGGGHHHHHHHHHHHGG-GEEEEECCCCTTCBHHHHHHHHHHHHHTTCSEEEEEESH-HHHH
T ss_pred HHHHHHHHhCCCEEEEEecCchhhHHHHHHHHHhh-CCcEEecCcCCCCcHHHHHHHHHHHhccCCCEEEEeCCc-HHHH
Confidence 4455566654347888888853 3444444432 234444332 1 12 2333 268999986664 3344
Q ss_pred -----HHHhCCcEEEecCCC
Q 031484 70 -----ILATGKPSILIPSPN 84 (159)
Q Consensus 70 -----al~~g~P~I~~p~~~ 84 (159)
+...++|+|.+|..-
T Consensus 102 ~aK~iA~~~~~p~i~IPTTa 121 (353)
T 3hl0_A 102 LGKAIALRTDAAQIVIPTTY 121 (353)
T ss_dssp HHHHHHHHHCCEEEEEECSS
T ss_pred HHHHHHhccCCCEEEEeCCc
Confidence 345799999999864
No 84
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=68.52 E-value=3.5 Score=29.71 Aligned_cols=30 Identities=30% Similarity=0.379 Sum_probs=25.5
Q ss_pred hhCceEEecCChHHHHHHHHh---CCcEEEecC
Q 031484 53 AAADLIVSRAGAMTCYEILAT---GKPSILIPS 82 (159)
Q Consensus 53 ~~ad~~i~~~G~~t~~Eal~~---g~P~I~~p~ 82 (159)
..+|++|+-+|.+|+++++.. ++|++-++.
T Consensus 40 ~~~D~vv~~GGDGTll~~a~~~~~~~PilGIn~ 72 (258)
T 1yt5_A 40 VTADLIVVVGGDGTVLKAAKKAADGTPMVGFKA 72 (258)
T ss_dssp BCCSEEEEEECHHHHHHHHTTBCTTCEEEEEES
T ss_pred CCCCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC
Confidence 368999999999999998876 889988863
No 85
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=68.26 E-value=8.2 Score=30.39 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=23.8
Q ss_pred HHHHHhhCceEEecC-ChHHHHHHH---H---hC------CcEEEecC
Q 031484 48 MDLAYAAADLIVSRA-GAMTCYEIL---A---TG------KPSILIPS 82 (159)
Q Consensus 48 ~~~~l~~ad~~i~~~-G~~t~~Eal---~---~g------~P~I~~p~ 82 (159)
...++..||.+|.-+ |.+|+-|.+ . .| +|+++...
T Consensus 241 K~~mv~~SDAfIaLPGG~GTLEELfE~LTw~qLgtgk~h~kPIVLln~ 288 (462)
T 3gh1_A 241 LEAFVRMAHGIIIFPGGPGTAEELLYILGIMMHPENADQPMPIVLTGP 288 (462)
T ss_dssp HHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEEC
T ss_pred HHHHHHHCCEEEEcCCCcchHHHHHHHHHHHhcccCcCCCCCEEEEcC
Confidence 445568999988755 568866643 2 13 89999853
No 86
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=66.32 E-value=30 Score=26.35 Aligned_cols=77 Identities=10% Similarity=0.085 Sum_probs=41.3
Q ss_pred HHHhhcCCeeEEEEcCcc-----cHHHHHHHhhcCC-CeEEec-cc--c------cHHHHH--hhCceEEecCChHHHHH
Q 031484 7 QMLMEKHNLFIIWQTGVE-----AFNEMESLVRNHP-RLLLTP-FL--H------SMDLAY--AAADLIVSRAGAMTCYE 69 (159)
Q Consensus 7 ~~~~~~~~~~~~~~~G~~-----~~~~l~~~~~~~~-~v~~~~-~~--~------~~~~~l--~~ad~~i~~~G~~t~~E 69 (159)
+.++.+..-++++++|+. ..+++.+.++... .+.+++ .. | +..+.+ ..+|++|+=+|+ +++.
T Consensus 24 ~~~~~~g~~~~liVtd~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGG-sv~D 102 (383)
T 3ox4_A 24 KDLNGSGFKNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGG-SPHD 102 (383)
T ss_dssp HTTTTSCCCEEEEEEEHHHHHTTHHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHHHHHHHHTCSEEEEEESH-HHHH
T ss_pred HHHHHcCCCEEEEEECCchhhCchHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCCc-HHHH
Confidence 344444434688888874 2345555444322 233332 11 1 223333 368999987664 3333
Q ss_pred H-----HHh------------------CCcEEEecCCC
Q 031484 70 I-----LAT------------------GKPSILIPSPN 84 (159)
Q Consensus 70 a-----l~~------------------g~P~I~~p~~~ 84 (159)
+ +.+ ++|+|.+|..-
T Consensus 103 ~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa 140 (383)
T 3ox4_A 103 CAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTA 140 (383)
T ss_dssp HHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSS
T ss_pred HHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCC
Confidence 2 223 89999999864
No 87
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=66.03 E-value=8.8 Score=27.19 Aligned_cols=67 Identities=18% Similarity=0.206 Sum_probs=39.0
Q ss_pred eEEEEcCcccHHHHHHH-hhcC---CCeEEec--ccc---cHHHHHh--hCceEEecCChHHHHHHHHhCCcEEEecCC
Q 031484 16 FIIWQTGVEAFNEMESL-VRNH---PRLLLTP--FLH---SMDLAYA--AADLIVSRAGAMTCYEILATGKPSILIPSP 83 (159)
Q Consensus 16 ~~~~~~G~~~~~~l~~~-~~~~---~~v~~~~--~~~---~~~~~l~--~ad~~i~~~G~~t~~Eal~~g~P~I~~p~~ 83 (159)
.++|+.+.....++.+. .... ..+.+.. +.. ...+++. .+|++||++|+...+... ..+|+|-++..
T Consensus 14 ~ii~i~~~~~L~~~~~~i~~e~~~~~~I~vi~~~le~av~~a~~~~~~~~~dVIISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 14 PVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp CEEEEECCHHHHHHHHHHHTTTTTTCEEEEECCCHHHHHHHHHHHTTTSCCSEEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CEEEEEchHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHHHhcCCCeEEEeCChHHHHHHhh-CCCCEEEecCC
Confidence 56666776543333332 3221 2455532 222 1223343 499999998877666653 68999999875
No 88
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=66.01 E-value=6.1 Score=30.24 Aligned_cols=30 Identities=17% Similarity=0.152 Sum_probs=24.8
Q ss_pred hhCceEEecCChHHHHHHHH----hCCcEEEecC
Q 031484 53 AAADLIVSRAGAMTCYEILA----TGKPSILIPS 82 (159)
Q Consensus 53 ~~ad~~i~~~G~~t~~Eal~----~g~P~I~~p~ 82 (159)
..+|++|+-+|.+|++.++. .+.|++-+..
T Consensus 107 ~~~DlvI~lGGDGT~L~aa~~~~~~~~PvlGiN~ 140 (365)
T 3pfn_A 107 NQIDFIICLGGDGTLLYASSLFQGSVPPVMAFHL 140 (365)
T ss_dssp TTCSEEEEESSTTHHHHHHHHCSSSCCCEEEEES
T ss_pred cCCCEEEEEcChHHHHHHHHHhccCCCCEEEEcC
Confidence 57899999999999999876 3589998754
No 89
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=65.43 E-value=4.8 Score=29.82 Aligned_cols=31 Identities=13% Similarity=0.135 Sum_probs=24.0
Q ss_pred HhhCceEEecCChHHHHHHHHh----CCcEEEecC
Q 031484 52 YAAADLIVSRAGAMTCYEILAT----GKPSILIPS 82 (159)
Q Consensus 52 l~~ad~~i~~~G~~t~~Eal~~----g~P~I~~p~ 82 (159)
-..+|++|+-+|.+|+++++.. ++|++-++.
T Consensus 73 ~~~~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 73 ADGCELVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ---CCCEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ccCCCEEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3568999999999999998753 899998864
No 90
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=63.50 E-value=23 Score=21.78 Aligned_cols=107 Identities=12% Similarity=0.165 Sum_probs=54.8
Q ss_pred eeEEEEcCccc-HHHHHHHhhcCC-CeEEecccccHHHHHh----hCceEEecC---C--hHHHHHHH---HhCCcEEEe
Q 031484 15 LFIIWQTGVEA-FNEMESLVRNHP-RLLLTPFLHSMDLAYA----AADLIVSRA---G--AMTCYEIL---ATGKPSILI 80 (159)
Q Consensus 15 ~~~~~~~G~~~-~~~l~~~~~~~~-~v~~~~~~~~~~~~l~----~ad~~i~~~---G--~~t~~Eal---~~g~P~I~~ 80 (159)
.+++++..... ...+...+...+ .+.......+....+. ..|++|... + +..+++.+ ...+|+|++
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~l 83 (143)
T 3jte_A 4 AKILVIDDESTILQNIKFLLEIDGNEVLTASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIIL 83 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEE
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEE
Confidence 46666655432 455555554322 2332222234444444 568887532 2 22233333 246888887
Q ss_pred cCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhcCHH
Q 031484 81 PSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILGNEA 128 (159)
Q Consensus 81 p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~~~ 128 (159)
... .. ........+.|. +++..+ .+.+.+...+..++....
T Consensus 84 s~~----~~-~~~~~~~~~~g~~~~l~kp--~~~~~l~~~l~~~~~~~~ 125 (143)
T 3jte_A 84 TGH----GD-LDNAILAMKEGAFEYLRKP--VTAQDLSIAINNAINRKK 125 (143)
T ss_dssp ECT----TC-HHHHHHHHHTTCSEEEESS--CCHHHHHHHHHHHHHHHH
T ss_pred ECC----CC-HHHHHHHHHhCcceeEeCC--CCHHHHHHHHHHHHHHHH
Confidence 432 12 122223344454 555554 448999999998876443
No 91
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=61.82 E-value=12 Score=29.57 Aligned_cols=34 Identities=32% Similarity=0.291 Sum_probs=24.2
Q ss_pred HHHHHhhCceEEec-CChHHHHHH---HH---------hCCcEEEec
Q 031484 48 MDLAYAAADLIVSR-AGAMTCYEI---LA---------TGKPSILIP 81 (159)
Q Consensus 48 ~~~~l~~ad~~i~~-~G~~t~~Ea---l~---------~g~P~I~~p 81 (159)
...++..||++|.- +|.+|+-|. +. .++|+++..
T Consensus 239 K~~mv~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg 285 (460)
T 3bq9_A 239 LEAFVRCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILTG 285 (460)
T ss_dssp HHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEE
T ss_pred HHHHHHhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEEe
Confidence 44556799998864 457887664 33 489999983
No 92
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=61.75 E-value=45 Score=26.99 Aligned_cols=76 Identities=16% Similarity=0.196 Sum_probs=43.5
Q ss_pred hhHHHHHhhcCCeeEEE-EcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhhCc-----eEEecCCh------H
Q 031484 3 NLYYQMLMEKHNLFIIW-QTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAAAD-----LIVSRAGA------M 65 (159)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~ad-----~~i~~~G~------~ 65 (159)
+.+.+.|.. .+++.++ +-|.....-+..+.+ .+.++++...++ +.+-|+.+. ++++++|+ +
T Consensus 31 ~~l~~~L~~-~GV~~vfg~PG~~~~~l~~al~~-~~~i~~i~~~~E~~Aa~~A~GyAr~tgg~~~v~~~TsGpG~~N~~~ 108 (616)
T 2pan_A 31 DAAMYVLEK-EGITTAFGVPGAAINPFYSAMRK-HGGIRHILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMIT 108 (616)
T ss_dssp HHHHHHHHH-TTCCEEEECCCGGGHHHHHHHHH-HCCCEEEECSSHHHHHHHHHHHHHHSTTCCEEEEECSTHHHHTSHH
T ss_pred HHHHHHHHH-CCCCEEEECCCCccHHHHHHHHh-cCCCcEEeeCCHHHHHHHHHHHHHhcCCCceEEEeCCCchHHHHHH
Confidence 345555655 3555444 334333333333222 245776655543 555555443 45677885 4
Q ss_pred HHHHHHHhCCcEEEe
Q 031484 66 TCYEILATGKPSILI 80 (159)
Q Consensus 66 t~~Eal~~g~P~I~~ 80 (159)
.+.||..-++|+|++
T Consensus 109 ~l~~A~~~~vPlvvI 123 (616)
T 2pan_A 109 ALYSASADSIPILCI 123 (616)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHhcCCCEEEE
Confidence 589999999999987
No 93
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=61.22 E-value=14 Score=22.86 Aligned_cols=70 Identities=10% Similarity=-0.039 Sum_probs=40.4
Q ss_pred CCeeEEEEcCccc-----HHHHHHHhhcCC-CeEEecc-cccHHHHHhhCceEEecCC----hHHHHHHH-HhCCcEEEe
Q 031484 13 HNLFIIWQTGVEA-----FNEMESLVRNHP-RLLLTPF-LHSMDLAYAAADLIVSRAG----AMTCYEIL-ATGKPSILI 80 (159)
Q Consensus 13 ~~~~~~~~~G~~~-----~~~l~~~~~~~~-~v~~~~~-~~~~~~~l~~ad~~i~~~G----~~t~~Eal-~~g~P~I~~ 80 (159)
...+++++|+.+- -..+++.++..+ .+.+... ..+..+.+...|+++..+- ...+-+.. ..|+|+.++
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ipV~vI 84 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVAT 84 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCEEEEC
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCcEEEe
Confidence 4568888898752 244444443222 4555332 1346667788999998443 12232322 248999998
Q ss_pred cC
Q 031484 81 PS 82 (159)
Q Consensus 81 p~ 82 (159)
|.
T Consensus 85 ~~ 86 (108)
T 3nbm_A 85 RG 86 (108)
T ss_dssp CH
T ss_pred CH
Confidence 63
No 94
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=60.84 E-value=49 Score=24.65 Aligned_cols=74 Identities=9% Similarity=0.126 Sum_probs=43.3
Q ss_pred HHHHHhhcCCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhhC--ceEEecCC----hHHHHHHHHhCCcEE
Q 031484 5 YYQMLMEKHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAAA--DLIVSRAG----AMTCYEILATGKPSI 78 (159)
Q Consensus 5 ~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~a--d~~i~~~G----~~t~~Eal~~g~P~I 78 (159)
+...+...++++++.++... .+..++..+..+....+ .+..+++... |+++-..- .-.+.+++..|++++
T Consensus 21 ~~~~l~~~~~~~l~av~d~~-~~~~~~~a~~~~~~~~~---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl 96 (359)
T 3m2t_A 21 LLPSLLQMQDIRIVAACDSD-LERARRVHRFISDIPVL---DNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVF 96 (359)
T ss_dssp HHHHHHTCTTEEEEEEECSS-HHHHGGGGGTSCSCCEE---SSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhCCCcEEEEEEcCC-HHHHHHHHHhcCCCccc---CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEE
Confidence 34455667888887777764 23333322222333333 4567778765 77764332 233578999999988
Q ss_pred Ee-cC
Q 031484 79 LI-PS 82 (159)
Q Consensus 79 ~~-p~ 82 (159)
+= |.
T Consensus 97 ~EKPl 101 (359)
T 3m2t_A 97 VEKPP 101 (359)
T ss_dssp ECSCS
T ss_pred EECCC
Confidence 73 44
No 95
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=60.78 E-value=54 Score=25.06 Aligned_cols=80 Identities=13% Similarity=0.140 Sum_probs=43.4
Q ss_pred hHHHHHhhcCCeeEEEEcCcccHHHHHH----HhhcCCCeEE--ecccc--------cHHHHH--hhCceEEecCChHHH
Q 031484 4 LYYQMLMEKHNLFIIWQTGVEAFNEMES----LVRNHPRLLL--TPFLH--------SMDLAY--AAADLIVSRAGAMTC 67 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~G~~~~~~l~~----~~~~~~~v~~--~~~~~--------~~~~~l--~~ad~~i~~~G~~t~ 67 (159)
.+.+.++... -++++++++...+...+ .++. ++.+ ..+.+ +..+.+ ..+|++|+-+|+. +
T Consensus 43 ~l~~~l~~~g-~r~liVtd~~~~~~~~~~v~~~L~~--g~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGs-~ 118 (387)
T 3uhj_A 43 KLAAYLAPLG-KRALVLIDRVLFDALSERIGKSCGD--SLDIRFERFGGECCTSEIERVRKVAIEHGSDILVGVGGGK-T 118 (387)
T ss_dssp TTHHHHGGGC-SEEEEEECTTTHHHHHHHC--------CCEEEEEECCSSCSHHHHHHHHHHHHHHTCSEEEEESSHH-H
T ss_pred HHHHHHHHcC-CEEEEEECchHHHHHHHHHHHHHHc--CCCeEEEEcCCCCCHHHHHHHHHHHhhcCCCEEEEeCCcH-H
Confidence 3455566654 47888889864332222 2222 3432 22221 122333 3689999976643 3
Q ss_pred HH-----HHHhCCcEEEecCCCCCC
Q 031484 68 YE-----ILATGKPSILIPSPNVAE 87 (159)
Q Consensus 68 ~E-----al~~g~P~I~~p~~~~~~ 87 (159)
+. +...|+|+|.+|....++
T Consensus 119 ~D~AK~iA~~~~~p~i~IPTTagtg 143 (387)
T 3uhj_A 119 ADTAKIVAIDTGARIVIAPTIASTD 143 (387)
T ss_dssp HHHHHHHHHHTTCEEEECCSSCCCS
T ss_pred HHHHHHHHHhcCCCEEEecCcccCC
Confidence 44 245799999999864333
No 96
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=60.13 E-value=25 Score=21.56 Aligned_cols=48 Identities=10% Similarity=0.114 Sum_probs=29.6
Q ss_pred eEEEEcCccc-----HHHHHHHhhcCC-CeEEeccc-ccHHHHHhhCceEEecCC
Q 031484 16 FIIWQTGVEA-----FNEMESLVRNHP-RLLLTPFL-HSMDLAYAAADLIVSRAG 63 (159)
Q Consensus 16 ~~~~~~G~~~-----~~~l~~~~~~~~-~v~~~~~~-~~~~~~l~~ad~~i~~~G 63 (159)
+++++||.+- -..+++.++..+ .+.+.... .+..+.+..+|++++.+-
T Consensus 5 kIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~~~~~~~~~~~~Dvil~~pq 59 (106)
T 1e2b_A 5 HIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQ 59 (106)
T ss_dssp EEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEECSSSTTHHHHHCSEEEECTT
T ss_pred EEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEecHHHHHhhccCCCEEEEccc
Confidence 6888999851 235555554322 34444322 356677899999997554
No 97
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=58.34 E-value=44 Score=23.35 Aligned_cols=77 Identities=12% Similarity=0.015 Sum_probs=41.1
Q ss_pred hhHHHHHhhcCCeeEEEEcCc------ccHHHHHHHhhcCC-CeEEecccccHHHHHhhCceEEecCChH----------
Q 031484 3 NLYYQMLMEKHNLFIIWQTGV------EAFNEMESLVRNHP-RLLLTPFLHSMDLAYAAADLIVSRAGAM---------- 65 (159)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~G~------~~~~~l~~~~~~~~-~v~~~~~~~~~~~~l~~ad~~i~~~G~~---------- 65 (159)
+.+.+++...+.+-+ +-++. .+...+.+.++... .+..+...++..+.+..||.++..+|..
T Consensus 22 ~~l~~~~~~~~~i~i-I~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~~d~~~~l~~ad~I~lpGG~~~~~~~~l~~~ 100 (229)
T 1fy2_A 22 PLIANQLNGRRSAVF-IPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRVADPLAAIEKAEIIIVGGGNTFQLLKESRER 100 (229)
T ss_dssp HHHHHHHTTCCEEEE-ECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSSSCHHHHHHHCSEEEECCSCHHHHHHHHHHT
T ss_pred HHHHHHhcCCCeEEE-EECCCCCCCHHHHHHHHHHHHHHCCCEEEEEeccccHHHHHhcCCEEEECCCcHHHHHHHHHHC
Confidence 345555654333322 34442 22334444443322 2333332245558889999999877621
Q ss_pred ----HHHHHHHhCCcEEEe
Q 031484 66 ----TCYEILATGKPSILI 80 (159)
Q Consensus 66 ----t~~Eal~~g~P~I~~ 80 (159)
.+-|+...|+|++-+
T Consensus 101 gl~~~l~~~~~~G~p~~G~ 119 (229)
T 1fy2_A 101 GLLAPMADRVKRGALYIGW 119 (229)
T ss_dssp TCHHHHHHHHHTTCEEEEE
T ss_pred ChHHHHHHHHHcCCEEEEE
Confidence 244455579998866
No 98
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=57.75 E-value=9.3 Score=27.56 Aligned_cols=28 Identities=32% Similarity=0.415 Sum_probs=21.4
Q ss_pred CceEEe-------------cCCh-HHHHHHHHhCCcEEEecC
Q 031484 55 ADLIVS-------------RAGA-MTCYEILATGKPSILIPS 82 (159)
Q Consensus 55 ad~~i~-------------~~G~-~t~~Eal~~g~P~I~~p~ 82 (159)
=|+||| .||+ +..+|+..+|+|.|++..
T Consensus 86 PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 86 PDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp CSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 389986 3453 347899999999999754
No 99
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=57.73 E-value=16 Score=25.66 Aligned_cols=32 Identities=28% Similarity=0.137 Sum_probs=22.3
Q ss_pred HHHhhCceEEe-cCChHHHHH---HHH-------hCCcEEEec
Q 031484 50 LAYAAADLIVS-RAGAMTCYE---ILA-------TGKPSILIP 81 (159)
Q Consensus 50 ~~l~~ad~~i~-~~G~~t~~E---al~-------~g~P~I~~p 81 (159)
.+...||.+|. .+|.+|+-| ++. .++|+++..
T Consensus 127 ~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~ 169 (217)
T 1wek_A 127 LFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLD 169 (217)
T ss_dssp HHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEEC
T ss_pred HHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeC
Confidence 45578999886 455788666 443 369999884
No 100
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=56.62 E-value=5.8 Score=24.89 Aligned_cols=96 Identities=14% Similarity=0.178 Sum_probs=55.0
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCChHH---------HHHHHHhCCcEEEecCC
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMT---------CYEILATGKPSILIPSP 83 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t---------~~Eal~~g~P~I~~p~~ 83 (159)
.+++.+.-+..+ ++.|..++. .+++.+.+ .-|..||++|.-+|..| +-.|--.|+|+|.+.-.
T Consensus 4 ~~~lFISh~~~d~~~~L~~~l~-~~~f~~~~------~~I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~ 76 (111)
T 1eiw_A 4 EIRLYITEGEVEDYRVFLERLE-QSGLEWRP------ATPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPY 76 (111)
T ss_dssp CEEEEECCCCSHHHHHHHHHHH-HHCSCEEE------CCSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCS
T ss_pred eEEEEEecccHhHHHHHHHHHh-CCCCeeec------CccccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcC
Confidence 345655555544 566666554 44555554 44789999997777433 34466799999998432
Q ss_pred CCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhc
Q 031484 84 NVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 84 ~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
+ .. . ....+.+.+.-++ .++.+.+.++|...++
T Consensus 77 g-~~-~---~P~~l~~~a~~iV----~Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 77 G-LE-N---VPPELEAVSSEVV----GWNPHCIRDALEDALD 109 (111)
T ss_dssp S-SS-C---CCTTHHHHCSEEE----CSCHHHHHHHHHHHHC
T ss_pred C-CC-c---CCHHHHhhCceec----cCCHHHHHHHHHhccC
Confidence 1 11 0 1122443333322 1337888888877653
No 101
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=55.40 E-value=72 Score=25.63 Aligned_cols=76 Identities=14% Similarity=0.227 Sum_probs=43.3
Q ss_pred hhHHHHHhhcCCeeEEE-EcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhhC----ceEEecCCh------HH
Q 031484 3 NLYYQMLMEKHNLFIIW-QTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAAA----DLIVSRAGA------MT 66 (159)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~a----d~~i~~~G~------~t 66 (159)
+.+.+.|... +++.++ +-|.....-+..+.+ .+.++++...+| +.+-|+.+ -++++++|+ +.
T Consensus 16 ~~l~~~L~~~-GV~~vfg~PG~~~~~l~~al~~-~~~i~~i~~~~E~~Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~g 93 (590)
T 1ybh_A 16 DILVEALERQ-GVETVFAYPGGASMEIHQALTR-SSSIRNVLPRHEQGGVFAAEGYARSSGKPGICIATSGPGATNLVSG 93 (590)
T ss_dssp HHHHHHHHTT-TCCEEEECCCGGGHHHHHHHHH-CSSCEECCCSSHHHHHHHHHHHHHHHSSCEEEEECTTHHHHTTHHH
T ss_pred HHHHHHHHHc-CCCEEEEcCCCchHHHHHHHhc-cCCccEEeeCCHHHHHHHHHHHHHHHCCCEEEEeccCchHHHHHHH
Confidence 3445555553 444433 444433333333322 356777766553 44444333 356777883 34
Q ss_pred HHHHHHhCCcEEEe
Q 031484 67 CYEILATGKPSILI 80 (159)
Q Consensus 67 ~~Eal~~g~P~I~~ 80 (159)
+.||..-++|+|++
T Consensus 94 v~~A~~~~vPll~i 107 (590)
T 1ybh_A 94 LADALLDSVPLVAI 107 (590)
T ss_dssp HHHHHHHTCCEEEE
T ss_pred HHHHHhhCCCEEEE
Confidence 88999999999987
No 102
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=53.43 E-value=16 Score=26.30 Aligned_cols=41 Identities=20% Similarity=0.292 Sum_probs=27.4
Q ss_pred ChHHHHHHH-HhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeecc
Q 031484 63 GAMTCYEIL-ATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITE 108 (159)
Q Consensus 63 G~~t~~Eal-~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~ 108 (159)
|+...-|.+ +.|+|.|++... ......+.+.+.|.|+++-.
T Consensus 79 GP~~ARE~l~~~~iP~IvI~D~-----p~~K~kd~l~~~g~GYIivk 120 (283)
T 1qv9_A 79 GPSKAREMLADSEYPAVIIGDA-----PGLKVKDEMEEQGLGYILVK 120 (283)
T ss_dssp HHHHHHHHHHTSSSCEEEEEEG-----GGGGGHHHHHHTTCEEEEET
T ss_pred CchHHHHHHHhCCCCEEEEcCC-----cchhhHHHHHhcCCcEEEEe
Confidence 555566755 599999998432 21223467889999988643
No 103
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=53.02 E-value=37 Score=20.76 Aligned_cols=109 Identities=10% Similarity=0.092 Sum_probs=54.2
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcCCCeEEeccc--ccHHHHHh---hCceEEec---C-C--hHHHHHHH-----HhCCc
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNHPRLLLTPFL--HSMDLAYA---AADLIVSR---A-G--AMTCYEIL-----ATGKP 76 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~--~~~~~~l~---~ad~~i~~---~-G--~~t~~Eal-----~~g~P 76 (159)
..+++++-.... ...++..+....++.+..+. .+..+.+. ..|++|.. + + +..+++.+ ...+|
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~~~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ 83 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIGEYDFIEVENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTP 83 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHCCCEEEEECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhccCccEEEECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCC
Confidence 346666555432 44555555431344444222 23333333 36788753 3 2 22233333 34789
Q ss_pred EEEecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhcCHHH
Q 031484 77 SILIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILGNEAL 129 (159)
Q Consensus 77 ~I~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~~~~ 129 (159)
+|++... .... ......+.|. +++.++ .+.+.|.+.+..++....+
T Consensus 84 ii~ls~~----~~~~-~~~~~~~~g~~~~l~KP--~~~~~l~~~i~~~~~~~~~ 130 (140)
T 3lua_A 84 VIIATKS----DNPG-YRHAALKFKVSDYILKP--YPTKRLENSVRSVLKICQR 130 (140)
T ss_dssp EEEEESC----CCHH-HHHHHHHSCCSEEEESS--CCTTHHHHHHHHHHCC---
T ss_pred EEEEeCC----CCHH-HHHHHHHcCCCEEEECC--CCHHHHHHHHHHHHHhccc
Confidence 9987432 1212 2223334554 555554 3478999999998875543
No 104
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=52.78 E-value=22 Score=27.41 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=24.9
Q ss_pred cHHHHHhhCceEEecCC-----------hHHHHH-HHHhCCcEEEe
Q 031484 47 SMDLAYAAADLIVSRAG-----------AMTCYE-ILATGKPSILI 80 (159)
Q Consensus 47 ~~~~~l~~ad~~i~~~G-----------~~t~~E-al~~g~P~I~~ 80 (159)
.+.+.++.||++|+--| +..+.. +-.+++|+|++
T Consensus 280 ~l~~~l~~ADLVITGEG~~D~Qtl~GK~p~gVa~~A~~~~vPviai 325 (383)
T 3cwc_A 280 HLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGI 325 (383)
T ss_dssp THHHHHHHCSEEEECCEESCC----CHHHHHHHHHHHHTTCCEEEE
T ss_pred ChHhhhcCCCEEEECCCCCcCcCCCCcHHHHHHHHHHHhCCCEEEE
Confidence 58899999999998333 223444 55679999987
No 105
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=51.75 E-value=84 Score=24.53 Aligned_cols=83 Identities=12% Similarity=0.146 Sum_probs=43.1
Q ss_pred hHHHHHhhcCCeeEEEEcCccc----HHHHHHHhhcCC-Ce--EEecccc---cHHHHHh----hCceEEecCChHHHHH
Q 031484 4 LYYQMLMEKHNLFIIWQTGVEA----FNEMESLVRNHP-RL--LLTPFLH---SMDLAYA----AADLIVSRAGAMTCYE 69 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~G~~~----~~~l~~~~~~~~-~v--~~~~~~~---~~~~~l~----~ad~~i~~~G~~t~~E 69 (159)
.+.+.++....-++++++++.. .+++.+.++... .+ .+++-.+ .+.+... .+|++|+=+|+ +++.
T Consensus 81 ~l~~~l~~~g~~rvlIVtd~~~~~~~~~~v~~~L~~~gi~~~~~~~~ge~~~~~v~~~~~~~~~~~D~IIAvGGG-SviD 159 (450)
T 1ta9_A 81 RSYMYVKKWATKSAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCPDDTQVIIGVGGG-KTMD 159 (450)
T ss_dssp GHHHHHTTTCSSEEEEEEEHHHHHHTHHHHHHHHHHTTCEEEEEEECSCCCHHHHHHHHTTSCTTCCEEEEEESH-HHHH
T ss_pred HHHHHHHhcCCCEEEEEECccHHHHHHHHHHHHHHHCCCeEEEEeeCCCCCHHHHHHHHHHHhhCCCEEEEeCCc-HHHH
Confidence 3445555543227888888742 344444443221 22 1221111 2233322 67999986664 3334
Q ss_pred -----HHHhCCcEEEecCCCCCC
Q 031484 70 -----ILATGKPSILIPSPNVAE 87 (159)
Q Consensus 70 -----al~~g~P~I~~p~~~~~~ 87 (159)
+...|+|+|.+|....++
T Consensus 160 ~AK~iA~~~giP~I~IPTTAgtg 182 (450)
T 1ta9_A 160 SAKYIAHSMNLPSIICPTTASSD 182 (450)
T ss_dssp HHHHHHHHTTCCEEEEESSCSCS
T ss_pred HHHHHHHhcCCCEEEEeCCCccC
Confidence 234699999999864444
No 106
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=50.49 E-value=41 Score=20.56 Aligned_cols=55 Identities=9% Similarity=0.015 Sum_probs=29.3
Q ss_pred HhhcCCeeEEEEcCccc------HHHHHHHhhcCC-C-eEEeccc-ccHHHHHhhCceEEecCC
Q 031484 9 LMEKHNLFIIWQTGVEA------FNEMESLVRNHP-R-LLLTPFL-HSMDLAYAAADLIVSRAG 63 (159)
Q Consensus 9 ~~~~~~~~~~~~~G~~~------~~~l~~~~~~~~-~-v~~~~~~-~~~~~~l~~ad~~i~~~G 63 (159)
+.+....+++++||.+- ...+++.+.... . +.+.... .++...+..+|++|+..-
T Consensus 13 ~~~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~~~~~~~~~~~~DlIi~t~~ 76 (110)
T 3czc_A 13 MGRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGEAKGLASNYDIVVASNH 76 (110)
T ss_dssp -----CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECHHHHHHHGGGCSEEEEETT
T ss_pred ccccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEeeHHHHhhccCCCcEEEECCc
Confidence 33444567889999861 235555554321 2 3333221 356666789999998554
No 107
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=50.18 E-value=90 Score=25.16 Aligned_cols=75 Identities=13% Similarity=0.147 Sum_probs=42.2
Q ss_pred hHHHHHhhcCCeeEEE-EcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhh----CceEEecCCh------HHH
Q 031484 4 LYYQMLMEKHNLFIIW-QTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAA----ADLIVSRAGA------MTC 67 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~----ad~~i~~~G~------~t~ 67 (159)
.+.+.|... +++.++ +-|.....-+..+.+ .+.++++...++ +.+-|+. --++++++|+ +.+
T Consensus 36 ~lv~~L~~~-GV~~vFg~PG~~~~~l~dal~~-~~~i~~i~~~hE~~Aa~aA~GyAr~tgkpgv~~~TsGpG~~N~~~gi 113 (604)
T 2x7j_A 36 SFIDEFALS-GITDAVVCPGSRSTPLAVLCAA-HPDISVHVQIDERSAGFFALGLAKAKQRPVLLICTSGTAAANFYPAV 113 (604)
T ss_dssp HHHHHHHHH-TCCEEEECCCSTTHHHHHHHHH-CTTCEEEECSSHHHHHHHHHHHHHHHTSCEEEEECSSHHHHTTHHHH
T ss_pred HHHHHHHHc-CCCEEEECcCcccHHHHHHHHh-CCCceEEEecChHHHHHHHHHHHHhhCCCEEEEECChhHHHHHHHHH
Confidence 444555553 344333 334433333333222 356776665543 4444432 3367778884 458
Q ss_pred HHHHHhCCcEEEe
Q 031484 68 YEILATGKPSILI 80 (159)
Q Consensus 68 ~Eal~~g~P~I~~ 80 (159)
.||..-++|+|++
T Consensus 114 a~A~~~~vPlv~I 126 (604)
T 2x7j_A 114 VEAHYSRVPIIVL 126 (604)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHhhcCCCEEEE
Confidence 8999999999997
No 108
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=50.15 E-value=86 Score=24.90 Aligned_cols=75 Identities=17% Similarity=0.069 Sum_probs=41.4
Q ss_pred hHHHHHhhcCCeeEE-EEcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHh----hCceEEecCCh------HHH
Q 031484 4 LYYQMLMEKHNLFII-WQTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYA----AADLIVSRAGA------MTC 67 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~-~~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~----~ad~~i~~~G~------~t~ 67 (159)
.+.+.|... +++-+ .+-|.....-+..+.+ .++++++...+| +.+-|+ ..-++++++|+ +.+
T Consensus 8 ~l~~~L~~~-GV~~vfg~PG~~~~~l~dal~~-~~~i~~i~~~~E~~Aa~~A~GyAr~tg~~~v~~~TsGpG~~N~~~gi 85 (549)
T 3eya_A 8 YIAKTLESA-GVKRIWGVTGDSLNGLSDSLNR-MGTIEWMSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGL 85 (549)
T ss_dssp HHHHHHHHT-TCCEEEECCCGGGHHHHHHHHH-HCSSEEEECSSHHHHHHHHHHHHHHHSSCEEEEECTTHHHHTTHHHH
T ss_pred HHHHHHHHC-CCCEEEEcCCCchHHHHHHHHh-cCCCeEEEeCChHHHHHHHHHHHHHhCCCEEEEeCCCCcHhhhHHHH
Confidence 444555553 44433 3444433332233222 246776665543 333332 23456778884 358
Q ss_pred HHHHHhCCcEEEe
Q 031484 68 YEILATGKPSILI 80 (159)
Q Consensus 68 ~Eal~~g~P~I~~ 80 (159)
.||..-++|+|++
T Consensus 86 ~~A~~~~vPvl~i 98 (549)
T 3eya_A 86 FDCHRNHVPVLAI 98 (549)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHhhCCCEEEE
Confidence 8999999999987
No 109
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=50.08 E-value=15 Score=26.47 Aligned_cols=29 Identities=41% Similarity=0.445 Sum_probs=22.0
Q ss_pred hCceEEe-------------cCCh-HHHHHHHHhCCcEEEecC
Q 031484 54 AADLIVS-------------RAGA-MTCYEILATGKPSILIPS 82 (159)
Q Consensus 54 ~ad~~i~-------------~~G~-~t~~Eal~~g~P~I~~p~ 82 (159)
.-|++|| .||+ +..+|+..+|+|.|++..
T Consensus 86 ~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 86 RVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp CCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 5689986 3443 346899999999999855
No 110
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=50.04 E-value=96 Score=24.72 Aligned_cols=76 Identities=17% Similarity=0.096 Sum_probs=42.2
Q ss_pred hhHHHHHhhcCCeeEEE-EcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhh---CceEEecCCh------HHH
Q 031484 3 NLYYQMLMEKHNLFIIW-QTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAA---ADLIVSRAGA------MTC 67 (159)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~---ad~~i~~~G~------~t~ 67 (159)
+.+.+.|... +++.++ +-|.....-+..+. ..+.++++...+| +.+-|+. --++++++|+ +.+
T Consensus 7 ~~l~~~L~~~-GV~~vfg~PG~~~~~l~~al~-~~~~i~~i~~~~E~~Aa~~A~Gyar~tg~~v~~~TsGpG~~N~~~gi 84 (568)
T 2wvg_A 7 TYLAERLVQI-GLKHHFAVAGDYNLVLLDNLL-LNKNMEQVYCCNELNCGFSAEGYARAKGAAAAVVTYSVGALSAFDAI 84 (568)
T ss_dssp HHHHHHHHHT-TCSEEEECCCTTTHHHHHHHH-TCTTSEEEECSSHHHHHHHHHHHHHHHSCEEEEECTTTTHHHHHHHH
T ss_pred HHHHHHHHHc-CCCEEEeCCCCccHHHHHHHh-ccCCceEeccCcHHHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHHH
Confidence 3445555553 444333 34443333333332 2346776665543 4443332 2346677774 458
Q ss_pred HHHHHhCCcEEEe
Q 031484 68 YEILATGKPSILI 80 (159)
Q Consensus 68 ~Eal~~g~P~I~~ 80 (159)
.||..-++|+|++
T Consensus 85 a~A~~~~vPll~i 97 (568)
T 2wvg_A 85 GGAYAENLPVILI 97 (568)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHhhhCCCEEEE
Confidence 8999999999987
No 111
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=49.63 E-value=47 Score=21.04 Aligned_cols=107 Identities=13% Similarity=0.149 Sum_probs=55.6
Q ss_pred cCCeeEEEEcCccc-HHHHHHHhhcCC--CeEEecccccHHHHHh--hCceEEe---cCC--hHHHHHHHH-----hCCc
Q 031484 12 KHNLFIIWQTGVEA-FNEMESLVRNHP--RLLLTPFLHSMDLAYA--AADLIVS---RAG--AMTCYEILA-----TGKP 76 (159)
Q Consensus 12 ~~~~~~~~~~G~~~-~~~l~~~~~~~~--~v~~~~~~~~~~~~l~--~ad~~i~---~~G--~~t~~Eal~-----~g~P 76 (159)
+.+.+++++--... ..-++..++..+ .+.....-.+-.+.+. .-|++++ .+| |..+++.+- ..+|
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ip 89 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLP 89 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCC
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCe
Confidence 34677877655432 344444444322 2322211112333333 4688885 333 334445443 4689
Q ss_pred EEEecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhc
Q 031484 77 SILIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 77 ~I~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
+|++.-. .... ......+.|. +++.++ ++++.|.+.+.++++
T Consensus 90 vI~lTa~----~~~~-~~~~~~~~Ga~~yl~KP--~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 90 VLMITAE----AKRE-QIIEAAQAGVNGYIVKP--FTAATLKEKLDKIFE 132 (134)
T ss_dssp EEEEESS----CCHH-HHHHHHHTTCCEEEESS--CCHHHHHHHHHHHCC
T ss_pred EEEEECC----CCHH-HHHHHHHCCCCEEEECC--CCHHHHHHHHHHHHh
Confidence 9987432 2222 2233344555 566654 458999999988764
No 112
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=49.43 E-value=71 Score=23.02 Aligned_cols=74 Identities=15% Similarity=0.169 Sum_probs=42.3
Q ss_pred HHHHHhhcCCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhhCceEEecCC----hHHHHHHHHhCCcEEEe
Q 031484 5 YYQMLMEKHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSRAG----AMTCYEILATGKPSILI 80 (159)
Q Consensus 5 ~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G----~~t~~Eal~~g~P~I~~ 80 (159)
+...+.+.++++++.++.... +..++..+.. ++.. | .+..+++...|+++...- ...+.+++..|+++++=
T Consensus 22 ~~~~l~~~~~~~l~av~d~~~-~~~~~~a~~~-~~~~--~-~~~~~ll~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~E 96 (308)
T 3uuw_A 22 YLPILTKSERFEFVGAFTPNK-VKREKICSDY-RIMP--F-DSIESLAKKCDCIFLHSSTETHYEIIKILLNLGVHVYVD 96 (308)
T ss_dssp THHHHTSCSSSEEEEEECSCH-HHHHHHHHHH-TCCB--C-SCHHHHHTTCSEEEECCCGGGHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHhCCCeEEEEEECCCH-HHHHHHHHHc-CCCC--c-CCHHHHHhcCCEEEEeCCcHhHHHHHHHHHHCCCcEEEc
Confidence 445566678888876766642 2222222111 2222 2 346677778999874322 23356789999998863
Q ss_pred -cCC
Q 031484 81 -PSP 83 (159)
Q Consensus 81 -p~~ 83 (159)
|..
T Consensus 97 KP~~ 100 (308)
T 3uuw_A 97 KPLA 100 (308)
T ss_dssp SSSS
T ss_pred CCCC
Confidence 553
No 113
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=49.36 E-value=53 Score=25.25 Aligned_cols=53 Identities=15% Similarity=0.243 Sum_probs=32.4
Q ss_pred cCCh-HHHHHHHHhCCcEEEecCCCCCCch-HHHHHHHHHHcCceeeeccCCCChhHHHHHHH
Q 031484 61 RAGA-MTCYEILATGKPSILIPSPNVAEGH-QFKNASLMAKLADSRIITEDELDSITLETTIE 121 (159)
Q Consensus 61 ~~G~-~t~~Eal~~g~P~I~~p~~~~~~~~-q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~ 121 (159)
+||+ .|.-.|+-+|+||.++|-. +.+. ..++ ..+.+.|+.. +.. .+++.+.+.
T Consensus 248 kSGsliTA~~Ale~gR~VfavPG~--i~~~~s~G~-n~LI~~GA~l-v~~----~~Dil~~l~ 302 (382)
T 3maj_A 248 RSGSLITARRAADQGREVFAVPGS--PLDPRAAGT-NDLIKQGATL-ITS----ASDIVEAVA 302 (382)
T ss_dssp TCTHHHHHHHHHHHTCCEEECCCC--TTCGGGHHH-HHHHHTTCEE-CSS----HHHHHHHHT
T ss_pred CCcHHHHHHHHHHhCCcEEEEcCC--CCCcccccH-HHHHHCCCEE-ECC----HHHHHHHhh
Confidence 4564 5667799999999999854 2222 2333 3456667543 332 566666654
No 114
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=49.29 E-value=16 Score=26.45 Aligned_cols=35 Identities=26% Similarity=0.334 Sum_probs=24.1
Q ss_pred HHHHHh--hCceEEe-------------cCCh-HHHHHHHHhCCcEEEecC
Q 031484 48 MDLAYA--AADLIVS-------------RAGA-MTCYEILATGKPSILIPS 82 (159)
Q Consensus 48 ~~~~l~--~ad~~i~-------------~~G~-~t~~Eal~~g~P~I~~p~ 82 (159)
+..++. .-|++|| .||+ +..+|+..+|+|.|++..
T Consensus 77 l~~l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 77 YRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHhcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 334443 5699986 2343 336899999999998754
No 115
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=49.09 E-value=93 Score=24.79 Aligned_cols=76 Identities=17% Similarity=0.080 Sum_probs=41.9
Q ss_pred hhHHHHHhhcCCeeEEE-EcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhh---CceEEecCCh------HHH
Q 031484 3 NLYYQMLMEKHNLFIIW-QTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAA---ADLIVSRAGA------MTC 67 (159)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~---ad~~i~~~G~------~t~ 67 (159)
+.+.+.|... +++.++ +-|.....-+..+. ..++++++...+| +.+-|+. --++++++|+ +.+
T Consensus 7 ~~l~~~L~~~-GV~~vfg~PG~~~~~l~~al~-~~~~i~~v~~~~E~~Aa~~A~Gyar~tg~~v~~~TsGpG~~N~~~gi 84 (566)
T 2vbi_A 7 MYLAERLVQI-GLKHHFAVAGDYNLVLLDQLL-LNKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNAL 84 (566)
T ss_dssp HHHHHHHHHH-TCSEEEECCCTTTHHHHHHHH-TCTTSEEEECSSHHHHHHHHHHHHHHHSCEEEEECTTTTHHHHHHHH
T ss_pred HHHHHHHHHc-CCCEEEeCCCCccHHHHHHHh-cCCCCeEEeeCcHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHH
Confidence 3445555553 344333 34443333333332 2346777665543 3433332 2345677773 458
Q ss_pred HHHHHhCCcEEEe
Q 031484 68 YEILATGKPSILI 80 (159)
Q Consensus 68 ~Eal~~g~P~I~~ 80 (159)
.||...++|+|++
T Consensus 85 a~A~~~~vPll~i 97 (566)
T 2vbi_A 85 GGAYAENLPVILI 97 (566)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHhhCCCEEEE
Confidence 8999999999987
No 116
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=48.91 E-value=14 Score=26.49 Aligned_cols=29 Identities=17% Similarity=0.250 Sum_probs=21.9
Q ss_pred hCceEEe-------------cCCh-HHHHHHHHhCCcEEEecC
Q 031484 54 AADLIVS-------------RAGA-MTCYEILATGKPSILIPS 82 (159)
Q Consensus 54 ~ad~~i~-------------~~G~-~t~~Eal~~g~P~I~~p~ 82 (159)
.-|++|| .||+ +..+|+..+|+|.|++..
T Consensus 87 ~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 87 PVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp SCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 4689986 3443 346899999999999855
No 117
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=48.49 E-value=85 Score=23.67 Aligned_cols=83 Identities=8% Similarity=0.091 Sum_probs=43.3
Q ss_pred hHHHHHhhcCCeeEEEEcCcc-----cHHHHHHHhhcCC-CeEEec-ccc--------cHHHHH--hhCceEEecCChHH
Q 031484 4 LYYQMLMEKHNLFIIWQTGVE-----AFNEMESLVRNHP-RLLLTP-FLH--------SMDLAY--AAADLIVSRAGAMT 66 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~G~~-----~~~~l~~~~~~~~-~v~~~~-~~~--------~~~~~l--~~ad~~i~~~G~~t 66 (159)
.+.+.++....-++++++++. ..+++.+.++... .+.+++ ..+ +..+.+ ..+|++|+=+|+ +
T Consensus 21 ~l~~~l~~~g~~~~livtd~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGG-s 99 (386)
T 1rrm_A 21 ALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGG-S 99 (386)
T ss_dssp GHHHHHHHHTCCEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEESH-H
T ss_pred HHHHHHHHcCCCEEEEEECcchhhchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCCh-H
Confidence 344555554434788888874 2345544443221 233332 221 123333 367999986664 3
Q ss_pred HHHH-----HHh--------------------CCcEEEecCCCCCC
Q 031484 67 CYEI-----LAT--------------------GKPSILIPSPNVAE 87 (159)
Q Consensus 67 ~~Ea-----l~~--------------------g~P~I~~p~~~~~~ 87 (159)
++.+ ..+ ++|+|.+|..-.++
T Consensus 100 v~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtg 145 (386)
T 1rrm_A 100 PQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTA 145 (386)
T ss_dssp HHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCC
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCCCch
Confidence 3332 112 89999999864333
No 118
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=48.17 E-value=47 Score=20.61 Aligned_cols=109 Identities=4% Similarity=-0.038 Sum_probs=55.7
Q ss_pred cCCeeEEEEcCccc-HHHHHHHhhcCCCeEEeccc---ccHHHHH--hhCceEEec---CC--hHHHHHHHH---hCCcE
Q 031484 12 KHNLFIIWQTGVEA-FNEMESLVRNHPRLLLTPFL---HSMDLAY--AAADLIVSR---AG--AMTCYEILA---TGKPS 77 (159)
Q Consensus 12 ~~~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~---~~~~~~l--~~ad~~i~~---~G--~~t~~Eal~---~g~P~ 77 (159)
.+..+++++-.... ...+.+.+...+...+.... .+..+.+ ...|++|.. ++ +..+++.+. ..+|+
T Consensus 13 ~~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~i 92 (152)
T 3eul_A 13 PEKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRV 92 (152)
T ss_dssp -CCEEEEEECSSHHHHHHHHHHHHHHSSEEEEEEESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEE
T ss_pred CceEEEEEEcCCHHHHHHHHHHHhhCCCeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeE
Confidence 34567766655542 44555555433333333222 2333444 356888753 22 223344333 46788
Q ss_pred EEecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhcCH
Q 031484 78 ILIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILGNE 127 (159)
Q Consensus 78 I~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~~ 127 (159)
|++... .+.....+ ..+.|. +++..+- +.+.+.+.+.+++...
T Consensus 93 i~~s~~----~~~~~~~~-~~~~g~~~~l~Kp~--~~~~l~~~i~~~~~~~ 136 (152)
T 3eul_A 93 LLISAH----DEPAIVYQ-ALQQGAAGFLLKDS--TRTEIVKAVLDCAKGR 136 (152)
T ss_dssp EEEESC----CCHHHHHH-HHHTTCSEEEETTC--CHHHHHHHHHHHHHCC
T ss_pred EEEEcc----CCHHHHHH-HHHcCCCEEEecCC--CHHHHHHHHHHHHcCC
Confidence 876432 12222223 334454 5555543 4899999999887643
No 119
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=47.64 E-value=26 Score=23.13 Aligned_cols=45 Identities=13% Similarity=0.147 Sum_probs=30.5
Q ss_pred eEEEEcCcccHHHHHHHhhc--CCCeEEeccccc-HHHHHhhCceEEe
Q 031484 16 FIIWQTGVEAFNEMESLVRN--HPRLLLTPFLHS-MDLAYAAADLIVS 60 (159)
Q Consensus 16 ~~~~~~G~~~~~~l~~~~~~--~~~v~~~~~~~~-~~~~l~~ad~~i~ 60 (159)
.+++++|..++..+.+.++. ..+|.+.++.+. -..+...||-+|.
T Consensus 111 ~~vLvSgD~DF~plv~~lr~~~G~~V~v~g~~~~~s~~L~~~ad~fi~ 158 (165)
T 2qip_A 111 RVILVSGDGDFSLLVERIQQRYNKKVTVYGVPRLTSQTLIDCADNFVA 158 (165)
T ss_dssp EEEEECCCGGGHHHHHHHHHHHCCEEEEEECGGGSCHHHHHHSSEEEE
T ss_pred EEEEEECChhHHHHHHHHHHHcCcEEEEEeCCCcChHHHHHhCCEEEe
Confidence 57788998887666555554 246777776532 2567789998875
No 120
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=46.68 E-value=47 Score=20.14 Aligned_cols=105 Identities=10% Similarity=0.028 Sum_probs=53.9
Q ss_pred CCeeEEEEcCccc-HHHHHHHhhcCCCeEEec--ccccHHHHHh--hCceEEecCC--hHHHHHHHH--h-CCcEEEecC
Q 031484 13 HNLFIIWQTGVEA-FNEMESLVRNHPRLLLTP--FLHSMDLAYA--AADLIVSRAG--AMTCYEILA--T-GKPSILIPS 82 (159)
Q Consensus 13 ~~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~--~~~~~~~~l~--~ad~~i~~~G--~~t~~Eal~--~-g~P~I~~p~ 82 (159)
...+++++..... ...+.+.+.. .++.+.. ...+....+. ..|++| .++ +..+++.+. . .+|+|++..
T Consensus 17 ~~~~ilivdd~~~~~~~l~~~L~~-~g~~v~~~~~~~~al~~l~~~~~dlvi-~~~~~g~~~~~~l~~~~~~~~ii~ls~ 94 (137)
T 2pln_A 17 GSMRVLLIEKNSVLGGEIEKGLNV-KGFMADVTESLEDGEYLMDIRNYDLVM-VSDKNALSFVSRIKEKHSSIVVLVSSD 94 (137)
T ss_dssp TCSEEEEECSCHHHHHHHHHHHHH-TTCEEEEESCHHHHHHHHHHSCCSEEE-ECSTTHHHHHHHHHHHSTTSEEEEEES
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHH-cCcEEEEeCCHHHHHHHHHcCCCCEEE-EcCccHHHHHHHHHhcCCCccEEEEeC
Confidence 4557766655442 4455555543 2334332 2223334443 468888 444 222333333 3 789998743
Q ss_pred CCCCCchHHHHHHHHHHcCc-eeeeccCCC-ChhHHHHHHHHHhcC
Q 031484 83 PNVAEGHQFKNASLMAKLAD-SRIITEDEL-DSITLETTIEEILGN 126 (159)
Q Consensus 83 ~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~-~~~~l~~~l~~ll~~ 126 (159)
. .... ......+.|. +++..+ . +.+.|...+..++..
T Consensus 95 ~----~~~~-~~~~~~~~g~~~~l~kP--~~~~~~l~~~i~~~~~~ 133 (137)
T 2pln_A 95 N----PTSE-EEVHAFEQGADDYIAKP--YRSIKALVARIEARLRF 133 (137)
T ss_dssp S----CCHH-HHHHHHHTTCSEEEESS--CSCHHHHHHHHHHHTC-
T ss_pred C----CCHH-HHHHHHHcCCceeeeCC--CCCHHHHHHHHHHHHhh
Confidence 2 1212 2223334454 555544 3 488999999887753
No 121
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=46.68 E-value=89 Score=23.39 Aligned_cols=81 Identities=6% Similarity=0.030 Sum_probs=43.8
Q ss_pred hHHHHHhhcCCeeEEEEcCccc----HHHHHHHhhcCCCeEE--eccc--c---c---HHHHHh--hCceEEecCChHHH
Q 031484 4 LYYQMLMEKHNLFIIWQTGVEA----FNEMESLVRNHPRLLL--TPFL--H---S---MDLAYA--AADLIVSRAGAMTC 67 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~G~~~----~~~l~~~~~~~~~v~~--~~~~--~---~---~~~~l~--~ad~~i~~~G~~t~ 67 (159)
.+.+.++... -++++++++.. .+++.+.++. .++.+ ..+. + . ..+.+. .+|++|+=+|+ ++
T Consensus 22 ~l~~~l~~~g-~~~livtd~~~~~~~~~~v~~~L~~-~g~~~~~~~~~ge~~~~~v~~~~~~~~~~~~d~IIavGGG-sv 98 (370)
T 1jq5_A 22 KIANYLEGIG-NKTVVIADEIVWKIAGHTIVNELKK-GNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGGG-KT 98 (370)
T ss_dssp GHHHHHTTTC-SEEEEEECHHHHHHTHHHHHHHHHT-TTCEEEEEECCSSCBHHHHHHHHHHHHHTTCSEEEEEESH-HH
T ss_pred HHHHHHHHcC-CeEEEEEChHHHHHHHHHHHHHHHH-cCCeEEEEeeCCCCCHHHHHHHHHHHHhcCCCEEEEeCCh-HH
Confidence 3445555544 47888888752 3444444432 22322 2221 1 1 223332 57999986664 33
Q ss_pred HH-----HHHhCCcEEEecCCCCCC
Q 031484 68 YE-----ILATGKPSILIPSPNVAE 87 (159)
Q Consensus 68 ~E-----al~~g~P~I~~p~~~~~~ 87 (159)
.. +...|+|+|.+|....++
T Consensus 99 ~D~aK~iA~~~~~p~i~IPTTa~tg 123 (370)
T 1jq5_A 99 LDTAKAVADELDAYIVIVPTAASTD 123 (370)
T ss_dssp HHHHHHHHHHHTCEEEEEESSCCSS
T ss_pred HHHHHHHHHhcCCCEEEeccccCCC
Confidence 34 234699999999864344
No 122
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=46.59 E-value=52 Score=20.66 Aligned_cols=103 Identities=9% Similarity=0.129 Sum_probs=52.9
Q ss_pred eeEEEEcCccc-HHHHHHHhhcCCCeEEeccc---ccHHHHHh----hCceEEecC---C--hHHHHHHH---HhCCcEE
Q 031484 15 LFIIWQTGVEA-FNEMESLVRNHPRLLLTPFL---HSMDLAYA----AADLIVSRA---G--AMTCYEIL---ATGKPSI 78 (159)
Q Consensus 15 ~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~---~~~~~~l~----~ad~~i~~~---G--~~t~~Eal---~~g~P~I 78 (159)
.+++++-.... ...+++.+... ++.+.+.. .+..+.+. ..|++|... + +..+++.+ ...+|+|
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~-g~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii 115 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSE-GFNIIDTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVI 115 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEE
T ss_pred eEEEEEeCCHHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEE
Confidence 46766655442 45555555432 34444222 23334443 458888632 2 22333333 3478998
Q ss_pred EecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhc
Q 031484 79 LIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 79 ~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
++... .... ......+.|. +++.++- +.+.|.+.+.+++.
T Consensus 116 ~ls~~----~~~~-~~~~~~~~g~~~~l~KP~--~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 116 MISAL----GKEQ-LVKDCLIKGAKTFIVKPL--DRAKVLQRVMSVFV 156 (157)
T ss_dssp EEESC----CCHH-HHHHHHHTTCSEEEESSC--CHHHHHHHHHHTTC
T ss_pred EEecc----CcHH-HHHHHHHcCCCEEEeCCC--CHHHHHHHHHHHhc
Confidence 87432 1212 2223344454 5555543 48899998888764
No 123
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=45.96 E-value=39 Score=24.89 Aligned_cols=42 Identities=17% Similarity=0.296 Sum_probs=26.0
Q ss_pred cCCh-HHHHHHHHhCCcEEEecCCCCCCch-HHHHHHHHHHcCceee
Q 031484 61 RAGA-MTCYEILATGKPSILIPSPNVAEGH-QFKNASLMAKLADSRI 105 (159)
Q Consensus 61 ~~G~-~t~~Eal~~g~P~I~~p~~~~~~~~-q~~~~~~~~~~~~g~~ 105 (159)
+||+ .|.-.|+-.|+|+.++|.. +.+. ..++ ..+.+.|+..+
T Consensus 227 ~SGsliTA~~Ale~gR~VfavPG~--i~~~~s~G~-n~LI~~GA~lv 270 (288)
T 3uqz_A 227 RSGSLITCERAMEEGRDVFAIPGS--ILDGLSDGC-HHLIQEGAKLV 270 (288)
T ss_dssp TCHHHHHHHHHHHTTCEEEECCCC--SSSSTTHHH-HHHHHTTCEEC
T ss_pred CChHHHHHHHHHHcCCeEEEECCC--CCCccchHH-HHHHHCCCEEE
Confidence 3454 5677799999999999864 2222 2333 34566675433
No 124
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=45.67 E-value=24 Score=23.70 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=21.7
Q ss_pred HHHHhhCceEEec-CChHHHHH---HHH-------hCCcEEEec
Q 031484 49 DLAYAAADLIVSR-AGAMTCYE---ILA-------TGKPSILIP 81 (159)
Q Consensus 49 ~~~l~~ad~~i~~-~G~~t~~E---al~-------~g~P~I~~p 81 (159)
..+...||.+|.- +|.+|+-| ++. .++| ++..
T Consensus 92 ~~~~~~sda~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll~ 134 (171)
T 1weh_A 92 GRLLDLGAGYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAVD 134 (171)
T ss_dssp HHHHHHEEEEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC
T ss_pred HHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEEC
Confidence 3455789998864 45678555 555 6899 7774
No 125
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=45.43 E-value=53 Score=20.39 Aligned_cols=109 Identities=8% Similarity=-0.009 Sum_probs=56.4
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcCCCeEEec--ccccHHHHHhh---CceEEecC---C--hHHHHHHH---HhCCcEEE
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNHPRLLLTP--FLHSMDLAYAA---ADLIVSRA---G--AMTCYEIL---ATGKPSIL 79 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~--~~~~~~~~l~~---ad~~i~~~---G--~~t~~Eal---~~g~P~I~ 79 (159)
..+++++-.... ...+...++. +..+.. ...+....+.. .|++|... + +..+++.+ ...+|+|+
T Consensus 4 ~~~ILivdd~~~~~~~l~~~L~~--~~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 81 (151)
T 3kcn_A 4 NERILLVDDDYSLLNTLKRNLSF--DFEVTTCESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLM 81 (151)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTT--TSEEEEESSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEE
T ss_pred CCeEEEEeCCHHHHHHHHHHhcc--CceEEEeCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEE
Confidence 346666655432 4555555543 344332 22344444542 38888532 2 22233333 34788887
Q ss_pred ecCCCCCCchHHHHHHHHHHcC-c-eeeeccCCCChhHHHHHHHHHhcCHHHHH
Q 031484 80 IPSPNVAEGHQFKNASLMAKLA-D-SRIITEDELDSITLETTIEEILGNEALMA 131 (159)
Q Consensus 80 ~p~~~~~~~~q~~~~~~~~~~~-~-g~~~~~~~~~~~~l~~~l~~ll~~~~~~~ 131 (159)
+... .... ......+.| . +++.++- +.+.|...+..++......+
T Consensus 82 ~s~~----~~~~-~~~~~~~~g~~~~~l~KP~--~~~~L~~~i~~~l~~~~~~~ 128 (151)
T 3kcn_A 82 LTGN----QDLT-TAMEAVNEGQVFRFLNKPC--QMSDIKAAINAGIKQYDLVT 128 (151)
T ss_dssp EECG----GGHH-HHHHHHHHTCCSEEEESSC--CHHHHHHHHHHHHHHHHHHH
T ss_pred EECC----CCHH-HHHHHHHcCCeeEEEcCCC--CHHHHHHHHHHHHHHHHHHH
Confidence 6432 2222 222233445 3 6665543 48999999999887555443
No 126
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=45.41 E-value=1.3e+02 Score=24.82 Aligned_cols=75 Identities=16% Similarity=0.355 Sum_probs=43.1
Q ss_pred hHHHHHhhcCCeeEEE-EcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhh----CceEEecCCh------HHH
Q 031484 4 LYYQMLMEKHNLFIIW-QTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAA----ADLIVSRAGA------MTC 67 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~----ad~~i~~~G~------~t~ 67 (159)
.+.+.|... +++.++ +-|.....-+.. +...++++++....| +.+-|+. --++++.+|+ +.+
T Consensus 87 ~lv~~L~~~-GV~~vFg~PG~~~~pl~da-l~~~~~i~~v~~~hE~~Aa~aAdGyAr~tGkpgvv~~TsGpG~~N~~~gi 164 (677)
T 1t9b_A 87 IFNEMMSRQ-NVDTVFGYPGGAILPVYDA-IHNSDKFNFVLPKHEQGAGHMAEGYARASGKPGVVLVTSGPGATNVVTPM 164 (677)
T ss_dssp HHHHHHHHT-TCCEEEECCCGGGHHHHHH-TTTCSSSEEECCSSHHHHHHHHHHHHHHHSSCEEEEECSTHHHHTTHHHH
T ss_pred HHHHHHHHc-CCCEEEEecCccHHHHHHH-HHhCCCCeEEEeCChHHHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHH
Confidence 345555553 444433 334433333333 323356777766653 3443432 3356777884 358
Q ss_pred HHHHHhCCcEEEe
Q 031484 68 YEILATGKPSILI 80 (159)
Q Consensus 68 ~Eal~~g~P~I~~ 80 (159)
.||..-++|+|++
T Consensus 165 a~A~~d~vPllvI 177 (677)
T 1t9b_A 165 ADAFADGIPMVVF 177 (677)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 9999999999987
No 127
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=45.21 E-value=63 Score=22.29 Aligned_cols=57 Identities=26% Similarity=0.176 Sum_probs=33.8
Q ss_pred HHHhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccC--C---------CChhHHHHHHHHHhcC
Q 031484 70 ILATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITED--E---------LDSITLETTIEEILGN 126 (159)
Q Consensus 70 al~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~--~---------~~~~~l~~~l~~ll~~ 126 (159)
++..++|+++.|.....-.....|...+.+.|.-++-+.. . .+.+.+.+.+.+.++.
T Consensus 119 ~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~~G~~i~~P~~~~~~~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 119 TLRNGKPVVVGISTNDALGLNGINIMRLMATKNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp HHHTTCCEEEEEEETTTTTTTHHHHHHHHTSTTEEECCEEESCTTTCTTCEEECGGGHHHHHHHHHTT
T ss_pred HhhcCCCEEEEECCChhHHHhHHHHHHHHHCCCEEECCCCccccccCCCcccCCHHHHHHHHHHHHhc
Confidence 3456999999876321112334488888887876553321 1 1235677777777653
No 128
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=43.45 E-value=86 Score=22.26 Aligned_cols=105 Identities=13% Similarity=0.096 Sum_probs=58.8
Q ss_pred cCCeeEEEEcCcccHHHHHHHhhcCC----CeEEecccc------cHHHHHh--hCceEEecCCh--HHHHHHH------
Q 031484 12 KHNLFIIWQTGVEAFNEMESLVRNHP----RLLLTPFLH------SMDLAYA--AADLIVSRAGA--MTCYEIL------ 71 (159)
Q Consensus 12 ~~~~~~~~~~G~~~~~~l~~~~~~~~----~v~~~~~~~------~~~~~l~--~ad~~i~~~G~--~t~~Eal------ 71 (159)
.++-++++..|....+.+.+.++..+ .+.++...+ .+.+.+. ..|+++..|+. ..+.+.+
T Consensus 139 ~~g~~vLi~rg~~~r~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~~~~d~v~ftS~s~v~~~~~~~~~~~~~ 218 (269)
T 3re1_A 139 VPGSRVLIMRGNEGRELLAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEVERLNGLVVSSGQGFEHLLQLAGDSWPD 218 (269)
T ss_dssp SSSCEEEEEECSSCCCHHHHHHHHTTCEEEEEECEEEECCCCCTTTTHHHHHHTTCCEEECSSHHHHTTTHHHHGGGHHH
T ss_pred CCCCEEEEEccCccHHHHHHHHHHCCCEEEEEeEEEEECCCCCHHHHHHHHHcCCCCEEEEcCHHHHHHHHHHhhHHHHH
Confidence 45668888888764444443333211 223333221 2334443 56887765542 2233332
Q ss_pred HhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhc
Q 031484 72 ATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 72 ~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
..+++++++ ++ ..++.+.+.|.-..+..+..+.+.+.+++.+.+.
T Consensus 219 l~~~~~~aI-------G~--~Ta~~l~~~G~~~~~va~~~t~~~l~~al~~~~~ 263 (269)
T 3re1_A 219 LAGLPLFVP-------SP--RVASLAQAAGARNVIDCRGASAAALLAALRDQPQ 263 (269)
T ss_dssp HTTSCEEES-------SH--HHHHHHHHHTCSSEEECSSSSHHHHHHHHHHSCC
T ss_pred HhCCeEEEE-------CH--HHHHHHHHCCCCceEECCCCCHHHHHHHHHHHhc
Confidence 346787765 22 2566788888765554455678899988887664
No 129
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=42.86 E-value=56 Score=19.99 Aligned_cols=106 Identities=16% Similarity=0.126 Sum_probs=54.5
Q ss_pred CCeeEEEEcCcc-cHHHHHHHhhcCCCeEEecc--cccHHHHHh--hCceEEecC---C--hHHHHHHHH-----hCCcE
Q 031484 13 HNLFIIWQTGVE-AFNEMESLVRNHPRLLLTPF--LHSMDLAYA--AADLIVSRA---G--AMTCYEILA-----TGKPS 77 (159)
Q Consensus 13 ~~~~~~~~~G~~-~~~~l~~~~~~~~~v~~~~~--~~~~~~~l~--~ad~~i~~~---G--~~t~~Eal~-----~g~P~ 77 (159)
...+++++.... ....+...+.. .++.+... ..+....+. ..|++|... + +..+++.+. ..+|+
T Consensus 7 ~~~~iLivd~~~~~~~~l~~~L~~-~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pi 85 (147)
T 2zay_A 7 KWWRIMLVDTQLPALAASISALSQ-EGFDIIQCGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPV 85 (147)
T ss_dssp -CEEEEEECTTGGGGHHHHHHHHH-HTEEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCE
T ss_pred CCceEEEEeCCHHHHHHHHHHHHH-cCCeEEEeCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCE
Confidence 456777665554 34555555443 23444422 223334443 478888532 2 233455444 47899
Q ss_pred EEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhc
Q 031484 78 ILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 78 I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
|++... .........+...-.+++..+ ++.+.|...+..++.
T Consensus 86 i~ls~~----~~~~~~~~~~~~g~~~~l~kp--~~~~~L~~~i~~~~~ 127 (147)
T 2zay_A 86 IALSGR----ATAKEEAQLLDMGFIDFIAKP--VNAIRLSARIKRVLK 127 (147)
T ss_dssp EEEESS----CCHHHHHHHHHHTCSEEEESS--CCHHHHHHHHHHHHH
T ss_pred EEEeCC----CCHHHHHHHHhCCCCEEEeCC--CCHHHHHHHHHHHHH
Confidence 987432 121222233333333655554 348899998888764
No 130
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=40.06 E-value=1.4e+02 Score=23.71 Aligned_cols=76 Identities=11% Similarity=0.110 Sum_probs=43.0
Q ss_pred hhHHHHHhhcCCeeEEE-EcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHh---hCceEEecCCh------HHH
Q 031484 3 NLYYQMLMEKHNLFIIW-QTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYA---AADLIVSRAGA------MTC 67 (159)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~---~ad~~i~~~G~------~t~ 67 (159)
+.+.+.|... +++.++ +-|.....-+..+. ..+.++++...+| +.+-|+ .--++++.+|+ +.+
T Consensus 8 ~~l~~~L~~~-GV~~vfg~PG~~~~~l~~al~-~~~~i~~v~~~~E~~Aa~~A~Gyar~tg~~v~~~TsGpG~~N~~~gi 85 (563)
T 2vk8_A 8 KYLFERLKQV-NVNTVFGLPGDFNLSLLDKIY-EVEGMRWAGNANELNAAYAADGYARIKGMSCIITTFGVGELSALNGI 85 (563)
T ss_dssp HHHHHHHHHT-TCCEEEECCCGGGHHHHHGGG-GSTTCEECCCSSHHHHHHHHHHHHHHHSCEEEEEETTHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCEEEEcCCcchHHHHHHHh-hcCCceEEccCchHHHHHHHHHHHHhhCCcEEEEcCCCcHHHHHHHH
Confidence 3455556554 444444 33443333333332 2346777765543 333332 22356677884 348
Q ss_pred HHHHHhCCcEEEe
Q 031484 68 YEILATGKPSILI 80 (159)
Q Consensus 68 ~Eal~~g~P~I~~ 80 (159)
.||..-++|+|++
T Consensus 86 a~A~~~~~Pll~i 98 (563)
T 2vk8_A 86 AGSYAEHVGVLHV 98 (563)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHhhCCCEEEE
Confidence 8999999999997
No 131
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=39.89 E-value=1.1e+02 Score=22.58 Aligned_cols=74 Identities=9% Similarity=0.032 Sum_probs=39.9
Q ss_pred HHHHHhhcCCeeEEEEcCcccHHHHHHHhhcCCCeEEec---------------ccccHHHHHhhCceEEecCCh----H
Q 031484 5 YYQMLMEKHNLFIIWQTGVEAFNEMESLVRNHPRLLLTP---------------FLHSMDLAYAAADLIVSRAGA----M 65 (159)
Q Consensus 5 ~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~---------------~~~~~~~~l~~ad~~i~~~G~----~ 65 (159)
+.+.+..+|+++++.++.... +.....++.. ++.+++ ...+..+++..+|+++...+. .
T Consensus 17 ~~r~l~~~~~~elvav~d~~~-~~~~~~~~~~-g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDvV~~aTp~~~h~~ 94 (334)
T 2czc_A 17 VAYAVTKQDDMELIGITKTKP-DFEAYRAKEL-GIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDIIVDATPGGIGAK 94 (334)
T ss_dssp HHHHHHTCTTEEEEEEEESSC-SHHHHHHHHT-TCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEEEECCSTTHHHH
T ss_pred HHHHHhcCCCCEEEEEEcCCH-HHHHHHHHhc-CccccccccccceeccCCceEEcCcHHHhccCCCEEEECCCccccHH
Confidence 445566678899888776531 1111111111 111111 112456667789998754442 2
Q ss_pred HHHHHHHhCCcEEEe
Q 031484 66 TCYEILATGKPSILI 80 (159)
Q Consensus 66 t~~Eal~~g~P~I~~ 80 (159)
....++..|+++|+.
T Consensus 95 ~a~~~l~aGk~Vi~s 109 (334)
T 2czc_A 95 NKPLYEKAGVKAIFQ 109 (334)
T ss_dssp HHHHHHHHTCEEEEC
T ss_pred HHHHHHHcCCceEee
Confidence 244577889998853
No 132
>2g8l_A 287AA long hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.04A {Pyrococcus horikoshii} SCOP: e.50.1.1
Probab=39.50 E-value=27 Score=25.86 Aligned_cols=35 Identities=17% Similarity=0.330 Sum_probs=27.5
Q ss_pred ccHHHHHhhCceEEecCChHHHHHHHH--hCCcEEEecC
Q 031484 46 HSMDLAYAAADLIVSRAGAMTCYEILA--TGKPSILIPS 82 (159)
Q Consensus 46 ~~~~~~l~~ad~~i~~~G~~t~~Eal~--~g~P~I~~p~ 82 (159)
+++.+.++.||++|+++- +. +|.+. ++.|+...-.
T Consensus 237 ~el~~~~~~adLVI~KG~-~N-ye~L~~d~~~~i~~L~~ 273 (299)
T 2g8l_A 237 REFMEAFNKADVIIAKGQ-GN-FETLSEINDSRIFFLLK 273 (299)
T ss_dssp HHHHHHHHHCSEEEEEHH-HH-HHHHTTSCCTTEEEEEE
T ss_pred HHHHHHHhcCCEEEEeCC-ch-HhhhhcCCCCCeehhhh
Confidence 478899999999999843 44 79888 5889887644
No 133
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=39.31 E-value=96 Score=21.65 Aligned_cols=102 Identities=14% Similarity=0.126 Sum_probs=56.3
Q ss_pred cCCeeEEEEcCcccHHHHHHHhhcCC----CeEEecccc------cHHHHHh--hCceEEecCC--hHHHHHHH------
Q 031484 12 KHNLFIIWQTGVEAFNEMESLVRNHP----RLLLTPFLH------SMDLAYA--AADLIVSRAG--AMTCYEIL------ 71 (159)
Q Consensus 12 ~~~~~~~~~~G~~~~~~l~~~~~~~~----~v~~~~~~~------~~~~~l~--~ad~~i~~~G--~~t~~Eal------ 71 (159)
.++-++++..|....+.+.+.++..+ .+.++...+ ++.+.+. ..|+++..|+ ...+.+.+
T Consensus 131 ~~~~~vL~~rg~~~r~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~~~~d~v~ftS~s~v~~~~~~~~~~~~~ 210 (254)
T 4es6_A 131 VHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLNGLVVSSGQGLQNLYQLAAADWPE 210 (254)
T ss_dssp SSSCEEEEEECSSCCCHHHHHHHHTTCEEEEEECEEEECCCCCTTHHHHHHHHTTCCEEECCSHHHHHHHHHHHGGGHHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHHHCCCEEEEEeEEEeeCCCCCHHHHHHHHHhCCCCEEEEcCHHHHHHHHHHhhHHHHH
Confidence 35668888888754444444332211 233333321 2344443 5688776554 22334433
Q ss_pred HhCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHH
Q 031484 72 ATGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEE 122 (159)
Q Consensus 72 ~~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ 122 (159)
..+++++++ ++ ..++.+.+.|.-..+..+..+.+.+.++|.+
T Consensus 211 l~~~~~~aI-------G~--~Ta~~l~~~G~~~~~~a~~~~~~~l~~ai~~ 252 (254)
T 4es6_A 211 IGRLPLFVP-------SP--RVAEMARELGAQRVIDCRGASAPALLAALTS 252 (254)
T ss_dssp HTTSCEEES-------SH--HHHHHHHHTTCSSEEECSSSSHHHHHHHHHH
T ss_pred HhCCeEEEE-------CH--HHHHHHHHcCCCceEECCCCCHHHHHHHHHh
Confidence 346777765 23 2566788888765554555567888877754
No 134
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=39.10 E-value=23 Score=26.31 Aligned_cols=31 Identities=13% Similarity=0.105 Sum_probs=24.0
Q ss_pred hhCceEEecCChHHHHHHHH--------hCCcEEEecCC
Q 031484 53 AAADLIVSRAGAMTCYEILA--------TGKPSILIPSP 83 (159)
Q Consensus 53 ~~ad~~i~~~G~~t~~Eal~--------~g~P~I~~p~~ 83 (159)
..+|++|+-+|.+|+.|++. .++|+.++|..
T Consensus 81 ~~~d~vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 81 FGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp HTCSEEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred cCCCEEEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 35799999899999888543 46788888875
No 135
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=38.90 E-value=65 Score=19.54 Aligned_cols=110 Identities=8% Similarity=0.004 Sum_probs=56.1
Q ss_pred CCeeEEEEcCccc-HHHHHHHhhcCCC---eEEecccccHHHHHhh-------CceEEec---CC--hHHHHHHHH----
Q 031484 13 HNLFIIWQTGVEA-FNEMESLVRNHPR---LLLTPFLHSMDLAYAA-------ADLIVSR---AG--AMTCYEILA---- 72 (159)
Q Consensus 13 ~~~~~~~~~G~~~-~~~l~~~~~~~~~---v~~~~~~~~~~~~l~~-------ad~~i~~---~G--~~t~~Eal~---- 72 (159)
...+++++-.... ...+...+..... +.......+..+.+.. .|++|.. ++ +..+++.+.
T Consensus 8 ~~~~iLivdd~~~~~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~ 87 (146)
T 3ilh_A 8 KIDSVLLIDDDDIVNFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQ 87 (146)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCG
T ss_pred ccceEEEEeCCHHHHHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhh
Confidence 3456766655443 4455555544332 2233333344455544 7888853 22 233344333
Q ss_pred ---hCCcEEEecCCCCCCchHHHHHHHHHHcC-c-eeeeccCCCChhHHHHHHHHHhcCHHH
Q 031484 73 ---TGKPSILIPSPNVAEGHQFKNASLMAKLA-D-SRIITEDELDSITLETTIEEILGNEAL 129 (159)
Q Consensus 73 ---~g~P~I~~p~~~~~~~~q~~~~~~~~~~~-~-g~~~~~~~~~~~~l~~~l~~ll~~~~~ 129 (159)
...|+|++... .... ......+.| . +++.++ ++.+.|.+.+.+....+.+
T Consensus 88 ~~~~~~~ii~~t~~----~~~~-~~~~~~~~g~~~~~l~KP--~~~~~L~~~i~~~~~~~~~ 142 (146)
T 3ilh_A 88 PMKNKSIVCLLSSS----LDPR-DQAKAEASDWVDYYVSKP--LTANALNNLYNKVLNEGHH 142 (146)
T ss_dssp GGTTTCEEEEECSS----CCHH-HHHHHHHCSSCCEEECSS--CCHHHHHHHHHHHHCC---
T ss_pred hccCCCeEEEEeCC----CChH-HHHHHHhcCCcceeeeCC--CCHHHHHHHHHHHHHhccC
Confidence 46788876432 1212 222334444 3 455444 4589999999988875543
No 136
>1to6_A Glycerate kinase; glycerate metabolism, structural genomics T831, PSI, protein structure initiative; 2.50A {Neisseria meningitidis serogroup A} SCOP: c.141.1.1
Probab=38.37 E-value=18 Score=27.70 Aligned_cols=34 Identities=21% Similarity=0.377 Sum_probs=24.2
Q ss_pred cHHHHHhhCceEEecCC-----------hHHHHHHHHhCCcEEEe
Q 031484 47 SMDLAYAAADLIVSRAG-----------AMTCYEILATGKPSILI 80 (159)
Q Consensus 47 ~~~~~l~~ad~~i~~~G-----------~~t~~Eal~~g~P~I~~ 80 (159)
.+.+.++.||++|+--| +..+......++|+|++
T Consensus 271 ~l~~~l~~ADLVITGEG~~D~QT~~GK~p~gVa~~A~~~~Pviai 315 (371)
T 1to6_A 271 DFDKKVSDVDLVIVGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAI 315 (371)
T ss_dssp THHHHTTTCSEEEECCSEECSTTTTTCHHHHHHTTSCTTCCEEEE
T ss_pred CHHHHhcCCCEEEECCCCCCCCCCCCcHHHHHHHHHhcCCCEEEE
Confidence 57889999999998443 22344444349999987
No 137
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=38.20 E-value=1.2e+02 Score=22.49 Aligned_cols=82 Identities=11% Similarity=0.114 Sum_probs=43.0
Q ss_pred hhHHHHHhhcCCeeEEEEcCccc----HHHHHHHhhcCC-CeEEecccc--c---HH--HHH--hhCceEEecCChHHHH
Q 031484 3 NLYYQMLMEKHNLFIIWQTGVEA----FNEMESLVRNHP-RLLLTPFLH--S---MD--LAY--AAADLIVSRAGAMTCY 68 (159)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~G~~~----~~~l~~~~~~~~-~v~~~~~~~--~---~~--~~l--~~ad~~i~~~G~~t~~ 68 (159)
+.+.+.++....-++++++++.. .+++.+.++... .+.++...+ . +. +.+ ..+|++|+=+|+ ++.
T Consensus 23 ~~l~~~l~~~g~~~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~d~IIavGGG-sv~ 101 (354)
T 3ce9_A 23 YNIGQIIKKGNFKRVSLYFGEGIYELFGETIEKSIKSSNIEIEAVETVKNIDFDEIGTNAFKIPAEVDALIGIGGG-KAI 101 (354)
T ss_dssp GGHHHHHGGGTCSEEEEEEETTHHHHHHHHHHHHHHTTTCEEEEEEEECCCBHHHHHHHHTTSCTTCCEEEEEESH-HHH
T ss_pred HHHHHHHHhcCCCeEEEEECccHHHHHHHHHHHHHHHcCCeEEEEecCCCCCHHHHHHHHHhhhcCCCEEEEECCh-HHH
Confidence 34455566544237888888753 234444333221 232222121 2 22 223 256899986664 333
Q ss_pred H-----HHHhCCcEEEecCCCC
Q 031484 69 E-----ILATGKPSILIPSPNV 85 (159)
Q Consensus 69 E-----al~~g~P~I~~p~~~~ 85 (159)
. +...|+|+|.+|..-.
T Consensus 102 D~aK~vA~~~~~p~i~IPTT~~ 123 (354)
T 3ce9_A 102 DAVKYMAFLRKLPFISVPTSTS 123 (354)
T ss_dssp HHHHHHHHHHTCCEEEEESCCS
T ss_pred HHHHHHHhhcCCCEEEecCccc
Confidence 3 2346999999998643
No 138
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=38.14 E-value=1.2e+02 Score=24.42 Aligned_cols=77 Identities=13% Similarity=0.061 Sum_probs=41.9
Q ss_pred hhHHHHHhhcCCee-EEEEcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhh----CceEEecCCh------HH
Q 031484 3 NLYYQMLMEKHNLF-IIWQTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAA----ADLIVSRAGA------MT 66 (159)
Q Consensus 3 ~~~~~~~~~~~~~~-~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~----ad~~i~~~G~------~t 66 (159)
+.+.+.|.+. +++ ++.+-|.....-+..+.+..+.++++...++ +.+-|+. --++++++|+ +.
T Consensus 8 ~~l~~~L~~~-GV~~vfg~PG~~~~~l~~al~~~~~~i~~v~~~hE~~Aa~~A~GyAr~tg~p~v~~~TsGpG~~N~~~g 86 (589)
T 2pgn_A 8 DLIVEALEEY-GTEQVVGFIGHTSHFVADAFSKSHLGKRVINPATELGGAWMVNGYNYVKDRSAAVGAWHCVGNLLLHAA 86 (589)
T ss_dssp HHHHHHHHHT-TCCEEEEECSGGGHHHHHHHHTSTTSTTCBCCSSHHHHHHHHHHHHHHHTSCCEEEEEEGGGGGGCHHH
T ss_pred HHHHHHHHHc-CCCEEEEecCCchHHHHHHHHhcCCCCeEEEeCcHHHHHHHHHHHHHHHCCCEEEEEecCchHHHHHHH
Confidence 3445556554 344 3344555433333333322144655554443 4444432 3356666763 35
Q ss_pred HHHHHHhCCcEEEe
Q 031484 67 CYEILATGKPSILI 80 (159)
Q Consensus 67 ~~Eal~~g~P~I~~ 80 (159)
+.||..-++|+|++
T Consensus 87 v~~A~~~~vPll~i 100 (589)
T 2pgn_A 87 MQEARTGRIPAVHI 100 (589)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHhcCCCEEEE
Confidence 88999999999987
No 139
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=38.06 E-value=64 Score=19.22 Aligned_cols=111 Identities=11% Similarity=0.041 Sum_probs=52.9
Q ss_pred cCCeeEEEEcCccc-HHHHHHHhhcCC-CeEEecccccHHHHHh--hCceEEecC---C--hHHHHHHHH---hCCcEEE
Q 031484 12 KHNLFIIWQTGVEA-FNEMESLVRNHP-RLLLTPFLHSMDLAYA--AADLIVSRA---G--AMTCYEILA---TGKPSIL 79 (159)
Q Consensus 12 ~~~~~~~~~~G~~~-~~~l~~~~~~~~-~v~~~~~~~~~~~~l~--~ad~~i~~~---G--~~t~~Eal~---~g~P~I~ 79 (159)
....+++++..... ...+.+.+...+ .+.......+..+.+. ..|++|... + +..+++.+. ..+|+|+
T Consensus 5 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 84 (130)
T 3eod_A 5 LVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLV 84 (130)
T ss_dssp TTTCEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEE
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEE
Confidence 34567777655543 445555554322 2332222223334443 368888632 1 222333333 3688988
Q ss_pred ecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCH
Q 031484 80 IPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNE 127 (159)
Q Consensus 80 ~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~ 127 (159)
+... .......+.+...-.+++.++-+ +.+.+.+.+..++...
T Consensus 85 ~t~~----~~~~~~~~~~~~g~~~~l~KP~~-~~~~l~~~i~~~l~~~ 127 (130)
T 3eod_A 85 ISAT----ENMADIAKALRLGVEDVLLKPVK-DLNRLREMVFACLYPS 127 (130)
T ss_dssp EECC----CCHHHHHHHHHHCCSEEEESCC----CHHHHHHHHHHC--
T ss_pred EEcC----CCHHHHHHHHHcCCCEEEeCCCC-cHHHHHHHHHHHhchh
Confidence 7432 12222223333333356655531 3788999998887643
No 140
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=37.63 E-value=65 Score=19.24 Aligned_cols=104 Identities=11% Similarity=0.002 Sum_probs=53.1
Q ss_pred eeEEEEcCccc-HHHHHHHhhcCC---CeEEecccccHHHHHh---------hCceEEecC---C--hHHHHHHHH----
Q 031484 15 LFIIWQTGVEA-FNEMESLVRNHP---RLLLTPFLHSMDLAYA---------AADLIVSRA---G--AMTCYEILA---- 72 (159)
Q Consensus 15 ~~~~~~~G~~~-~~~l~~~~~~~~---~v~~~~~~~~~~~~l~---------~ad~~i~~~---G--~~t~~Eal~---- 72 (159)
.+++++..... ...+.+.+...+ .+.......+....+. ..|++|... + +..+++.+.
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~ 82 (140)
T 1k68_A 3 KKIFLVEDNKADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPT 82 (140)
T ss_dssp CEEEEECCCHHHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTT
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCcc
Confidence 45666555432 455555554432 2333333334445554 368887532 2 223344433
Q ss_pred -hCCcEEEecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhc
Q 031484 73 -TGKPSILIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 73 -~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
..+|+|++... .......+ ..+.|. +++..+ .+.+.+...+.+++.
T Consensus 83 ~~~~pii~ls~~----~~~~~~~~-~~~~g~~~~l~kP--~~~~~l~~~i~~~~~ 130 (140)
T 1k68_A 83 LKRIPVVVLSTS----INEDDIFH-SYDLHVNCYITKS--ANLSQLFQIVKGIEE 130 (140)
T ss_dssp GGGSCEEEEESC----CCHHHHHH-HHHTTCSEEEECC--SSHHHHHHHHHHHHH
T ss_pred cccccEEEEecC----CcHHHHHH-HHHhchhheecCC--CCHHHHHHHHHHHHH
Confidence 46899987432 11122222 334454 555554 348899888887763
No 141
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=37.62 E-value=1.1e+02 Score=21.84 Aligned_cols=104 Identities=13% Similarity=0.093 Sum_probs=56.0
Q ss_pred CCeeEEEEcCcccHHHHHHHhhcCC----CeEEecccc------cHHHHHh---hCceEEecCC--hHHHHHHHH-----
Q 031484 13 HNLFIIWQTGVEAFNEMESLVRNHP----RLLLTPFLH------SMDLAYA---AADLIVSRAG--AMTCYEILA----- 72 (159)
Q Consensus 13 ~~~~~~~~~G~~~~~~l~~~~~~~~----~v~~~~~~~------~~~~~l~---~ad~~i~~~G--~~t~~Eal~----- 72 (159)
++-++++..|....+.|.+.++..+ .+.++...+ .+.+.+. ..|+++..|. ...+.+.+.
T Consensus 156 ~g~~vLi~rg~~~r~~L~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~l~~~~~~d~v~ftS~~~v~~f~~~~~~~~~~ 235 (286)
T 1jr2_A 156 SALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPASITFFSPSGLTYSLKHIQELSGD 235 (286)
T ss_dssp CSSCEEEEESCGGGCCHHHHHHTTTCCEEEEECEEEEECTTHHHHHHHHHHHHCSCSEEEESSHHHHHHHHHHHHHHHGG
T ss_pred CCCeEEEECChhhHHHHHHHHHHCCCeeEEEEEEEEeeCCCcHHHHHHHHHhCCCCCEEEEEChHHHHHHHHHHhhhccc
Confidence 3557888888754444444443221 223333221 2334443 4688876554 223344332
Q ss_pred --hCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhc
Q 031484 73 --TGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 73 --~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
.+++++++ ++ ..++.+.+.|.-..+..+..+.+.+.+.+.+.+.
T Consensus 236 ~l~~~~i~aI-------G~--~Ta~~l~~~G~~~~~va~~~~~~~ll~al~~~~~ 281 (286)
T 1jr2_A 236 NIDQIKFAAI-------GP--TTARALAAQGLPVSCTAESPTPQALATGIRKALQ 281 (286)
T ss_dssp GGGGSEEEES-------SH--HHHHHHHHTTCCCSEECSSSSHHHHHHHHHHHTC
T ss_pred cccCCEEEEE-------CH--HHHHHHHHcCCCceEecCCCCHHHHHHHHHHHHh
Confidence 24555554 33 2466788888755443445568889888887764
No 142
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=37.26 E-value=1.2e+02 Score=22.18 Aligned_cols=36 Identities=8% Similarity=0.039 Sum_probs=25.6
Q ss_pred cHHHHHhhCceEEecCCh----HHHHHHHHhCCcEEEecC
Q 031484 47 SMDLAYAAADLIVSRAGA----MTCYEILATGKPSILIPS 82 (159)
Q Consensus 47 ~~~~~l~~ad~~i~~~G~----~t~~Eal~~g~P~I~~p~ 82 (159)
++.+++..+|++|--+.+ ..+..++..|+|+|+...
T Consensus 81 dl~~ll~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTT 120 (288)
T 3ijp_A 81 DPESAFSNTEGILDFSQPQASVLYANYAAQKSLIHIIGTT 120 (288)
T ss_dssp CHHHHTTSCSEEEECSCHHHHHHHHHHHHHHTCEEEECCC
T ss_pred CHHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 567788899999843332 234557889999998644
No 143
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=36.95 E-value=1e+02 Score=21.34 Aligned_cols=56 Identities=23% Similarity=0.162 Sum_probs=35.8
Q ss_pred HHHHhCCcEEEecCCC-CCCchHHHHHHHHHHcCceeeeccC-----C------CChhHHHHHHHHHhc
Q 031484 69 EILATGKPSILIPSPN-VAEGHQFKNASLMAKLADSRIITED-----E------LDSITLETTIEEILG 125 (159)
Q Consensus 69 Eal~~g~P~I~~p~~~-~~~~~q~~~~~~~~~~~~g~~~~~~-----~------~~~~~l~~~l~~ll~ 125 (159)
.++..++|+++.|... ....+ ..|...+.+.|+-++.+.. + .+++.+.+.+.+.+.
T Consensus 116 ~~L~~~~plvlaPamn~~m~~h-~~Nm~~L~~~G~~ii~P~~~lacg~~g~g~mae~~~I~~~i~~~l~ 183 (207)
T 3mcu_A 116 ATLRNGKPVVLAVSTNDALGLN-GVNLMRLMATKNIYFVPFGQDAPEKKPNSMVARMELLEDTVLEALQ 183 (207)
T ss_dssp HHHHTTCCEEEEEEETTTTTTT-HHHHHHHHHBTTEEECCEEESCTTTSTTCEEECGGGHHHHHHHHHT
T ss_pred HHHhcCCCEEEEECCChhHHHH-HHHHHHHHHCCCEEECCCCccCCCCcCCcCCCCHHHHHHHHHHHHh
Confidence 4677899999987632 22344 4577788888876554321 1 236778877777664
No 144
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=36.89 E-value=95 Score=20.87 Aligned_cols=105 Identities=16% Similarity=0.142 Sum_probs=53.3
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcCCCeEEecc-cccHHHH---H--hhCceEEe---cCC--hHHHHHHH----HhCCcE
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNHPRLLLTPF-LHSMDLA---Y--AAADLIVS---RAG--AMTCYEIL----ATGKPS 77 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~-~~~~~~~---l--~~ad~~i~---~~G--~~t~~Eal----~~g~P~ 77 (159)
..+++++-.... ...+...+....++.+... .+....+ + ...|++|. .+| +..+++.+ ...+|+
T Consensus 7 ~~~IlivdD~~~~~~~l~~~L~~~~~~~v~~~~~~~~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~i 86 (225)
T 3klo_A 7 KLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAKE 86 (225)
T ss_dssp SEEEEEESCCSHHHHHHHHHHHHHSSEEEEEECGGGHHHHTTCSGGGGCCEEEEEGGGCCHHHHHHHHHHHHHHCTTCEE
T ss_pred ceEEEEEcCcHHHHHHHHHHHhhCCCceEEEEeCCcHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHhhCCCCcE
Confidence 456766655543 4555555543345555432 2222222 2 24688885 233 22233333 347898
Q ss_pred EEecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhc
Q 031484 78 ILIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 78 I~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
|++.... ... ......+.|. +++.++ .+++.+...+..++.
T Consensus 87 i~lt~~~---~~~--~~~~~~~~Ga~~~l~Kp--~~~~~L~~~i~~~~~ 128 (225)
T 3klo_A 87 VIINCPQ---DIE--HKLLFKWNNLAGVFYID--DDMDTLIKGMSKILQ 128 (225)
T ss_dssp EEEEECT---TCC--HHHHTTSTTEEEEEETT--CCHHHHHHHHHHHHT
T ss_pred EEEECCc---chh--HHHHHHHhCCCEEEecC--CCHHHHHHHHHHHHC
Confidence 8864321 111 1222233444 555554 348999999998875
No 145
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=36.73 E-value=69 Score=19.26 Aligned_cols=108 Identities=11% Similarity=0.094 Sum_probs=51.3
Q ss_pred eeEEEEcCccc-HHHHHHHhhcCCCeEEecccc---cHHHHHh--hCceEEec---CC--hHHHHHHHH---hCCcEEEe
Q 031484 15 LFIIWQTGVEA-FNEMESLVRNHPRLLLTPFLH---SMDLAYA--AADLIVSR---AG--AMTCYEILA---TGKPSILI 80 (159)
Q Consensus 15 ~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~~---~~~~~l~--~ad~~i~~---~G--~~t~~Eal~---~g~P~I~~ 80 (159)
.+++++-.... ...+...+...+++....... +..+.+. ..|++|.. ++ +..+++.+. ..+|+|++
T Consensus 4 ~~Ilivdd~~~~~~~l~~~l~~~~~~~~v~~~~~~~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~l 83 (133)
T 3b2n_A 4 TSLIIAEDQNMLRQAMVQLIKLHGDFEILADTDNGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIV 83 (133)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHSSEEEEEEESCHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCcEEEEEcCCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEE
Confidence 35555444332 344554444333333322222 3333332 46888852 22 233444443 36788876
Q ss_pred cCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcCHH
Q 031484 81 PSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGNEA 128 (159)
Q Consensus 81 p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~~~ 128 (159)
... .......+.+...-.+++.++- +.+.+...+.+++....
T Consensus 84 s~~----~~~~~~~~~~~~ga~~~l~Kp~--~~~~L~~~i~~~~~~~~ 125 (133)
T 3b2n_A 84 TTF----KRPGYFEKAVVNDVDAYVLKER--SIEELVETINKVNNGEK 125 (133)
T ss_dssp ESC----CCHHHHHHHHHTTCSEEEETTS--CHHHHHHHHHHHHC---
T ss_pred ecC----CCHHHHHHHHHcCCcEEEECCC--CHHHHHHHHHHHHcCCC
Confidence 432 1212223333333336665544 48999999988876443
No 146
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=36.29 E-value=76 Score=19.62 Aligned_cols=109 Identities=11% Similarity=0.088 Sum_probs=56.1
Q ss_pred cCCeeEEEEcCccc-HHHHHHHhhcCCCeEEeccc--ccHHHHHh--hCceEEec---CC--hHHHHHHHH---hCCcEE
Q 031484 12 KHNLFIIWQTGVEA-FNEMESLVRNHPRLLLTPFL--HSMDLAYA--AADLIVSR---AG--AMTCYEILA---TGKPSI 78 (159)
Q Consensus 12 ~~~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~--~~~~~~l~--~ad~~i~~---~G--~~t~~Eal~---~g~P~I 78 (159)
....+++++..... ...+...+.. .++.+.... .+....+. ..|++|.. ++ +..+++.+. ..+|+|
T Consensus 5 ~~~~~iLivdd~~~~~~~l~~~L~~-~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (154)
T 2rjn_A 5 YKNYTVMLVDDEQPILNSLKRLIKR-LGCNIITFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERV 83 (154)
T ss_dssp CSCCEEEEECSCHHHHHHHHHHHHT-TTCEEEEESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEE
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHH-cCCeEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEE
Confidence 34567777665543 4555555543 334444222 23334443 35888752 22 223334332 478998
Q ss_pred EecCCCCCCchHHHHHHHHHHcC-c-eeeeccCCCChhHHHHHHHHHhcCHH
Q 031484 79 LIPSPNVAEGHQFKNASLMAKLA-D-SRIITEDELDSITLETTIEEILGNEA 128 (159)
Q Consensus 79 ~~p~~~~~~~~q~~~~~~~~~~~-~-g~~~~~~~~~~~~l~~~l~~ll~~~~ 128 (159)
++... .. ........+.| . +++..+ ++.+.|...+..++....
T Consensus 84 ~ls~~----~~-~~~~~~~~~~g~~~~~l~kP--~~~~~L~~~i~~~~~~~~ 128 (154)
T 2rjn_A 84 VISGY----AD-AQATIDAVNRGKISRFLLKP--WEDEDVFKVVEKGLQLAF 128 (154)
T ss_dssp EEECG----GG-HHHHHHHHHTTCCSEEEESS--CCHHHHHHHHHHHHHHHH
T ss_pred EEecC----CC-HHHHHHHHhccchheeeeCC--CCHHHHHHHHHHHHHHHH
Confidence 87432 22 22222333444 3 555554 448899999988875433
No 147
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=36.21 E-value=91 Score=20.86 Aligned_cols=15 Identities=0% Similarity=-0.086 Sum_probs=10.5
Q ss_pred cHHHHHhhCceEEec
Q 031484 47 SMDLAYAAADLIVSR 61 (159)
Q Consensus 47 ~~~~~l~~ad~~i~~ 61 (159)
+..+++..+.+++..
T Consensus 118 ~~~~l~~~~~~vv~~ 132 (177)
T 3h05_A 118 KAEEITERWTVMACP 132 (177)
T ss_dssp THHHHHHHSEEEECC
T ss_pred hHHHHHHhCCEEEEc
Confidence 356777888887764
No 148
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=36.09 E-value=77 Score=19.62 Aligned_cols=105 Identities=14% Similarity=0.160 Sum_probs=52.3
Q ss_pred eeEEEEcCccc-HHHHHHHhhcCCCeEEecccccHHHHHh-----hCceEEec---CC--hHHHHHHH---HhCCcEEEe
Q 031484 15 LFIIWQTGVEA-FNEMESLVRNHPRLLLTPFLHSMDLAYA-----AADLIVSR---AG--AMTCYEIL---ATGKPSILI 80 (159)
Q Consensus 15 ~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~~~~~~~l~-----~ad~~i~~---~G--~~t~~Eal---~~g~P~I~~ 80 (159)
.+++++..... ...+.+.+.. .++.+... .+..+.+. ..|++|.. ++ +..+++.+ ...+|+|++
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~-~g~~v~~~-~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~l 81 (155)
T 1qkk_A 4 PSVFLIDDDRDLRKAMQQTLEL-AGFTVSSF-ASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILV 81 (155)
T ss_dssp CEEEEECSCHHHHHHHHHHHHH-TTCEEEEE-SCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHH-cCcEEEEE-CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEE
Confidence 45665555432 4455554443 23444322 22333332 35777742 22 22233433 247899987
Q ss_pred cCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhcCHH
Q 031484 81 PSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILGNEA 128 (159)
Q Consensus 81 p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~~~ 128 (159)
... .. ........+.|. +++..+ .+.+.|...+..++....
T Consensus 82 s~~----~~-~~~~~~~~~~g~~~~l~kP--~~~~~L~~~i~~~~~~~~ 123 (155)
T 1qkk_A 82 TGH----GD-IPMAVQAIQDGAYDFIAKP--FAADRLVQSARRAEEKRR 123 (155)
T ss_dssp ECG----GG-HHHHHHHHHTTCCEEEESS--CCHHHHHHHHHHHHHHHH
T ss_pred ECC----CC-hHHHHHHHhcCCCeEEeCC--CCHHHHHHHHHHHHHHHH
Confidence 432 12 222223334454 555544 348899999998876443
No 149
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=36.01 E-value=73 Score=19.32 Aligned_cols=105 Identities=11% Similarity=0.079 Sum_probs=51.7
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcCCCeEEeccc--ccHHHHHh--hCceEEec---CC--hHHHHHHHHh--CCcEEEec
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNHPRLLLTPFL--HSMDLAYA--AADLIVSR---AG--AMTCYEILAT--GKPSILIP 81 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~--~~~~~~l~--~ad~~i~~---~G--~~t~~Eal~~--g~P~I~~p 81 (159)
..+++++-.... ...+...+.. .++.+.... .+..+.+. ..|+++.. ++ +..+++.+.. .+|+|++.
T Consensus 4 ~~~Ilivdd~~~~~~~l~~~L~~-~g~~v~~~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls 82 (136)
T 2qzj_A 4 QTKILIIDGDKDNCQKLKGFLEE-KGISIDLAYNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMT 82 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHT-TTCEEEEESSHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHH-CCCEEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEE
Confidence 346655544432 4455555543 233333222 23333343 35888752 22 2334444432 68888764
Q ss_pred CCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhc
Q 031484 82 SPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 82 ~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
.. .......+.+.....+++.++- +.+.+...+..++.
T Consensus 83 ~~----~~~~~~~~~~~~ga~~~l~KP~--~~~~L~~~l~~~~~ 120 (136)
T 2qzj_A 83 YI----NEDQSILNALNSGGDDYLIKPL--NLEILYAKVKAILR 120 (136)
T ss_dssp SC----CCHHHHHHHHHTTCCEEEESSC--CHHHHHHHHHHHHH
T ss_pred cC----CCHHHHHHHHHcCCcEEEECCC--CHHHHHHHHHHHHH
Confidence 32 1222223333333346665543 48899988887764
No 150
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=35.96 E-value=33 Score=25.08 Aligned_cols=32 Identities=31% Similarity=0.315 Sum_probs=26.1
Q ss_pred HHhhCceEEecCChHHHHHHHHh--C-CcEEEecC
Q 031484 51 AYAAADLIVSRAGAMTCYEILAT--G-KPSILIPS 82 (159)
Q Consensus 51 ~l~~ad~~i~~~G~~t~~Eal~~--g-~P~I~~p~ 82 (159)
.+..+|++|+-+|.+|++.++.. + +|++-+..
T Consensus 65 ~~~~~DlvIvlGGDGT~L~aa~~~~~~~PilGIN~ 99 (278)
T 1z0s_A 65 ELENFDFIVSVGGDGTILRILQKLKRCPPIFGINT 99 (278)
T ss_dssp GGGGSSEEEEEECHHHHHHHHTTCSSCCCEEEEEC
T ss_pred ccCCCCEEEEECCCHHHHHHHHHhCCCCcEEEECC
Confidence 45689999999999999998864 3 89998854
No 151
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=35.85 E-value=77 Score=19.53 Aligned_cols=106 Identities=9% Similarity=0.077 Sum_probs=54.7
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcCCCeE-E--ecccccHHHHHh--hCceEEecC---C--hHHHHHHHH---hCCcEEE
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNHPRLL-L--TPFLHSMDLAYA--AADLIVSRA---G--AMTCYEILA---TGKPSIL 79 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~~~v~-~--~~~~~~~~~~l~--~ad~~i~~~---G--~~t~~Eal~---~g~P~I~ 79 (159)
..+++++..... ...+...+....... + .....+..+.+. ..|++|... + +..+++.+. ..+|+|+
T Consensus 20 m~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 99 (150)
T 4e7p_A 20 HMKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVV 99 (150)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEE
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEE
Confidence 456766655443 455666555433322 2 222233434443 468887532 2 223344333 3688888
Q ss_pred ecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhcC
Q 031484 80 IPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILGN 126 (159)
Q Consensus 80 ~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~ 126 (159)
+... .... ......+.|. +++.++- +.+.|.+.+.+++..
T Consensus 100 ls~~----~~~~-~~~~~~~~g~~~~l~Kp~--~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 100 VTTF----KRAG-YFERAVKAGVDAYVLKER--SIADLMQTLHTVLEG 140 (150)
T ss_dssp EESC----CCHH-HHHHHHHTTCSEEEETTS--CHHHHHHHHHHHHTT
T ss_pred EeCC----CCHH-HHHHHHHCCCcEEEecCC--CHHHHHHHHHHHHcC
Confidence 7432 1222 2223334454 5555543 489999999988763
No 152
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=35.44 E-value=14 Score=26.69 Aligned_cols=29 Identities=24% Similarity=0.374 Sum_probs=21.8
Q ss_pred hCceEEe-------------cCCh-HHHHHHHHhCCcEEEecC
Q 031484 54 AADLIVS-------------RAGA-MTCYEILATGKPSILIPS 82 (159)
Q Consensus 54 ~ad~~i~-------------~~G~-~t~~Eal~~g~P~I~~p~ 82 (159)
.-|++|| .||+ +..+|+..+|+|.|++..
T Consensus 84 ~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 84 RPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp CCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred CCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 5699986 3443 346899999999999855
No 153
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=35.41 E-value=1.5e+02 Score=22.62 Aligned_cols=83 Identities=6% Similarity=0.071 Sum_probs=43.3
Q ss_pred hHHHHHhhcCCeeEEEEcCcc------cHHHHHHHhhcCC-CeEEeccc---c---c---HHHHH--hhCceEEecCChH
Q 031484 4 LYYQMLMEKHNLFIIWQTGVE------AFNEMESLVRNHP-RLLLTPFL---H---S---MDLAY--AAADLIVSRAGAM 65 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~G~~------~~~~l~~~~~~~~-~v~~~~~~---~---~---~~~~l--~~ad~~i~~~G~~ 65 (159)
.+.+.++....-++++++|+. ..+++.+.++... .+.+++-+ | . ..+.+ ..+|++|+=+|+
T Consensus 33 ~l~~~l~~~g~~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGG- 111 (407)
T 1vlj_A 33 KIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGG- 111 (407)
T ss_dssp GHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESH-
T ss_pred HHHHHHHHcCCCeEEEEECchHHhhccHHHHHHHHHHHcCCeEEEecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCh-
Confidence 344555554424788888743 2345554443221 23333321 1 1 22333 367999986664
Q ss_pred HHHH---HHH--------------------hCCcEEEecCCCCCC
Q 031484 66 TCYE---ILA--------------------TGKPSILIPSPNVAE 87 (159)
Q Consensus 66 t~~E---al~--------------------~g~P~I~~p~~~~~~ 87 (159)
+++. +++ .++|+|.+|..-.++
T Consensus 112 sviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtg 156 (407)
T 1vlj_A 112 SVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATG 156 (407)
T ss_dssp HHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSC
T ss_pred hHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcc
Confidence 3333 222 389999999864333
No 154
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=35.14 E-value=81 Score=19.60 Aligned_cols=106 Identities=13% Similarity=0.086 Sum_probs=54.5
Q ss_pred CCeeEEEEcCccc-HHHHHHHhhcCCCeEEec--ccccHHHHHh--hCceEEec---CC--hHHHHHHHH-----hCCcE
Q 031484 13 HNLFIIWQTGVEA-FNEMESLVRNHPRLLLTP--FLHSMDLAYA--AADLIVSR---AG--AMTCYEILA-----TGKPS 77 (159)
Q Consensus 13 ~~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~--~~~~~~~~l~--~ad~~i~~---~G--~~t~~Eal~-----~g~P~ 77 (159)
...+++++-.... ...+.+.+... ++.+.. ...+..+.+. ..|++|.. ++ +..+++.+. ..+|+
T Consensus 6 ~~~~ILivdd~~~~~~~l~~~L~~~-g~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pi 84 (154)
T 3gt7_A 6 RAGEILIVEDSPTQAEHLKHILEET-GYQTEHVRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPV 84 (154)
T ss_dssp -CCEEEEECSCHHHHHHHHHHHHTT-TCEEEEESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCE
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHC-CCEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCE
Confidence 4557766655543 45555555432 333332 2233444443 46788753 22 333444443 46899
Q ss_pred EEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhc
Q 031484 78 ILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 78 I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
|++... .......+.+...-.+++.++- +.+.+...+.+++.
T Consensus 85 i~~s~~----~~~~~~~~~~~~g~~~~l~KP~--~~~~l~~~i~~~l~ 126 (154)
T 3gt7_A 85 ILLTIL----SDPRDVVRSLECGADDFITKPC--KDVVLASHVKRLLS 126 (154)
T ss_dssp EEEECC----CSHHHHHHHHHHCCSEEEESSC--CHHHHHHHHHHHHH
T ss_pred EEEECC----CChHHHHHHHHCCCCEEEeCCC--CHHHHHHHHHHHHH
Confidence 987432 1212222333333335555543 48899999988874
No 155
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=35.14 E-value=1.4e+02 Score=22.34 Aligned_cols=73 Identities=8% Similarity=0.029 Sum_probs=42.6
Q ss_pred HHHHHhhcCCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhh--CceEEecCC----hHHHHHHHHhCCcEE
Q 031484 5 YYQMLMEKHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAA--ADLIVSRAG----AMTCYEILATGKPSI 78 (159)
Q Consensus 5 ~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~--ad~~i~~~G----~~t~~Eal~~g~P~I 78 (159)
+...+...++++++.++.... +..++..+.. ++..+ .++.+++.. .|+++-..- ...+.+++..|++++
T Consensus 18 ~~~~l~~~~~~~l~av~d~~~-~~~~~~a~~~-g~~~~---~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl 92 (387)
T 3moi_A 18 MAPAMRHHPDAQIVAACDPNE-DVRERFGKEY-GIPVF---ATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHII 92 (387)
T ss_dssp HHHHHHHCTTEEEEEEECSCH-HHHHHHHHHH-TCCEE---SSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhCCCeEEEEEEeCCH-HHHHHHHHHc-CCCeE---CCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCcee
Confidence 344556678888887776642 2222221111 33332 456777875 888774222 234678999999999
Q ss_pred Ee-cC
Q 031484 79 LI-PS 82 (159)
Q Consensus 79 ~~-p~ 82 (159)
+= |.
T Consensus 93 ~EKP~ 97 (387)
T 3moi_A 93 VEKPL 97 (387)
T ss_dssp ECSCC
T ss_pred eeCCc
Confidence 73 44
No 156
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=34.68 E-value=81 Score=19.44 Aligned_cols=106 Identities=14% Similarity=0.063 Sum_probs=51.4
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcC-C--CeEEecccccHHHHHhh---CceEEecC---C--hHHHHHHHH---hCCcEE
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNH-P--RLLLTPFLHSMDLAYAA---ADLIVSRA---G--AMTCYEILA---TGKPSI 78 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~-~--~v~~~~~~~~~~~~l~~---ad~~i~~~---G--~~t~~Eal~---~g~P~I 78 (159)
..+++++..... ...+...+... + .+.......+....+.. .|++|... + +..+++.+. ..+|+|
T Consensus 3 ~~~iLivdd~~~~~~~l~~~L~~~~g~~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 82 (154)
T 2qsj_A 3 LTVVLIVDDHHLIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVA 82 (154)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHHCTTEEEEEESSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEEE
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCceEEEEecCHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEE
Confidence 356666655432 44555554432 2 22223333344455544 68887532 1 122333332 468888
Q ss_pred EecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhcC
Q 031484 79 LIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILGN 126 (159)
Q Consensus 79 ~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~ 126 (159)
++... .. ........+.|. +++.. +.+.+.|...+..++..
T Consensus 83 ~ls~~----~~-~~~~~~~~~~g~~~~l~k--p~~~~~L~~~l~~~~~~ 124 (154)
T 2qsj_A 83 LISGE----TD-HELIRAALEAGADGFIPK--SADPQVLIHAVSLILEG 124 (154)
T ss_dssp EC----------CHHHHHHHHTTCCBBCCT--TSCHHHHHHHHHHHHTT
T ss_pred EEeCC----CC-HHHHHHHHHccCCEEEeC--CCCHHHHHHHHHHHHcC
Confidence 86332 11 112222334454 44444 34588999999988764
No 157
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=33.97 E-value=1.8e+02 Score=23.22 Aligned_cols=75 Identities=15% Similarity=0.189 Sum_probs=41.8
Q ss_pred hHHHHHhhcCCeeEEE-EcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhh----CceEEecCChH------HH
Q 031484 4 LYYQMLMEKHNLFIIW-QTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAA----ADLIVSRAGAM------TC 67 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~----ad~~i~~~G~~------t~ 67 (159)
.+.+.|... +++-++ +-|.....-+..+.+ .+.++++....| +.+-|+. --++++.+|++ .+
T Consensus 16 ~lv~~L~~~-GV~~vFg~PG~~~~~l~dal~~-~~~i~~i~~~hE~~Aa~aAdGyAr~tG~pgv~~~TsGpG~~N~~~gi 93 (578)
T 3lq1_A 16 AFIEELVQA-GVKEAIISPGSRSTPLALMMAE-HPILKIYVDVDERSAGFFALGLAKASKRPVVLLCTSGTAAANYFPAV 93 (578)
T ss_dssp HHHHHHHHT-TCCEEEECCCTTTHHHHHHHHH-CSSCEEEECSSHHHHHHHHHHHHHHHCCCEEEEECSSHHHHTTHHHH
T ss_pred HHHHHHHHc-CCCEEEECCCCccHHHHHHHHh-CCCceEEEecCcHHHHHHHHHHHHhhCCCEEEEECCchhhhhhhHHH
Confidence 344555553 444333 344433332233222 356776665543 3333432 34567778843 48
Q ss_pred HHHHHhCCcEEEe
Q 031484 68 YEILATGKPSILI 80 (159)
Q Consensus 68 ~Eal~~g~P~I~~ 80 (159)
.||..-++|+|++
T Consensus 94 a~A~~d~vPll~i 106 (578)
T 3lq1_A 94 AEANLSQIPLIVL 106 (578)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHhcCCCeEEE
Confidence 8999999999987
No 158
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=33.84 E-value=79 Score=19.07 Aligned_cols=105 Identities=8% Similarity=0.037 Sum_probs=51.3
Q ss_pred CCeeEEEEcCccc-HHHHHHHhhcCCCeEEecc--cccHHHHHh--hCceEEecC---C--hHHHHHHHH-----hCCcE
Q 031484 13 HNLFIIWQTGVEA-FNEMESLVRNHPRLLLTPF--LHSMDLAYA--AADLIVSRA---G--AMTCYEILA-----TGKPS 77 (159)
Q Consensus 13 ~~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~--~~~~~~~l~--~ad~~i~~~---G--~~t~~Eal~-----~g~P~ 77 (159)
...+++++..... ...+.+.+... ++.+... ..+....+. ..|++|... + +..+++.+. ..+|+
T Consensus 6 ~~~~iLivdd~~~~~~~l~~~L~~~-g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pi 84 (142)
T 3cg4_A 6 HKGDVMIVDDDAHVRIAVKTILSDA-GFHIISADSGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAI 84 (142)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHT-TCEEEEESSHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHHC-CeEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCE
Confidence 4567766655442 44555554432 3343322 233444443 357877531 2 233445443 35788
Q ss_pred EEecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhc
Q 031484 78 ILIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 78 I~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
|++.... +.+ ......+.|. +++.. +.+.+.|...+..++.
T Consensus 85 i~~s~~~--~~~---~~~~~~~~g~~~~l~k--p~~~~~l~~~i~~~~~ 126 (142)
T 3cg4_A 85 VMLTAKN--APD---AKMIGLQEYVVDYITK--PFDNEDLIEKTTFFMG 126 (142)
T ss_dssp EEEECTT--CCC---CSSTTGGGGEEEEEES--SCCHHHHHHHHHHHHH
T ss_pred EEEECCC--CHH---HHHHHHhcCccEEEeC--CCCHHHHHHHHHHHHH
Confidence 8763321 111 0111223344 44444 3458899988887764
No 159
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=33.65 E-value=44 Score=20.56 Aligned_cols=60 Identities=17% Similarity=0.209 Sum_probs=33.5
Q ss_pred CeeEEEEcCccc------HHHHHHHhhcCC-Ce--EEecccccHHHHHhhCceEEecCChHHHHHHHHh-CCcEEE
Q 031484 14 NLFIIWQTGVEA------FNEMESLVRNHP-RL--LLTPFLHSMDLAYAAADLIVSRAGAMTCYEILAT-GKPSIL 79 (159)
Q Consensus 14 ~~~~~~~~G~~~------~~~l~~~~~~~~-~v--~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~~-g~P~I~ 79 (159)
..+++++||.+- ...+++.+...+ .+ ...+. .++...+..+|++|+..--. + .. ++|++.
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~-~~~~~~~~~~DlIist~~l~---~--~~~~ipvi~ 90 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRV-NEIETYMDGVHLICTTARVD---R--SFGDIPLVH 90 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECT-TTTTTSTTSCSEEEESSCCC---C--CSTTCCEEC
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecH-HHHhhccCCCCEEEECCccc---c--ccCCCCEEE
Confidence 457899999851 345555554322 22 23222 23444457899999854321 1 23 789886
No 160
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=33.45 E-value=1.1e+02 Score=20.42 Aligned_cols=16 Identities=25% Similarity=-0.012 Sum_probs=11.9
Q ss_pred HHHHHHhCCcEEEecC
Q 031484 67 CYEILATGKPSILIPS 82 (159)
Q Consensus 67 ~~Eal~~g~P~I~~p~ 82 (159)
+.+++..++|++-+-.
T Consensus 69 l~~~~~~~~PilGIC~ 84 (192)
T 1i1q_B 69 LLTRLRGKLPIIGICL 84 (192)
T ss_dssp HHHHHBTTBCEEEETH
T ss_pred HHHHHhcCCCEEEECc
Confidence 4566667999998755
No 161
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=33.38 E-value=1e+02 Score=20.11 Aligned_cols=107 Identities=7% Similarity=-0.053 Sum_probs=52.4
Q ss_pred cCCeeEEEEcCccc-HHHHHHHhhcCCCeEEecccccHHHHHhhCceEEec---CCh-HHHHHHHH---hCCcEEEecCC
Q 031484 12 KHNLFIIWQTGVEA-FNEMESLVRNHPRLLLTPFLHSMDLAYAAADLIVSR---AGA-MTCYEILA---TGKPSILIPSP 83 (159)
Q Consensus 12 ~~~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~~~~~~~l~~ad~~i~~---~G~-~t~~Eal~---~g~P~I~~p~~ 83 (159)
....+++++-.... ...+...+.. .++.+......-..+-...|++|.. +|. +.+.+.+. ..+|+|++...
T Consensus 10 ~~~~~iLivdd~~~~~~~l~~~L~~-~g~~v~~~~~~~~al~~~~dlvl~D~~mp~~~g~l~~~~~~~~~~~~ii~lt~~ 88 (196)
T 1qo0_D 10 LRELQVLVLNPPGEVSDALVLQLIR-IGCSVRQCWPPPEAFDVPVDVVFTSIFQNRHHDEIAALLAAGTPRTTLVALVEY 88 (196)
T ss_dssp GGGCEEEEESCTTHHHHHHHHHHHH-HTCEEEEECSCCSSCSSCCSEEEEECCSSTHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred hcCCeEEEEcCChhHHHHHHHHHHH-cCCeEEEecCchhhCCCCCCEEEEeCCCCccchHHHHHHhccCCCCCEEEEEcC
Confidence 44567776655543 3444444432 1233332221100111256888853 331 22445444 46889876432
Q ss_pred CCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhcC
Q 031484 84 NVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILGN 126 (159)
Q Consensus 84 ~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~ 126 (159)
.+.. ......+.|. +++.++- +++.+...+..++..
T Consensus 89 ----~~~~-~~~~a~~~ga~~~l~KP~--~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 89 ----ESPA-VLSQIIELECHGVITQPL--DAHRVLPVLVSARRI 125 (196)
T ss_dssp ----CSHH-HHHHHHHHTCSEEEESSC--CGGGHHHHHHHHHHH
T ss_pred ----CChH-HHHHHHHcCCCeeEecCc--CHHHHHHHHHHHHHH
Confidence 1212 2223334444 5666553 478888888877653
No 162
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=33.21 E-value=1.8e+02 Score=23.10 Aligned_cols=75 Identities=17% Similarity=0.264 Sum_probs=42.8
Q ss_pred hhHHHHHhhcCCee-EEEEcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhh----CceEEecCCh------HH
Q 031484 3 NLYYQMLMEKHNLF-IIWQTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAA----ADLIVSRAGA------MT 66 (159)
Q Consensus 3 ~~~~~~~~~~~~~~-~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~----ad~~i~~~G~------~t 66 (159)
+.+.+.|... +++ ++.+-|.....-+..+.+ +.++++...+| +.+-|+. --++++++|+ +.
T Consensus 15 ~~l~~~L~~~-GV~~vfg~PG~~~~~l~~al~~--~~i~~v~~~~E~~Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~~ 91 (566)
T 1ozh_A 15 DLVVSQLEAQ-GVRQVFGIPGAKIDKVFDSLLD--SSIRIIPVRHEANAAFMAAAVGRITGKAGVALVTSGPGCSNLITG 91 (566)
T ss_dssp HHHHHHHHHH-TCCEEEEECCTTTHHHHHHGGG--SSSEEEECSSHHHHHHHHHHHHHHHSSCEEEEECSTHHHHTTHHH
T ss_pred HHHHHHHHHC-CCCEEEEcCCCchHHHHHHHHh--CCCcEEEeCCHHHHHHHHHHHHHHHCCCEEEEEccChHHHHHHHH
Confidence 3444555554 333 333445443333333332 45776665543 4444432 3356778884 45
Q ss_pred HHHHHHhCCcEEEe
Q 031484 67 CYEILATGKPSILI 80 (159)
Q Consensus 67 ~~Eal~~g~P~I~~ 80 (159)
+.||..-++|+|++
T Consensus 92 l~~A~~~~vPll~i 105 (566)
T 1ozh_A 92 MATANSEGDPVVAL 105 (566)
T ss_dssp HHHHHHHTCCEEEE
T ss_pred HHHHHhcCCCEEEE
Confidence 89999999999987
No 163
>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold, gluconeogenesis, glycolysis, structural genomics; HET: G6Q; 1.65A {Staphylococcus aureus subsp} SCOP: c.80.1.2 PDB: 3ifs_A*
Probab=33.01 E-value=1.2e+02 Score=23.78 Aligned_cols=28 Identities=14% Similarity=0.263 Sum_probs=17.5
Q ss_pred CCeEEec-ccc--cHHHHHhhCc------eEEecCCh
Q 031484 37 PRLLLTP-FLH--SMDLAYAAAD------LIVSRAGA 64 (159)
Q Consensus 37 ~~v~~~~-~~~--~~~~~l~~ad------~~i~~~G~ 64 (159)
+++++.+ .++ .+.+++...| +++|++|+
T Consensus 109 ~~~~fv~dnvDp~~i~~~l~~l~~~~Tl~iViSKSgt 145 (446)
T 3ff1_A 109 PEIVFVGNHLSSTYTKELVDYLADKDFSVNVISKSGT 145 (446)
T ss_dssp CEEEEESSSCCHHHHHHHHHHGGGCCEEEEEECSSSC
T ss_pred ceEEEEecCCCHHHHHHHHHhcCccceEEEEEcCCCC
Confidence 3566775 554 5777776554 35688883
No 164
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=32.69 E-value=88 Score=19.26 Aligned_cols=103 Identities=11% Similarity=0.105 Sum_probs=53.0
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcCC---CeEEecccccHHHHHh-----------hCceEEec---CC--hHHHHHHHH-
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNHP---RLLLTPFLHSMDLAYA-----------AADLIVSR---AG--AMTCYEILA- 72 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~~---~v~~~~~~~~~~~~l~-----------~ad~~i~~---~G--~~t~~Eal~- 72 (159)
..+++++-.... ...+++.+...+ .+.......+..+.+. ..|++|.. ++ +..+++.+.
T Consensus 4 ~~~ILivddd~~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr~ 83 (152)
T 3heb_A 4 SVTIVMIEDDLGHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVKE 83 (152)
T ss_dssp -CEEEEECCCHHHHHHHHHHHHHTTCCCCEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHhCCCcceEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHHh
Confidence 356766655442 445555554322 3444433334445542 46788753 22 333445443
Q ss_pred ----hCCcEEEecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHH
Q 031484 73 ----TGKPSILIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEI 123 (159)
Q Consensus 73 ----~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~l 123 (159)
.++|+|++... .... ......+.|. +++.++ ++.+.|.+.+.++
T Consensus 84 ~~~~~~~pii~~t~~----~~~~-~~~~~~~~g~~~~l~KP--~~~~~l~~~i~~~ 132 (152)
T 3heb_A 84 NPHTRRSPVVILTTT----DDQR-EIQRCYDLGANVYITKP--VNYENFANAIRQL 132 (152)
T ss_dssp STTTTTSCEEEEESC----CCHH-HHHHHHHTTCSEEEECC--SSHHHHHHHHHHH
T ss_pred cccccCCCEEEEecC----CCHH-HHHHHHHCCCcEEEeCC--CCHHHHHHHHHHH
Confidence 36889987432 1222 2223334454 555554 3488998888876
No 165
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=32.43 E-value=1.9e+02 Score=23.00 Aligned_cols=75 Identities=16% Similarity=0.151 Sum_probs=41.1
Q ss_pred hHHHHHhhcCCeeEEE-EcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHh---hCceEEecCCh------HHHH
Q 031484 4 LYYQMLMEKHNLFIIW-QTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYA---AADLIVSRAGA------MTCY 68 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~---~ad~~i~~~G~------~t~~ 68 (159)
.+.+.|.. .+++.++ +-|.....-+..+.+ .+.++++...+| +..-|+ .--++++++|+ +.+.
T Consensus 30 ~l~~~L~~-~GV~~vfg~PG~~~~~l~~al~~-~~~i~~i~~~~E~~A~~~A~GyAr~tG~~v~~~tsGpG~~N~~~gi~ 107 (570)
T 2vbf_A 30 YLLDRLHE-LGIEEIFGVPGDYNLQFLDQIIS-REDMKWIGNANELNASYMADGYARTKKAAAFLTTFGVGELSAINGLA 107 (570)
T ss_dssp HHHHHHHH-TTCCEEEECCCGGGHHHHHHHHH-CSSCEEEECSSHHHHHHHHHHHHHHHSCEEEEEETTHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCCEEEECCCcchHHHHHHHhc-CCCCeEECcCcHHHHHHHHHHHHHHhCCeEEEEcCCCCHHHHHHHHH
Confidence 44455555 3444433 334433333333322 345776665543 333333 22345677883 3478
Q ss_pred HHHHhCCcEEEe
Q 031484 69 EILATGKPSILI 80 (159)
Q Consensus 69 Eal~~g~P~I~~ 80 (159)
||..-++|+|++
T Consensus 108 ~A~~~~vPlv~i 119 (570)
T 2vbf_A 108 GSYAENLPVVEI 119 (570)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHhhhCCCEEEE
Confidence 999999999997
No 166
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=32.01 E-value=40 Score=24.96 Aligned_cols=30 Identities=20% Similarity=0.264 Sum_probs=24.0
Q ss_pred hCceEEecCChHHHHHHHH------hCCcEEEecCC
Q 031484 54 AADLIVSRAGAMTCYEILA------TGKPSILIPSP 83 (159)
Q Consensus 54 ~ad~~i~~~G~~t~~Eal~------~g~P~I~~p~~ 83 (159)
.+|++|+-+|.+|+.|++. .++|+.++|..
T Consensus 80 ~~d~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 80 NYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp TCSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred CCCEEEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 5699999899999888653 36788899875
No 167
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=31.76 E-value=85 Score=18.81 Aligned_cols=108 Identities=12% Similarity=0.071 Sum_probs=55.9
Q ss_pred CCeeEEEEcCccc-HHHHHHHhhcCC-CeEEecccccHHHHHh--hCceEEecC---C--hHHHHHHHH---hCCcEEEe
Q 031484 13 HNLFIIWQTGVEA-FNEMESLVRNHP-RLLLTPFLHSMDLAYA--AADLIVSRA---G--AMTCYEILA---TGKPSILI 80 (159)
Q Consensus 13 ~~~~~~~~~G~~~-~~~l~~~~~~~~-~v~~~~~~~~~~~~l~--~ad~~i~~~---G--~~t~~Eal~---~g~P~I~~ 80 (159)
...+++++..... ...+.+.+.... .+.......+....+. ..|++|... + +..+++.+. ..+|+|++
T Consensus 6 ~~~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~ 85 (137)
T 3hdg_A 6 VALKILIVEDDTDAREWLSTIISNHFPEVWSAGDGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVI 85 (137)
T ss_dssp -CCCEEEECSCHHHHHHHHHHHHTTCSCEEEESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEEC
T ss_pred cccEEEEEeCCHHHHHHHHHHHHhcCcEEEEECCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEE
Confidence 3467777655543 455555554422 3444433334444443 568888632 2 223344333 36788876
Q ss_pred cCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhcCH
Q 031484 81 PSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILGNE 127 (159)
Q Consensus 81 p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~~ 127 (159)
... .......+.+ +.|. +++.++ ++.+.|.+.+.++++..
T Consensus 86 s~~----~~~~~~~~~~-~~g~~~~l~kP--~~~~~l~~~i~~~~~~~ 126 (137)
T 3hdg_A 86 SAF----SEMKYFIKAI-ELGVHLFLPKP--IEPGRLMETLEDFRHIK 126 (137)
T ss_dssp CCC----CCHHHHHHHH-HHCCSEECCSS--CCHHHHHHHHHHHHHHH
T ss_pred ecC----cChHHHHHHH-hCCcceeEcCC--CCHHHHHHHHHHHHHHH
Confidence 432 1212222333 4444 555444 44899999999887644
No 168
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=31.71 E-value=50 Score=24.06 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=24.4
Q ss_pred hhCceEEecCChHHHHHHHH------hCCcEEEecCC
Q 031484 53 AAADLIVSRAGAMTCYEILA------TGKPSILIPSP 83 (159)
Q Consensus 53 ~~ad~~i~~~G~~t~~Eal~------~g~P~I~~p~~ 83 (159)
...|++|+-+|.+|+.|.+. .+.|+-++|..
T Consensus 62 ~~~d~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 62 SKVDLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp TTCSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred cCCCEEEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 35789999899999888654 46788889875
No 169
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=31.37 E-value=2e+02 Score=22.88 Aligned_cols=75 Identities=11% Similarity=0.062 Sum_probs=41.4
Q ss_pred hhHHHHHhhcCCeeEE-EEcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhhC----ceEEecCCh------HH
Q 031484 3 NLYYQMLMEKHNLFII-WQTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAAA----DLIVSRAGA------MT 66 (159)
Q Consensus 3 ~~~~~~~~~~~~~~~~-~~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~a----d~~i~~~G~------~t 66 (159)
+.+.+.|... +++.+ .+-|.....-+..+.. .+++++...+| +.+-|+.+ -++++++|+ +.
T Consensus 14 ~~l~~~L~~~-GV~~vfg~PG~~~~~l~~al~~--~~i~~i~~~~E~~Aa~~A~GyAr~tg~pgv~~~TsGpG~~N~~~~ 90 (568)
T 2c31_A 14 HVLIDALKMN-DIDTMYGVVGIPITNLARMWQD--DGQRFYSFRHEQHAGYAASIAGYIEGKPGVCLTVSAPGFLNGVTS 90 (568)
T ss_dssp HHHHHHHHHT-TCCEEEECCCTTTHHHHHHHHH--TTCEEEECSSHHHHHHHHHHHHHHHSSCEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCEEEEeCCCccHHHHHHHHh--CCCcEEEeCcHHHHHHHHHHHHHHhCCCEEEEEcCCccHHHHHHH
Confidence 3445555553 44433 3444433332222222 24776665543 33333322 467778884 34
Q ss_pred HHHHHHhCCcEEEe
Q 031484 67 CYEILATGKPSILI 80 (159)
Q Consensus 67 ~~Eal~~g~P~I~~ 80 (159)
+.||..-++|+|++
T Consensus 91 i~~A~~~~vPll~i 104 (568)
T 2c31_A 91 LAHATTNCFPMILL 104 (568)
T ss_dssp HHHHHHHTCCEEEE
T ss_pred HHHHHhcCCCEEEE
Confidence 78999999999997
No 170
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=31.20 E-value=18 Score=26.50 Aligned_cols=29 Identities=17% Similarity=0.410 Sum_probs=21.6
Q ss_pred hCceEEe--------------cCCh-HHHHHHHHhCCcEEEecC
Q 031484 54 AADLIVS--------------RAGA-MTCYEILATGKPSILIPS 82 (159)
Q Consensus 54 ~ad~~i~--------------~~G~-~t~~Eal~~g~P~I~~p~ 82 (159)
.-|+||| .||+ +..+|+..+|+|.|++..
T Consensus 84 ~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (280)
T 1l5x_A 84 KYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSA 127 (280)
T ss_dssp CCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEc
Confidence 4689885 2443 336899999999999854
No 171
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=31.19 E-value=1.7e+02 Score=22.03 Aligned_cols=83 Identities=10% Similarity=0.034 Sum_probs=43.8
Q ss_pred hHHHHHhhcCCeeEEEEcCcc-------cHHHHHHHhhcCC-CeEEec-ccc--------cHHHHH--hhCceEEecCCh
Q 031484 4 LYYQMLMEKHNLFIIWQTGVE-------AFNEMESLVRNHP-RLLLTP-FLH--------SMDLAY--AAADLIVSRAGA 64 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~G~~-------~~~~l~~~~~~~~-~v~~~~-~~~--------~~~~~l--~~ad~~i~~~G~ 64 (159)
.+.+.++....-++++++++. ..+++.+.++... .+.+++ ..+ +..+.+ ..+|++|+=+|+
T Consensus 23 ~l~~~l~~~g~~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGG 102 (387)
T 3bfj_A 23 VVGERCQLLGGKKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGG 102 (387)
T ss_dssp GHHHHHHHTTCSEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEESH
T ss_pred HHHHHHHHcCCCEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 344555554424788888874 2445544443221 232332 221 123333 367999986664
Q ss_pred HHHHH---HHH--------------------hCCcEEEecCCCCCC
Q 031484 65 MTCYE---ILA--------------------TGKPSILIPSPNVAE 87 (159)
Q Consensus 65 ~t~~E---al~--------------------~g~P~I~~p~~~~~~ 87 (159)
+++. +++ -++|+|.+|..-.++
T Consensus 103 -sv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtg 147 (387)
T 3bfj_A 103 -SPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTA 147 (387)
T ss_dssp -HHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTTCC
T ss_pred -chhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcc
Confidence 3333 222 389999999864333
No 172
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=31.05 E-value=1.5e+02 Score=21.56 Aligned_cols=75 Identities=9% Similarity=0.053 Sum_probs=42.6
Q ss_pred HHHHHhhcCCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhh--CceEE-ecC-C--hHHHHHHHHhCCcEE
Q 031484 5 YYQMLMEKHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAA--ADLIV-SRA-G--AMTCYEILATGKPSI 78 (159)
Q Consensus 5 ~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~--ad~~i-~~~-G--~~t~~Eal~~g~P~I 78 (159)
+...++..++++++-++... .+..++..+..+--..+ .+..+++.. .|+|+ +.+ . .-.+.+|+..|++|+
T Consensus 39 ~~~~~~~~~~~~lvav~d~~-~~~a~~~a~~~g~~~~y---~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl 114 (350)
T 4had_A 39 VVPAIQDAENCVVTAIASRD-LTRAREMADRFSVPHAF---GSYEEMLASDVIDAVYIPLPTSQHIEWSIKAADAGKHVV 114 (350)
T ss_dssp HHHHHHHCSSEEEEEEECSS-HHHHHHHHHHHTCSEEE---SSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhCCCeEEEEEECCC-HHHHHHHHHHcCCCeee---CCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHhcCCEEE
Confidence 34556677888988777765 22222222211111222 356677764 57765 322 2 334678999999999
Q ss_pred E-ecCC
Q 031484 79 L-IPSP 83 (159)
Q Consensus 79 ~-~p~~ 83 (159)
+ -|..
T Consensus 115 ~EKPla 120 (350)
T 4had_A 115 CEKPLA 120 (350)
T ss_dssp ECSCCC
T ss_pred EeCCcc
Confidence 7 3553
No 173
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=30.53 E-value=1.6e+02 Score=21.51 Aligned_cols=70 Identities=14% Similarity=0.069 Sum_probs=41.9
Q ss_pred HHHHhhcCCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHh--hCceEEecCC----hHHHHHHHHhCCcEEE
Q 031484 6 YQMLMEKHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYA--AADLIVSRAG----AMTCYEILATGKPSIL 79 (159)
Q Consensus 6 ~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~--~ad~~i~~~G----~~t~~Eal~~g~P~I~ 79 (159)
...+.+.++++++.++... .+..++..+..+ +..+ .+..+++. .+|+++...- ...+.+++..|+++++
T Consensus 20 ~~~l~~~~~~~l~av~d~~-~~~~~~~a~~~g-~~~~---~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~ 94 (344)
T 3euw_A 20 AANIAANPDLELVVIADPF-IEGAQRLAEANG-AEAV---ASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALC 94 (344)
T ss_dssp HHHHHHCTTEEEEEEECSS-HHHHHHHHHTTT-CEEE---SSHHHHTTCSCCCEEEECSCGGGHHHHHHHHHHTTCCEEE
T ss_pred HHHHHhCCCcEEEEEECCC-HHHHHHHHHHcC-Ccee---CCHHHHhcCCCCCEEEEeCCchhhHHHHHHHHHcCCcEEE
Confidence 3445556888887676654 233333322222 3333 45677787 7898774332 2345778999999987
Q ss_pred e
Q 031484 80 I 80 (159)
Q Consensus 80 ~ 80 (159)
-
T Consensus 95 E 95 (344)
T 3euw_A 95 E 95 (344)
T ss_dssp C
T ss_pred E
Confidence 3
No 174
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=30.05 E-value=96 Score=18.87 Aligned_cols=106 Identities=12% Similarity=0.142 Sum_probs=53.2
Q ss_pred CCeeEEEEcCccc-HHHHHHHhhcCCCeEEecccc---cHHHHH---hhCceEEecC---C--hHHHHHHHH---hCCcE
Q 031484 13 HNLFIIWQTGVEA-FNEMESLVRNHPRLLLTPFLH---SMDLAY---AAADLIVSRA---G--AMTCYEILA---TGKPS 77 (159)
Q Consensus 13 ~~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~~---~~~~~l---~~ad~~i~~~---G--~~t~~Eal~---~g~P~ 77 (159)
+..+++++-.... ...+.+.+...+.+.+..... .+..+. ...|++|... + +..+++.+. ..+|+
T Consensus 19 ~~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~i 98 (146)
T 4dad_A 19 GMINILVASEDASRLAHLARLVGDAGRYRVTRTVGRAAQIVQRTDGLDAFDILMIDGAALDTAELAAIEKLSRLHPGLTC 98 (146)
T ss_dssp GGCEEEEECSCHHHHHHHHHHHHHHCSCEEEEECCCHHHHTTCHHHHTTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEE
T ss_pred CCCeEEEEeCCHHHHHHHHHHHhhCCCeEEEEeCCHHHHHHHHHhcCCCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcE
Confidence 4557766655542 445555554333344444332 122222 3568888632 3 222233322 36888
Q ss_pred EEecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhc
Q 031484 78 ILIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 78 I~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
|++... .... ......+.|. +++.++ .+.+.|...+.+++.
T Consensus 99 i~lt~~----~~~~-~~~~~~~~ga~~~l~Kp--~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 99 LLVTTD----ASSQ-TLLDAMRAGVRDVLRWP--LEPRALDDALKRAAA 140 (146)
T ss_dssp EEEESC----CCHH-HHHHHHTTTEEEEEESS--CCHHHHHHHHHHHHH
T ss_pred EEEeCC----CCHH-HHHHHHHhCCceeEcCC--CCHHHHHHHHHHHHh
Confidence 887432 1212 2222334454 445444 458899998888764
No 175
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=29.88 E-value=1.3e+02 Score=21.61 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=24.0
Q ss_pred cHHHHHh--hCceEEecCC----hHHHHHHHHhCCcEEEe-cC
Q 031484 47 SMDLAYA--AADLIVSRAG----AMTCYEILATGKPSILI-PS 82 (159)
Q Consensus 47 ~~~~~l~--~ad~~i~~~G----~~t~~Eal~~g~P~I~~-p~ 82 (159)
+..+++. .+|+++.... ...+.+++..|+++++- |.
T Consensus 60 ~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~eKP~ 102 (315)
T 3c1a_A 60 DWRSVVSAPEVEAVIIATPPATHAEITLAAIASGKAVLVEKPL 102 (315)
T ss_dssp STHHHHTCTTCCEEEEESCGGGHHHHHHHHHHTTCEEEEESSS
T ss_pred CHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEcCCC
Confidence 4567775 7898764222 23456788899999864 54
No 176
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=29.70 E-value=84 Score=27.12 Aligned_cols=54 Identities=15% Similarity=0.033 Sum_probs=34.9
Q ss_pred HHHHHHhhcCCCeE-Eeccc-ccHHHHHhhCceEEecCChHHHHH---HHHhCCcEEEe
Q 031484 27 NEMESLVRNHPRLL-LTPFL-HSMDLAYAAADLIVSRAGAMTCYE---ILATGKPSILI 80 (159)
Q Consensus 27 ~~l~~~~~~~~~v~-~~~~~-~~~~~~l~~ad~~i~~~G~~t~~E---al~~g~P~I~~ 80 (159)
++.+++.+..++++ +..-+ |+....|..|..+||.-|+.|.-- |=.+|+|.|+.
T Consensus 440 ~~~~~~~~~~~g~ILV~~~T~Pd~~p~M~~a~gIvT~~GG~TSHAAIvAR~LGIPaVVG 498 (913)
T 2x0s_A 440 ESAKEWSGRGKKVIMVRLETSPEDLAGMDAACGILTARGGMTSHAAVVARGMGKCCVSG 498 (913)
T ss_dssp HHHHHHTTTTCCEEEEESSCCTTSHHHHTTSSEEEESSCCTTCHHHHHHHTTTCCEEEC
T ss_pred hHHHHHhhCCCceEEEcCCCCHHHHHHHHHHHHHHHHccCCCChHHHHHHHcCCCeecC
Confidence 34444332234444 44433 788899999999999777655333 33599999974
No 177
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=29.43 E-value=98 Score=18.77 Aligned_cols=107 Identities=8% Similarity=0.013 Sum_probs=54.5
Q ss_pred CCeeEEEEcCccc-HHHHHHHhhcCC-C--eEEecccccHHHHHh--hCceEEecC---C--hHHHHHHHH-----hCCc
Q 031484 13 HNLFIIWQTGVEA-FNEMESLVRNHP-R--LLLTPFLHSMDLAYA--AADLIVSRA---G--AMTCYEILA-----TGKP 76 (159)
Q Consensus 13 ~~~~~~~~~G~~~-~~~l~~~~~~~~-~--v~~~~~~~~~~~~l~--~ad~~i~~~---G--~~t~~Eal~-----~g~P 76 (159)
...+++++-.... ...+...+...+ . +.......+..+.+. ..|++|... + +..+++.+. .++|
T Consensus 4 ~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (144)
T 3kht_A 4 RSKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTP 83 (144)
T ss_dssp -CEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCC
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Confidence 3457766655542 455555554332 3 333333334444443 467888632 1 233444443 4689
Q ss_pred EEEecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhc
Q 031484 77 SILIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 77 ~I~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
+|++... .... ......+.|. +++.++. .+.+.|.+.+.++++
T Consensus 84 ii~~s~~----~~~~-~~~~~~~~ga~~~l~Kp~-~~~~~l~~~i~~~l~ 127 (144)
T 3kht_A 84 IVILTDN----VSDD-RAKQCMAAGASSVVDKSS-NNVTDFYGRIYAIFS 127 (144)
T ss_dssp EEEEETT----CCHH-HHHHHHHTTCSEEEECCT-TSHHHHHHHHHHHHH
T ss_pred EEEEeCC----CCHH-HHHHHHHcCCCEEEECCC-CcHHHHHHHHHHHHH
Confidence 9987432 1212 2223334554 5555544 038899998888764
No 178
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=28.65 E-value=2.3e+02 Score=22.77 Aligned_cols=76 Identities=16% Similarity=0.122 Sum_probs=42.4
Q ss_pred hHHHHHhhcCCeeEE-EEcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhh----CceEEecCChH------HH
Q 031484 4 LYYQMLMEKHNLFII-WQTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAA----ADLIVSRAGAM------TC 67 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~-~~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~----ad~~i~~~G~~------t~ 67 (159)
.+.+.|... +++-+ .+-|.....-+..+.+..++++++...++ +.+-|+. --++++++|++ .+
T Consensus 16 ~l~~~L~~~-GV~~vfg~PG~~~~~l~dal~~~~~~i~~i~~~hE~~Aa~aA~GyAr~tg~~gv~~~TsGpG~~N~~~gi 94 (603)
T 4feg_A 16 AVIKVLEAW-GVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAADAKLTGKIGVCFGSAGPGGTHLMNGL 94 (603)
T ss_dssp HHHHHHHHT-TCCEEEECCCGGGHHHHHHHHHTTTTSEEEECSSHHHHHHHHHHHHHHHSSCEEEEECTTHHHHTTHHHH
T ss_pred HHHHHHHHC-CCCEEEEeCCCchHHHHHHHHhccCCCeEEEecChHHHHHHHHHHHHHhCCceEEEecCCchHHHHHHHH
Confidence 445555553 34433 34444333333333332246777765543 3333332 33577788843 48
Q ss_pred HHHHHhCCcEEEe
Q 031484 68 YEILATGKPSILI 80 (159)
Q Consensus 68 ~Eal~~g~P~I~~ 80 (159)
.||..-++|+|++
T Consensus 95 a~A~~~~vPvl~i 107 (603)
T 4feg_A 95 YDAREDHVPVLAL 107 (603)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 8999999999987
No 179
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=28.27 E-value=1.3e+02 Score=21.97 Aligned_cols=71 Identities=17% Similarity=0.127 Sum_probs=41.5
Q ss_pred HHhhcCCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhh--CceEEecCC----hHHHHHHHHhCCcEEE-e
Q 031484 8 MLMEKHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAA--ADLIVSRAG----AMTCYEILATGKPSIL-I 80 (159)
Q Consensus 8 ~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~--ad~~i~~~G----~~t~~Eal~~g~P~I~-~ 80 (159)
++...++++++.++....... +.....+++.++ .++.+++.. .|+++...- ...+.+++..|+++++ -
T Consensus 22 ~~~~~~~~~l~av~d~~~~~~--~~~~~~~~~~~~---~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EK 96 (345)
T 3f4l_A 22 VLNRKDSWHVAHIFRRHAKPE--EQAPIYSHIHFT---SDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEK 96 (345)
T ss_dssp HTTCTTTEEEEEEECSSCCGG--GGSGGGTTCEEE---SCTHHHHTCTTEEEEEECSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred HHhcCCCeEEEEEEcCCHhHH--HHHHhcCCCceE---CCHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHcCCcEEEeC
Confidence 445678888887777642111 112223445444 345667765 788764222 2346789999999997 3
Q ss_pred cCC
Q 031484 81 PSP 83 (159)
Q Consensus 81 p~~ 83 (159)
|..
T Consensus 97 P~a 99 (345)
T 3f4l_A 97 PFT 99 (345)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
No 180
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=28.14 E-value=1e+02 Score=18.56 Aligned_cols=106 Identities=15% Similarity=0.081 Sum_probs=50.7
Q ss_pred eeEEEEcCccc-HHHHHHHhhcCCCeEEecc--cccHHHHH--hhCceEEecC---C--hHHHHHHHH-----hCCcEEE
Q 031484 15 LFIIWQTGVEA-FNEMESLVRNHPRLLLTPF--LHSMDLAY--AAADLIVSRA---G--AMTCYEILA-----TGKPSIL 79 (159)
Q Consensus 15 ~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~--~~~~~~~l--~~ad~~i~~~---G--~~t~~Eal~-----~g~P~I~ 79 (159)
.+++++-.... ...+.+.+... ..+... ..+..+.+ ...|++|... | +..+++.+. ..+|+|+
T Consensus 4 ~~iLivdd~~~~~~~l~~~l~~~--~~v~~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ 81 (140)
T 3n53_A 4 KKILIIDQQDFSRIELKNFLDSE--YLVIESKNEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLIL 81 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTT--SEEEEESSHHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHhc--ceEEEeCCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEE
Confidence 45655544432 44555555433 333322 22333333 2458887532 1 223344443 5789988
Q ss_pred ecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhcCHHH
Q 031484 80 IPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILGNEAL 129 (159)
Q Consensus 80 ~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~~~~ 129 (159)
+... .. ........+.|. +++.++ .+.+.|.+.+..++....+
T Consensus 82 ~s~~----~~-~~~~~~~~~~g~~~~l~KP--~~~~~l~~~i~~~~~~~~~ 125 (140)
T 3n53_A 82 LFSS----EH-KEAIVNGLHSGADDYLTKP--FNRNDLLSRIEIHLRTQNY 125 (140)
T ss_dssp EECC---------CTTTTTTCCCSEEEESS--CCHHHHHHHHHHHHHHHHH
T ss_pred EecC----CC-HHHHHHHHhcCCCeeeeCC--CCHHHHHHHHHHHHhhHHH
Confidence 6432 11 111111223343 455544 4489999999988764433
No 181
>2ffj_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.45A {Archaeoglobus fulgidus} SCOP: e.50.1.1
Probab=28.12 E-value=65 Score=23.72 Aligned_cols=35 Identities=31% Similarity=0.418 Sum_probs=26.0
Q ss_pred ccHHHHHhhCceEEecCChHHHHHHHH--hCCcEEEecC
Q 031484 46 HSMDLAYAAADLIVSRAGAMTCYEILA--TGKPSILIPS 82 (159)
Q Consensus 46 ~~~~~~l~~ad~~i~~~G~~t~~Eal~--~g~P~I~~p~ 82 (159)
+++.+.++.||++|+++- +. +|.+. .+.|+...-.
T Consensus 241 ~el~~~l~~adLVI~KG~-~N-yr~L~~~~~~~i~~L~~ 277 (300)
T 2ffj_A 241 DETRKALEEADLIVAKGM-AN-YECLSDGSLKPIAFLLT 277 (300)
T ss_dssp HHHHHHHHHCSEEEEESH-HH-HHHHC---CCSEEEEEE
T ss_pred HHHHHHHccCCEEEEECC-hH-HHHHhCCCCcchHHHHH
Confidence 478899999999999853 44 67775 4789887643
No 182
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=28.07 E-value=1.8e+02 Score=21.35 Aligned_cols=58 Identities=16% Similarity=0.086 Sum_probs=33.3
Q ss_pred HHHHhhc----CCeeEEEEcCccc-HHHHHHHhhc-CCCeEEec-ccccHHHHHhhCceEEecCC
Q 031484 6 YQMLMEK----HNLFIIWQTGVEA-FNEMESLVRN-HPRLLLTP-FLHSMDLAYAAADLIVSRAG 63 (159)
Q Consensus 6 ~~~~~~~----~~~~~~~~~G~~~-~~~l~~~~~~-~~~v~~~~-~~~~~~~~l~~ad~~i~~~G 63 (159)
-++++++ .+-+++++++.+- -..+..++.. ...+.+.. ...++.+.++.||++|+..|
T Consensus 147 ~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg 211 (288)
T 1b0a_A 147 VTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVG 211 (288)
T ss_dssp HHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHHHCSEEEECSC
T ss_pred HHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHhccCCEEEECCC
Confidence 3445553 2445655544322 2333333333 23566554 44689999999999998766
No 183
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=27.82 E-value=99 Score=18.32 Aligned_cols=105 Identities=9% Similarity=0.045 Sum_probs=51.2
Q ss_pred eeEEEEcCccc-HHHHHHHhhcCCCeEEecccccHHHHHh--hCceEEecC---C--hHHHHHHHHh-----CCcEEEec
Q 031484 15 LFIIWQTGVEA-FNEMESLVRNHPRLLLTPFLHSMDLAYA--AADLIVSRA---G--AMTCYEILAT-----GKPSILIP 81 (159)
Q Consensus 15 ~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~~~~~~~l~--~ad~~i~~~---G--~~t~~Eal~~-----g~P~I~~p 81 (159)
.+++++-.... ...+...+...-.+.......+..+.+. ..|++|... + +..+++.+.. .+|+|++.
T Consensus 5 ~~ilivdd~~~~~~~l~~~l~~~~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s 84 (133)
T 3nhm_A 5 PKVLIVENSWTMRETLRLLLSGEFDCTTAADGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVS 84 (133)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTSEEEEESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEE
T ss_pred CEEEEEcCCHHHHHHHHHHHhCCcEEEEECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEe
Confidence 46666554432 4455555542113333322233334443 467887532 2 2333444432 78999874
Q ss_pred CCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhcCH
Q 031484 82 SPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILGNE 127 (159)
Q Consensus 82 ~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~~ 127 (159)
.. .... .. ...+.|. +++.++ ++++.|...+.+++...
T Consensus 85 ~~----~~~~-~~-~~~~~g~~~~l~KP--~~~~~l~~~i~~~l~~~ 123 (133)
T 3nhm_A 85 GY----APRT-EG-PADQPVPDAYLVKP--VKPPVLIAQLHALLARA 123 (133)
T ss_dssp SC----CC-------TTSCCCSEEEESS--CCHHHHHHHHHHHHHHH
T ss_pred CC----CcHh-HH-HHhhcCCceEEecc--CCHHHHHHHHHHHHhhh
Confidence 32 1111 12 2233343 455544 45899999999887643
No 184
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=27.75 E-value=2.1e+02 Score=21.96 Aligned_cols=73 Identities=14% Similarity=0.094 Sum_probs=42.2
Q ss_pred HHhhcCCeeEEEEcCcccHHHHHHHhhc-CCCeEEeccc--------------ccHHHHHh--hCceEEe----cCChHH
Q 031484 8 MLMEKHNLFIIWQTGVEAFNEMESLVRN-HPRLLLTPFL--------------HSMDLAYA--AADLIVS----RAGAMT 66 (159)
Q Consensus 8 ~~~~~~~~~~~~~~G~~~~~~l~~~~~~-~~~v~~~~~~--------------~~~~~~l~--~ad~~i~----~~G~~t 66 (159)
++++++.++++.+++..+.+.+.+..+. .+.+....-. ..+.++.. .+|+++. .+|-..
T Consensus 22 Vi~~~~~~~vvaL~a~~n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~~~l~el~~~~~~D~Vv~AivG~aGL~p 101 (376)
T 3a06_A 22 VLKKVKGIRLIGISFHSNLELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHSIEEMLEALKPDITMVAVSGFSGLRA 101 (376)
T ss_dssp HHHHSCSEEEEEEEESSCHHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEESTTHHHHHHHHHCCSEEEECCCSTTHHHH
T ss_pred HHHhCCCeEEEEEEccCCHHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCHHHHHHHhcCCCCCEEEEEeeCHHHHHH
Confidence 3444577888776555556666555432 3444322111 11345553 5888874 334445
Q ss_pred HHHHHHhCCcEEEe
Q 031484 67 CYEILATGKPSILI 80 (159)
Q Consensus 67 ~~Eal~~g~P~I~~ 80 (159)
.++|+-.|+.+.+.
T Consensus 102 tlaAi~aGK~vaLA 115 (376)
T 3a06_A 102 VLASLEHSKRVCLA 115 (376)
T ss_dssp HHHHHHHCSEEEEC
T ss_pred HHHHHHCCCEEEEe
Confidence 67899999999874
No 185
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=27.68 E-value=1.4e+02 Score=19.84 Aligned_cols=101 Identities=10% Similarity=0.030 Sum_probs=49.4
Q ss_pred eEEEEcCccc-HHHHHHHhhcCCCeEEecccccHHHHH---hhCceEEec---CC--hHHHHHHHH---hCCcEEEecCC
Q 031484 16 FIIWQTGVEA-FNEMESLVRNHPRLLLTPFLHSMDLAY---AAADLIVSR---AG--AMTCYEILA---TGKPSILIPSP 83 (159)
Q Consensus 16 ~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~~~~~~~l---~~ad~~i~~---~G--~~t~~Eal~---~g~P~I~~p~~ 83 (159)
+++++..... ...+...+...+ .+... .+..+.+ ...|++|.. ++ +..+++.+. ..+|+|++...
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~~--~v~~~-~~~~~al~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~ 80 (220)
T 1p2f_A 4 KIAVVDDDKNILKKVSEKLQQLG--RVKTF-LTGEDFLNDEEAFHVVVLDVMLPDYSGYEICRMIKETRPETWVILLTLL 80 (220)
T ss_dssp EEEEECSCHHHHHHHHHHHTTTE--EEEEE-SSHHHHHHCCSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEESC
T ss_pred eEEEEeCCHHHHHHHHHHHHhCC--CEEEE-CCHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEEcC
Confidence 4555544432 445555554333 22222 2222333 467888752 22 222334332 47899887432
Q ss_pred CCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhc
Q 031484 84 NVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 84 ~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
.+.......+...-.+++..+- +.+.+...+..++.
T Consensus 81 ----~~~~~~~~~~~~ga~~~l~Kp~--~~~~L~~~i~~~~~ 116 (220)
T 1p2f_A 81 ----SDDESVLKGFEAGADDYVTKPF--NPEILLARVKRFLE 116 (220)
T ss_dssp ----CSHHHHHHHHHHTCSEEEESSC--CHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHcCCCEEEECCC--CHHHHHHHHHHHHc
Confidence 1212223333333346665543 48889888887753
No 186
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=27.59 E-value=1.4e+02 Score=19.87 Aligned_cols=67 Identities=15% Similarity=0.079 Sum_probs=36.1
Q ss_pred hCceEEecCC--hHHHHHHHH--h-CCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhcC
Q 031484 54 AADLIVSRAG--AMTCYEILA--T-GKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILGN 126 (159)
Q Consensus 54 ~ad~~i~~~G--~~t~~Eal~--~-g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~~ 126 (159)
..|++| .++ +..+++.+. . .+|+|++... .+.......+...-.+++..+- .+++.+...+..++..
T Consensus 44 ~~dlvi-lp~~~g~~~~~~lr~~~~~~~ii~lt~~----~~~~~~~~~~~~Ga~~~l~Kp~-~~~~~L~~~i~~~~~~ 115 (223)
T 2hqr_A 44 NYDLVM-VSDKNALSFVSRIKEKHSSIVVLVSSDN----PTSEEEVHAFEQGADDYIAKPY-RSIKALVARIEARLRF 115 (223)
T ss_dssp CCSEEE-ECCTTHHHHHHHHHHHCTTSEEEEEESS----CCHHHHHHHHHHTCSEEEETTC-SCTHHHHHHHHHHTSS
T ss_pred CCCEEE-eCCCCHHHHHHHHHhCCCCCcEEEEECC----CCHHHHHHHHHcCCCEEEECCC-CCHHHHHHHHHHHhcc
Confidence 357887 544 222333332 3 7889887432 1222223333333346665543 0388999999888754
No 187
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=27.43 E-value=1.7e+02 Score=21.68 Aligned_cols=58 Identities=14% Similarity=0.146 Sum_probs=33.3
Q ss_pred HHHHhhc----CCeeEEEEcCccc-HHHHHHHhh-cCCCeEEec-ccccHHHHHhhCceEEecCC
Q 031484 6 YQMLMEK----HNLFIIWQTGVEA-FNEMESLVR-NHPRLLLTP-FLHSMDLAYAAADLIVSRAG 63 (159)
Q Consensus 6 ~~~~~~~----~~~~~~~~~G~~~-~~~l~~~~~-~~~~v~~~~-~~~~~~~~l~~ad~~i~~~G 63 (159)
-++++++ .+-+++++++.+- =..+..++. ....|.+.. ...++.+.++.||++|+..|
T Consensus 153 ~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg 217 (301)
T 1a4i_A 153 LELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATG 217 (301)
T ss_dssp HHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHTTCSEEEECCC
T ss_pred HHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHHHhccCCEEEECCC
Confidence 3455553 2445655544421 122323222 223566664 45689999999999998766
No 188
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=27.37 E-value=1.1e+02 Score=18.46 Aligned_cols=106 Identities=8% Similarity=-0.023 Sum_probs=52.6
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcCC-CeEEecccccHHHHHh--hCceEEecC---C--hHHHHHHHH-----hCCcEEE
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNHP-RLLLTPFLHSMDLAYA--AADLIVSRA---G--AMTCYEILA-----TGKPSIL 79 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~~-~v~~~~~~~~~~~~l~--~ad~~i~~~---G--~~t~~Eal~-----~g~P~I~ 79 (159)
..+++++-.... ...+++.+...+ .+.......+..+.+. ..|++|... + +..+++.+. ..+|+|+
T Consensus 6 ~~~iLivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~ 85 (140)
T 3grc_A 6 RPRILICEDDPDIARLLNLMLEKGGFDSDMVHSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVV 85 (140)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEE
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHCCCeEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEE
Confidence 456766655442 445555554322 2333322233334443 457887532 2 333445444 3789998
Q ss_pred ecCCCCCCchHHHHHH-HHHHcCc-eeeeccCCCChhHHHHHHHHHhcC
Q 031484 80 IPSPNVAEGHQFKNAS-LMAKLAD-SRIITEDELDSITLETTIEEILGN 126 (159)
Q Consensus 80 ~p~~~~~~~~q~~~~~-~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~ 126 (159)
+... ....... ...+.|. +++.++ .+.+.|...+.++++.
T Consensus 86 ~s~~-----~~~~~~~~~~~~~g~~~~l~kP--~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 86 VSAN-----AREGELEFNSQPLAVSTWLEKP--IDENLLILSLHRAIDN 127 (140)
T ss_dssp ECTT-----HHHHHHHHCCTTTCCCEEECSS--CCHHHHHHHHHHHHHH
T ss_pred EecC-----CChHHHHHHhhhcCCCEEEeCC--CCHHHHHHHHHHHHHh
Confidence 7432 2111111 1223343 444443 4589999999888753
No 189
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=27.36 E-value=1.4e+02 Score=19.99 Aligned_cols=58 Identities=14% Similarity=0.041 Sum_probs=33.4
Q ss_pred cCcccHHHHHHHhhcCC-CeEEecccccHHHHHhhCceEEecCCh--HH----------HHHHHHhCCcEEEecC
Q 031484 21 TGVEAFNEMESLVRNHP-RLLLTPFLHSMDLAYAAADLIVSRAGA--MT----------CYEILATGKPSILIPS 82 (159)
Q Consensus 21 ~G~~~~~~l~~~~~~~~-~v~~~~~~~~~~~~l~~ad~~i~~~G~--~t----------~~Eal~~g~P~I~~p~ 82 (159)
.|..+...+.+.++... .+.++.. ++.+..+|.+|.++|+ .. +-++...|+|++-+-.
T Consensus 10 ~g~~n~~si~~al~~~G~~~~v~~~----~~~l~~~D~lilPG~g~~~~~~~~~~~~~~i~~~~~~~~PvlGICl 80 (211)
T 4gud_A 10 TGCANISSVKFAIERLGYAVTISRD----PQVVLAADKLFLPGVGTASEAMKNLTERDLIELVKRVEKPLLGICL 80 (211)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEECC----HHHHHHCSEEEECCCSCHHHHHHHHHHTTCHHHHHHCCSCEEEETH
T ss_pred CCCChHHHHHHHHHHCCCEEEEECC----HHHHhCCCEEEECCCCCHHHHHHHHHhcChHHHHHHcCCCEEEEch
Confidence 45555555655554332 4555432 3557789999986532 11 2234457999998744
No 190
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=27.13 E-value=1e+02 Score=18.35 Aligned_cols=109 Identities=7% Similarity=0.007 Sum_probs=53.8
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcCC-CeEEecccccHHHHHh--h-CceEEecC---C--hHHHHHHHH----hCCcEEE
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNHP-RLLLTPFLHSMDLAYA--A-ADLIVSRA---G--AMTCYEILA----TGKPSIL 79 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~~-~v~~~~~~~~~~~~l~--~-ad~~i~~~---G--~~t~~Eal~----~g~P~I~ 79 (159)
..+++++-.... ...+.+.+...+ .+.......+....+. . .|++|... + +..+++.+. ..+|+|+
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~ 86 (136)
T 3hdv_A 7 RPLVLVVDDNAVNREALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIV 86 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCCEEEESSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCceEEEeCCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEE
Confidence 456766655442 445555554322 3333322233333343 2 57887532 2 333444443 4578887
Q ss_pred ecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhcCHHH
Q 031484 80 IPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILGNEAL 129 (159)
Q Consensus 80 ~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~~~~ 129 (159)
+... .... ......+.|. +++.++ .+.+.|...+.+......+
T Consensus 87 ~s~~----~~~~-~~~~~~~~g~~~~l~KP--~~~~~l~~~i~~~~~~~~~ 130 (136)
T 3hdv_A 87 VSGD----TDVE-EAVDVMHLGVVDFLLKP--VDLGKLLELVNKELKIGEG 130 (136)
T ss_dssp EESS----CCHH-HHHHHHHTTCSEEEESS--CCHHHHHHHHHHHHC----
T ss_pred EeCC----CChH-HHHHHHhCCcceEEeCC--CCHHHHHHHHHHHhcCchh
Confidence 6432 1212 2223334454 555554 4489999999988875543
No 191
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=26.62 E-value=2.1e+02 Score=21.65 Aligned_cols=29 Identities=17% Similarity=0.212 Sum_probs=20.1
Q ss_pred CceEEecCChHHHHH---HHH--h------------------CCcEEEecCCC
Q 031484 55 ADLIVSRAGAMTCYE---ILA--T------------------GKPSILIPSPN 84 (159)
Q Consensus 55 ad~~i~~~G~~t~~E---al~--~------------------g~P~I~~p~~~ 84 (159)
+|++|+=+|+. ++. +++ + ++|+|.+|...
T Consensus 110 ~D~IIavGGGS-~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTTa 161 (375)
T 3rf7_A 110 PVSVVGLGGGS-TMDLAKAVSLMLTNPGSSSEYQGWDLIKNPAVHHIGIPTVS 161 (375)
T ss_dssp CSEEEEEESHH-HHHHHHHHHHHTSSCSCGGGGCEESCCCSCCCCEEEEESSC
T ss_pred CCEEEEeCCcH-HHHHHHHHHHHHhCCCCHHHhhccccccCCCCCEEEEcCCC
Confidence 89999976643 333 222 2 79999999864
No 192
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2
Probab=26.43 E-value=66 Score=24.23 Aligned_cols=81 Identities=12% Similarity=0.088 Sum_probs=42.3
Q ss_pred hHHHHHhhcCCeeEEEEcCcccH-----HHHHHHhhcCCCeEEeccc--c---cHHHHHh----hCceEEecCChHHHHH
Q 031484 4 LYYQMLMEKHNLFIIWQTGVEAF-----NEMESLVRNHPRLLLTPFL--H---SMDLAYA----AADLIVSRAGAMTCYE 69 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~G~~~~-----~~l~~~~~~~~~v~~~~~~--~---~~~~~l~----~ad~~i~~~G~~t~~E 69 (159)
.+.+.++... -++++++++... +++.+.++. .++.+.-|. + ++.+... .+|++|+=+|+ +++.
T Consensus 32 ~l~~~l~~~g-~~~liVtd~~~~~~~~~~~v~~~L~~-~g~~~~~~~ge~~~~~v~~~~~~~~~~~d~IIavGGG-sv~D 108 (376)
T 1kq3_A 32 ILEEELSRFG-ERAFVVIDDFVDKNVLGENFFSSFTK-VRVNKQIFGGECSDEEIERLSGLVEEETDVVVGIGGG-KTLD 108 (376)
T ss_dssp GHHHHHHTTC-SEEEEEECHHHHHHTTCTTGGGGCSS-SEEEEEECCSSCBHHHHHHHHTTCCTTCCEEEEEESH-HHHH
T ss_pred HHHHHHHHcC-CeEEEEECccHHhhccHHHHHHHHHH-cCCeEEEeCCCCCHHHHHHHHHHHhcCCCEEEEeCCc-HHHH
Confidence 3445555544 478888887522 222222211 123333222 1 2223322 67999986664 3334
Q ss_pred -----HHHhCCcEEEecCCCCCC
Q 031484 70 -----ILATGKPSILIPSPNVAE 87 (159)
Q Consensus 70 -----al~~g~P~I~~p~~~~~~ 87 (159)
+...|+|+|.+|....++
T Consensus 109 ~aK~iA~~~~~p~i~IPTTa~tg 131 (376)
T 1kq3_A 109 TAKAVAYKLKKPVVIVPTIASTD 131 (376)
T ss_dssp HHHHHHHHTTCCEEEEESSCCCS
T ss_pred HHHHHHHhcCCCEEEecCccccC
Confidence 234699999999864444
No 193
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=25.53 E-value=2.5e+02 Score=22.21 Aligned_cols=75 Identities=15% Similarity=0.162 Sum_probs=41.4
Q ss_pred hhHHHHHhhcCCeeEE-EEcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhhC----ceEEecCCh------HH
Q 031484 3 NLYYQMLMEKHNLFII-WQTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAAA----DLIVSRAGA------MT 66 (159)
Q Consensus 3 ~~~~~~~~~~~~~~~~-~~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~a----d~~i~~~G~------~t 66 (159)
+.+.+.|... +++-+ .+-|.....-+..+.. ++++++...+| +.+-|+.+ -++++++|+ +.
T Consensus 12 ~~l~~~L~~~-GV~~vfg~PG~~~~~l~~al~~--~~i~~i~~~hE~~Aa~~A~Gyar~tg~pgv~~~TsGpG~~N~~~g 88 (564)
T 2q28_A 12 HIIVEALKQN-NIDTIYGVVGIPVTDMARHAQA--EGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTA 88 (564)
T ss_dssp HHHHHHHHHT-TCCEEEECCCTTTHHHHHHHHH--TTCEEEECSSHHHHHHHHHHHHHHHSSCEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCEEEECCCcchHHHHHHHHh--CCCcEEeeCCHHHHHHHHHHHHHHhCCCEEEEEccCchHHHHHHH
Confidence 3445555553 44433 3444433332222222 34776665543 33333332 467778874 34
Q ss_pred HHHHHHhCCcEEEe
Q 031484 67 CYEILATGKPSILI 80 (159)
Q Consensus 67 ~~Eal~~g~P~I~~ 80 (159)
+.||..-++|+|++
T Consensus 89 i~~A~~~~vPll~i 102 (564)
T 2q28_A 89 LANATVNGFPMIMI 102 (564)
T ss_dssp HHHHHHHTCCEEEE
T ss_pred HHHHHhcCCCEEEE
Confidence 78999999999997
No 194
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=25.12 E-value=2e+02 Score=21.03 Aligned_cols=71 Identities=11% Similarity=0.088 Sum_probs=42.5
Q ss_pred HHHHHhhcCCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhh--CceEEecCC----hHHHHHHHHhCCcEE
Q 031484 5 YYQMLMEKHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAA--ADLIVSRAG----AMTCYEILATGKPSI 78 (159)
Q Consensus 5 ~~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~--ad~~i~~~G----~~t~~Eal~~g~P~I 78 (159)
....+...++++++.++.....+++.+.+. .+++..+ .++.+++.. .|+++-... ...+.+++..|++++
T Consensus 18 ~~~~l~~~~~~~l~av~d~~~~~~~a~~~~-~~~~~~~---~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl 93 (349)
T 3i23_A 18 HLPYVMIRETLEVKTIFDLHVNEKAAAPFK-EKGVNFT---ADLNELLTDPEIELITICTPAHTHYDLAKQAILAGKSVI 93 (349)
T ss_dssp THHHHTTCTTEEEEEEECTTCCHHHHHHHH-TTTCEEE---SCTHHHHSCTTCCEEEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred HHHHHhhCCCeEEEEEECCCHHHHHHHhhC-CCCCeEE---CCHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHcCCEEE
Confidence 344566678888887777653233332221 2445544 345566764 788764222 234578999999999
Q ss_pred E
Q 031484 79 L 79 (159)
Q Consensus 79 ~ 79 (159)
+
T Consensus 94 ~ 94 (349)
T 3i23_A 94 V 94 (349)
T ss_dssp E
T ss_pred E
Confidence 7
No 195
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=25.10 E-value=2.5e+02 Score=22.09 Aligned_cols=75 Identities=12% Similarity=0.131 Sum_probs=41.0
Q ss_pred hHHHHHhhcCCeeEEE-EcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHh---hCceEEecCCh------HHHH
Q 031484 4 LYYQMLMEKHNLFIIW-QTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYA---AADLIVSRAGA------MTCY 68 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~---~ad~~i~~~G~------~t~~ 68 (159)
.+.+.|.+. +++.++ +-|.....-+..+.+ .++++++...+| +.+-|+ .--++++++|+ +.+.
T Consensus 10 ~l~~~L~~~-GV~~vfg~PG~~~~~l~~al~~-~~~i~~i~~~~E~~A~~~A~Gyar~tg~~v~~~tsGpG~~N~~~gv~ 87 (552)
T 1ovm_A 10 YLLDRLTDC-GADHLFGVPGDYNLQFLDHVID-SPDICWVGCANELNASYAADGYARCKGFAALLTTFGVGELSAMNGIA 87 (552)
T ss_dssp HHHHHHHHT-TCCEEEECCCGGGHHHHHHHHH-CSSCEEEECSSHHHHHHHHHHHHHHHSCEEEEEETTHHHHHTHHHHH
T ss_pred HHHHHHHHc-CCCEEEECCChhHHHHHHHHhc-CCCceEEeeCcHHHHHHHHHHHHHhhCCcEEEEccCCcHHHHHHHHH
Confidence 444555553 445433 334433333333322 345776655543 333332 22356677874 3478
Q ss_pred HHHHhCCcEEEe
Q 031484 69 EILATGKPSILI 80 (159)
Q Consensus 69 Eal~~g~P~I~~ 80 (159)
||..-++|+|++
T Consensus 88 ~A~~~~~Pll~i 99 (552)
T 1ovm_A 88 GSYAEHVPVLHI 99 (552)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHhhhcCCEEEE
Confidence 999999999997
No 196
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=25.02 E-value=1.6e+02 Score=19.75 Aligned_cols=103 Identities=9% Similarity=0.067 Sum_probs=49.3
Q ss_pred eEEEEcCccc-HHHHHHHhhcCCCeEEecccc---cHHHHHh--hCceEEec---CC--hHHHHHHH---HhCCcEEEec
Q 031484 16 FIIWQTGVEA-FNEMESLVRNHPRLLLTPFLH---SMDLAYA--AADLIVSR---AG--AMTCYEIL---ATGKPSILIP 81 (159)
Q Consensus 16 ~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~~---~~~~~l~--~ad~~i~~---~G--~~t~~Eal---~~g~P~I~~p 81 (159)
+++++-.... ...+...+...+.+.+..... +....+. ..|++|.. +| +..+++.+ ...+|+|++.
T Consensus 3 ~ILivdd~~~~~~~l~~~L~~~~~~~vv~~~~~~~~al~~l~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt 82 (225)
T 3c3w_A 3 KVFLVDDHEVVRRGLVDLLGADPELDVVGEAGSVAEAMARVPAARPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILT 82 (225)
T ss_dssp EEEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHCCSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGG
T ss_pred EEEEEcCCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhcCCCEEEEeCCCCCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 4555544332 445555554434455433222 2223332 46888753 22 22333433 2478888864
Q ss_pred CCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhc
Q 031484 82 SPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 82 ~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
.. .......+.+ +.|. +++.++-+ .+.|...+..++.
T Consensus 83 ~~----~~~~~~~~~~-~~Ga~~~l~Kp~~--~~~L~~~i~~~~~ 120 (225)
T 3c3w_A 83 SY----TSDEAMLDAI-LAGASGYVVKDIK--GMELARAVKDVGA 120 (225)
T ss_dssp GS----SSHHHHHHHH-HHTCCCHHHHHHH--HHHHHHHHHHHHH
T ss_pred CC----CCHHHHHHHH-HCCCCEEEECCCC--HHHHHHHHHHHHc
Confidence 32 1212222333 3444 55554433 7788888887764
No 197
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=25.00 E-value=1.7e+02 Score=19.98 Aligned_cols=68 Identities=13% Similarity=0.140 Sum_probs=38.2
Q ss_pred eEEEEcCc-ccHHHHHHH---hhc---CCCeEEeccc---ccHHHHHhh-----CceEEecCC---hHHHHHHHHhCCcE
Q 031484 16 FIIWQTGV-EAFNEMESL---VRN---HPRLLLTPFL---HSMDLAYAA-----ADLIVSRAG---AMTCYEILATGKPS 77 (159)
Q Consensus 16 ~~~~~~G~-~~~~~l~~~---~~~---~~~v~~~~~~---~~~~~~l~~-----ad~~i~~~G---~~t~~Eal~~g~P~ 77 (159)
++.++.|. .+.+-.++. ++. .-.+.+.+-. +.+.++.+. ++++|+-+| ...-.=+...-+||
T Consensus 23 ~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PV 102 (182)
T 1u11_A 23 VVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPV 102 (182)
T ss_dssp SEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCSSCE
T ss_pred EEEEEECcHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCchhhhHHHHHhccCCCE
Confidence 45555665 454433332 222 1234555432 356667654 689887554 22223466689999
Q ss_pred EEecCC
Q 031484 78 ILIPSP 83 (159)
Q Consensus 78 I~~p~~ 83 (159)
|-+|..
T Consensus 103 IgVP~~ 108 (182)
T 1u11_A 103 LGVPVE 108 (182)
T ss_dssp EEEEEC
T ss_pred EEeeCC
Confidence 999885
No 198
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=24.65 E-value=1.4e+02 Score=18.80 Aligned_cols=74 Identities=12% Similarity=0.088 Sum_probs=38.7
Q ss_pred cHHHHHhhCc--eEEecCC-hHHHHHHHH-hCCcEEEecCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHH
Q 031484 47 SMDLAYAAAD--LIVSRAG-AMTCYEILA-TGKPSILIPSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEE 122 (159)
Q Consensus 47 ~~~~~l~~ad--~~i~~~G-~~t~~Eal~-~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ 122 (159)
.+-+++..-+ ++|+.+- ..+...++. .+.|.|++.....+ + ....+...+.|..+.....+ .-..+..+.+
T Consensus 43 ~~~~~~~~~~~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~--~-~~i~~~A~~~~ipvl~t~~~--T~~~~~~l~~ 117 (139)
T 2ioj_A 43 SALRYLREARNAALVTGGDRSDLLLTALEMPNVRCLILTGNLEP--V-QLVLTKAEERGVPVILTGHD--TLTAVSRLES 117 (139)
T ss_dssp HHHHHHHTCSSEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCC--C-HHHHHHHHHHTCCEEECSSC--HHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCC--C-HHHHHHHHHCCCeEEEECCC--HHHHHHHHHH
Confidence 3445555545 7777332 344445554 68888877543211 1 22234455566665544433 5556666665
Q ss_pred Hhc
Q 031484 123 ILG 125 (159)
Q Consensus 123 ll~ 125 (159)
++.
T Consensus 118 ~l~ 120 (139)
T 2ioj_A 118 VFG 120 (139)
T ss_dssp TCS
T ss_pred Hhc
Confidence 543
No 199
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=24.43 E-value=1.9e+02 Score=20.43 Aligned_cols=47 Identities=11% Similarity=0.157 Sum_probs=27.2
Q ss_pred CCCeEEeccc---ccHHHHHh-hCceEEe--cC-Ch-HHHHHHHHhCCcEEEecC
Q 031484 36 HPRLLLTPFL---HSMDLAYA-AADLIVS--RA-GA-MTCYEILATGKPSILIPS 82 (159)
Q Consensus 36 ~~~v~~~~~~---~~~~~~l~-~ad~~i~--~~-G~-~t~~Eal~~g~P~I~~p~ 82 (159)
.++..+.+.. +++.+++. .+|++|= .+ .. ..+..++..|+|+++...
T Consensus 23 ~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTT 77 (245)
T 1p9l_A 23 ADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTT 77 (245)
T ss_dssp CTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCC
Confidence 3455555433 34556665 7899882 22 22 223346778999998543
No 200
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=24.24 E-value=2.3e+02 Score=21.32 Aligned_cols=73 Identities=14% Similarity=0.223 Sum_probs=36.6
Q ss_pred HHHHHhhcCCeeEEEEcCcccH-HHHHHHhhcC-CCeEEecccccHHHHHhhCceEEecCChHHHHHHHH--hCCcEEE
Q 031484 5 YYQMLMEKHNLFIIWQTGVEAF-NEMESLVRNH-PRLLLTPFLHSMDLAYAAADLIVSRAGAMTCYEILA--TGKPSIL 79 (159)
Q Consensus 5 ~~~~~~~~~~~~~~~~~G~~~~-~~l~~~~~~~-~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~Eal~--~g~P~I~ 79 (159)
+.++|..+|..++..+...... ..+.+.+... ..+.+... +..++...+|++++..|.....|... .|+.+|=
T Consensus 29 llrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~--~~~~~~~~~Dvvf~alp~~~s~~~~~~~~g~~VID 105 (351)
T 1vkn_A 29 LVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEF--DPEKVSKNCDVLFTALPAGASYDLVRELKGVKIID 105 (351)
T ss_dssp HHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCC--CHHHHHHHCSEEEECCSTTHHHHHHTTCCSCEEEE
T ss_pred HHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeC--CHHHhhcCCCEEEECCCcHHHHHHHHHhCCCEEEE
Confidence 4566777788887776654211 1111111110 23333332 23455688999987665333333222 5666553
No 201
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=23.89 E-value=1.2e+02 Score=18.06 Aligned_cols=106 Identities=5% Similarity=-0.045 Sum_probs=51.5
Q ss_pred CCeeEEEEcCccc-HHHHHHHhhcCCCeEEeccc--ccHHHHH--hhCceEEec---CC--hHHHHHHHH---hCCcEEE
Q 031484 13 HNLFIIWQTGVEA-FNEMESLVRNHPRLLLTPFL--HSMDLAY--AAADLIVSR---AG--AMTCYEILA---TGKPSIL 79 (159)
Q Consensus 13 ~~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~--~~~~~~l--~~ad~~i~~---~G--~~t~~Eal~---~g~P~I~ 79 (159)
...+++++-.... ...+...+...+.+.+..+. .+..+.+ ...|++|.. ++ +..+++.+. ..+|+|+
T Consensus 13 ~~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 92 (135)
T 3snk_A 13 KRKQVALFSSDPNFKRDVATRLDALAIYDVRVSETDDFLKGPPADTRPGIVILDLGGGDLLGKPGIVEARALWATVPLIA 92 (135)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHHHTSSEEEEEECGGGGGGCCCTTCCCSEEEEEEETTGGGGSTTHHHHHGGGTTCCEEE
T ss_pred CCcEEEEEcCCHHHHHHHHHHHhhcCCeEEEEeccHHHHHHHHhccCCCEEEEeCCCCCchHHHHHHHHHhhCCCCcEEE
Confidence 3456766655442 44555555433214444222 2222222 246787752 22 112233332 3689998
Q ss_pred ecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhc
Q 031484 80 IPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 80 ~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
+... .... ......+.|. +++.++ ++++.|...+.+++.
T Consensus 93 ~s~~----~~~~-~~~~~~~~g~~~~l~KP--~~~~~L~~~i~~~~~ 132 (135)
T 3snk_A 93 VSDE----LTSE-QTRVLVRMNASDWLHKP--LDGKELLNAVTFHDT 132 (135)
T ss_dssp EESC----CCHH-HHHHHHHTTCSEEEESS--CCHHHHHHHHHHTC-
T ss_pred EeCC----CCHH-HHHHHHHcCcHhhccCC--CCHHHHHHHHHHHhc
Confidence 7432 1222 2222334444 555554 448999998887764
No 202
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=23.89 E-value=2e+02 Score=21.42 Aligned_cols=75 Identities=12% Similarity=0.087 Sum_probs=39.3
Q ss_pred HHHHHhhcCCeeEEEEcCcc---cH-HHHHHHh---hcCCCeEEecccccHHHHHhhCceEEecCChHHHH----HHHHh
Q 031484 5 YYQMLMEKHNLFIIWQTGVE---AF-NEMESLV---RNHPRLLLTPFLHSMDLAYAAADLIVSRAGAMTCY----EILAT 73 (159)
Q Consensus 5 ~~~~~~~~~~~~~~~~~G~~---~~-~~l~~~~---~~~~~v~~~~~~~~~~~~l~~ad~~i~~~G~~t~~----Eal~~ 73 (159)
+.++|..+|++.+..+.... .. ..+.+.+ +...++.+... ++..+++..+|+++...|..... +++..
T Consensus 20 l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~-~~~~~~~~~~Dvvf~a~p~~~s~~~~~~~~~~ 98 (337)
T 3dr3_A 20 LVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM-SDISEFSPGVDVVFLATAHEVSHDLAPQFLEA 98 (337)
T ss_dssp HHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE-SSGGGTCTTCSEEEECSCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc-CCHHHHhcCCCEEEECCChHHHHHHHHHHHHC
Confidence 34566677888877665543 11 1222211 11113444432 02224448899999766644323 34567
Q ss_pred CCcEEEe
Q 031484 74 GKPSILI 80 (159)
Q Consensus 74 g~P~I~~ 80 (159)
|+.+|-.
T Consensus 99 g~~vIDl 105 (337)
T 3dr3_A 99 GCVVFDL 105 (337)
T ss_dssp TCEEEEC
T ss_pred CCEEEEc
Confidence 8887754
No 203
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=23.72 E-value=1.2e+02 Score=18.02 Aligned_cols=106 Identities=13% Similarity=0.110 Sum_probs=53.2
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcCCCeEEec--ccccHHHHHh--hCceEEec---C-----C--hHHHHHHH---HhCC
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNHPRLLLTP--FLHSMDLAYA--AADLIVSR---A-----G--AMTCYEIL---ATGK 75 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~--~~~~~~~~l~--~ad~~i~~---~-----G--~~t~~Eal---~~g~ 75 (159)
..+++++..... ...+...+... ++.+.. ...+....+. ..|++|.. + + +..+++.+ ...+
T Consensus 3 ~~~ilivdd~~~~~~~l~~~L~~~-g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~ 81 (140)
T 2qr3_A 3 LGTIIIVDDNKGVLTAVQLLLKNH-FSKVITLSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDL 81 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTT-SSEEEEECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTC
T ss_pred CceEEEEeCCHHHHHHHHHHHHhC-CcEEEEeCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCC
Confidence 346666655432 44555555432 333332 2233444444 35777742 1 2 22233333 2478
Q ss_pred cEEEecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhcCH
Q 031484 76 PSILIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILGNE 127 (159)
Q Consensus 76 P~I~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~~ 127 (159)
|+|++... ..........+.|. +++..+ .+.+.|...+..++...
T Consensus 82 ~ii~ls~~-----~~~~~~~~~~~~g~~~~l~kp--~~~~~l~~~l~~~~~~~ 127 (140)
T 2qr3_A 82 PVVLFTAY-----ADIDLAVRGIKEGASDFVVKP--WDNQKLLETLLNAASQA 127 (140)
T ss_dssp CEEEEEEG-----GGHHHHHHHHHTTCCEEEEES--CCHHHHHHHHHHHHTCC
T ss_pred CEEEEECC-----CCHHHHHHHHHcCchheeeCC--CCHHHHHHHHHHHHHhc
Confidence 99986321 11222223344554 555554 34889999999887643
No 204
>2wx4_A DCP1, decapping protein 1; asymmetric assembly, trimerization module, mRNA decapping, P-BODY component, structural protein; 2.80A {Drosophila melanogaster}
Probab=23.43 E-value=74 Score=16.47 Aligned_cols=28 Identities=7% Similarity=0.160 Sum_probs=19.8
Q ss_pred CCCChhHHHHHHHHHhc-CHHHHHHHHHH
Q 031484 109 DELDSITLETTIEEILG-NEALMAEMSER 136 (159)
Q Consensus 109 ~~~~~~~l~~~l~~ll~-~~~~~~~~~~~ 136 (159)
+.++.+++.+++..++. |+++...+-+.
T Consensus 7 ~~Ltk~Ql~qal~hLiknD~~Fl~~iHeA 35 (46)
T 2wx4_A 7 LLLNSTQFVQAFTYLIQNDKEFANKLHKA 35 (46)
T ss_dssp GSTTSHHHHHHHHHHHHHCTTHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 34567899999998885 66666555554
No 205
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=23.39 E-value=2.1e+02 Score=20.56 Aligned_cols=37 Identities=11% Similarity=0.099 Sum_probs=26.4
Q ss_pred ccHHHHHhhCceEEecCCh----HHHHHHHHhCCcEEEecC
Q 031484 46 HSMDLAYAAADLIVSRAGA----MTCYEILATGKPSILIPS 82 (159)
Q Consensus 46 ~~~~~~l~~ad~~i~~~G~----~t~~Eal~~g~P~I~~p~ 82 (159)
.++.+++..+|++|--+.+ ..+..++..|+|+|+...
T Consensus 65 ~dl~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTT 105 (272)
T 4f3y_A 65 DDIERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTT 105 (272)
T ss_dssp CCHHHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECCC
T ss_pred CCHHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 4577788899999843332 234568889999998644
No 206
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=23.33 E-value=2.3e+02 Score=20.91 Aligned_cols=70 Identities=14% Similarity=0.072 Sum_probs=41.0
Q ss_pred HHHHhhcCCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhh--CceEEecCC----hHHHHHHHHhCCcEEE
Q 031484 6 YQMLMEKHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAA--ADLIVSRAG----AMTCYEILATGKPSIL 79 (159)
Q Consensus 6 ~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~--ad~~i~~~G----~~t~~Eal~~g~P~I~ 79 (159)
...+...++++++.++.... +++ .+..+.+..+ .++.+++.. .|+++-..- ...+..++..|+++++
T Consensus 22 ~~~l~~~~~~~l~av~d~~~-~~~---~~~~~~~~~~---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~ 94 (362)
T 3fhl_A 22 APFISTNPHFELYKIVERSK-ELS---KERYPQASIV---RSFKELTEDPEIDLIVVNTPDNTHYEYAGMALEAGKNVVV 94 (362)
T ss_dssp HHHHHHCTTEEEEEEECSSC-CGG---GTTCTTSEEE---SCSHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhCCCeEEEEEEcCCH-HHH---HHhCCCCceE---CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEE
Confidence 34456667888877776542 111 1122344443 345677765 788763222 2346789999999997
Q ss_pred e-cC
Q 031484 80 I-PS 82 (159)
Q Consensus 80 ~-p~ 82 (159)
= |.
T Consensus 95 EKP~ 98 (362)
T 3fhl_A 95 EKPF 98 (362)
T ss_dssp ESSC
T ss_pred ecCC
Confidence 3 54
No 207
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=23.17 E-value=2.3e+02 Score=20.88 Aligned_cols=70 Identities=16% Similarity=0.181 Sum_probs=42.3
Q ss_pred HHHHhhcCCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHh--hCceEEe-cC-C--hHHHHHHHHhCCcEEE
Q 031484 6 YQMLMEKHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYA--AADLIVS-RA-G--AMTCYEILATGKPSIL 79 (159)
Q Consensus 6 ~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~--~ad~~i~-~~-G--~~t~~Eal~~g~P~I~ 79 (159)
...+...++++++.++.... +++.+. .+.+.++ .++.+++. ..|+++- .+ . .-.+.+++..|+++++
T Consensus 22 ~~~l~~~~~~~l~av~d~~~-~~~~~~---~~~~~~~---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~ 94 (358)
T 3gdo_A 22 GPLLDVLDEYQISKIMTSRT-EEVKRD---FPDAEVV---HELEEITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVM 94 (358)
T ss_dssp HHHHTTCTTEEEEEEECSCH-HHHHHH---CTTSEEE---SSTHHHHTCTTCCEEEECSCTTTHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhCCCeEEEEEEcCCH-HHHHhh---CCCCceE---CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEE
Confidence 44566678888877776653 333222 2344444 34566776 6788763 22 2 3346789999999997
Q ss_pred e-cC
Q 031484 80 I-PS 82 (159)
Q Consensus 80 ~-p~ 82 (159)
= |.
T Consensus 95 EKPl 98 (358)
T 3gdo_A 95 EKPM 98 (358)
T ss_dssp ESSC
T ss_pred ecCC
Confidence 3 44
No 208
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=22.74 E-value=2.5e+02 Score=21.22 Aligned_cols=28 Identities=21% Similarity=0.391 Sum_probs=19.4
Q ss_pred CceEEecCChHHHHH---HH----HhCCcEEEecCC
Q 031484 55 ADLIVSRAGAMTCYE---IL----ATGKPSILIPSP 83 (159)
Q Consensus 55 ad~~i~~~G~~t~~E---al----~~g~P~I~~p~~ 83 (159)
+|++|+-+|+.+ .. +. ..|+|+|.+|..
T Consensus 104 ~d~IIavGGGsv-~D~ak~~Aa~~~rgip~i~IPTT 138 (368)
T 3qbe_A 104 KDALVSLGGGAA-TDVAGFAAATWLRGVSIVHLPTT 138 (368)
T ss_dssp TCEEEEEESHHH-HHHHHHHHHHGGGCCEEEEEECS
T ss_pred CcEEEEECChHH-HHHHHHHHHHhccCCcEEEECCC
Confidence 699998766432 33 22 269999999974
No 209
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=22.65 E-value=17 Score=26.40 Aligned_cols=29 Identities=21% Similarity=0.356 Sum_probs=20.0
Q ss_pred hCceEEe-------------cCCh-HHHHHHHHhCCcEEEecC
Q 031484 54 AADLIVS-------------RAGA-MTCYEILATGKPSILIPS 82 (159)
Q Consensus 54 ~ad~~i~-------------~~G~-~t~~Eal~~g~P~I~~p~ 82 (159)
.-|++|| .||+ +..+|+..+|+|.|++..
T Consensus 93 ~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 135 (261)
T 3ty2_A 93 MPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSL 135 (261)
T ss_dssp CCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEE
T ss_pred CCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEc
Confidence 4699986 2343 225788999999998754
No 210
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=22.43 E-value=2.4e+02 Score=21.03 Aligned_cols=69 Identities=6% Similarity=0.055 Sum_probs=34.5
Q ss_pred hcCCeeEEEEcCcccHHH-HH-HHhhcCCCeEEecccc-cHHHHHhhCceEEe-------------cCChHH-HHHHHHh
Q 031484 11 EKHNLFIIWQTGVEAFNE-ME-SLVRNHPRLLLTPFLH-SMDLAYAAADLIVS-------------RAGAMT-CYEILAT 73 (159)
Q Consensus 11 ~~~~~~~~~~~G~~~~~~-l~-~~~~~~~~v~~~~~~~-~~~~~l~~ad~~i~-------------~~G~~t-~~Eal~~ 73 (159)
.....++++.-+++..+- +- ..+.. .+|.++=..+ -...+|..+|.+|. +.|+-. .+=|-.+
T Consensus 164 ~gk~~~V~v~EtRP~~qGrltA~eL~~-~GI~vtlI~Dsa~~~~M~~Vd~VivGAd~V~anG~v~NKiGT~~lAl~Ak~~ 242 (338)
T 3a11_A 164 QGKDIKVIVTETRPKWQGKITAKELAS-YGIPVIYVVDSAARHYMKMTDKVVMGADSITVNGAVINKIGTALIALTAKEH 242 (338)
T ss_dssp TTCCCEEEEECCTTTTHHHHHHHHHHH-TTCCEEEECGGGTTTTGGGCSEEEECCSEECTTSCEEEETTHHHHHHHHHHT
T ss_pred CCCeEEEEEeCCCCchhhHHHHHHHHh-CCCCEEEEehHHHHHHHHhCCEEEECccEEecCCCEeecccHHHHHHHHHHc
Confidence 335567766666554322 11 11221 2333222222 24455788888773 224322 3335668
Q ss_pred CCcEEEe
Q 031484 74 GKPSILI 80 (159)
Q Consensus 74 g~P~I~~ 80 (159)
|+|+++.
T Consensus 243 ~vPfyV~ 249 (338)
T 3a11_A 243 RVWTMIA 249 (338)
T ss_dssp TCEEEEE
T ss_pred CCCEEEe
Confidence 9999986
No 211
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=22.28 E-value=1.4e+02 Score=18.26 Aligned_cols=105 Identities=13% Similarity=0.061 Sum_probs=54.3
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcCCCeEEecc--cccHHHHHh--hCceEEec---CC--hHHHHHHH---HhCCcEEEe
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNHPRLLLTPF--LHSMDLAYA--AADLIVSR---AG--AMTCYEIL---ATGKPSILI 80 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~--~~~~~~~l~--~ad~~i~~---~G--~~t~~Eal---~~g~P~I~~ 80 (159)
..+++++-.... ...+.+.+... ++.+... ..+....+. ..|++|.. ++ +..+++.+ ...+|+|++
T Consensus 14 ~~~ILivdd~~~~~~~l~~~L~~~-g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~ 92 (153)
T 3hv2_A 14 RPEILLVDSQEVILQRLQQLLSPL-PYTLHFARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILL 92 (153)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTS-SCEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHhccc-CcEEEEECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEE
Confidence 456766655543 45555555433 3333322 223334443 46888752 22 22333333 247899887
Q ss_pred cCCCCCCchHHHHHHHHHHcC--ceeeeccCCCChhHHHHHHHHHhcC
Q 031484 81 PSPNVAEGHQFKNASLMAKLA--DSRIITEDELDSITLETTIEEILGN 126 (159)
Q Consensus 81 p~~~~~~~~q~~~~~~~~~~~--~g~~~~~~~~~~~~l~~~l~~ll~~ 126 (159)
... .... ......+.| .+++.++ ++.+.|...+.+++..
T Consensus 93 s~~----~~~~-~~~~~~~~g~~~~~l~KP--~~~~~l~~~i~~~l~~ 133 (153)
T 3hv2_A 93 TGD----PDLK-LIAKAINEGEIYRYLSKP--WDDQELLLALRQALEH 133 (153)
T ss_dssp CCC----CCHH-HHHHHHHTTCCSEEECSS--CCHHHHHHHHHHHHHH
T ss_pred ECC----CCHH-HHHHHHhCCCcceEEeCC--CCHHHHHHHHHHHHHH
Confidence 432 2222 222334455 3555554 4489999999888753
No 212
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=21.73 E-value=44 Score=22.50 Aligned_cols=33 Identities=27% Similarity=0.293 Sum_probs=22.0
Q ss_pred HHHHHhhCceEEecCChH-----HHHHHHH--hCCcEEEe
Q 031484 48 MDLAYAAADLIVSRAGAM-----TCYEILA--TGKPSILI 80 (159)
Q Consensus 48 ~~~~l~~ad~~i~~~G~~-----t~~Eal~--~g~P~I~~ 80 (159)
+.+++..+|++|+.+|.+ -+.|+++ +|+++..-
T Consensus 56 l~~a~~~~DlVittGG~g~~~~D~T~ea~a~~~~~~l~~~ 95 (172)
T 3kbq_A 56 FRVALEVSDLVVSSGGLGPTFDDMTVEGFAKCIGQDLRID 95 (172)
T ss_dssp HHHHHHHCSEEEEESCCSSSTTCCHHHHHHHHHTCCCEEC
T ss_pred HHHHHhcCCEEEEcCCCcCCcccchHHHHHHHcCCCeeeC
Confidence 455566799999988722 1356554 78887764
No 213
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=21.42 E-value=1.8e+02 Score=21.49 Aligned_cols=57 Identities=18% Similarity=0.203 Sum_probs=32.5
Q ss_pred HHHHhhcC----CeeEEEEcCccc--HHHHHHHhhc-CCCeEEe-cccccHHHHHhhCceEEecCC
Q 031484 6 YQMLMEKH----NLFIIWQTGVEA--FNEMESLVRN-HPRLLLT-PFLHSMDLAYAAADLIVSRAG 63 (159)
Q Consensus 6 ~~~~~~~~----~~~~~~~~G~~~--~~~l~~~~~~-~~~v~~~-~~~~~~~~~l~~ad~~i~~~G 63 (159)
-++|+++. .-++ ++.|++. =..+..++.. .-.|.+. ..+.++.++.+.||++|+..|
T Consensus 167 ~~lL~~~~i~l~Gk~v-vViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~~~~ADIvV~A~G 231 (303)
T 4b4u_A 167 MTILKENNIEIAGKHA-VVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPELVKQADIIVGAVG 231 (303)
T ss_dssp HHHHHHTTCCCTTCEE-EEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHHTCSEEEECSC
T ss_pred HHHHHHHCCCCCCCEE-EEEeccccccchHHHHHHhcCCEEEEecCCCCCHHHHhhcCCeEEeccC
Confidence 45566542 2245 4557653 2233333322 2344443 455789999999999998766
No 214
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=21.35 E-value=3.1e+02 Score=21.72 Aligned_cols=75 Identities=15% Similarity=0.181 Sum_probs=41.0
Q ss_pred hHHHHHhhcCCeeEEE-EcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhh----CceEEecCChH------HH
Q 031484 4 LYYQMLMEKHNLFIIW-QTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAA----ADLIVSRAGAM------TC 67 (159)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~----ad~~i~~~G~~------t~ 67 (159)
.+.+.|... +++-++ +-|.....-+..+.+ .++++++...+| +.+-|+. --++++++|++ .+
T Consensus 13 ~lv~~L~~~-GV~~vFg~PG~~~~~l~dal~~-~~~i~~i~~~hE~~Aa~~AdGyAr~tG~pgv~~~TsGpG~~N~~~gi 90 (556)
T 3hww_A 13 VILEALTRH-GVRHICIAPGSRSTLLTLAAAE-NSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPAL 90 (556)
T ss_dssp HHHHHHHTT-TCCEEEECCCTTSHHHHHHHHH-CTTCEEEECSCHHHHHHHHHHHHHHHCSCEEEEECSSHHHHTTHHHH
T ss_pred HHHHHHHHC-CCCEEEEcCCCCcHHHHHHHhh-CCCceEEEecCCcHHHHHHHHHHHhhCCCEEEEECCCcHHHhhhHHH
Confidence 344455543 444333 344433333333322 345666554443 4444432 34567778843 48
Q ss_pred HHHHHhCCcEEEe
Q 031484 68 YEILATGKPSILI 80 (159)
Q Consensus 68 ~Eal~~g~P~I~~ 80 (159)
.||..-++|+|++
T Consensus 91 a~A~~d~vPll~i 103 (556)
T 3hww_A 91 IEAGLTGEKLILL 103 (556)
T ss_dssp HHHHHHCCCEEEE
T ss_pred HHHHHhCCCeEEE
Confidence 8999999999987
No 215
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=21.22 E-value=1.7e+02 Score=18.77 Aligned_cols=105 Identities=5% Similarity=-0.009 Sum_probs=52.0
Q ss_pred CeeEEEEcCccc-HHHHHHHhhcCCCeEEeccc--ccHHHHHh--hCceEEec---CC--hHHHHHHH---HhCCcEEEe
Q 031484 14 NLFIIWQTGVEA-FNEMESLVRNHPRLLLTPFL--HSMDLAYA--AADLIVSR---AG--AMTCYEIL---ATGKPSILI 80 (159)
Q Consensus 14 ~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~--~~~~~~l~--~ad~~i~~---~G--~~t~~Eal---~~g~P~I~~ 80 (159)
..+++++-.... ...+...+... +..+.... .+..+.+. ..|++|.. +| +..+++.+ ...+|+|++
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~-g~~v~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~l 85 (184)
T 3rqi_A 7 DKNFLVIDDNEVFAGTLARGLERR-GYAVRQAHNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVL 85 (184)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHT-TCEEEEECSHHHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHC-CCEEEEeCCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEE
Confidence 456766554432 44455544432 23333222 23334443 35888753 22 22333433 347899887
Q ss_pred cCCCCCCchHHHHHHHHHHcCceeeeccCCCChhHHHHHHHHHhc
Q 031484 81 PSPNVAEGHQFKNASLMAKLADSRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 81 p~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
... .......+.+.....+++.++- +.+.|...+..++.
T Consensus 86 t~~----~~~~~~~~a~~~Ga~~~l~KP~--~~~~L~~~i~~~~~ 124 (184)
T 3rqi_A 86 TGY----ASIATAVQAVKDGADNYLAKPA--NVESILAALQTNAS 124 (184)
T ss_dssp ESS----CCHHHHHHHHHHTCSEEEESSC--CHHHHHHHTSTTHH
T ss_pred eCC----CCHHHHHHHHHhCHHHheeCCC--CHHHHHHHHHHHHH
Confidence 432 1222222333333346666554 48888888877664
No 216
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=20.96 E-value=3.1e+02 Score=21.66 Aligned_cols=74 Identities=12% Similarity=0.173 Sum_probs=40.3
Q ss_pred hHHHHHhhcCCee-EEEEcCcccHHHHHHHhhcCCCeEEeccccc-----HHHHHhh----CceEEecCCh------HHH
Q 031484 4 LYYQMLMEKHNLF-IIWQTGVEAFNEMESLVRNHPRLLLTPFLHS-----MDLAYAA----ADLIVSRAGA------MTC 67 (159)
Q Consensus 4 ~~~~~~~~~~~~~-~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~----ad~~i~~~G~------~t~ 67 (159)
.+.+.|... +++ ++.+-|.....-+..+.+. +++++...+| +.+-|+. --++++++|+ +.+
T Consensus 9 ~l~~~L~~~-GV~~vfg~PG~~~~~l~~al~~~--~i~~i~~~~E~~Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~~l 85 (563)
T 2uz1_A 9 LVVRTLIKA-GVEHLFGLHGAHIDTIFQACLDH--DVPIIDTRHEAAAGHAAEGYARAGAKLGVALVTAGGGFTNAVTPI 85 (563)
T ss_dssp HHHHHHHHH-TCCCEEECCCGGGHHHHHHHHHH--TCCEEECSSHHHHHHHHHHHHHHHTSCEEEEECTTHHHHTTHHHH
T ss_pred HHHHHHHHC-CCCEEEECCCCchHHHHHHHHhc--CCcEEeeCCHHHHHHHHHHHHHHhCCCEEEEEccCccHHHHHHHH
Confidence 444555553 333 3334454433322332222 2555554443 4443432 3456778884 458
Q ss_pred HHHHHhCCcEEEe
Q 031484 68 YEILATGKPSILI 80 (159)
Q Consensus 68 ~Eal~~g~P~I~~ 80 (159)
.||...++|+|++
T Consensus 86 ~~A~~~~~Pll~i 98 (563)
T 2uz1_A 86 ANAWLDRTPVLFL 98 (563)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHhcCCCEEEE
Confidence 9999999999987
No 217
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=20.71 E-value=1.5e+02 Score=17.79 Aligned_cols=106 Identities=10% Similarity=0.120 Sum_probs=54.9
Q ss_pred CCeeEEEEcCccc-HHHHHHHhhcCC---CeEEecccccHHHHHh------------hCceEEecC---C--hHHHHHHH
Q 031484 13 HNLFIIWQTGVEA-FNEMESLVRNHP---RLLLTPFLHSMDLAYA------------AADLIVSRA---G--AMTCYEIL 71 (159)
Q Consensus 13 ~~~~~~~~~G~~~-~~~l~~~~~~~~---~v~~~~~~~~~~~~l~------------~ad~~i~~~---G--~~t~~Eal 71 (159)
...+++++..... ...+.+.+...+ .+.......+....+. ..|++|... + +..+++.+
T Consensus 5 ~~~~iLivdd~~~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l 84 (149)
T 1k66_A 5 ATQPLLVVEDSDEDFSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQEI 84 (149)
T ss_dssp TTSCEEEECCCHHHHHHHHHHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHHH
T ss_pred CCccEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHHHH
Confidence 3456766655442 445555554322 3444443344455554 358887532 2 23334444
Q ss_pred H-----hCCcEEEecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhc
Q 031484 72 A-----TGKPSILIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 72 ~-----~g~P~I~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
. ..+|+|++... .. ........+.|. +++.++ ++.+.|...+.+++.
T Consensus 85 ~~~~~~~~~~ii~~t~~----~~-~~~~~~~~~~g~~~~l~kP--~~~~~l~~~i~~~~~ 137 (149)
T 1k66_A 85 KQDEVLKKIPVVIMTTS----SN-PKDIEICYSYSISSYIVKP--LEIDRLTETVQTFIK 137 (149)
T ss_dssp TTSTTGGGSCEEEEESC----CC-HHHHHHHHHTTCSEEEECC--SSHHHHHHHHHHHHH
T ss_pred HhCcccCCCeEEEEeCC----CC-HHHHHHHHHCCCCEEEeCC--CCHHHHHHHHHHHHH
Confidence 3 46889887432 11 112223334454 555544 348889888887753
No 218
>3onk_A Epsin-3, ENT3; helix, protein transport; 2.09A {Saccharomyces cerevisiae} PDB: 3onl_A
Probab=20.62 E-value=1.2e+02 Score=19.89 Aligned_cols=30 Identities=20% Similarity=0.232 Sum_probs=22.1
Q ss_pred hHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 031484 114 ITLETTIEEILGNEALMAEMSERALKAAKP 143 (159)
Q Consensus 114 ~~l~~~l~~ll~~~~~~~~~~~~~~~~~~~ 143 (159)
..-++.|..|+.|+++.++-++++++....
T Consensus 117 R~kak~l~~LL~D~e~L~~eR~ka~~~~~k 146 (150)
T 3onk_A 117 RTRVKALIELLSDDNKIRAERKKARETAKK 146 (150)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 446777889999999998888888776543
No 219
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=20.56 E-value=3.3e+02 Score=21.76 Aligned_cols=76 Identities=11% Similarity=0.095 Sum_probs=42.8
Q ss_pred hhHHHHHhhcCCeeEEEE-cCcccHHHHHHHhhcC-CCeEEeccccc-----HHHHHhhC----ceEEecCCh------H
Q 031484 3 NLYYQMLMEKHNLFIIWQ-TGVEAFNEMESLVRNH-PRLLLTPFLHS-----MDLAYAAA----DLIVSRAGA------M 65 (159)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~-~G~~~~~~l~~~~~~~-~~v~~~~~~~~-----~~~~l~~a----d~~i~~~G~------~ 65 (159)
+.+.+.|.+. +++.++. -|..... +-..+... +.++++...++ +..-|+.+ -++++++|+ +
T Consensus 8 ~~lv~~L~~~-GV~~vfg~PG~~~~~-l~~al~~~~~~i~~i~~~~E~~Aa~~A~GyAr~tgk~~v~~~tsGpG~~N~~~ 85 (590)
T 1v5e_A 8 LAVMKILESW-GADTIYGIPSGTLSS-LMDAMGEEENNVKFLQVKHEEVGAMAAVMQSKFGGNLGVTVGSGGPGASHLIN 85 (590)
T ss_dssp HHHHHHHHHT-TCCEEEECCCTTTHH-HHTTSSSTTCCCEEEECSSHHHHHHHHHHHHHTTCCCCEEEECTTHHHHTTHH
T ss_pred HHHHHHHHHc-CCCEEEEecCCchHH-HHHHHHhcCCCCeEEeeCCHHHHHHHHHHHHHHHCCCEEEEeCcChHHHHHHH
Confidence 3445555553 4554443 3433333 32223223 45776665543 44444433 356777873 3
Q ss_pred HHHHHHHhCCcEEEe
Q 031484 66 TCYEILATGKPSILI 80 (159)
Q Consensus 66 t~~Eal~~g~P~I~~ 80 (159)
.+.||..-++|+|++
T Consensus 86 gl~~A~~~~vPll~I 100 (590)
T 1v5e_A 86 GLYDAAMDNIPVVAI 100 (590)
T ss_dssp HHHHHHHHTCCEEEE
T ss_pred HHHHHHhcCCCEEEE
Confidence 588999999999987
No 220
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=20.30 E-value=2.7e+02 Score=20.58 Aligned_cols=68 Identities=13% Similarity=0.013 Sum_probs=38.0
Q ss_pred cCCeeEEEEcCcccHHHHHHHhhcCCCeEEecccccHHHHHhh--CceEEecCC----hHHHHHHHHhCCcEEE-ecCC
Q 031484 12 KHNLFIIWQTGVEAFNEMESLVRNHPRLLLTPFLHSMDLAYAA--ADLIVSRAG----AMTCYEILATGKPSIL-IPSP 83 (159)
Q Consensus 12 ~~~~~~~~~~G~~~~~~l~~~~~~~~~v~~~~~~~~~~~~l~~--ad~~i~~~G----~~t~~Eal~~g~P~I~-~p~~ 83 (159)
.++++++.++... .+..++..+..+...++ .++.+++.. .|+++-..- ...+.+++..|+++++ -|..
T Consensus 48 ~~~~~lvav~d~~-~~~a~~~a~~~~~~~~~---~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla 122 (361)
T 3u3x_A 48 RAGARLAGFHEKD-DALAAEFSAVYADARRI---ATAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGM 122 (361)
T ss_dssp HTTCEEEEEECSC-HHHHHHHHHHSSSCCEE---SCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSC
T ss_pred cCCcEEEEEEcCC-HHHHHHHHHHcCCCccc---CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCC
Confidence 3677777676654 22222222222222222 356677765 788764222 2346789999999997 3543
No 221
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=20.26 E-value=1.6e+02 Score=17.99 Aligned_cols=106 Identities=13% Similarity=0.114 Sum_probs=55.6
Q ss_pred CCeeEEEEcCccc-HHHHHHHhhcCCCeEEecccc---cHHHHHh--hCceEEecC---C--hHHHHHHHH---hCCcEE
Q 031484 13 HNLFIIWQTGVEA-FNEMESLVRNHPRLLLTPFLH---SMDLAYA--AADLIVSRA---G--AMTCYEILA---TGKPSI 78 (159)
Q Consensus 13 ~~~~~~~~~G~~~-~~~l~~~~~~~~~v~~~~~~~---~~~~~l~--~ad~~i~~~---G--~~t~~Eal~---~g~P~I 78 (159)
...+++++..... ...+...+....++.+.+... +....+. ..|++|... + +..+++.+. ..+|+|
T Consensus 4 ~~~~ILivdd~~~~~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii 83 (153)
T 3cz5_A 4 STARIMLVDDHPIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARIL 83 (153)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHTTSTTEEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEE
T ss_pred cccEEEEECCcHHHHHHHHHHHhhCCCcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEE
Confidence 3456766655543 455555554434555553232 3334443 368887532 2 223334332 478998
Q ss_pred EecCCCCCCchHHHHHHHHHHcCc-eeeeccCCCChhHHHHHHHHHhc
Q 031484 79 LIPSPNVAEGHQFKNASLMAKLAD-SRIITEDELDSITLETTIEEILG 125 (159)
Q Consensus 79 ~~p~~~~~~~~q~~~~~~~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~ 125 (159)
++... .... ......+.|. +++..+ .+.+.|...+..++.
T Consensus 84 ~ls~~----~~~~-~~~~~~~~g~~~~l~kp--~~~~~L~~~i~~~~~ 124 (153)
T 3cz5_A 84 IFTMH----QGSA-FALKAFEAGASGYVTKS--SDPAELVQAIEAILA 124 (153)
T ss_dssp EEESC----CSHH-HHHHHHHTTCSEEEETT--SCTTHHHHHHHHHTT
T ss_pred EEECC----CCHH-HHHHHHHCCCcEEEecC--CCHHHHHHHHHHHHh
Confidence 87432 1212 2223334454 555554 347899999998876
No 222
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=20.23 E-value=2.4e+02 Score=20.60 Aligned_cols=26 Identities=31% Similarity=0.416 Sum_probs=20.3
Q ss_pred CeEEec-ccccHHHHHhhCceEEecCC
Q 031484 38 RLLLTP-FLHSMDLAYAAADLIVSRAG 63 (159)
Q Consensus 38 ~v~~~~-~~~~~~~~l~~ad~~i~~~G 63 (159)
.+.+.. ++.++.+..+.||++|+..|
T Consensus 187 tVtv~hs~T~~L~~~~~~ADIVI~Avg 213 (286)
T 4a5o_A 187 TVTVTHRFTRDLADHVSRADLVVVAAG 213 (286)
T ss_dssp EEEEECTTCSCHHHHHHTCSEEEECCC
T ss_pred eEEEEeCCCcCHHHHhccCCEEEECCC
Confidence 565554 45789999999999998666
No 223
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=20.21 E-value=1.5e+02 Score=17.64 Aligned_cols=28 Identities=4% Similarity=0.083 Sum_probs=18.3
Q ss_pred HHHcCc-eeeeccCCCChhHHHHHHHHHhcC
Q 031484 97 MAKLAD-SRIITEDELDSITLETTIEEILGN 126 (159)
Q Consensus 97 ~~~~~~-g~~~~~~~~~~~~l~~~l~~ll~~ 126 (159)
..+.|. +++.++- +.+.+.+.+.+++..
T Consensus 101 ~~~~ga~~~l~KP~--~~~~L~~~l~~~~~~ 129 (136)
T 1dcf_A 101 CMSFGLDGVLLKPV--SLDNIRDVLSDLLEP 129 (136)
T ss_dssp HHHTTCCEEEESSC--CHHHHHHHHHHHHSC
T ss_pred HHHcCCCeEEECCC--CHHHHHHHHHHHhch
Confidence 334554 5665543 488999988887653
Done!