BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031493
(158 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ZKV8|BIODA_ORYSJ Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid
aminotransferase, mitochondrial OS=Oryza sativa subsp.
japonica GN=BIO3-BIO1 PE=2 SV=1
Length = 821
Score = 144 bits (363), Expect = 2e-34, Method: Composition-based stats.
Identities = 68/94 (72%), Positives = 75/94 (79%)
Query: 5 FQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEI 64
QIELARDMGY AAR+GHVMFPENV+EPAL CAELLL GVGK WASR YFSDNGSTAIEI
Sbjct: 383 LQIELARDMGYAAARYGHVMFPENVHEPALRCAELLLGGVGKDWASRVYFSDNGSTAIEI 442
Query: 65 ALKMAFRKFSFDHDVLVDFLGKDTTEKCVELKHL 98
ALKMAFRK++ DH ++VD +E V K L
Sbjct: 443 ALKMAFRKYACDHGIIVDSEKDIRSEGSVHFKVL 476
>sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid
aminotransferase, mitochondrial OS=Arabidopsis thaliana
GN=BIO3-BIO1 PE=1 SV=1
Length = 833
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/74 (89%), Positives = 69/74 (93%)
Query: 5 FQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEI 64
FQ ELAR+MGYTAARFGHVMFPENVYEPAL+CAELLL GVGKGWASR YFSDNGSTAIEI
Sbjct: 400 FQAELAREMGYTAARFGHVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEI 459
Query: 65 ALKMAFRKFSFDHD 78
ALKMAFRKF DH+
Sbjct: 460 ALKMAFRKFCVDHN 473
>sp|P44426|BIOA_HAEIN Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=bioA PE=3 SV=1
Length = 430
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 18 ARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
A+ H+MF ++PA+E A+LL+Q + G + +F+D+GS A+E+A+KMA +
Sbjct: 75 AKMSHIMFGGFTHDPAVELAQLLVQILPNGL-DKIFFADSGSVAVEVAMKMAIQ 127
>sp|Q64VX4|BIOAB_BACFR Biotin biosynthesis bifunctional protein BioAB OS=Bacteroides
fragilis (strain YCH46) GN=bioB PE=3 SV=1
Length = 748
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 18 ARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
+R HVMF ++PA+E +LLL V + +++D+GS A+E+ALKMA +
Sbjct: 389 SRMSHVMFGGLTHDPAIELGKLLLPLVPPSM-QKIFYADSGSVAVEVALKMAVQ 441
>sp|Q5LEY1|BIOAB_BACFN Biotin biosynthesis bifunctional protein BioAB OS=Bacteroides
fragilis (strain ATCC 25285 / NCTC 9343) GN=bioB PE=3
SV=1
Length = 748
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 18 ARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
+R HVMF ++PA+E +LLL V + +++D+GS A+E+ALKMA +
Sbjct: 389 SRMSHVMFGGLTHDPAIELGKLLLPLVPPSM-QKIFYADSGSVAVEVALKMAVQ 441
>sp|E1WTS4|BIOAB_BACF6 Biotin biosynthesis bifunctional protein BioAB OS=Bacteroides
fragilis (strain 638R) GN=bioB PE=3 SV=1
Length = 748
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 18 ARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
+R HVMF ++PA+E +LLL V + +++D+GS A+E+ALKMA +
Sbjct: 389 SRMSHVMFGGLTHDPAIELGKLLLPLVPPSM-QKIFYADSGSVAVEVALKMAVQ 441
>sp|E6SRG2|BIOAB_BACT6 Biotin biosynthesis bifunctional protein BioAB OS=Bacteroides
helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P
36-108) GN=bioB PE=3 SV=1
Length = 744
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 18 ARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
+ HVMF +EPA+E +LLL V + +++D+GS A+E+ALKMA +
Sbjct: 389 GKMSHVMFGGLTHEPAIELGKLLLPLVPPSM-QKIFYADSGSVAVEVALKMAVQ 441
>sp|P22805|BIOA_LYSSH Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Lysinibacillus sphaericus GN=bioA PE=1 SV=1
Length = 455
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 9 LARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68
+++ + A H +F +EPA++ A+ L+ + + +F+DNGS+AIE+ALKM
Sbjct: 69 ISQALSEQAFTLEHTIFANFSHEPAIKLAQKLV-ALTPQSLQKVFFADNGSSAIEVALKM 127
Query: 69 AFR 71
+F+
Sbjct: 128 SFQ 130
>sp|Q8A7T2|BIOAB_BACTN Biotin biosynthesis bifunctional protein BioAB OS=Bacteroides
thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC
10582 / E50 / VPI-5482) GN=bioB PE=3 SV=2
Length = 741
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 19 RFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
+ HVMF ++PA+E +LLL V + +++D+GS A+E+ALKMA +
Sbjct: 390 KMSHVMFGGLTHDPAIELGKLLLPLVPPSM-QKIFYADSGSVAVEVALKMAVQ 441
>sp|P45488|BIOA_MYCLE Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Mycobacterium leprae (strain TN) GN=bioA PE=3 SV=1
Length = 436
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 22 HVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
HVMF +EPA A+LL+ G + +FSD+GS ++++A+KMA +
Sbjct: 91 HVMFGGLTHEPAARLAQLLVDITPAGLET-VFFSDSGSVSVQVAVKMALQ 139
>sp|P0A4X6|BIOA_MYCTU Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Mycobacterium tuberculosis GN=bioA PE=1 SV=1
Length = 437
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 22 HVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
HVMF +EPA A+LL+ G + +FSD+GS ++E+A KMA +
Sbjct: 89 HVMFGGLTHEPAARLAKLLVDITPAGLDT-VFFSDSGSVSVEVAAKMALQ 137
>sp|P0A4X7|BIOA_MYCBO Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=bioA PE=3 SV=1
Length = 437
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 22 HVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
HVMF +EPA A+LL+ G + +FSD+GS ++E+A KMA +
Sbjct: 89 HVMFGGLTHEPAARLAKLLVDITPAGLDT-VFFSDSGSVSVEVAAKMALQ 137
>sp|P46395|BIOA_CORGL Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM
20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=bioA PE=3
SV=2
Length = 423
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 20 FGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
HVMF +EPA++ LL G + ++SD+GS ++E+A+KMA +
Sbjct: 74 MSHVMFGGLTHEPAIKLTHKLLNLTGNSF-DHVFYSDSGSVSVEVAIKMALQ 124
>sp|P53555|BIOK_BACSU L-Lysine-8-amino-7-oxononanoate aminotransferase OS=Bacillus
subtilis (strain 168) GN=bioK PE=1 SV=1
Length = 448
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 32 PALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
PA + AE L+ + +R ++SD+G+ A+EIALKMAF+
Sbjct: 88 PATQLAETLID-ISPKKLTRVFYSDSGAEAMEIALKMAFQ 126
>sp|Q9FCC2|BIOA_STRCO Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=bioA PE=3 SV=1
Length = 428
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 19 RFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
R HVMF +EPA+ A+LL+ +G + +D+GS ++E+A+KM +
Sbjct: 81 RMSHVMFGGLTHEPAVRLAKLLVDMSPEGL-EHVFLADSGSVSVEVAVKMCLQ 132
>sp|Q89AK4|BIOA_BUCBP Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=bioA PE=3 SV=1
Length = 429
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 19 RFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
+ HVMF + PA+ + L++ + +R + SD+GS +IEIA+KM +
Sbjct: 74 KMSHVMFGGITHYPAISLCKKLIE-ITPNSLTRIFLSDSGSVSIEIAIKMILQ 125
>sp|Q2FVJ6|BIOA_STAA8 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Staphylococcus aureus (strain NCTC 8325) GN=bioA PE=3
SV=1
Length = 452
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 32 PALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
P++E AE L++ + + ++SD GS ++EIA+KMA++
Sbjct: 91 PSIELAEKLIE-ITPSNLRKVFYSDTGSASVEIAIKMAYQ 129
>sp|Q728P4|BIOA_DESVH Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB 8303) GN=bioA PE=3 SV=1
Length = 542
Score = 36.6 bits (83), Expect = 0.067, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 32 PALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
P++E A L + +R ++SD+GSTA+E ALK+AF+
Sbjct: 145 PSIELAARL-TAIAPAGLTRVFYSDSGSTAVEAALKIAFQ 183
>sp|P50277|BIOA_YEAST Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=BIO3 PE=1 SV=1
Length = 480
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 8 ELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67
EL + +F HV+ ++ A+ + LL+ + + + +D+GS A+E+ALK
Sbjct: 76 ELNEALTKQMLKFSHVLLGGFTHKGAVNLVQKLLKVIDEPSLQYCFLADSGSVAVEVALK 135
Query: 68 MAFR 71
MA +
Sbjct: 136 MALQ 139
>sp|P59320|ARGD_SHEON Acetylornithine aminotransferase OS=Shewanella oneidensis (strain
MR-1) GN=argD PE=3 SV=1
Length = 405
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Query: 31 EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR----KFSFDHDVLVDF 83
EPALE A L V +A R YF+++G+ A E ALK+A R K + D ++ F
Sbjct: 83 EPALELATKL---VNSTFAERVYFANSGAEANEAALKLARRYALEKHGVEKDEIIAF 136
>sp|Q9ZKM5|BIOA_HELPJ Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Helicobacter pylori (strain J99) GN=bioA PE=3 SV=1
Length = 439
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 9 LARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68
+++ + HV+ ++P + ++ L Q G + +++DNGS+ IEIALKM
Sbjct: 68 ISQQLKNQIDNLEHVLLASFSHKPIITLSQRLCQLTG---MDKCFYADNGSSCIEIALKM 124
Query: 69 AF 70
++
Sbjct: 125 SY 126
>sp|B7GHM5|BIOA_ANOFW Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1)
GN=bioA PE=3 SV=1
Length = 454
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 9/44 (20%)
Query: 32 PALECAELLLQGVGKGWA----SRAYFSDNGSTAIEIALKMAFR 71
PA+ AE L++ W +R ++SD+G+ A+EIALK+AF+
Sbjct: 94 PAIALAEKLIE-----WTPSHLTRVFYSDSGAEAVEIALKIAFQ 132
>sp|Q74CT9|BIOA_GEOSL Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM
12127 / PCA) GN=bioA PE=3 SV=1
Length = 453
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 19/21 (90%)
Query: 51 RAYFSDNGSTAIEIALKMAFR 71
+ ++SDNGSTA+E+ +KMAF+
Sbjct: 111 KVFYSDNGSTAVEVGVKMAFQ 131
>sp|P22256|GABT_ECOLI 4-aminobutyrate aminotransferase GabT OS=Escherichia coli (strain
K12) GN=gabT PE=1 SV=1
Length = 426
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 19 RFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69
+ H F YEP LE E++ Q V +A + GS A+E A+K+A
Sbjct: 72 KLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIA 122
>sp|P12995|BIOA_ECOLI Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Escherichia coli (strain K12) GN=bioA PE=1 SV=2
Length = 429
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 20 FGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDV 79
HVMF + PA+E L+ + + +D+GS A+E+A+KMA + + +
Sbjct: 75 MSHVMFGGITHAPAIELCRKLVAMTPQPLEC-VFLADSGSVAVEVAMKMALQYWQAKGEA 133
Query: 80 LVDFL 84
FL
Sbjct: 134 RQRFL 138
>sp|P57600|ARGD_BUCAI Acetylornithine/succinyldiaminopimelate aminotransferase
OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
(strain APS) GN=argD PE=3 SV=1
Length = 408
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 31 EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA----FRKFSFDHDVLVDF 83
EPAL A+ LL +ASR +F+++G+ A E A K+A + ++F + ++ F
Sbjct: 84 EPALRLAKKLLSS---SFASRIFFANSGAEANEAAFKLARYYSSKIYNFKKNKIISF 137
>sp|Q9JTX9|ARGD_NEIMA Acetylornithine aminotransferase OS=Neisseria meningitidis
serogroup A / serotype 4A (strain Z2491) GN=argD PE=3
SV=1
Length = 397
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 27 ENVY--EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDH 77
N+Y PA E A+ L V +A + +F ++GS A E ALK+A RK++ D
Sbjct: 66 SNIYTTRPAQELAQKL---VANSFADKVFFCNSGSEANEAALKLA-RKYARDR 114
>sp|Q9JYY4|ARGD_NEIMB Acetylornithine aminotransferase OS=Neisseria meningitidis
serogroup B (strain MC58) GN=argD PE=3 SV=1
Length = 398
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 27 ENVY--EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDH 77
N+Y PA E A+ L V +A + +F ++GS A E ALK+A RK++ D
Sbjct: 66 SNIYTTRPAQELAQKL---VANSFADKVFFCNSGSEANEAALKLA-RKYARDR 114
>sp|O25627|BIOA_HELPY Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Helicobacter pylori (strain ATCC 700392 / 26695)
GN=bioA PE=3 SV=1
Length = 436
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 22 HVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70
HV+ ++P + ++ L Q + +++DNGS+ +EIALKM++
Sbjct: 81 HVLLASFSHKPIITLSQRLCQLT---HMDKCFYADNGSSCVEIALKMSY 126
>sp|P57379|BIOA_BUCAI Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
(strain APS) GN=bioA PE=3 SV=1
Length = 428
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 9 LARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68
L + + + HVMF + PA+ L+ + + SD+GS AIE+A+KM
Sbjct: 64 LNKALKKQIRKMSHVMFGGITHPPAISLCRKLISLTPEKLDC-VFLSDSGSVAIEVAIKM 122
Query: 69 AFR 71
+
Sbjct: 123 LIQ 125
>sp|Q7N2G7|ASTC_PHOLL Succinylornithine transaminase OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=astC PE=3 SV=1
Length = 402
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Query: 31 EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFD 76
EP L+ A+ L++ +A +A+F ++G+ A E ALK+A RK++ D
Sbjct: 81 EPVLKLAKRLVENT---FADKAFFCNSGAEANEAALKLA-RKYAAD 122
>sp|P59086|ARGD_BUCAP Acetylornithine/succinyldiaminopimelate aminotransferase
OS=Buchnera aphidicola subsp. Schizaphis graminum
(strain Sg) GN=argD PE=3 SV=1
Length = 404
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 31 EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69
EPAL A+ L + +ASR +F+++G+ A E A K+A
Sbjct: 84 EPALRLADKL---ISSSFASRVFFANSGAEANEAAFKLA 119
>sp|P59315|ARGD_BIFLO Acetylornithine aminotransferase OS=Bifidobacterium longum (strain
NCC 2705) GN=argD PE=3 SV=1
Length = 431
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 31 EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69
EP +E A L++ G S+ YF ++G+ E ALK+A
Sbjct: 91 EPQIELASKLVKLAGAPEGSKVYFGNSGAEGNEAALKLA 129
>sp|O66557|BIOA_AQUAE Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Aquifex aeolicus (strain VF5) GN=bioA PE=3 SV=1
Length = 453
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 32 PALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70
PA+ A+ L++ +G ++ ++S++G+ A+EIA+KMA+
Sbjct: 93 PAILLAKKLVEISPEGL-NKVFYSEDGAEAVEIAIKMAY 130
>sp|P12677|BIOA_SALTY Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=bioA PE=3 SV=2
Length = 429
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 20 FGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71
HVMF ++PA+ L+ + + +D+GS ++E+A+KMA +
Sbjct: 75 MSHVMFGGITHQPAVNLCRKLV-AITPEPLECVFLADSGSVSVEVAMKMALQ 125
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.141 0.476
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,539,676
Number of Sequences: 539616
Number of extensions: 2350965
Number of successful extensions: 5729
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 5704
Number of HSP's gapped (non-prelim): 35
length of query: 158
length of database: 191,569,459
effective HSP length: 108
effective length of query: 50
effective length of database: 133,290,931
effective search space: 6664546550
effective search space used: 6664546550
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 56 (26.2 bits)