BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031493
MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGST
AIEIALKMAFRKFSFDHDVLVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQG
FCSNHGTLEEAFFWTLLQFSCTTANGFFPYLNCCIPKL

High Scoring Gene Products

Symbol, full name Information P value
BIO1
AT5G57590
protein from Arabidopsis thaliana 6.5e-31
ECH_0666
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
protein from Ehrlichia chaffeensis str. Arkansas 0.00022

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031493
        (158 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2174532 - symbol:BIO1 "AT5G57590" species:3702...   350  6.5e-31   1
ASPGD|ASPL0000002022 - symbol:biA species:162425 "Emerice...   166  3.2e-11   1
TIGR_CMR|ECH_0666 - symbol:ECH_0666 "adenosylmethionine-8...   105  0.00022   2


>TAIR|locus:2174532 [details] [associations]
            symbol:BIO1 "AT5G57590" species:3702 "Arabidopsis
            thaliana" [GO:0004015 "adenosylmethionine-8-amino-7-oxononanoate
            transaminase activity" evidence=IGI;IDA] [GO:0004141 "dethiobiotin
            synthase activity" evidence=IDA] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0009102 "biotin biosynthetic process"
            evidence=IGI;IDA] [GO:0006260 "DNA replication" evidence=RCA]
            [GO:0006270 "DNA replication initiation" evidence=RCA] [GO:0006275
            "regulation of DNA replication" evidence=RCA] [GO:0006306 "DNA
            methylation" evidence=RCA] [GO:0008283 "cell proliferation"
            evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
            [GO:0051726 "regulation of cell cycle" evidence=RCA]
            InterPro:IPR004472 InterPro:IPR005814 InterPro:IPR015421
            InterPro:IPR015422 Pfam:PF00202 PROSITE:PS00600 UniPathway:UPA00078
            GO:GO:0005739 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
            InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0000287 PANTHER:PTHR11986
            GO:GO:0009102 KO:K00833 GO:GO:0004015 eggNOG:COG0132 GO:GO:0004141
            EMBL:EU089963 EMBL:EU090805 EMBL:EF081156 EMBL:HQ857557
            EMBL:HQ857558 EMBL:AB011482 EMBL:BT010433 EMBL:AK175602
            IPI:IPI00526859 RefSeq:NP_200567.2 UniGene:At.29327 PDB:4A0F
            PDB:4A0G PDB:4A0H PDB:4A0R PDBsum:4A0F PDBsum:4A0G PDBsum:4A0H
            PDBsum:4A0R ProteinModelPortal:B0F481 SMR:B0F481 STRING:B0F481
            PaxDb:B0F481 PRIDE:B0F481 EnsemblPlants:AT5G57590.1 GeneID:835863
            KEGG:ath:AT5G57590 TAIR:At5g57590 HOGENOM:HOG000201750
            InParanoid:B0F481 OMA:YGHVMFP PhylomeDB:B0F481 ProtClustDB:PLN02974
            BioCyc:MetaCyc:MONOMER-8566 Genevestigator:B0F481 Uniprot:B0F481
        Length = 833

 Score = 350 (128.3 bits), Expect = 6.5e-31, P = 6.5e-31
 Identities = 66/74 (89%), Positives = 69/74 (93%)

Query:     5 FQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEI 64
             FQ ELAR+MGYTAARFGHVMFPENVYEPAL+CAELLL GVGKGWASR YFSDNGSTAIEI
Sbjct:   400 FQAELAREMGYTAARFGHVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEI 459

Query:    65 ALKMAFRKFSFDHD 78
             ALKMAFRKF  DH+
Sbjct:   460 ALKMAFRKFCVDHN 473


>ASPGD|ASPL0000002022 [details] [associations]
            symbol:biA species:162425 "Emericella nidulans"
            [GO:0009102 "biotin biosynthetic process" evidence=IMP] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008483 "transaminase
            activity" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
            evidence=IEA] HAMAP:MF_00336 InterPro:IPR004472 InterPro:IPR005814
            InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00202 PROSITE:PS00600
            GO:GO:0005524 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
            InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008483 GO:GO:0000287
            EMBL:BN001301 PANTHER:PTHR11986 EMBL:AACD01000110 GO:GO:0009102
            KO:K00833 OrthoDB:EOG4FV07R eggNOG:COG0132 GO:GO:0004141
            HOGENOM:HOG000201750 OMA:YGHVMFP RefSeq:XP_664248.1
            ProteinModelPortal:Q5AYI6 EnsemblFungi:CADANIAT00007426
            GeneID:2870397 KEGG:ani:AN6644.2 Uniprot:Q5AYI6
        Length = 787

 Score = 166 (63.5 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 32/63 (50%), Positives = 42/63 (66%)

Query:     9 LARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68
             LA    Y A R+GHVMFP N++EPAL  AE LL+ V      + +++DNGST +E+ALKM
Sbjct:   335 LALSAAYAAGRYGHVMFPGNIHEPALALAESLLKTVDNPRLQKVFYTDNGSTGMEVALKM 394

Query:    69 AFR 71
               R
Sbjct:   395 GLR 397


>TIGR_CMR|ECH_0666 [details] [associations]
            symbol:ECH_0666 "adenosylmethionine-8-amino-7-oxononanoate
            aminotransferase" species:205920 "Ehrlichia chaffeensis str.
            Arkansas" [GO:0004015 "adenosylmethionine-8-amino-7-oxononanoate
            transaminase activity" evidence=ISS] [GO:0009102 "biotin
            biosynthetic process" evidence=ISS] InterPro:IPR005814
            InterPro:IPR005815 InterPro:IPR015421 InterPro:IPR015422
            Pfam:PF00202 PROSITE:PS00600 GO:GO:0030170 Gene3D:3.40.640.10
            Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
            EMBL:CP000236 GenomeReviews:CP000236_GR PANTHER:PTHR11986
            GO:GO:0009102 eggNOG:COG0161 HOGENOM:HOG000020209 KO:K00833
            GO:GO:0004015 PANTHER:PTHR11986:SF8 TIGRFAMs:TIGR00508
            RefSeq:YP_507474.1 ProteinModelPortal:Q2GGF9 STRING:Q2GGF9
            GeneID:3928007 KEGG:ech:ECH_0666 PATRIC:20576786 OMA:SASGCYI
            ProtClustDB:CLSK749366 BioCyc:ECHA205920:GJNR-668-MONOMER
            Uniprot:Q2GGF9
        Length = 426

 Score = 105 (42.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 23/56 (41%), Positives = 35/56 (62%)

Query:    18 ARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKF 73
             A+  HVMF    +E +   A  L++   K   SR +FSD+GSTA+E+A+KMA + +
Sbjct:    76 AKLSHVMFSGLAHEQSYVLASRLVKISPKQKMSRVFFSDSGSTAVEVAMKMAVQYY 131

 Score = 35 (17.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query:   117 LTQGFCSNHGTL--EEAF 132
             LT GFC+   TL  EE +
Sbjct:   274 LTGGFCTLAATLTTEEVY 291


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.141   0.476    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      158       158   0.00085  106 3  11 22  0.41    31
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  180 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.36u 0.11s 14.47t   Elapsed:  00:00:01
  Total cpu time:  14.36u 0.11s 14.47t   Elapsed:  00:00:01
  Start:  Sat May 11 04:13:44 2013   End:  Sat May 11 04:13:45 2013

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