Query 031491
Match_columns 158
No_of_seqs 148 out of 1015
Neff 4.2
Searched_HMMs 46136
Date Fri Mar 29 14:52:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031491.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031491hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02640 glucose-6-phosphate 1 100.0 1.6E-31 3.4E-36 246.4 10.2 139 1-157 1-147 (573)
2 PLN02333 glucose-6-phosphate 1 99.8 6.7E-21 1.4E-25 177.1 11.0 65 94-158 113-177 (604)
3 PF00479 G6PD_N: Glucose-6-pho 99.8 1.6E-21 3.5E-26 157.1 4.9 56 102-157 1-56 (183)
4 PRK05722 glucose-6-phosphate 1 99.8 2.6E-19 5.6E-24 163.2 7.9 65 93-157 4-68 (495)
5 PRK12854 glucose-6-phosphate 1 99.8 3.5E-19 7.7E-24 162.2 7.8 62 96-157 9-70 (484)
6 PRK12853 glucose-6-phosphate 1 99.8 3.7E-19 8.1E-24 161.9 7.9 62 96-157 6-67 (482)
7 TIGR00871 zwf glucose-6-phosph 99.8 3.4E-19 7.3E-24 162.1 7.5 61 97-157 1-61 (482)
8 PLN02539 glucose-6-phosphate 1 99.8 5.6E-19 1.2E-23 161.1 7.9 65 93-157 12-77 (491)
9 COG0364 Zwf Glucose-6-phosphat 99.8 5.7E-19 1.2E-23 160.7 7.6 61 95-155 4-64 (483)
10 KOG0563 Glucose-6-phosphate 1- 99.7 2.2E-18 4.8E-23 156.5 7.1 65 94-158 13-77 (499)
11 PTZ00309 glucose-6-phosphate 1 99.7 8.8E-18 1.9E-22 154.9 7.3 60 97-156 53-114 (542)
12 PF13905 Thioredoxin_8: Thiore 85.5 4 8.6E-05 27.8 6.1 55 99-154 3-57 (95)
13 cd03011 TlpA_like_ScsD_MtbDsbE 82.5 4.2 9E-05 28.8 5.3 50 98-153 21-70 (123)
14 PLN00141 Tic62-NAD(P)-related 73.6 3.1 6.8E-05 33.4 2.7 36 97-141 16-51 (251)
15 PRK07326 short chain dehydroge 69.1 3.4 7.5E-05 32.1 1.9 44 99-151 7-50 (237)
16 PRK05653 fabG 3-ketoacyl-(acyl 68.4 5.3 0.00011 30.8 2.8 44 99-151 6-49 (246)
17 PRK07454 short chain dehydroge 65.8 4.8 0.0001 31.6 2.2 44 99-151 7-50 (241)
18 COG3311 AlpA Predicted transcr 65.6 11 0.00023 26.9 3.7 40 115-155 26-65 (70)
19 PRK07523 gluconate 5-dehydroge 61.9 6.5 0.00014 31.2 2.3 44 99-151 11-54 (255)
20 PRK12429 3-hydroxybutyrate deh 61.4 7.9 0.00017 30.3 2.7 43 100-151 6-48 (258)
21 PF02670 DXP_reductoisom: 1-de 60.4 26 0.00057 27.2 5.4 46 101-154 1-46 (129)
22 PRK13394 3-hydroxybutyrate deh 59.5 9.2 0.0002 30.1 2.7 45 99-152 8-52 (262)
23 PRK12828 short chain dehydroge 58.4 10 0.00022 29.1 2.8 39 99-146 8-46 (239)
24 TIGR01764 excise DNA binding d 57.8 10 0.00022 22.5 2.2 33 117-152 16-48 (49)
25 cd02966 TlpA_like_family TlpA- 57.1 53 0.0011 21.6 6.7 56 97-153 19-74 (116)
26 PRK07774 short chain dehydroge 56.5 10 0.00022 29.7 2.6 43 100-151 8-50 (250)
27 PRK07231 fabG 3-ketoacyl-(acyl 54.7 11 0.00024 29.4 2.4 43 99-150 6-48 (251)
28 PRK06914 short chain dehydroge 54.3 13 0.00027 30.0 2.8 40 100-148 5-44 (280)
29 cd03009 TryX_like_TryX_NRX Try 52.8 55 0.0012 23.5 5.8 53 98-151 19-72 (131)
30 PF13460 NAD_binding_10: NADH( 52.7 8.7 0.00019 28.9 1.5 15 101-115 1-15 (183)
31 cd02964 TryX_like_family Trypa 50.0 69 0.0015 23.3 5.9 56 97-153 17-73 (132)
32 PRK09291 short chain dehydroge 49.5 34 0.00073 26.9 4.5 41 100-149 4-44 (257)
33 PRK07074 short chain dehydroge 48.7 14 0.00031 29.2 2.2 41 100-149 4-44 (257)
34 PRK08945 putative oxoacyl-(acy 48.4 14 0.00029 29.2 2.1 45 98-151 12-56 (247)
35 PRK06124 gluconate 5-dehydroge 48.1 15 0.00033 29.0 2.3 35 98-141 11-45 (256)
36 PF05368 NmrA: NmrA-like famil 47.7 11 0.00024 29.7 1.5 20 101-121 1-20 (233)
37 PRK07478 short chain dehydroge 47.7 16 0.00034 29.0 2.3 44 99-151 7-50 (254)
38 PRK06949 short chain dehydroge 47.5 16 0.00034 28.8 2.3 34 99-141 10-43 (258)
39 PRK05875 short chain dehydroge 47.4 15 0.00033 29.4 2.3 35 99-142 8-42 (276)
40 cd02969 PRX_like1 Peroxiredoxi 47.3 84 0.0018 23.9 6.3 56 97-153 25-86 (171)
41 PRK08703 short chain dehydroge 47.2 28 0.0006 27.3 3.7 44 99-151 7-50 (239)
42 PRK05565 fabG 3-ketoacyl-(acyl 44.5 21 0.00045 27.6 2.5 42 100-150 7-49 (247)
43 PLN03209 translocon at the inn 43.6 19 0.0004 34.6 2.5 40 99-147 81-120 (576)
44 PRK06138 short chain dehydroge 42.6 20 0.00044 27.9 2.2 40 99-147 6-45 (252)
45 PRK08017 oxidoreductase; Provi 42.5 19 0.00041 28.3 2.1 33 100-141 4-36 (256)
46 cd03008 TryX_like_RdCVF Trypar 42.3 94 0.002 24.3 5.9 56 97-153 25-86 (146)
47 PRK09242 tropinone reductase; 42.1 21 0.00045 28.3 2.3 43 99-150 10-52 (257)
48 TIGR03206 benzo_BadH 2-hydroxy 41.8 22 0.00047 27.8 2.3 39 100-147 5-43 (250)
49 cd01078 NAD_bind_H4MPT_DH NADP 41.7 57 0.0012 25.4 4.7 44 98-150 28-71 (194)
50 PRK12384 sorbitol-6-phosphate 41.5 27 0.00059 27.6 2.9 43 100-151 4-46 (259)
51 PRK06125 short chain dehydroge 40.9 22 0.00048 28.3 2.3 44 99-151 8-51 (259)
52 PRK07062 short chain dehydroge 40.8 27 0.00057 27.8 2.7 43 99-150 9-51 (265)
53 PRK06172 short chain dehydroge 40.3 25 0.00053 27.7 2.4 43 99-150 8-50 (253)
54 cd03012 TlpA_like_DipZ_like Tl 40.2 90 0.002 22.4 5.2 55 98-153 24-82 (126)
55 PRK07666 fabG 3-ketoacyl-(acyl 40.1 31 0.00068 26.9 3.0 41 99-148 8-48 (239)
56 PRK07060 short chain dehydroge 40.0 21 0.00045 27.8 1.9 34 99-141 10-43 (245)
57 PRK06057 short chain dehydroge 39.8 53 0.0011 26.0 4.3 39 99-146 8-46 (255)
58 cd02968 SCO SCO (an acronym fo 39.8 1.2E+02 0.0025 21.8 5.8 57 97-153 22-83 (142)
59 PRK07814 short chain dehydroge 39.2 25 0.00055 28.2 2.4 42 99-149 11-52 (263)
60 PRK12826 3-ketoacyl-(acyl-carr 39.1 30 0.00066 26.8 2.7 34 99-141 7-40 (251)
61 PRK07035 short chain dehydroge 38.8 26 0.00057 27.6 2.3 43 99-150 9-51 (252)
62 PLN02896 cinnamyl-alcohol dehy 38.7 37 0.00081 28.7 3.4 41 93-142 5-45 (353)
63 PLN02986 cinnamyl-alcohol dehy 38.0 40 0.00087 27.9 3.4 39 99-146 6-44 (322)
64 PRK08213 gluconate 5-dehydroge 37.2 26 0.00057 27.8 2.1 34 99-141 13-46 (259)
65 PRK08251 short chain dehydroge 37.0 30 0.00064 27.1 2.4 41 100-149 4-44 (248)
66 PRK12939 short chain dehydroge 36.8 40 0.00087 26.2 3.1 42 99-149 8-49 (250)
67 cd03010 TlpA_like_DsbE TlpA-li 36.2 1.6E+02 0.0034 20.9 6.7 50 98-152 26-75 (127)
68 PRK12829 short chain dehydroge 36.1 30 0.00066 27.2 2.3 42 98-148 11-52 (264)
69 PRK09186 flagellin modificatio 35.8 39 0.00084 26.5 2.9 43 100-151 6-48 (256)
70 PRK07775 short chain dehydroge 35.8 30 0.00066 28.0 2.3 35 99-142 11-45 (274)
71 PRK08085 gluconate 5-dehydroge 35.7 32 0.0007 27.2 2.4 35 99-142 10-44 (254)
72 PRK09072 short chain dehydroge 35.7 27 0.00058 27.8 2.0 39 100-147 7-45 (263)
73 PRK05993 short chain dehydroge 35.5 29 0.00062 28.2 2.1 33 100-141 6-38 (277)
74 TIGR01832 kduD 2-deoxy-D-gluco 35.2 46 0.00099 26.0 3.2 34 99-141 6-39 (248)
75 PRK08643 acetoin reductase; Va 34.2 39 0.00084 26.7 2.7 41 100-149 4-44 (256)
76 cd00340 GSH_Peroxidase Glutath 33.5 2E+02 0.0044 21.4 6.4 54 98-153 23-82 (152)
77 PRK08226 short chain dehydroge 33.4 58 0.0013 25.8 3.5 35 98-141 6-40 (263)
78 PRK05867 short chain dehydroge 32.4 38 0.00083 26.8 2.3 42 100-150 11-52 (253)
79 PRK05866 short chain dehydroge 32.2 35 0.00075 28.4 2.2 34 99-141 41-74 (293)
80 PRK05786 fabG 3-ketoacyl-(acyl 32.1 38 0.00083 26.2 2.3 40 99-147 6-45 (238)
81 PRK07904 short chain dehydroge 32.1 1.5E+02 0.0033 23.8 5.8 45 99-151 9-54 (253)
82 PRK08217 fabG 3-ketoacyl-(acyl 31.7 40 0.00086 26.2 2.3 42 99-149 6-47 (253)
83 PRK08628 short chain dehydroge 31.4 47 0.001 26.2 2.7 35 99-142 8-42 (258)
84 PRK09135 pteridine reductase; 31.1 47 0.001 25.7 2.6 35 99-142 7-41 (249)
85 PRK03147 thiol-disulfide oxido 30.9 1.9E+02 0.0041 21.5 5.9 54 97-152 61-114 (173)
86 PLN02399 phospholipid hydroper 30.5 3.3E+02 0.0072 23.0 8.6 53 98-151 100-158 (236)
87 PRK07890 short chain dehydroge 29.8 42 0.00091 26.4 2.2 44 99-151 6-49 (258)
88 cd02967 mauD Methylamine utili 29.3 1.9E+02 0.0042 19.8 6.3 52 98-153 22-73 (114)
89 PRK08277 D-mannonate oxidoredu 29.1 48 0.001 26.6 2.4 35 99-142 11-45 (278)
90 TIGR00715 precor6x_red precorr 29.0 43 0.00093 28.5 2.2 49 100-153 2-63 (256)
91 PF13241 NAD_binding_7: Putati 28.4 38 0.00082 24.3 1.6 17 98-115 7-23 (103)
92 PRK08862 short chain dehydroge 28.1 60 0.0013 26.0 2.8 44 99-151 6-49 (227)
93 PLN02650 dihydroflavonol-4-red 28.0 66 0.0014 27.1 3.2 37 100-145 7-43 (351)
94 PRK07109 short chain dehydroge 27.9 46 0.001 28.4 2.2 44 99-151 9-52 (334)
95 PRK07067 sorbitol dehydrogenas 27.9 46 0.00099 26.3 2.1 39 99-146 7-45 (257)
96 PRK08264 short chain dehydroge 27.8 40 0.00087 26.2 1.7 35 99-141 7-41 (238)
97 COG0743 Dxr 1-deoxy-D-xylulose 27.8 1.5E+02 0.0033 27.5 5.6 46 100-153 3-48 (385)
98 PTZ00056 glutathione peroxidas 27.7 2.1E+02 0.0045 23.0 5.9 55 98-153 40-100 (199)
99 PRK12825 fabG 3-ketoacyl-(acyl 27.7 71 0.0015 24.4 3.1 16 100-115 8-23 (249)
100 PRK08265 short chain dehydroge 27.6 67 0.0014 25.8 3.0 34 99-141 7-40 (261)
101 PLN02657 3,8-divinyl protochlo 27.5 48 0.001 29.2 2.4 35 98-141 60-94 (390)
102 PRK06182 short chain dehydroge 27.3 45 0.00096 26.8 1.9 33 100-141 5-37 (273)
103 KOG1203 Predicted dehydrogenas 26.9 91 0.002 28.9 4.1 46 94-148 75-120 (411)
104 PRK06935 2-deoxy-D-gluconate 3 26.7 78 0.0017 25.1 3.2 34 98-140 15-48 (258)
105 PF11313 DUF3116: Protein of u 26.7 26 0.00057 25.8 0.4 29 100-128 29-57 (85)
106 PRK08339 short chain dehydroge 26.5 54 0.0012 26.5 2.3 43 100-151 10-52 (263)
107 PRK06500 short chain dehydroge 26.5 47 0.001 25.9 1.9 34 99-141 7-40 (249)
108 PRK07825 short chain dehydroge 26.0 47 0.001 26.6 1.8 34 99-141 6-39 (273)
109 PRK07063 short chain dehydroge 25.5 79 0.0017 25.0 3.1 44 99-151 8-51 (260)
110 PRK06196 oxidoreductase; Provi 25.4 53 0.0011 27.4 2.1 35 99-142 27-61 (315)
111 PRK08589 short chain dehydroge 25.1 69 0.0015 25.9 2.7 32 100-140 8-39 (272)
112 PRK07577 short chain dehydroge 25.0 59 0.0013 25.1 2.2 32 100-140 5-36 (234)
113 PRK07831 short chain dehydroge 24.9 68 0.0015 25.5 2.6 44 99-151 18-62 (262)
114 PF05930 Phage_AlpA: Prophage 24.7 13 0.00028 23.8 -1.3 33 117-150 18-50 (51)
115 PRK08220 2,3-dihydroxybenzoate 24.5 51 0.0011 25.8 1.8 16 99-114 9-24 (252)
116 TIGR00385 dsbE periplasmic pro 24.4 3.3E+02 0.0071 20.9 6.8 50 97-152 63-112 (173)
117 PRK07201 short chain dehydroge 24.3 55 0.0012 30.0 2.2 41 100-149 373-413 (657)
118 PRK07097 gluconate 5-dehydroge 24.3 70 0.0015 25.6 2.5 43 99-150 11-53 (265)
119 PRK08219 short chain dehydroge 24.2 44 0.00095 25.5 1.3 32 100-141 5-36 (227)
120 PRK06198 short chain dehydroge 24.1 61 0.0013 25.5 2.1 35 99-142 7-42 (260)
121 TIGR03325 BphB_TodD cis-2,3-di 23.8 57 0.0012 26.0 2.0 34 99-141 6-39 (262)
122 PRK12824 acetoacetyl-CoA reduc 23.5 1.6E+02 0.0035 22.7 4.4 32 100-140 4-35 (245)
123 cd03018 PRX_AhpE_like Peroxire 23.0 2.8E+02 0.0061 20.0 5.4 53 97-152 29-81 (149)
124 PRK06180 short chain dehydroge 22.9 59 0.0013 26.3 1.9 33 100-141 6-38 (277)
125 PRK07024 short chain dehydroge 22.8 50 0.0011 26.3 1.4 33 100-141 4-36 (257)
126 TIGR01500 sepiapter_red sepiap 22.8 1.8E+02 0.0039 23.1 4.7 47 100-151 2-48 (256)
127 cd02970 PRX_like2 Peroxiredoxi 22.8 2.5E+02 0.0055 20.0 5.1 44 97-141 24-67 (149)
128 PRK07576 short chain dehydroge 22.7 71 0.0015 25.7 2.3 34 99-141 10-43 (264)
129 PRK12743 oxidoreductase; Provi 22.7 96 0.0021 24.6 3.1 14 100-113 4-17 (256)
130 PRK05855 short chain dehydroge 22.5 70 0.0015 28.2 2.4 44 98-150 315-358 (582)
131 PRK08063 enoyl-(acyl carrier p 22.4 66 0.0014 25.1 2.0 15 99-113 5-19 (250)
132 PRK02797 4-alpha-L-fucosyltran 22.2 2.9E+02 0.0063 25.0 6.2 54 98-154 145-198 (322)
133 PF05741 zf-nanos: Nanos RNA b 22.1 35 0.00076 23.2 0.4 13 101-113 36-48 (55)
134 PLN02662 cinnamyl-alcohol dehy 22.1 1E+02 0.0022 25.2 3.1 35 99-142 5-39 (322)
135 PRK12827 short chain dehydroge 22.0 1E+02 0.0022 23.8 3.0 14 99-112 7-20 (249)
136 PRK07806 short chain dehydroge 21.9 64 0.0014 25.2 1.9 34 99-141 7-40 (248)
137 PRK05854 short chain dehydroge 21.9 93 0.002 26.1 3.0 44 99-151 15-58 (313)
138 TIGR02661 MauD methylamine deh 21.6 4.1E+02 0.0088 20.9 7.6 50 98-153 75-124 (189)
139 PRK07453 protochlorophyllide o 21.4 66 0.0014 26.8 1.9 42 99-149 7-48 (322)
140 PRK06113 7-alpha-hydroxysteroi 21.4 86 0.0019 24.8 2.5 42 98-148 11-52 (255)
141 PLN02214 cinnamoyl-CoA reducta 21.3 68 0.0015 27.3 2.1 33 100-141 12-44 (342)
142 PRK05447 1-deoxy-D-xylulose 5- 21.3 2.4E+02 0.0052 25.9 5.6 45 100-152 3-47 (385)
143 PLN02583 cinnamoyl-CoA reducta 21.0 69 0.0015 26.5 2.0 32 100-140 8-39 (297)
144 PRK06523 short chain dehydroge 21.0 91 0.002 24.6 2.6 33 99-140 10-42 (260)
145 PF09861 DUF2088: Domain of un 20.7 2.9E+02 0.0063 22.7 5.6 57 98-154 56-115 (204)
146 COG1564 THI80 Thiamine pyropho 20.7 1.5E+02 0.0034 24.9 4.0 39 98-139 92-130 (212)
147 PLN02780 ketoreductase/ oxidor 20.4 77 0.0017 27.0 2.2 44 99-151 54-97 (320)
148 PRK06139 short chain dehydroge 20.4 92 0.002 26.8 2.7 44 99-151 8-51 (330)
149 PLN02427 UDP-apiose/xylose syn 20.4 1.1E+02 0.0024 26.2 3.1 37 96-140 12-48 (386)
150 cd06167 LabA_like LabA_like pr 20.2 2.6E+02 0.0057 20.5 4.8 46 97-152 99-144 (149)
151 PLN02253 xanthoxin dehydrogena 20.2 79 0.0017 25.4 2.1 34 99-141 19-52 (280)
152 PRK09437 bcp thioredoxin-depen 20.1 3.4E+02 0.0074 19.9 5.5 52 99-153 32-84 (154)
153 cd06270 PBP1_GalS_like Ligand 20.1 1.7E+02 0.0037 22.9 4.0 37 102-142 180-217 (268)
No 1
>PLN02640 glucose-6-phosphate 1-dehydrogenase
Probab=99.97 E-value=1.6e-31 Score=246.41 Aligned_cols=139 Identities=73% Similarity=1.025 Sum_probs=117.1
Q ss_pred CcccccccCCCccc--------cccccccccceeccccccccccchhhhhccccccceeeeecCCcCCCcccccccccCC
Q 031491 1 MATAHLSPCSSSLK--------HYKTQLFSDFIVVPRKSCFSTWVSHVQSRIHARKHFQLKSSNGHPLNAVSLQDSLAGK 72 (158)
Q Consensus 1 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (158)
||+--.+||+|+++ +..-.+++.-+..||++ +.|++.++++|+++||+++++|++|+|++++|||- +
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 75 (573)
T PLN02640 1 MATHFMSPCSSSSTNFLASSCFKETVPLFSRSITFPRKS---TFVSQIHSRIHARKHFQLKSSNGHPLNAVSLQDGE--N 75 (573)
T ss_pred CCccccCccccccchhHHHhhhhhcccchhccccccccc---hHHHHHHHHHhhhhheeeccCCCCcccceeccccc--c
Confidence 67666799999996 33333444444467877 88999999999999999999999999999999984 2
Q ss_pred CCCCCCCCchhhhcccCCccccCCCCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHH
Q 031491 73 PLANDHSKPQEIEASVPASSEKLGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIS 152 (158)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~ 152 (158)
.+.+++. ..+.++++|||||||||||+||||||||+|+++|+||++++|||+||+++++++|+++|+
T Consensus 76 ~~~~~~~-------------~~~~~~~~iVIFGATGDLA~RKL~PALy~L~~~g~Lp~~~~IIG~aR~~~s~e~fr~~v~ 142 (573)
T PLN02640 76 HLTEEHA-------------EKGESTLSITVVGASGDLAKKKIFPALFALFYEDWLPENFTVFGYARTKLTDEELRDMIS 142 (573)
T ss_pred cccHhhc-------------cCCCCCeEEEEeCCccHhhhhhHHHHHHHHHHcCCCCCCCEEEEEECCCCCHHHHHHHHH
Confidence 2222222 344568999999999999999999999999999999999999999999999999999999
Q ss_pred hhccc
Q 031491 153 KMIVI 157 (158)
Q Consensus 153 ~~L~c 157 (158)
++++|
T Consensus 143 ~~l~~ 147 (573)
T PLN02640 143 STLTC 147 (573)
T ss_pred HHHHh
Confidence 98865
No 2
>PLN02333 glucose-6-phosphate 1-dehydrogenase
Probab=99.84 E-value=6.7e-21 Score=177.08 Aligned_cols=65 Identities=75% Similarity=1.165 Sum_probs=61.2
Q ss_pred cCCCCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHhhcccC
Q 031491 94 KLGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKMIVIH 158 (158)
Q Consensus 94 ~~~~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~~L~cr 158 (158)
....+++|||||||||||+||||||||+||++|+||++++|||++|+++++++|+++|++.|+|+
T Consensus 113 ~~~~~~~iVIFGASGDLAkRKL~PALf~L~~~g~Lp~~~~IiG~aRs~~t~eefr~~v~~~l~~~ 177 (604)
T PLN02333 113 KDESTVSITVVGASGDLAKKKIFPALFALYYEGCLPEHFTIFGYARSKMTDAELRNMVSKTLTCR 177 (604)
T ss_pred cCCCceEEEEecCccHHhHhhHHHHHHHHHHcCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHhh
Confidence 34567999999999999999999999999999999999999999999999999999999999873
No 3
>PF00479 G6PD_N: Glucose-6-phosphate dehydrogenase, NAD binding domain; InterPro: IPR022674 Glucose-6-phosphate dehydrogenase (1.1.1.49 from EC) (G6PDH) is a ubiquitous protein, present in bacteria and all eukaryotic cell types []. The enzyme catalyses the the first step in the pentose pathway, i.e. the conversion of glucose-6-phosphate to gluconolactone 6-phosphate in the presence of NADP, producing NADPH. The ubiquitous expression of the enzyme gives it a major role in the production of NADPH for the many NADPH-mediated reductive processes in all cells []. Deficiency of G6PDH is a common genetic abnormality affecting millions of people worldwide. Many sequence variants, most caused by single point mutations, are known, exhibiting a wide variety of phenotypes []. This entry represents the NAD-binding domain of glucose-6-phosphate dehydrogenase.; GO: 0004345 glucose-6-phosphate dehydrogenase activity, 0050661 NADP binding, 0006006 glucose metabolic process, 0055114 oxidation-reduction process; PDB: 4EM5_C 4E9I_A 2DPG_A 1E77_A 1E7M_A 1H9B_A 1E7Y_A 1DPG_B 1H93_A 1H9A_A ....
Probab=99.84 E-value=1.6e-21 Score=157.07 Aligned_cols=56 Identities=46% Similarity=0.872 Sum_probs=51.8
Q ss_pred EEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHhhccc
Q 031491 102 TVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKMIVI 157 (158)
Q Consensus 102 VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~~L~c 157 (158)
||||||||||+||||||||+|+++|+||++++|||++|+++++++|+++|++++++
T Consensus 1 VifGatGDLA~RKL~PaL~~L~~~g~lp~~~~Iig~~R~~~~~~~f~~~v~~~l~~ 56 (183)
T PF00479_consen 1 VIFGATGDLAKRKLLPALYNLYRDGLLPEDFRIIGVARSDLSDEEFREKVREALKK 56 (183)
T ss_dssp EEETTTSHHHHHTHHHHHHHHHHTTSS-SSEEEEEEESS--SHHCCHHHHHHCCGG
T ss_pred CEeccccHHHHhHHHHHHHHHHHhCCCCCCcEEEEecCCcCCHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999876
No 4
>PRK05722 glucose-6-phosphate 1-dehydrogenase; Validated
Probab=99.78 E-value=2.6e-19 Score=163.24 Aligned_cols=65 Identities=37% Similarity=0.737 Sum_probs=60.7
Q ss_pred ccCCCCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHhhccc
Q 031491 93 EKLGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKMIVI 157 (158)
Q Consensus 93 ~~~~~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~~L~c 157 (158)
+....+++|||||||||||+||||||||+|++.|+||++++|||++|+++++++|++++++.+++
T Consensus 4 ~~~~~~~~~vifGatGDLa~rkL~PaL~~L~~~~~lp~~~~IiG~aR~~~~~e~~r~~v~~~l~~ 68 (495)
T PRK05722 4 PRTAEPCDLVIFGATGDLARRKLLPALYNLYKAGLLPEDFRIIGVARRDWSDEDFREVVREALKE 68 (495)
T ss_pred CCCCCCeEEEEeCCchHHhHhhHHHHHHHHHHcCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999988764
No 5
>PRK12854 glucose-6-phosphate 1-dehydrogenase; Provisional
Probab=99.78 E-value=3.5e-19 Score=162.18 Aligned_cols=62 Identities=31% Similarity=0.541 Sum_probs=59.0
Q ss_pred CCCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHhhccc
Q 031491 96 GSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKMIVI 157 (158)
Q Consensus 96 ~~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~~L~c 157 (158)
.++++|||||||||||+||||||||+|+++|.||++++|||++|+++++++|+++|++++++
T Consensus 9 ~~~~~~VIFGAtGDLa~RKL~PaL~~L~~~~~lp~~~~IiG~aR~~~~~e~fr~~v~~~l~~ 70 (484)
T PRK12854 9 APPTVFVLFGATGDLAKRKLLPGLFHLARAGLLPPDWRIVGTGRGDVSAEAFREHARDALDE 70 (484)
T ss_pred CCCeEEEEeCCchHHhhhhHHHHHHHHHHcCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999999998764
No 6
>PRK12853 glucose-6-phosphate 1-dehydrogenase; Provisional
Probab=99.78 E-value=3.7e-19 Score=161.87 Aligned_cols=62 Identities=32% Similarity=0.634 Sum_probs=59.0
Q ss_pred CCCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHhhccc
Q 031491 96 GSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKMIVI 157 (158)
Q Consensus 96 ~~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~~L~c 157 (158)
.++++|||||||||||+||||||||+|+++|+||++|+|||++|+++++++|+++|+++|++
T Consensus 6 ~~~~~~vIfGAtGDLA~RkL~PaL~~L~~~~~lp~~~~IiG~aR~~~~~e~fr~~v~~~l~~ 67 (482)
T PRK12853 6 APPCTLVIFGATGDLARRKLLPALYRLARAGLLPEDLRIIGVGRDDWSDEQWRARVRESLRA 67 (482)
T ss_pred CCCeEEEEeCCccHHHHhhHHHHHHHHHHcCCCCCCCEEEEEeCCcCCHHHHHHHHHHHHHh
Confidence 45799999999999999999999999999999999999999999999999999999998853
No 7
>TIGR00871 zwf glucose-6-phosphate 1-dehydrogenase. This is a well-studied enzyme family, with sequences available from well over 50 species. The trusted cutoff is set above the score for the Drosophila melanogaster CG7140 gene product, a homolog of unknown function. G6PD homologs from the bacteria Aquifex aeolicus and Helicobacter pylori lack several motifs well conserved most other members, were omitted from the seed alignment, and score well below the trusted cutoff.
Probab=99.78 E-value=3.4e-19 Score=162.05 Aligned_cols=61 Identities=41% Similarity=0.756 Sum_probs=58.3
Q ss_pred CCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHhhccc
Q 031491 97 STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKMIVI 157 (158)
Q Consensus 97 ~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~~L~c 157 (158)
++++|||||||||||+||||||||+|+++|+||++++|||++|+++++++|+++|++++++
T Consensus 1 ~~~~~vifGatGDLa~rkL~PaL~~L~~~~~lp~~~~Iig~aR~~~s~e~f~~~v~~~l~~ 61 (482)
T TIGR00871 1 DPCILVIFGASGDLARKKLFPALYRLFRNGLLPPDFRIVGVARRDLSVEDFRKQVREAIIK 61 (482)
T ss_pred CCeEEEEECCccHHHHhhHHHHHHHHHHcCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999999999999999999999999998864
No 8
>PLN02539 glucose-6-phosphate 1-dehydrogenase
Probab=99.77 E-value=5.6e-19 Score=161.10 Aligned_cols=65 Identities=55% Similarity=0.835 Sum_probs=60.6
Q ss_pred ccCCCCeEEEEEccchhhhhhhhHHHHHHhHHcCCC-CCCcEEEEEeCCCCChHHHHHHHHhhccc
Q 031491 93 EKLGSTLSITVVGASGDLAKKKIFPALFALYYEDCL-PEDFTVFGYARTKLTDEELRNVISKMIVI 157 (158)
Q Consensus 93 ~~~~~~~s~VIFGATGDLAkRKL~PALf~L~~~g~L-p~~~~IIG~aR~~~t~eefr~~v~~~L~c 157 (158)
+...++++|||||||||||+||||||||+||++|.| |++++|||++|+++++++|++++++.+++
T Consensus 12 ~~~~~~~~~VIFGAtGDLa~RKL~PaL~~L~~~~~lpp~~~~IiG~aR~~~s~e~fr~~v~~~l~~ 77 (491)
T PLN02539 12 VVETGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLPPDEVHIFGYARSKITDEELRDRIRGYLKD 77 (491)
T ss_pred cCCCCCeEEEEeCCccHHHHhhHHHHHHHHHHcCCCCCCCcEEEEEECCCCCHHHHHHHHHHHHHh
Confidence 344568999999999999999999999999999999 88999999999999999999999998864
No 9
>COG0364 Zwf Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.77 E-value=5.7e-19 Score=160.69 Aligned_cols=61 Identities=44% Similarity=0.847 Sum_probs=58.4
Q ss_pred CCCCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHhhc
Q 031491 95 LGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKMI 155 (158)
Q Consensus 95 ~~~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~~L 155 (158)
...++++||||||||||+||||||||+|+++|.||++++|||+||++|+.++|++.+++++
T Consensus 4 ~~~~~~lvIFGatGDLA~RKL~PALy~L~~~g~l~~~~~IiG~aR~~~s~e~f~~~~~~~i 64 (483)
T COG0364 4 TVEPFDLVIFGATGDLARRKLFPALYRLYKEGLLPEDFRIIGVARSKWSNEEFRALVREAI 64 (483)
T ss_pred ccCcceEEEEcccchhhhhhHHHHHHHHHHcCCCCCCceEEEEecCcCChHHHHHHHHHHh
Confidence 3568999999999999999999999999999999999999999999999999999999887
No 10
>KOG0563 consensus Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.74 E-value=2.2e-18 Score=156.53 Aligned_cols=65 Identities=71% Similarity=1.008 Sum_probs=61.8
Q ss_pred cCCCCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHhhcccC
Q 031491 94 KLGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKMIVIH 158 (158)
Q Consensus 94 ~~~~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~~L~cr 158 (158)
+...+++|||||||||||+||+|||||+||++|+||++|.|+|+||+.++.+++++.+.+.++|+
T Consensus 13 ~~~~~~~iiVfGASGDLAKKK~fPaLf~L~~~g~lp~~~~i~GYARSklt~ee~~~~~~~~l~~~ 77 (499)
T KOG0563|consen 13 QGESTLSIIVFGASGDLAKKKIFPALFALYREGLLPEDFKIFGYARSKLTDEELRKSISETLKCR 77 (499)
T ss_pred CCcceEEEEEEecCchhhhcchhHHHHHHHHhccCCCceEEEEEecccCChHHHHHHHhhhcCCC
Confidence 33467999999999999999999999999999999999999999999999999999999999996
No 11
>PTZ00309 glucose-6-phosphate 1-dehydrogenase; Provisional
Probab=99.72 E-value=8.8e-18 Score=154.85 Aligned_cols=60 Identities=48% Similarity=0.856 Sum_probs=54.9
Q ss_pred CCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChH-HHHHH-HHhhcc
Q 031491 97 STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDE-ELRNV-ISKMIV 156 (158)
Q Consensus 97 ~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~e-efr~~-v~~~L~ 156 (158)
.+++|||||||||||+||||||||+|+++|.||++++|||+||++++++ +|++. +++.++
T Consensus 53 ~~~~iVIFGATGDLA~RKL~PAL~~L~~~g~lp~~~~IiG~aR~~~~~e~~~~~~~l~~~~~ 114 (542)
T PTZ00309 53 RALTIIVLGASGDLAKKKTFPALFQLYCEGLLPSEVNIVGYARSKMSDVERWKKETLARFFK 114 (542)
T ss_pred CCeEEEEecCccHHhhhhHHHHHHHHHHcCCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHhh
Confidence 4799999999999999999999999999999999999999999999998 77776 666553
No 12
>PF13905 Thioredoxin_8: Thioredoxin-like; PDB: 1FG4_A 1I5G_A 1OC8_B 1O6J_A 1OC9_B 1O81_A 3FKF_A 1O85_A 1O7U_A 1O8W_A ....
Probab=85.53 E-value=4 Score=27.79 Aligned_cols=55 Identities=22% Similarity=0.100 Sum_probs=43.4
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHhh
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKM 154 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~~ 154 (158)
..++.|.|++.=.-++.+|.|-.|+..-.-..++.||+++.. -+.+++.+.+.+.
T Consensus 3 ~~ll~fwa~~c~~c~~~~~~l~~l~~~~~~~~~v~~v~Vs~d-~~~~~~~~~~~~~ 57 (95)
T PF13905_consen 3 PVLLYFWASWCPPCKKELPKLKELYKKYKKKDDVEFVFVSLD-EDEEEWKKFLKKN 57 (95)
T ss_dssp EEEEEEE-TTSHHHHHHHHHHHHHHHHHTTTTTEEEEEEE-S-SSHHHHHHHHHTC
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCCEEEEEEEeC-CCHHHHHHHHHhc
Confidence 578999999998999999999999976422578999999995 5568888887654
No 13
>cd03011 TlpA_like_ScsD_MtbDsbE TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif. The Salmonella typhimurium ScsD is a thioredoxin-like protein which confers copper tolerance to copper-sensitive mutants of E. coli. MtbDsbE has been characterized as an oxidase in vitro, catalyzing the disulfide bond formation of substrates like hirudin. The reduced form of MtbDsbE is more stable than its oxidized form, consistent with an oxidase function. This is in contrast to the function of DsbE from gram-negative bacteria which is a specific reductase of apocytochrome c.
Probab=82.51 E-value=4.2 Score=28.85 Aligned_cols=50 Identities=14% Similarity=0.045 Sum_probs=40.5
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHh
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISK 153 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~ 153 (158)
...++.|.+++.=.-+...|.|..++.+ +.+++++..+.+.+++++++++
T Consensus 21 k~~vl~F~~~~C~~C~~~~~~l~~~~~~------~~~i~i~~~~~~~~~~~~~~~~ 70 (123)
T cd03011 21 KPVLVYFWATWCPVCRFTSPTVNQLAAD------YPVVSVALRSGDDGAVARFMQK 70 (123)
T ss_pred CEEEEEEECCcChhhhhhChHHHHHHhh------CCEEEEEccCCCHHHHHHHHHH
Confidence 5689999999999999999999999865 6788888766667777776654
No 14
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=73.63 E-value=3.1 Score=33.44 Aligned_cols=36 Identities=28% Similarity=0.362 Sum_probs=23.7
Q ss_pred CCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 97 STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 97 ~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
+.-.++|+||||.+++.-+ ..| ... +..|+++.|+.
T Consensus 16 ~~~~ilItGasG~iG~~l~-~~L---~~~-----g~~V~~~~R~~ 51 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIV-EQL---LAK-----GFAVKAGVRDV 51 (251)
T ss_pred cCCeEEEECCCcHHHHHHH-HHH---HhC-----CCEEEEEecCH
Confidence 4568999999999987654 222 222 35667776653
No 15
>PRK07326 short chain dehydrogenase; Provisional
Probab=69.11 E-value=3.4 Score=32.12 Aligned_cols=44 Identities=23% Similarity=0.117 Sum_probs=28.1
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||+|.++....- .| ... +..|++++|.+-..+++.+.+
T Consensus 7 ~~ilItGatg~iG~~la~-~l---~~~-----g~~V~~~~r~~~~~~~~~~~l 50 (237)
T PRK07326 7 KVALITGGSKGIGFAIAE-AL---LAE-----GYKVAITARDQKELEEAAAEL 50 (237)
T ss_pred CEEEEECCCCcHHHHHHH-HH---HHC-----CCEEEEeeCCHHHHHHHHHHH
Confidence 578999999999876542 22 222 357888888764444444443
No 16
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=68.39 E-value=5.3 Score=30.80 Aligned_cols=44 Identities=20% Similarity=0.184 Sum_probs=28.7
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||+|-++.... . .|...| ..|++++|++...+.+.+.+
T Consensus 6 ~~ilItGasg~iG~~l~-~---~l~~~g-----~~v~~~~r~~~~~~~~~~~~ 49 (246)
T PRK05653 6 KTALVTGASRGIGRAIA-L---RLAADG-----AKVVIYDSNEEAAEALAAEL 49 (246)
T ss_pred CEEEEECCCcHHHHHHH-H---HHHHCC-----CEEEEEeCChhHHHHHHHHH
Confidence 47999999999987644 2 233333 46888988765544444433
No 17
>PRK07454 short chain dehydrogenase; Provisional
Probab=65.79 E-value=4.8 Score=31.57 Aligned_cols=44 Identities=20% Similarity=0.164 Sum_probs=27.8
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||+|.++..-. . .|.+. +.+|+.++|++-..++..+.+
T Consensus 7 k~vlItG~sg~iG~~la-~---~l~~~-----G~~V~~~~r~~~~~~~~~~~~ 50 (241)
T PRK07454 7 PRALITGASSGIGKATA-L---AFAKA-----GWDLALVARSQDALEALAAEL 50 (241)
T ss_pred CEEEEeCCCchHHHHHH-H---HHHHC-----CCEEEEEeCCHHHHHHHHHHH
Confidence 36899999999886543 2 22233 357888888764444544443
No 18
>COG3311 AlpA Predicted transcriptional regulator [Transcription]
Probab=65.61 E-value=11 Score=26.90 Aligned_cols=40 Identities=13% Similarity=0.228 Sum_probs=31.7
Q ss_pred hHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHhhc
Q 031491 115 IFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKMI 155 (158)
Q Consensus 115 L~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~~L 155 (158)
--|.+|.+..+|.+|..++|=| ....|.+.|+.+|+...+
T Consensus 26 SrstiYr~i~~~~FPkpvklG~-r~v~W~~SEI~~Wi~~~~ 65 (70)
T COG3311 26 SRSTIYRLIKDGTFPKPVKLGG-RSVAWPESEIDEWIASRK 65 (70)
T ss_pred cHHHHHHHHccCCCCCCeecCc-ccccccHHHHHHHHHHHH
Confidence 3489999999999998877654 566788888888876654
No 19
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=61.87 E-value=6.5 Score=31.20 Aligned_cols=44 Identities=14% Similarity=-0.003 Sum_probs=27.8
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||+|.++..-. ..|..+ +.+|+.++|++...++..+.+
T Consensus 11 k~vlItGa~g~iG~~ia----~~l~~~-----G~~V~~~~r~~~~~~~~~~~i 54 (255)
T PRK07523 11 RRALVTGSSQGIGYALA----EGLAQA-----GAEVILNGRDPAKLAAAAESL 54 (255)
T ss_pred CEEEEECCcchHHHHHH----HHHHHc-----CCEEEEEeCCHHHHHHHHHHH
Confidence 47999999999987543 223333 357888888754334444443
No 20
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=61.40 E-value=7.9 Score=30.30 Aligned_cols=43 Identities=16% Similarity=0.053 Sum_probs=28.2
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
.++|.||+|.++..-. ..| ..+ +.+|++++|+....+++...+
T Consensus 6 ~vlItG~sg~iG~~la-~~l---~~~-----g~~v~~~~r~~~~~~~~~~~~ 48 (258)
T PRK12429 6 VALVTGAASGIGLEIA-LAL---AKE-----GAKVVIADLNDEAAAAAAEAL 48 (258)
T ss_pred EEEEECCCchHHHHHH-HHH---HHC-----CCeEEEEeCCHHHHHHHHHHH
Confidence 7899999999986432 222 222 468888898775555554443
No 21
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=60.44 E-value=26 Score=27.24 Aligned_cols=46 Identities=17% Similarity=0.414 Sum_probs=32.2
Q ss_pred EEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHhh
Q 031491 101 ITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKM 154 (158)
Q Consensus 101 ~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~~ 154 (158)
++|+|+||=..+.-| ...++ .|++|+|+|.+= .-..+.+.+++++.
T Consensus 1 i~ILGsTGSIG~qtL-----dVi~~--~~d~f~v~~Lsa-~~n~~~L~~q~~~f 46 (129)
T PF02670_consen 1 IAILGSTGSIGTQTL-----DVIRK--HPDKFEVVALSA-GSNIEKLAEQAREF 46 (129)
T ss_dssp EEEESTTSHHHHHHH-----HHHHH--CTTTEEEEEEEE-SSTHHHHHHHHHHH
T ss_pred CEEEcCCcHHHHHHH-----HHHHh--CCCceEEEEEEc-CCCHHHHHHHHHHh
Confidence 689999999887654 23333 378999999876 33456777666553
No 22
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=59.52 E-value=9.2 Score=30.11 Aligned_cols=45 Identities=16% Similarity=0.071 Sum_probs=30.2
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIS 152 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~ 152 (158)
-.++|.||+|-++.... .. |...| ..|+.++|.+...++..+.+.
T Consensus 8 ~~vlItGasg~iG~~la-~~---l~~~G-----~~v~~~~r~~~~~~~~~~~~~ 52 (262)
T PRK13394 8 KTAVVTGAASGIGKEIA-LE---LARAG-----AAVAIADLNQDGANAVADEIN 52 (262)
T ss_pred CEEEEECCCChHHHHHH-HH---HHHCC-----CeEEEEeCChHHHHHHHHHHH
Confidence 47899999999997643 22 23334 468888887765566655543
No 23
>PRK12828 short chain dehydrogenase; Provisional
Probab=58.37 E-value=10 Score=29.15 Aligned_cols=39 Identities=15% Similarity=0.079 Sum_probs=25.0
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEE 146 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~ee 146 (158)
-+++|.||||-++.... -.|.++ +.+|++++|+....++
T Consensus 8 k~vlItGatg~iG~~la----~~l~~~-----G~~v~~~~r~~~~~~~ 46 (239)
T PRK12828 8 KVVAITGGFGGLGRATA----AWLAAR-----GARVALIGRGAAPLSQ 46 (239)
T ss_pred CEEEEECCCCcHhHHHH----HHHHHC-----CCeEEEEeCChHhHHH
Confidence 36999999998885432 222233 4578888886644333
No 24
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=57.76 E-value=10 Score=22.50 Aligned_cols=33 Identities=21% Similarity=0.491 Sum_probs=25.3
Q ss_pred HHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHH
Q 031491 117 PALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIS 152 (158)
Q Consensus 117 PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~ 152 (158)
..+++|.++|.+|. ..+ | .+.-++.+++.+++.
T Consensus 16 ~ti~~~~~~g~i~~-~~~-g-~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 16 DTVYRLIHEGELPA-YRV-G-RHYRIPREDVDEYLE 48 (49)
T ss_pred HHHHHHHHcCCCCe-EEe-C-CeEEEeHHHHHHHHh
Confidence 57899999999983 444 6 566788899888865
No 25
>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=57.09 E-value=53 Score=21.56 Aligned_cols=56 Identities=18% Similarity=0.089 Sum_probs=40.8
Q ss_pred CCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHh
Q 031491 97 STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISK 153 (158)
Q Consensus 97 ~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~ 153 (158)
....++.|.++.=-.-++.+|.|..+...-. ..++.|+++...+.+.+++.+++.+
T Consensus 19 ~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~~v~~d~~~~~~~~~~~~~ 74 (116)
T cd02966 19 GKVVLVNFWASWCPPCRAEMPELEALAKEYK-DDGVEVVGVNVDDDDPAAVKAFLKK 74 (116)
T ss_pred CCEEEEEeecccChhHHHHhHHHHHHHHHhC-CCCeEEEEEECCCCCHHHHHHHHHH
Confidence 3467777777765556778899999987632 2469999998876567777777654
No 26
>PRK07774 short chain dehydrogenase; Provisional
Probab=56.55 E-value=10 Score=29.67 Aligned_cols=43 Identities=23% Similarity=0.160 Sum_probs=28.0
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
.++|.||+|.++.... ..|...| .+|+.++|.+...+++.+.+
T Consensus 8 ~vlItGasg~iG~~la----~~l~~~g-----~~vi~~~r~~~~~~~~~~~~ 50 (250)
T PRK07774 8 VAIVTGAAGGIGQAYA----EALAREG-----ASVVVADINAEGAERVAKQI 50 (250)
T ss_pred EEEEECCCchHHHHHH----HHHHHCC-----CEEEEEeCCHHHHHHHHHHH
Confidence 5899999999986543 2233333 57888888765445554444
No 27
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=54.73 E-value=11 Score=29.37 Aligned_cols=43 Identities=19% Similarity=0.088 Sum_probs=27.8
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNV 150 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~ 150 (158)
-+++|.||+|-++.... ..|.+. +.+|++++|+....++....
T Consensus 6 ~~vlItGasg~iG~~l~----~~l~~~-----G~~V~~~~r~~~~~~~~~~~ 48 (251)
T PRK07231 6 KVAIVTGASSGIGEGIA----RRFAAE-----GARVVVTDRNEEAAERVAAE 48 (251)
T ss_pred cEEEEECCCChHHHHHH----HHHHHC-----CCEEEEEeCCHHHHHHHHHH
Confidence 37999999999987433 122333 35789999987544444443
No 28
>PRK06914 short chain dehydrogenase; Provisional
Probab=54.28 E-value=13 Score=29.97 Aligned_cols=40 Identities=23% Similarity=0.199 Sum_probs=26.0
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELR 148 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr 148 (158)
.++|.||+|.++..-. ..| ..+ +..|++++|+.-..++..
T Consensus 5 ~~lItGasg~iG~~la-~~l---~~~-----G~~V~~~~r~~~~~~~~~ 44 (280)
T PRK06914 5 IAIVTGASSGFGLLTT-LEL---AKK-----GYLVIATMRNPEKQENLL 44 (280)
T ss_pred EEEEECCCchHHHHHH-HHH---HhC-----CCEEEEEeCCHHHHHHHH
Confidence 5799999999987644 222 233 467888888764444443
No 29
>cd03009 TryX_like_TryX_NRX Tryparedoxin (TryX)-like family, TryX and nucleoredoxin (NRX) subfamily; TryX and NRX are thioredoxin (TRX)-like protein disulfide oxidoreductases that alter the redox state of target proteins via the reversible oxidation of an active center CXXC motif. TryX is involved in the regulation of oxidative stress in parasitic trypanosomatids by reducing TryX peroxidase, which in turn catalyzes the reduction of hydrogen peroxide and organic hydroperoxides. TryX derives reducing equivalents from reduced trypanothione, a polyamine peptide conjugate unique to trypanosomatids, which is regenerated by the NADPH-dependent flavoprotein trypanothione reductase. Vertebrate NRX is a 400-amino acid nuclear protein with one redox active TRX domain containing a CPPC active site motif followed by one redox inactive TRX-like domain. Mouse NRX transcripts are expressed in all adult tissues but is restricted to the nervous system and limb buds in embryos. Plant NRX, longer than the
Probab=52.80 E-value=55 Score=23.53 Aligned_cols=53 Identities=13% Similarity=0.096 Sum_probs=39.3
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCC-CCCCcEEEEEeCCCCChHHHHHHH
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDC-LPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~-Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
...+|.|.|+.--.-++.+|.|-.++.+-. ...++.|++++... +.+++.+.+
T Consensus 19 k~vll~Fwa~wC~~C~~~~p~l~~~~~~~~~~~~~~~vv~is~d~-~~~~~~~~~ 72 (131)
T cd03009 19 KTVGLYFSASWCPPCRAFTPKLVEFYEKLKESGKNFEIVFISWDR-DEESFNDYF 72 (131)
T ss_pred cEEEEEEECCCChHHHHHhHHHHHHHHHHHhcCCCEEEEEEECCC-CHHHHHHHH
Confidence 468999999998889999999988876532 12368999998643 456666554
No 30
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=52.71 E-value=8.7 Score=28.86 Aligned_cols=15 Identities=33% Similarity=0.457 Sum_probs=12.8
Q ss_pred EEEEccchhhhhhhh
Q 031491 101 ITVVGASGDLAKKKI 115 (158)
Q Consensus 101 ~VIFGATGDLAkRKL 115 (158)
|+||||||-+++..+
T Consensus 1 I~V~GatG~vG~~l~ 15 (183)
T PF13460_consen 1 ILVFGATGFVGRALA 15 (183)
T ss_dssp EEEETTTSHHHHHHH
T ss_pred eEEECCCChHHHHHH
Confidence 689999999998744
No 31
>cd02964 TryX_like_family Tryparedoxin (TryX)-like family; composed of TryX and related proteins including nucleoredoxin (NRX), rod-derived cone viability factor (RdCVF) and the nematode homolog described as a 16-kD class of TRX. Most members of this family, except RdCVF, are protein disulfide oxidoreductases containing an active site CXXC motif, similar to TRX.
Probab=49.97 E-value=69 Score=23.33 Aligned_cols=56 Identities=16% Similarity=0.145 Sum_probs=40.5
Q ss_pred CCeEEEEEccchhhhhhhhHHHHHHhHHcCCC-CCCcEEEEEeCCCCChHHHHHHHHh
Q 031491 97 STLSITVVGASGDLAKKKIFPALFALYYEDCL-PEDFTVFGYARTKLTDEELRNVISK 153 (158)
Q Consensus 97 ~~~s~VIFGATGDLAkRKL~PALf~L~~~g~L-p~~~~IIG~aR~~~t~eefr~~v~~ 153 (158)
....+|.|.||.--.-+..+|.|-.++.+-.- ..++.|++++..+ +.+++..++.+
T Consensus 17 Gk~vll~F~atwC~~C~~~~p~l~~l~~~~~~~~~~v~vi~Vs~d~-~~~~~~~~~~~ 73 (132)
T cd02964 17 GKTVGLYFSASWCPPCRAFTPKLVEFYEKLKEEGKNFEIVFVSRDR-SEESFNEYFSE 73 (132)
T ss_pred CCEEEEEEECCCCchHHHHHHHHHHHHHHHhhcCCCeEEEEEecCC-CHHHHHHHHhc
Confidence 35789999999888899999999888764211 1368999998754 34566655543
No 32
>PRK09291 short chain dehydrogenase; Provisional
Probab=49.49 E-value=34 Score=26.88 Aligned_cols=41 Identities=17% Similarity=0.236 Sum_probs=26.2
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRN 149 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~ 149 (158)
.++|.||||-++..-. -.|...| .+|+++.|++-..+++.+
T Consensus 4 ~vlVtGasg~iG~~ia----~~l~~~G-----~~v~~~~r~~~~~~~~~~ 44 (257)
T PRK09291 4 TILITGAGSGFGREVA----LRLARKG-----HNVIAGVQIAPQVTALRA 44 (257)
T ss_pred EEEEeCCCCHHHHHHH----HHHHHCC-----CEEEEEeCCHHHHHHHHH
Confidence 5899999998877542 2333333 678888886543344443
No 33
>PRK07074 short chain dehydrogenase; Provisional
Probab=48.67 E-value=14 Score=29.20 Aligned_cols=41 Identities=12% Similarity=0.137 Sum_probs=26.2
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRN 149 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~ 149 (158)
.++|.||||.++.... .. |.+.| .+|++++|+....+++.+
T Consensus 4 ~ilItGat~~iG~~la-~~---L~~~g-----~~v~~~~r~~~~~~~~~~ 44 (257)
T PRK07074 4 TALVTGAAGGIGQALA-RR---FLAAG-----DRVLALDIDAAALAAFAD 44 (257)
T ss_pred EEEEECCcchHHHHHH-HH---HHHCC-----CEEEEEeCCHHHHHHHHH
Confidence 5899999999987653 22 22333 568888887654444443
No 34
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=48.38 E-value=14 Score=29.20 Aligned_cols=45 Identities=22% Similarity=0.203 Sum_probs=27.9
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
.-+++|.||+|-++....- .|.+.| .+|++++|+....+++.+.+
T Consensus 12 ~k~vlItG~~g~iG~~la~----~l~~~G-----~~Vi~~~r~~~~~~~~~~~l 56 (247)
T PRK08945 12 DRIILVTGAGDGIGREAAL----TYARHG-----ATVILLGRTEEKLEAVYDEI 56 (247)
T ss_pred CCEEEEeCCCchHHHHHHH----HHHHCC-----CcEEEEeCCHHHHHHHHHHH
Confidence 3479999999998876542 222333 47777887654444444433
No 35
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=48.08 E-value=15 Score=29.00 Aligned_cols=35 Identities=20% Similarity=0.077 Sum_probs=24.2
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
.-.++|.||+|.+++... .. |.+.| .+|+.++|+.
T Consensus 11 ~k~ilItGas~~IG~~la-~~---l~~~G-----~~v~~~~r~~ 45 (256)
T PRK06124 11 GQVALVTGSARGLGFEIA-RA---LAGAG-----AHVLVNGRNA 45 (256)
T ss_pred CCEEEEECCCchHHHHHH-HH---HHHcC-----CeEEEEeCCH
Confidence 347899999999987543 22 22333 5788888875
No 36
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=47.74 E-value=11 Score=29.71 Aligned_cols=20 Identities=35% Similarity=0.649 Sum_probs=14.8
Q ss_pred EEEEccchhhhhhhhHHHHHH
Q 031491 101 ITVVGASGDLAKKKIFPALFA 121 (158)
Q Consensus 101 ~VIFGATGDLAkRKL~PALf~ 121 (158)
|.|+||||.+++. ++.+|-.
T Consensus 1 I~V~GatG~~G~~-v~~~L~~ 20 (233)
T PF05368_consen 1 ILVTGATGNQGRS-VVRALLS 20 (233)
T ss_dssp EEEETTTSHHHHH-HHHHHHH
T ss_pred CEEECCccHHHHH-HHHHHHh
Confidence 6899999999964 3455544
No 37
>PRK07478 short chain dehydrogenase; Provisional
Probab=47.67 E-value=16 Score=28.95 Aligned_cols=44 Identities=20% Similarity=0.132 Sum_probs=28.5
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||+|.++..-. ..|.+.| .+|+.++|++-..++..+.+
T Consensus 7 k~~lItGas~giG~~ia----~~l~~~G-----~~v~~~~r~~~~~~~~~~~~ 50 (254)
T PRK07478 7 KVAIITGASSGIGRAAA----KLFAREG-----AKVVVGARRQAELDQLVAEI 50 (254)
T ss_pred CEEEEeCCCChHHHHHH----HHHHHCC-----CEEEEEeCCHHHHHHHHHHH
Confidence 36899999999887632 1333334 57888888765545554444
No 38
>PRK06949 short chain dehydrogenase; Provisional
Probab=47.50 E-value=16 Score=28.81 Aligned_cols=34 Identities=24% Similarity=0.090 Sum_probs=23.5
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-.++|.||+|.++..-.- .|.+.| .+|++++|+.
T Consensus 10 k~ilItGasg~IG~~~a~----~l~~~G-----~~Vi~~~r~~ 43 (258)
T PRK06949 10 KVALVTGASSGLGARFAQ----VLAQAG-----AKVVLASRRV 43 (258)
T ss_pred CEEEEECCCcHHHHHHHH----HHHHCC-----CEEEEEeCCH
Confidence 479999999999876442 222333 5788888865
No 39
>PRK05875 short chain dehydrogenase; Provisional
Probab=47.41 E-value=15 Score=29.41 Aligned_cols=35 Identities=17% Similarity=0.092 Sum_probs=23.3
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKL 142 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~ 142 (158)
-.++|+||+|.++.... ..|.+.| .+|++++|+.-
T Consensus 8 k~vlItGasg~IG~~la----~~l~~~G-----~~V~~~~r~~~ 42 (276)
T PRK05875 8 RTYLVTGGGSGIGKGVA----AGLVAAG-----AAVMIVGRNPD 42 (276)
T ss_pred CEEEEECCCcHHHHHHH----HHHHHCC-----CeEEEEeCCHH
Confidence 37899999999986543 2223333 57888888653
No 40
>cd02969 PRX_like1 Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.
Probab=47.30 E-value=84 Score=23.86 Aligned_cols=56 Identities=13% Similarity=0.042 Sum_probs=42.2
Q ss_pred CCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCC------ChHHHHHHHHh
Q 031491 97 STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKL------TDEELRNVISK 153 (158)
Q Consensus 97 ~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~------t~eefr~~v~~ 153 (158)
....++.|.+++=-.-+..+|.|-.|+.+-. ..++.|||+...+. +.+++++++.+
T Consensus 25 ~k~~ll~f~~t~Cp~c~~~~~~l~~l~~~~~-~~~v~~v~is~d~~~~~~~d~~~~~~~~~~~ 86 (171)
T cd02969 25 GKALVVMFICNHCPYVKAIEDRLNRLAKEYG-AKGVAVVAINSNDIEAYPEDSPENMKAKAKE 86 (171)
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHHh-hCCeEEEEEecCccccccccCHHHHHHHHHH
Confidence 3568888889988888888999999986521 24799999987653 55777777653
No 41
>PRK08703 short chain dehydrogenase; Provisional
Probab=47.20 E-value=28 Score=27.27 Aligned_cols=44 Identities=30% Similarity=0.233 Sum_probs=28.7
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||+|=|++.-. ..| .+. +.+|+.++|++...+++.+.+
T Consensus 7 k~vlItG~sggiG~~la-~~l---~~~-----g~~V~~~~r~~~~~~~~~~~l 50 (239)
T PRK08703 7 KTILVTGASQGLGEQVA-KAY---AAA-----GATVILVARHQKKLEKVYDAI 50 (239)
T ss_pred CEEEEECCCCcHHHHHH-HHH---HHc-----CCEEEEEeCChHHHHHHHHHH
Confidence 47899999998887632 222 222 468888999875545544443
No 42
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=44.52 E-value=21 Score=27.64 Aligned_cols=42 Identities=24% Similarity=0.165 Sum_probs=25.7
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEE-eCCCCChHHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGY-ARTKLTDEELRNV 150 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~-aR~~~t~eefr~~ 150 (158)
.++|.||||.++.... .. |.+.| .+++.+ +|+....+++.+.
T Consensus 7 ~ilI~Gasg~iG~~la-~~---l~~~g-----~~v~~~~~r~~~~~~~~~~~ 49 (247)
T PRK05565 7 VAIVTGASGGIGRAIA-EL---LAKEG-----AKVVIAYDINEEAAQELLEE 49 (247)
T ss_pred EEEEeCCCcHHHHHHH-HH---HHHCC-----CEEEEEcCCCHHHHHHHHHH
Confidence 6899999999997654 22 22333 456666 7765444444443
No 43
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=43.59 E-value=19 Score=34.62 Aligned_cols=40 Identities=25% Similarity=0.282 Sum_probs=26.6
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEEL 147 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eef 147 (158)
-.++|+||+|-++++.+ - .|.+. +..|+++.|+.-..+++
T Consensus 81 KvVLVTGATGgIG~aLA-r---~LLk~-----G~~Vval~Rn~ekl~~l 120 (576)
T PLN03209 81 DLAFVAGATGKVGSRTV-R---ELLKL-----GFRVRAGVRSAQRAESL 120 (576)
T ss_pred CEEEEECCCCHHHHHHH-H---HHHHC-----CCeEEEEeCCHHHHHHH
Confidence 36899999999988755 2 23333 36788888876444433
No 44
>PRK06138 short chain dehydrogenase; Provisional
Probab=42.58 E-value=20 Score=27.95 Aligned_cols=40 Identities=18% Similarity=0.138 Sum_probs=25.2
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEEL 147 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eef 147 (158)
-+++|.||+|-++.... . .|.+.| .+|+.++|+....++.
T Consensus 6 k~~lItG~sg~iG~~la-~---~l~~~G-----~~v~~~~r~~~~~~~~ 45 (252)
T PRK06138 6 RVAIVTGAGSGIGRATA-K---LFAREG-----ARVVVADRDAEAAERV 45 (252)
T ss_pred cEEEEeCCCchHHHHHH-H---HHHHCC-----CeEEEecCCHHHHHHH
Confidence 37899999999987543 2 222333 5788888875333333
No 45
>PRK08017 oxidoreductase; Provisional
Probab=42.45 E-value=19 Score=28.28 Aligned_cols=33 Identities=18% Similarity=0.345 Sum_probs=21.8
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
+++|.||+|.++.... -.|.+.| .+|+.++|+.
T Consensus 4 ~vlVtGasg~IG~~la----~~l~~~g-----~~v~~~~r~~ 36 (256)
T PRK08017 4 SVLITGCSSGIGLEAA----LELKRRG-----YRVLAACRKP 36 (256)
T ss_pred EEEEECCCChHHHHHH----HHHHHCC-----CEEEEEeCCH
Confidence 5899999998887543 1222333 4677777764
No 46
>cd03008 TryX_like_RdCVF Tryparedoxin (TryX)-like family, Rod-derived cone viability factor (RdCVF) subfamily; RdCVF is a thioredoxin (TRX)-like protein specifically expressed in photoreceptors. RdCVF was isolated and identified as a factor that supports cone survival in retinal cultures. Cone photoreceptor loss is responsible for the visual handicap resulting from the inherited disease, retinitis pigmentosa. RdCVF shows 33% similarity to TRX but does not exhibit any detectable thiol oxidoreductase activity.
Probab=42.25 E-value=94 Score=24.31 Aligned_cols=56 Identities=7% Similarity=0.158 Sum_probs=41.3
Q ss_pred CCeEEEEEccchhhhhhhhHHHHHHhHHc---CC---CCCCcEEEEEeCCCCChHHHHHHHHh
Q 031491 97 STLSITVVGASGDLAKKKIFPALFALYYE---DC---LPEDFTVFGYARTKLTDEELRNVISK 153 (158)
Q Consensus 97 ~~~s~VIFGATGDLAkRKL~PALf~L~~~---g~---Lp~~~~IIG~aR~~~t~eefr~~v~~ 153 (158)
....+|-|.||-==--|+.+|.|-.+|.+ .. -.+++.||+++..+ +.+++.+++.+
T Consensus 25 gk~vlL~FwAsWCppCr~e~P~L~~ly~~~~~~~~~~~~~~~~vV~Vs~D~-~~~~~~~f~~~ 86 (146)
T cd03008 25 NRVLLLFFGAVVSPQCQLFAPKLKDFFVRLTDEFYVDRSAQLALVYVSMDQ-SEQQQESFLKD 86 (146)
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHHHhhcccccCCCEEEEEEECCC-CHHHHHHHHHH
Confidence 45789999999888899999999988753 11 22469999999643 45666666543
No 47
>PRK09242 tropinone reductase; Provisional
Probab=42.12 E-value=21 Score=28.31 Aligned_cols=43 Identities=16% Similarity=0.029 Sum_probs=26.0
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNV 150 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~ 150 (158)
-.++|.||+|.+++... ..|.+.| .+|+.++|+.-..++..+.
T Consensus 10 k~~lItGa~~gIG~~~a----~~l~~~G-----~~v~~~~r~~~~~~~~~~~ 52 (257)
T PRK09242 10 QTALITGASKGIGLAIA----REFLGLG-----ADVLIVARDADALAQARDE 52 (257)
T ss_pred CEEEEeCCCchHHHHHH----HHHHHcC-----CEEEEEeCCHHHHHHHHHH
Confidence 36899999999986543 2233334 4677777765433444333
No 48
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=41.79 E-value=22 Score=27.76 Aligned_cols=39 Identities=15% Similarity=0.201 Sum_probs=24.1
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEEL 147 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eef 147 (158)
.++|.||+|.++.... . .|.+. +..|+.++|+....++.
T Consensus 5 ~ilItGas~~iG~~la-~---~l~~~-----g~~v~~~~r~~~~~~~~ 43 (250)
T TIGR03206 5 TAIVTGGGGGIGGATC-R---RFAEE-----GAKVAVFDLNREAAEKV 43 (250)
T ss_pred EEEEeCCCChHHHHHH-H---HHHHC-----CCEEEEecCCHHHHHHH
Confidence 5899999999987653 1 22233 34677777765433333
No 49
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=41.67 E-value=57 Score=25.44 Aligned_cols=44 Identities=16% Similarity=0.174 Sum_probs=26.5
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHH
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNV 150 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~ 150 (158)
...++|+||||..++... ..|...| .+|+.++|+.-..+++.+.
T Consensus 28 ~~~vlVlGgtG~iG~~~a----~~l~~~g-----~~V~l~~R~~~~~~~l~~~ 71 (194)
T cd01078 28 GKTAVVLGGTGPVGQRAA----VLLAREG-----ARVVLVGRDLERAQKAADS 71 (194)
T ss_pred CCEEEEECCCCHHHHHHH----HHHHHCC-----CEEEEEcCCHHHHHHHHHH
Confidence 357999999999996443 2333333 3566667865333444443
No 50
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=41.54 E-value=27 Score=27.59 Aligned_cols=43 Identities=16% Similarity=0.090 Sum_probs=26.8
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
.++|.||+|.++.--. - .|... +.+|+.++|+....++..+.+
T Consensus 4 ~ilItG~~~~IG~~la-~---~l~~~-----g~~vi~~~r~~~~~~~~~~~~ 46 (259)
T PRK12384 4 VAVVIGGGQTLGAFLC-H---GLAEE-----GYRVAVADINSEKAANVAQEI 46 (259)
T ss_pred EEEEECCCcHHHHHHH-H---HHHHC-----CCEEEEEECCHHHHHHHHHHH
Confidence 5899999999886543 1 12222 357888888765444444443
No 51
>PRK06125 short chain dehydrogenase; Provisional
Probab=40.89 E-value=22 Score=28.26 Aligned_cols=44 Identities=20% Similarity=0.141 Sum_probs=27.4
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||+|.|++--. .. |... +.+|+.++|+....++..+.+
T Consensus 8 k~vlItG~~~giG~~ia-~~---l~~~-----G~~V~~~~r~~~~~~~~~~~l 51 (259)
T PRK06125 8 KRVLITGASKGIGAAAA-EA---FAAE-----GCHLHLVARDADALEALAADL 51 (259)
T ss_pred CEEEEeCCCchHHHHHH-HH---HHHc-----CCEEEEEeCCHHHHHHHHHHH
Confidence 47999999999986432 22 2223 357888888764444444433
No 52
>PRK07062 short chain dehydrogenase; Provisional
Probab=40.83 E-value=27 Score=27.85 Aligned_cols=43 Identities=14% Similarity=0.010 Sum_probs=27.0
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNV 150 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~ 150 (158)
-.++|.||+|.+++. +.-.| .+. +.+|+.++|++...++..+.
T Consensus 9 k~~lItGas~giG~~-ia~~l---~~~-----G~~V~~~~r~~~~~~~~~~~ 51 (265)
T PRK07062 9 RVAVVTGGSSGIGLA-TVELL---LEA-----GASVAICGRDEERLASAEAR 51 (265)
T ss_pred CEEEEeCCCchHHHH-HHHHH---HHC-----CCeEEEEeCCHHHHHHHHHH
Confidence 378999999999875 32333 223 45788888876444444333
No 53
>PRK06172 short chain dehydrogenase; Provisional
Probab=40.34 E-value=25 Score=27.74 Aligned_cols=43 Identities=19% Similarity=0.165 Sum_probs=27.5
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNV 150 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~ 150 (158)
-.++|.||+|.++..-. ..|.++| .+|+.++|++...++..+.
T Consensus 8 k~ilItGas~~iG~~ia----~~l~~~G-----~~v~~~~r~~~~~~~~~~~ 50 (253)
T PRK06172 8 KVALVTGGAAGIGRATA----LAFAREG-----AKVVVADRDAAGGEETVAL 50 (253)
T ss_pred CEEEEeCCCchHHHHHH----HHHHHcC-----CEEEEEeCCHHHHHHHHHH
Confidence 47899999999987633 2233334 4788888876443444333
No 54
>cd03012 TlpA_like_DipZ_like TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain. Some members show domain architectures similar to that of E. coli DipZ protein (also known as DsbD). The only eukaryotic members of the TlpA family belong to this subfamily. TlpA is a disulfide reductase known to have a crucial role in the biogenesis of cytochrome aa3.
Probab=40.21 E-value=90 Score=22.43 Aligned_cols=55 Identities=9% Similarity=0.057 Sum_probs=38.0
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC----CChHHHHHHHHh
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK----LTDEELRNVISK 153 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~----~t~eefr~~v~~ 153 (158)
...++.|=++.=---+.-+|.|-.|+.+-. ..++.||++...+ .+.++.++++.+
T Consensus 24 k~vvl~F~a~~C~~C~~~~p~l~~l~~~~~-~~~~~vi~i~~~~~~~~~~~~~~~~~~~~ 82 (126)
T cd03012 24 KVVLLDFWTYCCINCLHTLPYLTDLEQKYK-DDGLVVIGVHSPEFAFERDLANVKSAVLR 82 (126)
T ss_pred CEEEEEEECCCCccHHHHHHHHHHHHHHcC-cCCeEEEEeccCccccccCHHHHHHHHHH
Confidence 456677767776666778999999987643 3579999998743 334555555543
No 55
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=40.14 E-value=31 Score=26.88 Aligned_cols=41 Identities=22% Similarity=0.131 Sum_probs=25.7
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELR 148 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr 148 (158)
-.++|.||+|-|+.... .. |... +..|+.++|++-..+++.
T Consensus 8 ~~vlVtG~sg~iG~~l~-~~---L~~~-----G~~Vi~~~r~~~~~~~~~ 48 (239)
T PRK07666 8 KNALITGAGRGIGRAVA-IA---LAKE-----GVNVGLLARTEENLKAVA 48 (239)
T ss_pred CEEEEEcCCchHHHHHH-HH---HHHC-----CCEEEEEeCCHHHHHHHH
Confidence 46899999998887543 22 2223 357888888764434433
No 56
>PRK07060 short chain dehydrogenase; Provisional
Probab=40.05 E-value=21 Score=27.77 Aligned_cols=34 Identities=29% Similarity=0.263 Sum_probs=23.8
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-.++|+||+|.++..-. . .|.+.| ..|+.++|+.
T Consensus 10 ~~~lItGa~g~iG~~~a-~---~l~~~g-----~~V~~~~r~~ 43 (245)
T PRK07060 10 KSVLVTGASSGIGRACA-V---ALAQRG-----ARVVAAARNA 43 (245)
T ss_pred CEEEEeCCcchHHHHHH-H---HHHHCC-----CEEEEEeCCH
Confidence 37899999999987654 2 333344 4688888865
No 57
>PRK06057 short chain dehydrogenase; Provisional
Probab=39.80 E-value=53 Score=26.03 Aligned_cols=39 Identities=13% Similarity=-0.007 Sum_probs=25.5
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEE 146 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~ee 146 (158)
-.++|.||+|-|+.... ..|.+. +..|+.++|++-..++
T Consensus 8 ~~vlItGasggIG~~~a----~~l~~~-----G~~v~~~~r~~~~~~~ 46 (255)
T PRK06057 8 RVAVITGGGSGIGLATA----RRLAAE-----GATVVVGDIDPEAGKA 46 (255)
T ss_pred CEEEEECCCchHHHHHH----HHHHHc-----CCEEEEEeCCHHHHHH
Confidence 47899999999987544 223333 3578888886543333
No 58
>cd02968 SCO SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properti
Probab=39.78 E-value=1.2e+02 Score=21.80 Aligned_cols=57 Identities=12% Similarity=-0.019 Sum_probs=39.6
Q ss_pred CCeEEEEEccchhhh-hhhhHHHHHHhHHcCCCC--CCcEEEEEeCCCC--ChHHHHHHHHh
Q 031491 97 STLSITVVGASGDLA-KKKIFPALFALYYEDCLP--EDFTVFGYARTKL--TDEELRNVISK 153 (158)
Q Consensus 97 ~~~s~VIFGATGDLA-kRKL~PALf~L~~~g~Lp--~~~~IIG~aR~~~--t~eefr~~v~~ 153 (158)
....+|+|.+++.-. -+..+|.|-.++.+=.-. +++.|++++-.+. +.+++++++.+
T Consensus 22 gk~~vl~f~~~~C~~~C~~~l~~l~~~~~~~~~~~~~~v~~v~vs~d~~~d~~~~~~~~~~~ 83 (142)
T cd02968 22 GKPVLVYFGYTHCPDVCPTTLANLAQALKQLGADGGDDVQVVFISVDPERDTPEVLKAYAKA 83 (142)
T ss_pred CCEEEEEEEcCCCcccCHHHHHHHHHHHHHhhHhhcCceEEEEEEECCCCCCHHHHHHHHHH
Confidence 346889999999875 888899999987643111 3599999987553 34555555543
No 59
>PRK07814 short chain dehydrogenase; Provisional
Probab=39.23 E-value=25 Score=28.15 Aligned_cols=42 Identities=24% Similarity=0.164 Sum_probs=25.7
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRN 149 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~ 149 (158)
-.++|.||+|-++.... -.|... +.+|++++|+.-..+++.+
T Consensus 11 ~~vlItGasggIG~~~a----~~l~~~-----G~~Vi~~~r~~~~~~~~~~ 52 (263)
T PRK07814 11 QVAVVTGAGRGLGAAIA----LAFAEA-----GADVLIAARTESQLDEVAE 52 (263)
T ss_pred CEEEEECCCChHHHHHH----HHHHHC-----CCEEEEEeCCHHHHHHHHH
Confidence 36899999999987633 112222 3577888886533344333
No 60
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=39.14 E-value=30 Score=26.80 Aligned_cols=34 Identities=15% Similarity=0.035 Sum_probs=23.0
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-+++|.||+|=++.... . .|.+.| ..|++++|+.
T Consensus 7 ~~ilItGasg~iG~~l~-~---~l~~~g-----~~V~~~~r~~ 40 (251)
T PRK12826 7 RVALVTGAARGIGRAIA-V---RLAADG-----AEVIVVDICG 40 (251)
T ss_pred CEEEEcCCCCcHHHHHH-H---HHHHCC-----CEEEEEeCCH
Confidence 36899999999876543 2 223333 5788888874
No 61
>PRK07035 short chain dehydrogenase; Provisional
Probab=38.78 E-value=26 Score=27.58 Aligned_cols=43 Identities=16% Similarity=0.051 Sum_probs=26.6
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNV 150 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~ 150 (158)
-.++|.||+|.++.... - .|.+.| .+|+.++|+.-..++..+.
T Consensus 9 k~vlItGas~gIG~~l~-~---~l~~~G-----~~Vi~~~r~~~~~~~~~~~ 51 (252)
T PRK07035 9 KIALVTGASRGIGEAIA-K---LLAQQG-----AHVIVSSRKLDGCQAVADA 51 (252)
T ss_pred CEEEEECCCcHHHHHHH-H---HHHHCC-----CEEEEEeCCHHHHHHHHHH
Confidence 36899999999986433 1 223333 5788888865433444443
No 62
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=38.65 E-value=37 Score=28.66 Aligned_cols=41 Identities=22% Similarity=0.244 Sum_probs=26.8
Q ss_pred ccCCCCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCC
Q 031491 93 EKLGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKL 142 (158)
Q Consensus 93 ~~~~~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~ 142 (158)
++.+..-.++|.||+|=++.... ..| ... +..|+++.|...
T Consensus 5 ~~~~~~~~vLVtG~~GfIG~~l~-~~L---~~~-----G~~V~~~~r~~~ 45 (353)
T PLN02896 5 GRESATGTYCVTGATGYIGSWLV-KLL---LQR-----GYTVHATLRDPA 45 (353)
T ss_pred ccccCCCEEEEECCCcHHHHHHH-HHH---HHC-----CCEEEEEeCChH
Confidence 34455568999999998887544 332 233 357888877653
No 63
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=38.04 E-value=40 Score=27.87 Aligned_cols=39 Identities=26% Similarity=0.276 Sum_probs=26.3
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEE 146 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~ee 146 (158)
-.++|.||||-++...+ . .|...| ..|+++.|+....+.
T Consensus 6 ~~vlVTGatG~iG~~l~-~---~L~~~g-----~~V~~~~r~~~~~~~ 44 (322)
T PLN02986 6 KLVCVTGASGYIASWIV-K---LLLLRG-----YTVKATVRDLTDRKK 44 (322)
T ss_pred CEEEEECCCcHHHHHHH-H---HHHHCC-----CEEEEEECCCcchHH
Confidence 37999999999997654 2 333343 578888886654333
No 64
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=37.18 E-value=26 Score=27.78 Aligned_cols=34 Identities=26% Similarity=0.076 Sum_probs=22.3
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-.++|.||+|.++..-. ..|.+.| .+|+.++|+.
T Consensus 13 k~ilItGa~g~IG~~la----~~l~~~G-----~~V~~~~r~~ 46 (259)
T PRK08213 13 KTALVTGGSRGLGLQIA----EALGEAG-----ARVVLSARKA 46 (259)
T ss_pred CEEEEECCCchHHHHHH----HHHHHcC-----CEEEEEeCCH
Confidence 46999999999985421 2222333 4678888865
No 65
>PRK08251 short chain dehydrogenase; Provisional
Probab=36.95 E-value=30 Score=27.11 Aligned_cols=41 Identities=24% Similarity=0.148 Sum_probs=24.5
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRN 149 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~ 149 (158)
.++|.||+|-+++... ..|.+.| ..|+.++|++-..+++.+
T Consensus 4 ~vlItGas~giG~~la----~~l~~~g-----~~v~~~~r~~~~~~~~~~ 44 (248)
T PRK08251 4 KILITGASSGLGAGMA----REFAAKG-----RDLALCARRTDRLEELKA 44 (248)
T ss_pred EEEEECCCCHHHHHHH----HHHHHcC-----CEEEEEeCCHHHHHHHHH
Confidence 5889999999886543 2233333 356667776543344433
No 66
>PRK12939 short chain dehydrogenase; Provisional
Probab=36.80 E-value=40 Score=26.16 Aligned_cols=42 Identities=24% Similarity=0.024 Sum_probs=26.1
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRN 149 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~ 149 (158)
-.++|.||+|-++.... -.|.+.| .+|+.++|++...++..+
T Consensus 8 ~~vlItGa~g~iG~~la----~~l~~~G-----~~v~~~~r~~~~~~~~~~ 49 (250)
T PRK12939 8 KRALVTGAARGLGAAFA----EALAEAG-----ATVAFNDGLAAEARELAA 49 (250)
T ss_pred CEEEEeCCCChHHHHHH----HHHHHcC-----CEEEEEeCCHHHHHHHHH
Confidence 46899999999887543 1223333 567888876543343333
No 67
>cd03010 TlpA_like_DsbE TlpA-like family, DsbE (also known as CcmG and CycY) subfamily; DsbE is a membrane-anchored, periplasmic TRX-like reductase containing a CXXC motif that specifically donates reducing equivalents to apocytochrome c via CcmH, another cytochrome c maturation (Ccm) factor with a redox active CXXC motif. Assembly of cytochrome c requires the ligation of heme to reduced thiols of the apocytochrome. In bacteria, this assembly occurs in the periplasm. The reductase activity of DsbE in the oxidizing environment of the periplasm is crucial in the maturation of cytochrome c.
Probab=36.24 E-value=1.6e+02 Score=20.92 Aligned_cols=50 Identities=18% Similarity=0.114 Sum_probs=38.0
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHH
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIS 152 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~ 152 (158)
...+|.|-|+.--.-+..+|.|-.|.++. ++.||+++-. -+.++.++++.
T Consensus 26 k~vvv~F~a~~C~~C~~~~~~l~~l~~~~----~~~vv~v~~~-~~~~~~~~~~~ 75 (127)
T cd03010 26 KPYLLNVWASWCAPCREEHPVLMALARQG----RVPIYGINYK-DNPENALAWLA 75 (127)
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHhc----CcEEEEEECC-CCHHHHHHHHH
Confidence 45677777999998899999999998764 4999999854 34566666554
No 68
>PRK12829 short chain dehydrogenase; Provisional
Probab=36.12 E-value=30 Score=27.16 Aligned_cols=42 Identities=12% Similarity=0.049 Sum_probs=26.1
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHH
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELR 148 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr 148 (158)
.-.++|.||+|-++.... -.|... +..|++++|+.-..+++.
T Consensus 11 ~~~vlItGa~g~iG~~~a----~~L~~~-----g~~V~~~~r~~~~~~~~~ 52 (264)
T PRK12829 11 GLRVLVTGGASGIGRAIA----EAFAEA-----GARVHVCDVSEAALAATA 52 (264)
T ss_pred CCEEEEeCCCCcHHHHHH----HHHHHC-----CCEEEEEeCCHHHHHHHH
Confidence 357999999999985432 222333 356888888654344433
No 69
>PRK09186 flagellin modification protein A; Provisional
Probab=35.81 E-value=39 Score=26.50 Aligned_cols=43 Identities=21% Similarity=0.200 Sum_probs=26.0
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
.++|.||+|-+++... ..| .+. +.+|++++|+.-..++..+.+
T Consensus 6 ~vlItGas~giG~~~a-~~l---~~~-----g~~v~~~~r~~~~~~~~~~~l 48 (256)
T PRK09186 6 TILITGAGGLIGSALV-KAI---LEA-----GGIVIAADIDKEALNELLESL 48 (256)
T ss_pred EEEEECCCchHHHHHH-HHH---HHC-----CCEEEEEecChHHHHHHHHHH
Confidence 6899999998876432 222 223 357777877664444444443
No 70
>PRK07775 short chain dehydrogenase; Provisional
Probab=35.75 E-value=30 Score=28.02 Aligned_cols=35 Identities=26% Similarity=0.099 Sum_probs=23.2
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKL 142 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~ 142 (158)
-.++|.||+|.|+.. +...| ..+| .+|+.++|+..
T Consensus 11 ~~vlVtGa~g~iG~~-la~~L---~~~G-----~~V~~~~r~~~ 45 (274)
T PRK07775 11 RPALVAGASSGIGAA-TAIEL---AAAG-----FPVALGARRVE 45 (274)
T ss_pred CEEEEECCCchHHHH-HHHHH---HHCC-----CEEEEEeCCHH
Confidence 378999999999865 33333 3333 56777777643
No 71
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=35.75 E-value=32 Score=27.17 Aligned_cols=35 Identities=11% Similarity=-0.048 Sum_probs=22.7
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKL 142 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~ 142 (158)
-.++|.||+|.++..-. ..|.++| .+|+.++|+.-
T Consensus 10 k~~lItGas~giG~~ia----~~L~~~G-----~~vvl~~r~~~ 44 (254)
T PRK08085 10 KNILITGSAQGIGFLLA----TGLAEYG-----AEIIINDITAE 44 (254)
T ss_pred CEEEEECCCChHHHHHH----HHHHHcC-----CEEEEEcCCHH
Confidence 36899999999987543 2333344 46666777643
No 72
>PRK09072 short chain dehydrogenase; Provisional
Probab=35.71 E-value=27 Score=27.85 Aligned_cols=39 Identities=23% Similarity=0.227 Sum_probs=24.1
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEEL 147 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eef 147 (158)
.++|.||+|-|+..-. .. |.+. +..|++++|++-..+++
T Consensus 7 ~vlItG~s~~iG~~ia-~~---l~~~-----G~~V~~~~r~~~~~~~~ 45 (263)
T PRK09072 7 RVLLTGASGGIGQALA-EA---LAAA-----GARLLLVGRNAEKLEAL 45 (263)
T ss_pred EEEEECCCchHHHHHH-HH---HHHC-----CCEEEEEECCHHHHHHH
Confidence 6899999999886432 22 2223 35788888865333333
No 73
>PRK05993 short chain dehydrogenase; Provisional
Probab=35.51 E-value=29 Score=28.22 Aligned_cols=33 Identities=27% Similarity=0.368 Sum_probs=22.4
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
.++|.||+|-+++... -.|... +..|++++|+.
T Consensus 6 ~vlItGasggiG~~la----~~l~~~-----G~~Vi~~~r~~ 38 (277)
T PRK05993 6 SILITGCSSGIGAYCA----RALQSD-----GWRVFATCRKE 38 (277)
T ss_pred EEEEeCCCcHHHHHHH----HHHHHC-----CCEEEEEECCH
Confidence 6899999999986532 122233 46788888864
No 74
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=35.21 E-value=46 Score=26.05 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=22.4
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-.++|.||+|.++.--. ..|..+ +.+|+.++|+.
T Consensus 6 k~vlItGas~gIG~~ia----~~l~~~-----G~~vi~~~r~~ 39 (248)
T TIGR01832 6 KVALVTGANTGLGQGIA----VGLAEA-----GADIVGAGRSE 39 (248)
T ss_pred CEEEEECCCchHHHHHH----HHHHHC-----CCEEEEEcCch
Confidence 36899999999876432 122233 45788888864
No 75
>PRK08643 acetoin reductase; Validated
Probab=34.23 E-value=39 Score=26.66 Aligned_cols=41 Identities=17% Similarity=0.092 Sum_probs=24.8
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRN 149 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~ 149 (158)
.++|.||+|.++.... -.| .+. +.+|+.++|+.-..++...
T Consensus 4 ~~lItGas~giG~~la-~~l---~~~-----G~~v~~~~r~~~~~~~~~~ 44 (256)
T PRK08643 4 VALVTGAGQGIGFAIA-KRL---VED-----GFKVAIVDYNEETAQAAAD 44 (256)
T ss_pred EEEEECCCChHHHHHH-HHH---HHC-----CCEEEEEeCCHHHHHHHHH
Confidence 5789999999987422 222 223 3577778876543344333
No 76
>cd00340 GSH_Peroxidase Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.
Probab=33.53 E-value=2e+02 Score=21.45 Aligned_cols=54 Identities=20% Similarity=0.213 Sum_probs=38.4
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC------CChHHHHHHHHh
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK------LTDEELRNVISK 153 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~------~t~eefr~~v~~ 153 (158)
...+|.|-||.=- -++-+|.|-.|+.+- -..++.|||+...+ -+.++.++++.+
T Consensus 23 k~vvl~fwatwC~-C~~e~p~l~~l~~~~-~~~~~~vv~v~~~~~~~~~~~~~~~~~~f~~~ 82 (152)
T cd00340 23 KVLLIVNVASKCG-FTPQYEGLEALYEKY-KDRGLVVLGFPCNQFGGQEPGSNEEIKEFCET 82 (152)
T ss_pred CEEEEEEEcCCCC-chHHHHHHHHHHHHh-cCCCEEEEEeccCccccCCCCCHHHHHHHHHH
Confidence 4677778888776 567779999998764 23579999998643 234667777654
No 77
>PRK08226 short chain dehydrogenase; Provisional
Probab=33.36 E-value=58 Score=25.78 Aligned_cols=35 Identities=6% Similarity=-0.014 Sum_probs=23.6
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
.-.++|.||+|-++.... .. |.+.| .+|+.++|+.
T Consensus 6 ~~~~lItG~s~giG~~la-~~---l~~~G-----~~Vv~~~r~~ 40 (263)
T PRK08226 6 GKTALITGALQGIGEGIA-RV---FARHG-----ANLILLDISP 40 (263)
T ss_pred CCEEEEeCCCChHHHHHH-HH---HHHCC-----CEEEEecCCH
Confidence 357899999999987633 22 23333 4678888764
No 78
>PRK05867 short chain dehydrogenase; Provisional
Probab=32.39 E-value=38 Score=26.81 Aligned_cols=42 Identities=24% Similarity=0.131 Sum_probs=25.8
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNV 150 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~ 150 (158)
.++|.||+|.++..-. ..|.+.| .+|+.++|+.-..+++.+.
T Consensus 11 ~vlVtGas~gIG~~ia----~~l~~~G-----~~V~~~~r~~~~~~~~~~~ 52 (253)
T PRK05867 11 RALITGASTGIGKRVA----LAYVEAG-----AQVAIAARHLDALEKLADE 52 (253)
T ss_pred EEEEECCCchHHHHHH----HHHHHCC-----CEEEEEcCCHHHHHHHHHH
Confidence 6899999998886543 2333344 4677777765333444333
No 79
>PRK05866 short chain dehydrogenase; Provisional
Probab=32.25 E-value=35 Score=28.39 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=22.9
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-.++|.||+|-+++.-. - .|.+. +..|+.++|+.
T Consensus 41 k~vlItGasggIG~~la-~---~La~~-----G~~Vi~~~R~~ 74 (293)
T PRK05866 41 KRILLTGASSGIGEAAA-E---QFARR-----GATVVAVARRE 74 (293)
T ss_pred CEEEEeCCCcHHHHHHH-H---HHHHC-----CCEEEEEECCH
Confidence 36899999999986543 1 12233 35788888875
No 80
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=32.15 E-value=38 Score=26.23 Aligned_cols=40 Identities=15% Similarity=0.086 Sum_probs=25.8
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEEL 147 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eef 147 (158)
-.++|.||+|-++..-. . .|.+. +..|++++|++...++.
T Consensus 6 ~~vlItGa~g~iG~~~a-~---~l~~~-----G~~V~~~~r~~~~~~~~ 45 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVA-Y---FALKE-----GAQVCINSRNENKLKRM 45 (238)
T ss_pred cEEEEECCCchHHHHHH-H---HHHHC-----CCEEEEEeCCHHHHHHH
Confidence 37899999999886533 2 22233 35888899876433333
No 81
>PRK07904 short chain dehydrogenase; Provisional
Probab=32.14 E-value=1.5e+02 Score=23.82 Aligned_cols=45 Identities=9% Similarity=0.003 Sum_probs=28.1
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCC-hHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLT-DEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t-~eefr~~v 151 (158)
-.++|.||+|-+++-.. ..|...| +..|+.++|++-. .++..+.+
T Consensus 9 ~~vlItGas~giG~~la----~~l~~~g----g~~V~~~~r~~~~~~~~~~~~l 54 (253)
T PRK07904 9 QTILLLGGTSEIGLAIC----ERYLKNA----PARVVLAALPDDPRRDAAVAQM 54 (253)
T ss_pred cEEEEEcCCcHHHHHHH----HHHHhcC----CCeEEEEeCCcchhHHHHHHHH
Confidence 46899999999987632 2233332 3677888887654 44444443
No 82
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=31.71 E-value=40 Score=26.17 Aligned_cols=42 Identities=14% Similarity=0.017 Sum_probs=25.1
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRN 149 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~ 149 (158)
-.++|.||+|.++..- .-.| .+.| .+|+.++|+.-..++..+
T Consensus 6 ~~~lItG~~g~iG~~~-a~~l---~~~G-----~~vi~~~r~~~~~~~~~~ 47 (253)
T PRK08217 6 KVIVITGGAQGLGRAM-AEYL---AQKG-----AKLALIDLNQEKLEEAVA 47 (253)
T ss_pred CEEEEECCCchHHHHH-HHHH---HHCC-----CEEEEEeCCHHHHHHHHH
Confidence 3688999999998652 2222 2233 467888876533333333
No 83
>PRK08628 short chain dehydrogenase; Provisional
Probab=31.36 E-value=47 Score=26.20 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=21.5
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKL 142 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~ 142 (158)
-.++|.||+|.+++... ..|.+.| .+++.++|++.
T Consensus 8 ~~ilItGasggiG~~la----~~l~~~G-----~~v~~~~r~~~ 42 (258)
T PRK08628 8 KVVIVTGGASGIGAAIS----LRLAEEG-----AIPVIFGRSAP 42 (258)
T ss_pred CEEEEeCCCChHHHHHH----HHHHHcC-----CcEEEEcCChh
Confidence 37899999999887543 2223333 34555666543
No 84
>PRK09135 pteridine reductase; Provisional
Probab=31.10 E-value=47 Score=25.68 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=23.3
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKL 142 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~ 142 (158)
-.++|.||+|-|++-.. - .|.+. +..|++++|+..
T Consensus 7 ~~vlItGa~g~iG~~l~-~---~l~~~-----g~~v~~~~r~~~ 41 (249)
T PRK09135 7 KVALITGGARRIGAAIA-R---TLHAA-----GYRVAIHYHRSA 41 (249)
T ss_pred CEEEEeCCCchHHHHHH-H---HHHHC-----CCEEEEEcCCCH
Confidence 47999999998886433 1 12222 467888888643
No 85
>PRK03147 thiol-disulfide oxidoreductase; Provisional
Probab=30.95 E-value=1.9e+02 Score=21.48 Aligned_cols=54 Identities=11% Similarity=0.062 Sum_probs=40.2
Q ss_pred CCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHH
Q 031491 97 STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIS 152 (158)
Q Consensus 97 ~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~ 152 (158)
....+|.|-++..-.-+...|.|-.++.+=. ..++.||++...+ +.+++++++.
T Consensus 61 ~k~~~l~f~a~~C~~C~~~~~~l~~~~~~~~-~~~~~vi~i~~d~-~~~~~~~~~~ 114 (173)
T PRK03147 61 GKGVFLNFWGTWCKPCEKEMPYMNELYPKYK-EKGVEIIAVNVDE-TELAVKNFVN 114 (173)
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhh-cCCeEEEEEEcCC-CHHHHHHHHH
Confidence 3457888889999999999999999996421 2358999998754 4566666654
No 86
>PLN02399 phospholipid hydroperoxide glutathione peroxidase
Probab=30.52 E-value=3.3e+02 Score=22.97 Aligned_cols=53 Identities=15% Similarity=0.196 Sum_probs=39.8
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC------CChHHHHHHH
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK------LTDEELRNVI 151 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~------~t~eefr~~v 151 (158)
...+|.|-|+.-=.-+..+|.|-.|+.+- -..++.|||+...+ -+.++..+.+
T Consensus 100 K~vvl~FwAswCp~c~~e~p~L~~L~~~~-~~~Gv~VIgV~~d~~~~~e~~s~~ei~~f~ 158 (236)
T PLN02399 100 KVLLIVNVASKCGLTSSNYSELSHLYEKY-KTQGFEILAFPCNQFGGQEPGSNPEIKQFA 158 (236)
T ss_pred CeEEEEEEcCCCcchHHHHHHHHHHHHHH-hcCCcEEEEEecccccccCCCCHHHHHHHH
Confidence 46777788998888899999999999753 24579999999653 2345666665
No 87
>PRK07890 short chain dehydrogenase; Provisional
Probab=29.79 E-value=42 Score=26.36 Aligned_cols=44 Identities=20% Similarity=0.086 Sum_probs=26.7
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||+|=+++.-. - .|...| ..|+.++|+....+++.+.+
T Consensus 6 k~vlItGa~~~IG~~la-~---~l~~~G-----~~V~~~~r~~~~~~~~~~~~ 49 (258)
T PRK07890 6 KVVVVSGVGPGLGRTLA-V---RAARAG-----ADVVLAARTAERLDEVAAEI 49 (258)
T ss_pred CEEEEECCCCcHHHHHH-H---HHHHcC-----CEEEEEeCCHHHHHHHHHHH
Confidence 46899999998886432 1 222334 47777887664444444443
No 88
>cd02967 mauD Methylamine utilization (mau) D family; mauD protein is the translation product of the mauD gene found in methylotrophic bacteria, which are able to use methylamine as a sole carbon source and a nitrogen source. mauD is an essential accessory protein for the biosynthesis of methylamine dehydrogenase (MADH), the enzyme that catalyzes the oxidation of methylamine and other primary amines. MADH possesses an alpha2beta2 subunit structure; the alpha subunit is also referred to as the large subunit. Each beta (small) subunit contains a tryptophan tryptophylquinone (TTQ) prosthetic group. Accessory proteins are essential for the proper transport of MADH to the periplasm, TTQ synthesis and the formation of several structural disulfide bonds. Bacterial mutants containing an insertion on the mauD gene were unable to grow on methylamine as a sole carbon source, were found to lack the MADH small subunit and had decreased amounts of the MADH large subunit.
Probab=29.32 E-value=1.9e+02 Score=19.84 Aligned_cols=52 Identities=12% Similarity=0.089 Sum_probs=36.0
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHh
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISK 153 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~ 153 (158)
...+|.|-++.=-.-++.+|.|-.++... ..++.|+++. +.+.++..+++.+
T Consensus 22 k~vvl~F~~~wC~~C~~~~p~l~~~~~~~--~~~~~vi~v~--~~~~~~~~~~~~~ 73 (114)
T cd02967 22 RPTLLFFLSPTCPVCKKLLPVIRSIARAE--ADWLDVVLAS--DGEKAEHQRFLKK 73 (114)
T ss_pred CeEEEEEECCCCcchHhHhHHHHHHHHHh--cCCcEEEEEe--CCCHHHHHHHHHH
Confidence 45666677777777888999999987653 3468888774 3455666666543
No 89
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=29.12 E-value=48 Score=26.64 Aligned_cols=35 Identities=17% Similarity=0.085 Sum_probs=23.2
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKL 142 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~ 142 (158)
-.++|.||+|.++..-. .. |.++| .+|+.++|++-
T Consensus 11 k~vlVtGas~giG~~ia-~~---l~~~G-----~~V~~~~r~~~ 45 (278)
T PRK08277 11 KVAVITGGGGVLGGAMA-KE---LARAG-----AKVAILDRNQE 45 (278)
T ss_pred CEEEEeCCCchHHHHHH-HH---HHHCC-----CEEEEEeCCHH
Confidence 47899999999886543 22 23344 46777777643
No 90
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=29.01 E-value=43 Score=28.53 Aligned_cols=49 Identities=24% Similarity=0.356 Sum_probs=29.2
Q ss_pred EEEEEccchhhhhhhhHHHHHHhH-----------HcCCCCCC--cEEEEEeCCCCChHHHHHHHHh
Q 031491 100 SITVVGASGDLAKKKIFPALFALY-----------YEDCLPED--FTVFGYARTKLTDEELRNVISK 153 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~-----------~~g~Lp~~--~~IIG~aR~~~t~eefr~~v~~ 153 (158)
.|.|+||||| -|+|...|-..- ....++.. ..++ . ..++.+++.+.+++
T Consensus 2 ~ILvlGGT~e--gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~-~--g~l~~~~l~~~l~~ 63 (256)
T TIGR00715 2 TVLLMGGTVD--SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVH-T--GALDPQELREFLKR 63 (256)
T ss_pred eEEEEechHH--HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEE-E--CCCCHHHHHHHHHh
Confidence 5899999999 677777775321 11122221 1233 2 24677888787765
No 91
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=28.37 E-value=38 Score=24.27 Aligned_cols=17 Identities=35% Similarity=0.532 Sum_probs=13.4
Q ss_pred CeEEEEEccchhhhhhhh
Q 031491 98 TLSITVVGASGDLAKKKI 115 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL 115 (158)
.-.++|+|+ |+.|.||+
T Consensus 7 ~~~vlVvGg-G~va~~k~ 23 (103)
T PF13241_consen 7 GKRVLVVGG-GPVAARKA 23 (103)
T ss_dssp T-EEEEEEE-SHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHH
Confidence 346788888 99999997
No 92
>PRK08862 short chain dehydrogenase; Provisional
Probab=28.06 E-value=60 Score=25.97 Aligned_cols=44 Identities=9% Similarity=-0.042 Sum_probs=26.5
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||++.+++.-. ..|.+. +.+|+.++|+.-..++..+.+
T Consensus 6 k~~lVtGas~GIG~aia----~~la~~-----G~~V~~~~r~~~~l~~~~~~i 49 (227)
T PRK08862 6 SIILITSAGSVLGRTIS----CHFARL-----GATLILCDQDQSALKDTYEQC 49 (227)
T ss_pred eEEEEECCccHHHHHHH----HHHHHC-----CCEEEEEcCCHHHHHHHHHHH
Confidence 36899999998876522 122333 357787888654444444443
No 93
>PLN02650 dihydroflavonol-4-reductase
Probab=27.98 E-value=66 Score=27.08 Aligned_cols=37 Identities=24% Similarity=0.260 Sum_probs=24.5
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDE 145 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~e 145 (158)
.++|.||||=++...+ ..| ... +..|+++.|+....+
T Consensus 7 ~iLVTGatGfIGs~l~-~~L---~~~-----G~~V~~~~r~~~~~~ 43 (351)
T PLN02650 7 TVCVTGASGFIGSWLV-MRL---LER-----GYTVRATVRDPANVK 43 (351)
T ss_pred EEEEeCCcHHHHHHHH-HHH---HHC-----CCEEEEEEcCcchhH
Confidence 6999999999887644 333 223 457877777654333
No 94
>PRK07109 short chain dehydrogenase; Provisional
Probab=27.95 E-value=46 Score=28.41 Aligned_cols=44 Identities=23% Similarity=0.169 Sum_probs=27.9
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||+|-+++.-. ..|.+.| .+|+.++|++-..++..+.+
T Consensus 9 k~vlITGas~gIG~~la----~~la~~G-----~~Vvl~~R~~~~l~~~~~~l 52 (334)
T PRK07109 9 QVVVITGASAGVGRATA----RAFARRG-----AKVVLLARGEEGLEALAAEI 52 (334)
T ss_pred CEEEEECCCCHHHHHHH----HHHHHCC-----CEEEEEECCHHHHHHHHHHH
Confidence 47999999999987532 2233344 56787888754444444443
No 95
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=27.92 E-value=46 Score=26.35 Aligned_cols=39 Identities=10% Similarity=-0.030 Sum_probs=23.7
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEE 146 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~ee 146 (158)
-.++|.||+|.|+..-. .. |.+. +.+|+.++|+.-..++
T Consensus 7 ~~vlItGas~~iG~~ia-~~---l~~~-----G~~v~~~~r~~~~~~~ 45 (257)
T PRK07067 7 KVALLTGAASGIGEAVA-ER---YLAE-----GARVVIADIKPARARL 45 (257)
T ss_pred CEEEEeCCCchHHHHHH-HH---HHHc-----CCEEEEEcCCHHHHHH
Confidence 36899999999986422 22 2223 3567777775533333
No 96
>PRK08264 short chain dehydrogenase; Validated
Probab=27.82 E-value=40 Score=26.20 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=22.4
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-+++|.||+|-+++.-. .. |.+.|. -+|+.++|+.
T Consensus 7 ~~vlItGgsg~iG~~la-~~---l~~~G~----~~V~~~~r~~ 41 (238)
T PRK08264 7 KVVLVTGANRGIGRAFV-EQ---LLARGA----AKVYAAARDP 41 (238)
T ss_pred CEEEEECCCchHHHHHH-HH---HHHCCc----ccEEEEecCh
Confidence 47999999999997643 22 233442 1566666653
No 97
>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]
Probab=27.79 E-value=1.5e+02 Score=27.47 Aligned_cols=46 Identities=24% Similarity=0.455 Sum_probs=32.9
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHh
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISK 153 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~ 153 (158)
.++|+|+||-....-| .+.+. .|+.|+|+|.+-.. ..+.+.+++++
T Consensus 3 ~i~iLGSTGSIG~qtL-----dVi~~--~p~~f~vval~ag~-n~~~l~~q~~~ 48 (385)
T COG0743 3 KLTILGSTGSIGTQTL-----DVIRR--NPDKFEVVALAAGK-NVELLAEQIRE 48 (385)
T ss_pred eEEEEecCCchhHHHH-----HHHHh--CCCcEEEEEEecCC-cHHHHHHHHHH
Confidence 5899999999887654 33333 47789999998665 55666666654
No 98
>PTZ00056 glutathione peroxidase; Provisional
Probab=27.73 E-value=2.1e+02 Score=23.03 Aligned_cols=55 Identities=15% Similarity=0.129 Sum_probs=40.5
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC------CChHHHHHHHHh
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK------LTDEELRNVISK 153 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~------~t~eefr~~v~~ 153 (158)
...+|.|=||---.-++-+|.|-.|++.-. ..++.|||+...+ -+.++.++++.+
T Consensus 40 kvvlv~fwAswC~~C~~e~p~L~~l~~~~~-~~g~~vvgv~~~~~~~~e~d~~e~~~~f~~~ 100 (199)
T PTZ00056 40 KVLMITNSASKCGLTKKHVDQMNRLHSVFN-PLGLEILAFPTSQFLNQEFPNTKDIRKFNDK 100 (199)
T ss_pred CEEEEEEECCCCCChHHHHHHHHHHHHHHh-cCceEEEEecchhccCCCCCCHHHHHHHHHH
Confidence 467888888887777888999999997632 3579999998643 234667776654
No 99
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=27.71 E-value=71 Score=24.42 Aligned_cols=16 Identities=25% Similarity=0.281 Sum_probs=13.2
Q ss_pred EEEEEccchhhhhhhh
Q 031491 100 SITVVGASGDLAKKKI 115 (158)
Q Consensus 100 s~VIFGATGDLAkRKL 115 (158)
.++|.||||.++....
T Consensus 8 ~vlItGasg~iG~~l~ 23 (249)
T PRK12825 8 VALVTGAARGLGRAIA 23 (249)
T ss_pred EEEEeCCCchHHHHHH
Confidence 7899999999887543
No 100
>PRK08265 short chain dehydrogenase; Provisional
Probab=27.64 E-value=67 Score=25.75 Aligned_cols=34 Identities=15% Similarity=-0.054 Sum_probs=22.8
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-.++|.||+|.+++.-. . .|.++| .+|+.++|+.
T Consensus 7 k~vlItGas~gIG~~ia-~---~l~~~G-----~~V~~~~r~~ 40 (261)
T PRK08265 7 KVAIVTGGATLIGAAVA-R---ALVAAG-----ARVAIVDIDA 40 (261)
T ss_pred CEEEEECCCChHHHHHH-H---HHHHCC-----CEEEEEeCCH
Confidence 47899999999887644 2 223344 4677777765
No 101
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=27.52 E-value=48 Score=29.16 Aligned_cols=35 Identities=31% Similarity=0.479 Sum_probs=23.2
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
...++|+||||-++..-+ ..| ...| ..|+++.|..
T Consensus 60 ~~kVLVtGatG~IG~~l~-~~L---l~~G-----~~V~~l~R~~ 94 (390)
T PLN02657 60 DVTVLVVGATGYIGKFVV-REL---VRRG-----YNVVAVAREK 94 (390)
T ss_pred CCEEEEECCCcHHHHHHH-HHH---HHCC-----CEEEEEEech
Confidence 357999999999987543 333 3333 5677777754
No 102
>PRK06182 short chain dehydrogenase; Validated
Probab=27.29 E-value=45 Score=26.82 Aligned_cols=33 Identities=33% Similarity=0.412 Sum_probs=22.3
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
.++|.||+|-+++.-. ..|... +..|++++|+.
T Consensus 5 ~vlItGasggiG~~la----~~l~~~-----G~~V~~~~r~~ 37 (273)
T PRK06182 5 VALVTGASSGIGKATA----RRLAAQ-----GYTVYGAARRV 37 (273)
T ss_pred EEEEECCCChHHHHHH----HHHHHC-----CCEEEEEeCCH
Confidence 6899999999987632 222333 35788888764
No 103
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=26.86 E-value=91 Score=28.89 Aligned_cols=46 Identities=24% Similarity=0.394 Sum_probs=32.6
Q ss_pred cCCCCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHH
Q 031491 94 KLGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELR 148 (158)
Q Consensus 94 ~~~~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr 148 (158)
....+.++.++||||=.+++-. +.++..+|.+.+.-|+.-..+++.
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv---------~~llkrgf~vra~VRd~~~a~~~~ 120 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIV---------KILLKRGFSVRALVRDEQKAEDLL 120 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHH---------HHHHHCCCeeeeeccChhhhhhhh
Confidence 3445778999999999887633 444444588999988776655553
No 104
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=26.71 E-value=78 Score=25.10 Aligned_cols=34 Identities=15% Similarity=0.048 Sum_probs=21.9
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCC
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYART 140 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~ 140 (158)
.-.++|.||+|.++..-. ..|... +.+++.++|+
T Consensus 15 ~k~vlItGas~gIG~~ia----~~l~~~-----G~~v~~~~~~ 48 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYA----VALAKA-----GADIIITTHG 48 (258)
T ss_pred CCEEEEeCCCchHHHHHH----HHHHHC-----CCEEEEEeCC
Confidence 357999999999985432 122233 3567777776
No 105
>PF11313 DUF3116: Protein of unknown function (DUF3116); InterPro: IPR021464 This family of proteins with unknown function appears to be restricted to Bacillales.
Probab=26.66 E-value=26 Score=25.83 Aligned_cols=29 Identities=10% Similarity=0.161 Sum_probs=27.1
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCC
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCL 128 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~L 128 (158)
.++.|++.+|+++..|+=++|+|...|.+
T Consensus 29 e~~~~~~~~~~TKNelL~~vYWLE~ngyI 57 (85)
T PF11313_consen 29 EFIDFPGAYDFTKNELLYTVYWLEENGYI 57 (85)
T ss_pred HHHhccccccccHHHHHHHHHHHhhcCee
Confidence 47899999999999999999999999986
No 106
>PRK08339 short chain dehydrogenase; Provisional
Probab=26.51 E-value=54 Score=26.53 Aligned_cols=43 Identities=14% Similarity=-0.004 Sum_probs=26.5
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
.++|.||+|.+++.-. ..|.++| .+|+.++|+.-..++..+.+
T Consensus 10 ~~lItGas~gIG~aia----~~l~~~G-----~~V~~~~r~~~~~~~~~~~~ 52 (263)
T PRK08339 10 LAFTTASSKGIGFGVA----RVLARAG-----ADVILLSRNEENLKKAREKI 52 (263)
T ss_pred EEEEeCCCCcHHHHHH----HHHHHCC-----CEEEEEeCCHHHHHHHHHHH
Confidence 6789999999887532 2233344 56777888654444444443
No 107
>PRK06500 short chain dehydrogenase; Provisional
Probab=26.47 E-value=47 Score=25.86 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=22.0
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-.++|.||+|-+++.-. ..| ... +.+|+.++|+.
T Consensus 7 k~vlItGasg~iG~~la-~~l---~~~-----g~~v~~~~r~~ 40 (249)
T PRK06500 7 KTALITGGTSGIGLETA-RQF---LAE-----GARVAITGRDP 40 (249)
T ss_pred CEEEEeCCCchHHHHHH-HHH---HHC-----CCEEEEecCCH
Confidence 36999999999886533 222 223 35677777753
No 108
>PRK07825 short chain dehydrogenase; Provisional
Probab=25.96 E-value=47 Score=26.62 Aligned_cols=34 Identities=12% Similarity=-0.014 Sum_probs=21.7
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-.++|.||||-+++... - .|...| ..|+.++|++
T Consensus 6 ~~ilVtGasggiG~~la-~---~l~~~G-----~~v~~~~r~~ 39 (273)
T PRK07825 6 KVVAITGGARGIGLATA-R---ALAALG-----ARVAIGDLDE 39 (273)
T ss_pred CEEEEeCCCchHHHHHH-H---HHHHCC-----CEEEEEECCH
Confidence 36899999999987543 1 122333 4566677754
No 109
>PRK07063 short chain dehydrogenase; Provisional
Probab=25.49 E-value=79 Score=25.02 Aligned_cols=44 Identities=18% Similarity=0.010 Sum_probs=26.9
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||+|-++..-. ..|... +.+|+.++|++-..++..+.+
T Consensus 8 k~vlVtGas~gIG~~~a----~~l~~~-----G~~vv~~~r~~~~~~~~~~~~ 51 (260)
T PRK07063 8 KVALVTGAAQGIGAAIA----RAFARE-----GAAVALADLDAALAERAAAAI 51 (260)
T ss_pred CEEEEECCCchHHHHHH----HHHHHC-----CCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998885422 222333 357888888654444444444
No 110
>PRK06196 oxidoreductase; Provisional
Probab=25.38 E-value=53 Score=27.35 Aligned_cols=35 Identities=23% Similarity=0.072 Sum_probs=24.0
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKL 142 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~ 142 (158)
-.++|.||+|-++.... ..|.+.| .+|++++|+.-
T Consensus 27 k~vlITGasggIG~~~a----~~L~~~G-----~~Vv~~~R~~~ 61 (315)
T PRK06196 27 KTAIVTGGYSGLGLETT----RALAQAG-----AHVIVPARRPD 61 (315)
T ss_pred CEEEEeCCCchHHHHHH----HHHHHCC-----CEEEEEeCCHH
Confidence 47999999998886543 2233333 57888888753
No 111
>PRK08589 short chain dehydrogenase; Validated
Probab=25.09 E-value=69 Score=25.90 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=21.5
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCC
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYART 140 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~ 140 (158)
.++|.||+|.+++--. ..|... +.+|+.++|+
T Consensus 8 ~vlItGas~gIG~aia----~~l~~~-----G~~vi~~~r~ 39 (272)
T PRK08589 8 VAVITGASTGIGQASA----IALAQE-----GAYVLAVDIA 39 (272)
T ss_pred EEEEECCCchHHHHHH----HHHHHC-----CCEEEEEeCc
Confidence 6899999999886322 122233 4578888887
No 112
>PRK07577 short chain dehydrogenase; Provisional
Probab=25.03 E-value=59 Score=25.10 Aligned_cols=32 Identities=25% Similarity=0.324 Sum_probs=20.6
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCC
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYART 140 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~ 140 (158)
.++|.||+|-|+..-. ..|.+.| .+|++++|+
T Consensus 5 ~vlItG~s~~iG~~ia----~~l~~~G-----~~v~~~~r~ 36 (234)
T PRK07577 5 TVLVTGATKGIGLALS----LRLANLG-----HQVIGIARS 36 (234)
T ss_pred EEEEECCCCcHHHHHH----HHHHHCC-----CEEEEEeCC
Confidence 5789999999987542 1223333 466666664
No 113
>PRK07831 short chain dehydrogenase; Provisional
Probab=24.88 E-value=68 Score=25.50 Aligned_cols=44 Identities=14% Similarity=0.014 Sum_probs=24.2
Q ss_pred eEEEEEccch-hhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASG-DLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATG-DLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||+| .++..-. -.|...| .+|+.++|++-..++..+.+
T Consensus 18 k~vlItG~sg~gIG~~ia----~~l~~~G-----~~V~~~~~~~~~~~~~~~~~ 62 (262)
T PRK07831 18 KVVLVTAAAGTGIGSATA----RRALEEG-----ARVVISDIHERRLGETADEL 62 (262)
T ss_pred CEEEEECCCcccHHHHHH----HHHHHcC-----CEEEEEeCCHHHHHHHHHHH
Confidence 3689999997 7875433 1222333 34666666554334444333
No 114
>PF05930 Phage_AlpA: Prophage CP4-57 regulatory protein (AlpA); InterPro: IPR010260 This entry is represents phage P4, Orf88. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. In Escherichia coli phage P4 Orf 88 is similar to AlpA of the CP4-57 cryptic prophage []. AlpA acts as a positive transcriptional regulator of slpA, a gene linked to alpA and necessary for suppression of lon mutants [, ]. The sequence of slpA suggests that it encodes an integrase gene closely related to phage P4 int and that both alpA and slpA are part of a cryptic P4-like prophage. Increase in alpA expression increases SlpA synthesis. Increased SlpA leads, in turn, to the excision and loss of the cryptic prophage. ; PDB: 1Z4H_A.
Probab=24.67 E-value=13 Score=23.80 Aligned_cols=33 Identities=12% Similarity=0.311 Sum_probs=13.3
Q ss_pred HHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHH
Q 031491 117 PALFALYYEDCLPEDFTVFGYARTKLTDEELRNV 150 (158)
Q Consensus 117 PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~ 150 (158)
-.+|.+.++|.+|..++| |-.+.-|..+|..++
T Consensus 18 ~ti~~~~k~g~FP~pvkl-g~r~~~W~~~eV~~W 50 (51)
T PF05930_consen 18 STIYRLIKDGKFPKPVKL-GGRAVRWRESEVEAW 50 (51)
T ss_dssp HHHHHHHHHHH---SEES-SS-------------
T ss_pred HHHHHHHhcccCCCCEEE-CCCcccccccccccc
Confidence 368999999999988885 322345666665554
No 115
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=24.51 E-value=51 Score=25.78 Aligned_cols=16 Identities=19% Similarity=0.225 Sum_probs=13.2
Q ss_pred eEEEEEccchhhhhhh
Q 031491 99 LSITVVGASGDLAKKK 114 (158)
Q Consensus 99 ~s~VIFGATGDLAkRK 114 (158)
-.++|.||+|.++...
T Consensus 9 k~vlItGas~~iG~~l 24 (252)
T PRK08220 9 KTVWVTGAAQGIGYAV 24 (252)
T ss_pred CEEEEeCCCchHHHHH
Confidence 3689999999998764
No 116
>TIGR00385 dsbE periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily. Involved in the biogenesis of c-type cytochromes as well as in disulfide bond formation in some periplasmic proteins.
Probab=24.44 E-value=3.3e+02 Score=20.88 Aligned_cols=50 Identities=14% Similarity=0.066 Sum_probs=36.2
Q ss_pred CCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHH
Q 031491 97 STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIS 152 (158)
Q Consensus 97 ~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~ 152 (158)
....+|.|-|+.--.-++..|.|-.++.. ++.||++...+ +.++.++++.
T Consensus 63 gk~vll~F~a~wC~~C~~~~p~l~~l~~~-----~~~vi~V~~~~-~~~~~~~~~~ 112 (173)
T TIGR00385 63 GKPVLLNVWASWCPPCRAEHPYLNELAKD-----GLPIVGVDYKD-QSQNALKFLK 112 (173)
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHc-----CCEEEEEECCC-ChHHHHHHHH
Confidence 45788888888888888999999988764 48899998643 2344444443
No 117
>PRK07201 short chain dehydrogenase; Provisional
Probab=24.33 E-value=55 Score=30.00 Aligned_cols=41 Identities=24% Similarity=0.258 Sum_probs=26.8
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRN 149 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~ 149 (158)
.++|.||+|-+++... ..|.+.| .+|+.++|++-..++..+
T Consensus 373 ~vlItGas~giG~~la----~~l~~~G-----~~V~~~~r~~~~~~~~~~ 413 (657)
T PRK07201 373 VVLITGASSGIGRATA----IKVAEAG-----ATVFLVARNGEALDELVA 413 (657)
T ss_pred EEEEeCCCCHHHHHHH----HHHHHCC-----CEEEEEECCHHHHHHHHH
Confidence 6999999999997644 2233344 578888887543344333
No 118
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=24.27 E-value=70 Score=25.57 Aligned_cols=43 Identities=12% Similarity=-0.135 Sum_probs=25.2
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNV 150 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~ 150 (158)
-.++|.||+|.+++--. ..|... +.+|+.++|++...++..+.
T Consensus 11 k~~lItGa~~~iG~~ia----~~l~~~-----G~~vv~~~~~~~~~~~~~~~ 53 (265)
T PRK07097 11 KIALITGASYGIGFAIA----KAYAKA-----GATIVFNDINQELVDKGLAA 53 (265)
T ss_pred CEEEEeCCCchHHHHHH----HHHHHC-----CCeEEEEeCCHHHHHHHHHH
Confidence 47999999998885221 122222 35677777766444444433
No 119
>PRK08219 short chain dehydrogenase; Provisional
Probab=24.25 E-value=44 Score=25.54 Aligned_cols=32 Identities=19% Similarity=0.161 Sum_probs=20.5
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
.++|.||+|-|+..-. ..|- + + ..|++++|+.
T Consensus 5 ~vlVtG~~g~iG~~l~-~~l~----~----~-~~V~~~~r~~ 36 (227)
T PRK08219 5 TALITGASRGIGAAIA-RELA----P----T-HTLLLGGRPA 36 (227)
T ss_pred EEEEecCCcHHHHHHH-HHHH----h----h-CCEEEEeCCH
Confidence 6899999998875432 2221 1 1 3577777764
No 120
>PRK06198 short chain dehydrogenase; Provisional
Probab=24.06 E-value=61 Score=25.54 Aligned_cols=35 Identities=14% Similarity=0.014 Sum_probs=22.4
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcE-EEEEeCCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFT-VFGYARTKL 142 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~-IIG~aR~~~ 142 (158)
-.++|.||+|-++.... ..|...| .+ |+.++|+.-
T Consensus 7 k~vlItGa~g~iG~~la----~~l~~~G-----~~~V~~~~r~~~ 42 (260)
T PRK06198 7 KVALVTGGTQGLGAAIA----RAFAERG-----AAGLVICGRNAE 42 (260)
T ss_pred cEEEEeCCCchHHHHHH----HHHHHCC-----CCeEEEEcCCHH
Confidence 46889999998887543 2233344 34 777777643
No 121
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=23.82 E-value=57 Score=26.03 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=21.8
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-.++|.||+|.++.--. -.|.+. +.+|+.++|+.
T Consensus 6 k~vlItGas~gIG~~ia----~~l~~~-----G~~V~~~~r~~ 39 (262)
T TIGR03325 6 EVVLVTGGASGLGRAIV----DRFVAE-----GARVAVLDKSA 39 (262)
T ss_pred cEEEEECCCChHHHHHH----HHHHHC-----CCEEEEEeCCH
Confidence 46899999999885432 122233 45677777754
No 122
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=23.52 E-value=1.6e+02 Score=22.67 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=21.0
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCC
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYART 140 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~ 140 (158)
.++|.||+|.|+.. +...| .+.| .+|++++|+
T Consensus 4 ~vlItG~s~~iG~~-la~~l---~~~g-----~~vi~~~r~ 35 (245)
T PRK12824 4 IALVTGAKRGIGSA-IAREL---LNDG-----YRVIATYFS 35 (245)
T ss_pred EEEEeCCCchHHHH-HHHHH---HHcC-----CEEEEEeCC
Confidence 57999999999876 33333 2223 467777766
No 123
>cd03018 PRX_AhpE_like Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE. AhpE is described as a 1-cys PRX because of the absence of a resolving cysteine. The structure and sequence of AhpE, however, show greater similarity to 2-cys PRXs than 1-cys PRXs. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. The first step of catalysis is the nucleophilic attack by the peroxidatic cysteine on the peroxide leading to the formation of a cysteine sulfenic acid intermediate. The absence of a resolving cysteine suggests that functional AhpE is regenerated by an external reductant. The solution behavior and crystal structure of AhpE show that it forms dimers and octamers.
Probab=23.00 E-value=2.8e+02 Score=19.99 Aligned_cols=53 Identities=13% Similarity=-0.068 Sum_probs=34.7
Q ss_pred CCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHH
Q 031491 97 STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIS 152 (158)
Q Consensus 97 ~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~ 152 (158)
..+.++.|.|+.--.-++-+|.|-.++.+-. ..++.||+++-.+ .+..+++++
T Consensus 29 k~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~-~~~v~vi~vs~d~--~~~~~~~~~ 81 (149)
T cd03018 29 KPVVLVFFPLAFTPVCTKELCALRDSLELFE-AAGAEVLGISVDS--PFSLRAWAE 81 (149)
T ss_pred CeEEEEEeCCCCCccHHHHHHHHHHHHHHHH-hCCCEEEEecCCC--HHHHHHHHH
Confidence 3455666656655555778899998886532 3579999998543 445555544
No 124
>PRK06180 short chain dehydrogenase; Provisional
Probab=22.91 E-value=59 Score=26.31 Aligned_cols=33 Identities=18% Similarity=0.275 Sum_probs=21.3
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
.++|.||+|-+++... .. |.+. +.+|++++|+.
T Consensus 6 ~vlVtGasggiG~~la-~~---l~~~-----G~~V~~~~r~~ 38 (277)
T PRK06180 6 TWLITGVSSGFGRALA-QA---ALAA-----GHRVVGTVRSE 38 (277)
T ss_pred EEEEecCCChHHHHHH-HH---HHhC-----cCEEEEEeCCH
Confidence 5899999998876543 22 2223 35677777754
No 125
>PRK07024 short chain dehydrogenase; Provisional
Probab=22.83 E-value=50 Score=26.28 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=20.3
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
+++|.||+|-|+..-. - .|.+.| .+|+.++|+.
T Consensus 4 ~vlItGas~gIG~~la-~---~l~~~G-----~~v~~~~r~~ 36 (257)
T PRK07024 4 KVFITGASSGIGQALA-R---EYARQG-----ATLGLVARRT 36 (257)
T ss_pred EEEEEcCCcHHHHHHH-H---HHHHCC-----CEEEEEeCCH
Confidence 5889999998886543 1 222333 4566666654
No 126
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=22.80 E-value=1.8e+02 Score=23.11 Aligned_cols=47 Identities=19% Similarity=0.101 Sum_probs=24.4
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
.++|.||+|-++.... -.|-.. ...++..|+.++|+.-..++..+.+
T Consensus 2 ~vlItGas~GIG~~~a-~~la~~----~~~~g~~V~~~~r~~~~~~~~~~~l 48 (256)
T TIGR01500 2 VCLVTGASRGFGRTIA-QELAKC----LKSPGSVLVLSARNDEALRQLKAEI 48 (256)
T ss_pred EEEEecCCCchHHHHH-HHHHHh----hccCCcEEEEEEcCHHHHHHHHHHH
Confidence 4678899888876322 122111 1112466777777654334444433
No 127
>cd02970 PRX_like2 Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these proteins do not contain the other two residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. TRXs alter the redox state of target proteins by catalyzing the reduction of their disulfide bonds via the CXXC motif using reducing equivalents derived from either NADPH or ferredoxins.
Probab=22.78 E-value=2.5e+02 Score=19.96 Aligned_cols=44 Identities=11% Similarity=-0.002 Sum_probs=34.9
Q ss_pred CCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 97 STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 97 ~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
.++.++.|-+++--.-+.-+|.|..++.+-. ..++.||+++..+
T Consensus 24 ~~~vl~f~~~~~Cp~C~~~~~~l~~~~~~~~-~~~v~vv~V~~~~ 67 (149)
T cd02970 24 GPVVVVFYRGFGCPFCREYLRALSKLLPELD-ALGVELVAVGPES 67 (149)
T ss_pred CCEEEEEECCCCChhHHHHHHHHHHHHHHHH-hcCeEEEEEeCCC
Confidence 4677777789998888899999999887642 3469999998765
No 128
>PRK07576 short chain dehydrogenase; Provisional
Probab=22.70 E-value=71 Score=25.72 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=22.0
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-.++|.||+|.++.--. -.|... +..|+.++|++
T Consensus 10 k~ilItGasggIG~~la----~~l~~~-----G~~V~~~~r~~ 43 (264)
T PRK07576 10 KNVVVVGGTSGINLGIA----QAFARA-----GANVAVASRSQ 43 (264)
T ss_pred CEEEEECCCchHHHHHH----HHHHHC-----CCEEEEEeCCH
Confidence 37899999999887432 112222 35678888764
No 129
>PRK12743 oxidoreductase; Provisional
Probab=22.66 E-value=96 Score=24.61 Aligned_cols=14 Identities=14% Similarity=0.233 Sum_probs=12.2
Q ss_pred EEEEEccchhhhhh
Q 031491 100 SITVVGASGDLAKK 113 (158)
Q Consensus 100 s~VIFGATGDLAkR 113 (158)
+++|.||+|.|+..
T Consensus 4 ~vlItGas~giG~~ 17 (256)
T PRK12743 4 VAIVTASDSGIGKA 17 (256)
T ss_pred EEEEECCCchHHHH
Confidence 68999999999965
No 130
>PRK05855 short chain dehydrogenase; Validated
Probab=22.51 E-value=70 Score=28.18 Aligned_cols=44 Identities=16% Similarity=0.197 Sum_probs=27.8
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHH
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNV 150 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~ 150 (158)
.-.++|.||+|-|++... ..|... +.+|+.++|+.-..++..+.
T Consensus 315 ~~~~lv~G~s~giG~~~a----~~l~~~-----G~~v~~~~r~~~~~~~~~~~ 358 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETA----LAFARE-----GAEVVASDIDEAAAERTAEL 358 (582)
T ss_pred CCEEEEECCcCHHHHHHH----HHHHHC-----CCEEEEEeCCHHHHHHHHHH
Confidence 357899999999998643 223333 35688888865433444333
No 131
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=22.37 E-value=66 Score=25.09 Aligned_cols=15 Identities=27% Similarity=0.297 Sum_probs=12.8
Q ss_pred eEEEEEccchhhhhh
Q 031491 99 LSITVVGASGDLAKK 113 (158)
Q Consensus 99 ~s~VIFGATGDLAkR 113 (158)
-.++|+||+|.++..
T Consensus 5 ~~vlItGa~g~iG~~ 19 (250)
T PRK08063 5 KVALVTGSSRGIGKA 19 (250)
T ss_pred CEEEEeCCCchHHHH
Confidence 379999999999875
No 132
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=22.24 E-value=2.9e+02 Score=25.00 Aligned_cols=54 Identities=19% Similarity=0.182 Sum_probs=39.5
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHhh
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISKM 154 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~~ 154 (158)
...-|+.|=|||=++|-| =+|-.|.+.. .++++||.-=-=+..+++|++.|.+.
T Consensus 145 ~~~tIlvGNSgd~SN~Hi-e~L~~l~~~~--~~~v~ii~PlsYp~gn~~Yi~~V~~~ 198 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHI-EALRALHQQF--GDNVKIIVPMGYPANNQAYIEEVRQA 198 (322)
T ss_pred CceEEEEeCCCCCcccHH-HHHHHHHHHh--CCCeEEEEECCcCCCCHHHHHHHHHH
Confidence 346678999999999987 6888887763 45788885422233568899988764
No 133
>PF05741 zf-nanos: Nanos RNA binding domain; InterPro: IPR024161 Nanos is a highly conserved RNA-binding protein in higher eukaryotes and functions as a key regulatory protein in translational control using a 3' untranslated region during the development and maintenance of germ cells. Nanos comprises a non-conserved amino-terminus and highly conserved carboxy- terminal regions. The C-terminal region has two conserved Cys-Cys-His-Cys (CCHC)-type zinc-finger motifs that are indispensable for nanos function [, , ]. The structure of the nanos-type zinc finger is composed of two independent zinc-finger (ZF) lobes, the N-terminal ZF1 and the C-terminal ZF2, which are connected by a linker helix []. These lobes create a large cleft. Zinc ions in ZF1 and ZF2 are bound to the CCHC motif by tetrahedral coordination.; PDB: 3ALR_B.
Probab=22.13 E-value=35 Score=23.23 Aligned_cols=13 Identities=38% Similarity=0.616 Sum_probs=4.8
Q ss_pred EEEEccchhhhhh
Q 031491 101 ITVVGASGDLAKK 113 (158)
Q Consensus 101 ~VIFGATGDLAkR 113 (158)
=-|.|||||.|.-
T Consensus 36 Cp~CgAtGd~AHT 48 (55)
T PF05741_consen 36 CPICGATGDNAHT 48 (55)
T ss_dssp -TTT---GGG---
T ss_pred CCCCcCcCccccc
Confidence 3468999999864
No 134
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=22.11 E-value=1e+02 Score=25.19 Aligned_cols=35 Identities=29% Similarity=0.280 Sum_probs=23.6
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKL 142 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~ 142 (158)
-.++|.||||=++.... . .|... +..|+++.|...
T Consensus 5 ~~ilVtGatGfIG~~l~-~---~L~~~-----g~~V~~~~r~~~ 39 (322)
T PLN02662 5 KVVCVTGASGYIASWLV-K---LLLQR-----GYTVKATVRDPN 39 (322)
T ss_pred CEEEEECChHHHHHHHH-H---HHHHC-----CCEEEEEEcCCC
Confidence 36899999999997642 2 23333 357788887654
No 135
>PRK12827 short chain dehydrogenase; Provisional
Probab=22.01 E-value=1e+02 Score=23.76 Aligned_cols=14 Identities=29% Similarity=0.612 Sum_probs=12.0
Q ss_pred eEEEEEccchhhhh
Q 031491 99 LSITVVGASGDLAK 112 (158)
Q Consensus 99 ~s~VIFGATGDLAk 112 (158)
-.++|.||+|-|+.
T Consensus 7 ~~ilItGasg~iG~ 20 (249)
T PRK12827 7 RRVLITGGSGGLGR 20 (249)
T ss_pred CEEEEECCCChHHH
Confidence 46899999999985
No 136
>PRK07806 short chain dehydrogenase; Provisional
Probab=21.89 E-value=64 Score=25.22 Aligned_cols=34 Identities=21% Similarity=0.108 Sum_probs=23.0
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-.++|.||+|-+++... .. |...| ..|++++|+.
T Consensus 7 k~vlItGasggiG~~l~-~~---l~~~G-----~~V~~~~r~~ 40 (248)
T PRK07806 7 KTALVTGSSRGIGADTA-KI---LAGAG-----AHVVVNYRQK 40 (248)
T ss_pred cEEEEECCCCcHHHHHH-HH---HHHCC-----CEEEEEeCCc
Confidence 46899999999987653 22 33334 4677777764
No 137
>PRK05854 short chain dehydrogenase; Provisional
Probab=21.88 E-value=93 Score=26.10 Aligned_cols=44 Identities=23% Similarity=0.091 Sum_probs=27.8
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||+|=+++--. ..|.+. +.+|+.++|+.-..++..+.+
T Consensus 15 k~~lITGas~GIG~~~a----~~La~~-----G~~Vil~~R~~~~~~~~~~~l 58 (313)
T PRK05854 15 KRAVVTGASDGLGLGLA----RRLAAA-----GAEVILPVRNRAKGEAAVAAI 58 (313)
T ss_pred CEEEEeCCCChHHHHHH----HHHHHC-----CCEEEEEeCCHHHHHHHHHHH
Confidence 47899999998876432 233344 467888888754444444444
No 138
>TIGR02661 MauD methylamine dehydrogenase accessory protein MauD. This protein, MauD, appears critical to proper formation of the small subunit of methylamine dehydrogenase, which has both an unusual tryptophan tryptophylquinone cofactor and multiple disulfide bonds. MauD shares sequence similarity, including a CPxC motif, with a number of thiol:disulfide interchange proteins. In MauD mutants, the small subunit apparently does not form properly and is rapidly degraded.
Probab=21.57 E-value=4.1e+02 Score=20.89 Aligned_cols=50 Identities=16% Similarity=0.202 Sum_probs=37.3
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHh
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISK 153 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~ 153 (158)
...+|.|-|+.==.-++.+|.+-.++++. ++.|++++.. +.++..+++.+
T Consensus 75 k~vvl~F~atwCp~C~~~lp~l~~~~~~~----~~~vv~Is~~--~~~~~~~~~~~ 124 (189)
T TIGR02661 75 RPTLLMFTAPSCPVCDKLFPIIKSIARAE----ETDVVMISDG--TPAEHRRFLKD 124 (189)
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHhc----CCcEEEEeCC--CHHHHHHHHHh
Confidence 45788888888888899999999988652 5778888743 45666666654
No 139
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=21.41 E-value=66 Score=26.78 Aligned_cols=42 Identities=19% Similarity=0.132 Sum_probs=25.1
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRN 149 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~ 149 (158)
-.++|.||+|-++..-. -.|.+.| ..|+.++|+.-..++..+
T Consensus 7 k~vlVTGas~gIG~~~a----~~L~~~G-----~~V~~~~r~~~~~~~~~~ 48 (322)
T PRK07453 7 GTVIITGASSGVGLYAA----KALAKRG-----WHVIMACRNLKKAEAAAQ 48 (322)
T ss_pred CEEEEEcCCChHHHHHH----HHHHHCC-----CEEEEEECCHHHHHHHHH
Confidence 36899999998886432 2233334 567777776533333333
No 140
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=21.36 E-value=86 Score=24.80 Aligned_cols=42 Identities=10% Similarity=0.044 Sum_probs=25.3
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHH
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELR 148 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr 148 (158)
.-.++|.||+|-++..-. -.|...| .+|+.++|+....+++.
T Consensus 11 ~k~vlVtG~s~gIG~~la----~~l~~~G-----~~vv~~~r~~~~~~~~~ 52 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIA----ITFATAG-----ASVVVSDINADAANHVV 52 (255)
T ss_pred CCEEEEECCCchHHHHHH----HHHHHCC-----CeEEEEeCCHHHHHHHH
Confidence 357999999999987633 1233333 45666776544333333
No 141
>PLN02214 cinnamoyl-CoA reductase
Probab=21.34 E-value=68 Score=27.27 Aligned_cols=33 Identities=30% Similarity=0.388 Sum_probs=22.7
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
.++|.||+|-++...+- .|...| ..|+++.|..
T Consensus 12 ~vlVTGatGfIG~~l~~----~L~~~G-----~~V~~~~r~~ 44 (342)
T PLN02214 12 TVCVTGAGGYIASWIVK----ILLERG-----YTVKGTVRNP 44 (342)
T ss_pred EEEEECCCcHHHHHHHH----HHHHCc-----CEEEEEeCCc
Confidence 68999999999876542 233333 5677777754
No 142
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=21.27 E-value=2.4e+02 Score=25.90 Aligned_cols=45 Identities=20% Similarity=0.374 Sum_probs=29.7
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHH
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIS 152 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~ 152 (158)
.++|+|+||=.+..-| -.+ ...|++|.|+|++-. -..+.+.+.++
T Consensus 3 ~VaILGsTGSIG~~tL-~vi------~~~p~~f~VvaLaa~-~n~~~l~~q~~ 47 (385)
T PRK05447 3 RITILGSTGSIGTQTL-DVI------RRNPDRFRVVALSAG-KNVELLAEQAR 47 (385)
T ss_pred eEEEEcCChHHHHHHH-HHH------HhCccccEEEEEEcC-CCHHHHHHHHH
Confidence 5899999999988744 332 235778999999842 23444444444
No 143
>PLN02583 cinnamoyl-CoA reductase
Probab=21.05 E-value=69 Score=26.52 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=22.0
Q ss_pred EEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCC
Q 031491 100 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYART 140 (158)
Q Consensus 100 s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~ 140 (158)
.++|.||||-++..-. .. |.++ +..|+++.|+
T Consensus 8 ~vlVTGatG~IG~~lv-~~---Ll~~-----G~~V~~~~R~ 39 (297)
T PLN02583 8 SVCVMDASGYVGFWLV-KR---LLSR-----GYTVHAAVQK 39 (297)
T ss_pred EEEEECCCCHHHHHHH-HH---HHhC-----CCEEEEEEcC
Confidence 6899999999887644 22 2233 3577777774
No 144
>PRK06523 short chain dehydrogenase; Provisional
Probab=21.02 E-value=91 Score=24.62 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=21.1
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYART 140 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~ 140 (158)
-.++|.||+|.++..-. -. |.+.| .+|++++|+
T Consensus 10 k~vlItGas~gIG~~ia-~~---l~~~G-----~~v~~~~r~ 42 (260)
T PRK06523 10 KRALVTGGTKGIGAATV-AR---LLEAG-----ARVVTTARS 42 (260)
T ss_pred CEEEEECCCCchhHHHH-HH---HHHCC-----CEEEEEeCC
Confidence 47899999999986432 22 22333 466767664
No 145
>PF09861 DUF2088: Domain of unknown function (DUF2088); InterPro: IPR018657 This domain, found in various hypothetical proteins, has no known function. ; PDB: 2YJG_B.
Probab=20.69 E-value=2.9e+02 Score=22.74 Aligned_cols=57 Identities=25% Similarity=0.383 Sum_probs=31.1
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHc-CCCCCCcEEE-EEeC-CCCChHHHHHHHHhh
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYE-DCLPEDFTVF-GYAR-TKLTDEELRNVISKM 154 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~-g~Lp~~~~II-G~aR-~~~t~eefr~~v~~~ 154 (158)
...|||-=+|=---.+.++|.|+...++ |.-++++.|| +.+- +.+|.+|+++++-+.
T Consensus 56 ~V~Ivv~D~TRp~p~~~il~~ll~~L~~~Gv~~~~i~ii~A~G~Hr~~t~ee~~~~lG~~ 115 (204)
T PF09861_consen 56 RVAIVVDDITRPTPSDLILPALLEELEEAGVKDEDITIIIALGTHRPMTEEELKQILGEE 115 (204)
T ss_dssp EEEEEEE-TTS---HHHHHHHHHHHHHT-T-TT-EEEEEEE-TTS----HHHHHHHH-HH
T ss_pred eEEEEeCCCCCCCCHHHHHHHHHHHHHhcCCCccCEEEEEeCCCCCCCCHHHHHHHhhhh
Confidence 3445543344445568999999998877 5555566555 6665 789999999887643
No 146
>COG1564 THI80 Thiamine pyrophosphokinase [Coenzyme metabolism]
Probab=20.69 E-value=1.5e+02 Score=24.94 Aligned_cols=39 Identities=21% Similarity=0.274 Sum_probs=27.0
Q ss_pred CeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeC
Q 031491 98 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYAR 139 (158)
Q Consensus 98 ~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR 139 (158)
+.+|+|+||+|. .-=..+=.|+.|++. .+..+.|.=+.+
T Consensus 92 ~d~i~i~Ga~GG-R~DH~l~nl~ll~~~--~~~~~~i~l~~~ 130 (212)
T COG1564 92 ADEIVILGALGG-RLDHALANLFLLLRP--AKSGFKITLISG 130 (212)
T ss_pred CCEEEEEecCCC-hHHHHHHHHHHHHhh--hhccceEEEecC
Confidence 468999999999 666677777777766 444555544433
No 147
>PLN02780 ketoreductase/ oxidoreductase
Probab=20.45 E-value=77 Score=26.99 Aligned_cols=44 Identities=18% Similarity=0.173 Sum_probs=26.9
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||||-+++-.. ..|.+.| .+|+.++|++-..++..+.+
T Consensus 54 ~~~lITGAs~GIG~alA----~~La~~G-----~~Vil~~R~~~~l~~~~~~l 97 (320)
T PLN02780 54 SWALVTGPTDGIGKGFA----FQLARKG-----LNLVLVARNPDKLKDVSDSI 97 (320)
T ss_pred CEEEEeCCCcHHHHHHH----HHHHHCC-----CCEEEEECCHHHHHHHHHHH
Confidence 36899999998876532 2233334 56787888764444444443
No 148
>PRK06139 short chain dehydrogenase; Provisional
Probab=20.40 E-value=92 Score=26.75 Aligned_cols=44 Identities=14% Similarity=0.094 Sum_probs=26.4
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHH
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVI 151 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v 151 (158)
-.++|.||+|-+++--. ..|.+. +.+|+.++|++-..++..+.+
T Consensus 8 k~vlITGAs~GIG~aia----~~la~~-----G~~Vvl~~R~~~~l~~~~~~~ 51 (330)
T PRK06139 8 AVVVITGASSGIGQATA----EAFARR-----GARLVLAARDEEALQAVAEEC 51 (330)
T ss_pred CEEEEcCCCCHHHHHHH----HHHHHC-----CCEEEEEECCHHHHHHHHHHH
Confidence 47899999998886532 122233 356777888654334444433
No 149
>PLN02427 UDP-apiose/xylose synthase
Probab=20.35 E-value=1.1e+02 Score=26.22 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=24.0
Q ss_pred CCCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCC
Q 031491 96 GSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYART 140 (158)
Q Consensus 96 ~~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~ 140 (158)
..+..++|.||||=++...+ .. |...| +..|+++.|.
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv-~~---L~~~~----g~~V~~l~r~ 48 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLC-EK---LMTET----PHKVLALDVY 48 (386)
T ss_pred ccCcEEEEECCcchHHHHHH-HH---HHhcC----CCEEEEEecC
Confidence 34567999999999987544 32 33332 2467777764
No 150
>cd06167 LabA_like LabA_like proteins. A well conserved group of bacterial proteins with no defined function. LabA, a member from Synechococcus elongatus PCC 7942, has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system. In particular, LabA seems necessary for KaiC-dependent repression of gene expression.
Probab=20.22 E-value=2.6e+02 Score=20.46 Aligned_cols=46 Identities=22% Similarity=0.165 Sum_probs=33.7
Q ss_pred CCeEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHH
Q 031491 97 STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIS 152 (158)
Q Consensus 97 ~~~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~ 152 (158)
..-.+||+.+-||++ |++-.|-..| .+|+.++.......++++.+.
T Consensus 99 ~~d~ivLvSgD~Df~-----~~i~~lr~~G-----~~V~v~~~~~~~s~~L~~~~d 144 (149)
T cd06167 99 RIDTIVLVSGDSDFV-----PLVERLRELG-----KRVIVVGFEAKTSRELRKAAD 144 (149)
T ss_pred CCCEEEEEECCccHH-----HHHHHHHHcC-----CEEEEEccCccChHHHHHhCC
Confidence 345788888888875 9999998886 566667666666677776543
No 151
>PLN02253 xanthoxin dehydrogenase
Probab=20.17 E-value=79 Score=25.41 Aligned_cols=34 Identities=9% Similarity=0.002 Sum_probs=21.7
Q ss_pred eEEEEEccchhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCC
Q 031491 99 LSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTK 141 (158)
Q Consensus 99 ~s~VIFGATGDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~ 141 (158)
-.++|.||+|.++.--. -. |.+.| .+|+.++|++
T Consensus 19 k~~lItGas~gIG~~la-~~---l~~~G-----~~v~~~~~~~ 52 (280)
T PLN02253 19 KVALVTGGATGIGESIV-RL---FHKHG-----AKVCIVDLQD 52 (280)
T ss_pred CEEEEECCCchHHHHHH-HH---HHHcC-----CEEEEEeCCH
Confidence 46899999999985422 22 22333 5677777754
No 152
>PRK09437 bcp thioredoxin-dependent thiol peroxidase; Reviewed
Probab=20.12 E-value=3.4e+02 Score=19.94 Aligned_cols=52 Identities=13% Similarity=-0.045 Sum_probs=33.7
Q ss_pred eEEEEEccc-hhhhhhhhHHHHHHhHHcCCCCCCcEEEEEeCCCCChHHHHHHHHh
Q 031491 99 LSITVVGAS-GDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVISK 153 (158)
Q Consensus 99 ~s~VIFGAT-GDLAkRKL~PALf~L~~~g~Lp~~~~IIG~aR~~~t~eefr~~v~~ 153 (158)
..+|.|.++ ..-.-+..+|.|..++.+-. .+++.||++... +.++..+++.+
T Consensus 32 ~~ll~f~~~~~~p~C~~~~~~l~~~~~~~~-~~~v~vi~Is~d--~~~~~~~~~~~ 84 (154)
T PRK09437 32 RVLVYFYPKAMTPGCTVQACGLRDNMDELK-KAGVVVLGISTD--KPEKLSRFAEK 84 (154)
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHH-HCCCEEEEEcCC--CHHHHHHHHHH
Confidence 466666655 33335567788888876521 346999999864 45777766644
No 153
>cd06270 PBP1_GalS_like Ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Transcription of the galactose regulon genes is regulated by Gal iso-repressor (GalS) and Gal repressor (GalR) in different ways, but both repressors recognize the same DNA binding site in the absence of D-galactose. GalS is a dimeric protein like GalR,and its major role is in regulating expression of the high-affinity galactose transporter encoded by the mgl operon, whereas GalR is the exclusive regulator of galactose permease, the low-affinity galactose transporter. GalS and GalR are members of the LacI-GalR family of transcription regulators and both contain the type I periplasmic binding protein-like fold. Hence, they are homologous to the periplasmic sugar bindi
Probab=20.06 E-value=1.7e+02 Score=22.87 Aligned_cols=37 Identities=27% Similarity=0.452 Sum_probs=25.2
Q ss_pred EEEccchhhhhhhhHHHHHHhHHcCC-CCCCcEEEEEeCCCC
Q 031491 102 TVVGASGDLAKKKIFPALFALYYEDC-LPEDFTVFGYARTKL 142 (158)
Q Consensus 102 VIFGATGDLAkRKL~PALf~L~~~g~-Lp~~~~IIG~aR~~~ 142 (158)
.||+.++.+|.. ++..|...|. +|+++.|+|++..++
T Consensus 180 ai~~~~d~~a~g----~~~~l~~~g~~ip~di~v~g~d~~~~ 217 (268)
T cd06270 180 AVFCANDEMAAG----AISALREHGISVPQDVSIIGFDDVLL 217 (268)
T ss_pred EEEEcCcHHHHH----HHHHHHHcCCCCCCceeEEEecCchH
Confidence 667777776643 3344445564 799999999987654
Done!