Query 031493
Match_columns 158
No_of_seqs 154 out of 1503
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 14:54:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031493.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031493hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4992 ArgD Ornithine/acetylo 100.0 4.7E-28 1E-32 210.2 11.0 116 2-146 56-173 (404)
2 COG0161 BioA Adenosylmethionin 99.9 1E-26 2.2E-31 204.8 10.5 125 1-149 57-185 (449)
3 COG0160 GabT 4-aminobutyrate a 99.9 6.4E-25 1.4E-29 193.7 10.7 98 2-128 70-167 (447)
4 KOG1404 Alanine-glyoxylate ami 99.9 5.5E-24 1.2E-28 183.8 9.7 105 2-137 64-168 (442)
5 PRK07482 hypothetical protein; 99.9 1.3E-23 2.8E-28 185.8 11.3 103 1-127 63-166 (461)
6 PRK07483 hypothetical protein; 99.9 4.5E-23 9.7E-28 181.5 11.6 103 1-127 43-145 (443)
7 PRK13360 omega amino acid--pyr 99.9 4.6E-23 9.9E-28 181.4 11.4 103 1-127 59-161 (442)
8 PRK05965 hypothetical protein; 99.9 3.7E-23 8E-28 182.7 10.7 103 1-127 59-162 (459)
9 PRK06916 adenosylmethionine--8 99.9 6.4E-23 1.4E-27 181.3 11.7 103 1-127 69-171 (460)
10 PRK08742 adenosylmethionine--8 99.9 6.4E-23 1.4E-27 182.1 11.7 104 1-127 77-184 (472)
11 PRK06173 adenosylmethionine--8 99.9 6.3E-23 1.4E-27 180.0 11.5 102 1-126 57-158 (429)
12 PRK05630 adenosylmethionine--8 99.9 8.1E-23 1.7E-27 178.9 11.6 102 1-126 53-154 (422)
13 PRK06943 adenosylmethionine--8 99.9 8.7E-23 1.9E-27 180.2 11.7 103 1-127 67-169 (453)
14 PRK07030 adenosylmethionine--8 99.9 8.6E-23 1.9E-27 180.9 11.4 103 1-127 60-162 (466)
15 PLN02974 adenosylmethionine-8- 99.9 6.6E-23 1.4E-27 192.0 11.1 113 2-126 379-494 (817)
16 PRK06917 hypothetical protein; 99.9 1.1E-22 2.4E-27 179.2 11.4 103 1-127 44-146 (447)
17 TIGR03372 putres_am_tran putre 99.9 9.5E-23 2.1E-27 179.8 10.9 99 1-127 88-186 (442)
18 PRK06918 4-aminobutyrate amino 99.9 1.1E-22 2.4E-27 178.8 11.2 96 1-126 67-163 (451)
19 PRK05964 adenosylmethionine--8 99.9 1.4E-22 2.9E-27 176.5 11.3 103 1-127 55-157 (423)
20 PRK07986 adenosylmethionine--8 99.9 1.3E-22 2.8E-27 178.1 11.0 101 1-126 56-156 (428)
21 PRK06541 hypothetical protein; 99.9 1.9E-22 4E-27 178.4 11.7 103 1-127 65-167 (460)
22 PRK07481 hypothetical protein; 99.9 2.3E-22 5E-27 177.2 12.0 104 1-127 55-159 (449)
23 PRK09221 beta alanine--pyruvat 99.9 2.3E-22 4.9E-27 177.1 11.8 103 1-127 62-164 (445)
24 PRK05639 4-aminobutyrate amino 99.9 1.5E-22 3.3E-27 179.0 10.6 96 1-126 66-161 (457)
25 PRK07480 putative aminotransfe 99.9 2.8E-22 6.1E-27 177.1 11.6 103 1-127 63-166 (456)
26 PRK05769 4-aminobutyrate amino 99.9 2.2E-22 4.7E-27 177.0 10.7 97 1-126 67-163 (441)
27 PRK06062 hypothetical protein; 99.9 1.8E-22 3.8E-27 178.1 9.9 96 1-127 66-161 (451)
28 PRK06105 aminotransferase; Pro 99.9 3.7E-22 8E-27 176.4 11.9 102 1-126 61-163 (460)
29 KOG1401 Acetylornithine aminot 99.9 2.2E-22 4.8E-27 174.5 9.8 109 2-134 70-180 (433)
30 PRK11522 putrescine--2-oxoglut 99.9 3.7E-22 8E-27 176.7 11.5 99 1-127 95-193 (459)
31 TIGR00700 GABAtrnsam 4-aminobu 99.9 3.6E-22 7.8E-27 173.9 10.9 97 1-126 46-142 (420)
32 PRK07495 4-aminobutyrate amino 99.9 3.7E-22 7.9E-27 174.8 11.0 97 1-126 53-149 (425)
33 PRK08360 4-aminobutyrate amino 99.9 3.7E-22 8.1E-27 175.7 10.8 97 1-127 54-150 (443)
34 PRK07036 hypothetical protein; 99.9 7E-22 1.5E-26 175.0 11.6 103 1-127 64-167 (466)
35 PRK08297 L-lysine aminotransfe 99.9 7.8E-22 1.7E-26 173.7 10.5 105 1-126 58-170 (443)
36 PRK06777 4-aminobutyrate amino 99.9 1E-21 2.2E-26 171.5 11.1 97 1-126 53-149 (421)
37 PRK08593 4-aminobutyrate amino 99.9 1E-21 2.3E-26 172.9 11.1 97 1-126 55-151 (445)
38 PRK09792 4-aminobutyrate trans 99.9 1.4E-21 3E-26 170.6 11.4 97 1-126 53-149 (421)
39 PRK07678 aminotransferase; Val 99.9 1.6E-21 3.4E-26 172.0 11.6 101 1-127 60-160 (451)
40 PF00202 Aminotran_3: Aminotra 99.9 3E-22 6.6E-27 170.5 6.7 102 1-126 29-130 (339)
41 PRK04612 argD acetylornithine 99.9 1.5E-21 3.2E-26 170.3 10.6 102 1-127 53-154 (408)
42 PRK08117 4-aminobutyrate amino 99.9 3.7E-21 8E-26 168.0 11.2 96 1-126 56-151 (433)
43 PLN02760 4-aminobutyrate:pyruv 99.9 3.5E-21 7.5E-26 172.3 11.2 119 1-143 102-224 (504)
44 TIGR03251 LAT_fam L-lysine 6-t 99.9 3.3E-21 7.2E-26 168.9 10.8 106 1-127 51-164 (431)
45 PRK09264 diaminobutyrate--2-ox 99.9 3.7E-21 8E-26 168.1 10.8 96 1-126 52-151 (425)
46 PLN00144 acetylornithine trans 99.9 3.5E-21 7.5E-26 166.2 10.5 107 1-127 28-134 (382)
47 PRK06082 4-aminobutyrate amino 99.8 5.2E-21 1.1E-25 169.2 10.9 96 1-127 84-179 (459)
48 TIGR00709 dat 2,4-diaminobutyr 99.8 9.7E-21 2.1E-25 166.4 10.6 97 1-126 52-150 (442)
49 TIGR02407 ectoine_ectB diamino 99.8 8.4E-21 1.8E-25 165.3 10.1 96 1-126 48-147 (412)
50 TIGR00699 GABAtrns_euk 4-amino 99.8 6.6E-21 1.4E-25 169.2 9.5 113 1-127 71-198 (464)
51 PRK06938 diaminobutyrate--2-ox 99.8 1.1E-20 2.3E-25 167.5 10.7 96 1-126 76-175 (464)
52 PRK06058 4-aminobutyrate amino 99.8 1.2E-20 2.6E-25 165.7 10.8 97 1-126 69-165 (443)
53 PRK12403 putative aminotransfe 99.8 1.5E-20 3.3E-25 166.2 11.4 103 1-127 67-170 (460)
54 PRK12389 glutamate-1-semialdeh 99.8 9.5E-21 2E-25 165.7 9.8 92 1-126 66-157 (428)
55 PRK06931 diaminobutyrate--2-ox 99.8 1.8E-20 3.9E-25 165.7 10.7 98 1-127 71-170 (459)
56 PRK06148 hypothetical protein; 99.8 1.8E-20 3.9E-25 179.0 10.6 94 1-126 635-728 (1013)
57 PRK00615 glutamate-1-semialdeh 99.8 5.3E-20 1.1E-24 161.9 11.0 93 1-126 66-161 (433)
58 PRK04013 argD acetylornithine/ 99.8 8.2E-20 1.8E-24 157.6 11.5 93 1-126 37-129 (364)
59 TIGR00508 bioA adenosylmethion 99.8 8.9E-20 1.9E-24 159.8 10.4 102 1-126 58-159 (427)
60 PLN02624 ornithine-delta-amino 99.8 3.2E-19 7E-24 158.2 11.4 102 1-127 88-189 (474)
61 PRK12381 bifunctional succinyl 99.8 3.6E-19 7.8E-24 154.2 10.8 100 1-127 52-151 (406)
62 PRK07046 aminotransferase; Val 99.8 5.9E-19 1.3E-23 156.0 11.1 87 1-122 88-174 (453)
63 PRK06149 hypothetical protein; 99.8 3E-19 6.6E-24 170.0 9.8 94 1-126 596-689 (972)
64 PRK04073 rocD ornithine--oxo-a 99.8 7.8E-19 1.7E-23 151.2 10.8 101 1-126 53-153 (396)
65 PLN02482 glutamate-1-semialdeh 99.8 6.8E-19 1.5E-23 156.6 10.6 86 1-120 112-197 (474)
66 TIGR03246 arg_catab_astC succi 99.8 8.1E-19 1.7E-23 151.6 10.7 99 1-126 48-146 (397)
67 PRK03715 argD acetylornithine 99.8 1.9E-18 4.2E-23 149.9 10.8 99 1-127 49-147 (395)
68 PRK08088 4-aminobutyrate amino 99.7 8.1E-18 1.8E-22 146.7 10.5 97 1-126 54-150 (425)
69 COG0001 HemL Glutamate-1-semia 99.7 1.1E-17 2.4E-22 146.8 10.5 85 1-119 66-150 (432)
70 KOG1402 Ornithine aminotransfe 99.7 5.6E-18 1.2E-22 144.6 8.1 101 3-128 74-174 (427)
71 KOG1405 4-aminobutyrate aminot 99.7 2E-18 4.3E-23 148.5 4.9 127 2-141 90-235 (484)
72 PRK05093 argD bifunctional N-s 99.7 2.3E-17 5E-22 142.3 10.0 99 1-126 53-151 (403)
73 PRK00062 glutamate-1-semialdeh 99.7 1.9E-16 4E-21 138.4 11.6 90 1-124 63-152 (426)
74 PRK01278 argD acetylornithine 99.7 1.5E-16 3.3E-21 136.2 9.8 100 1-127 44-143 (389)
75 TIGR00713 hemL glutamate-1-sem 99.7 2.2E-16 4.9E-21 136.8 10.8 89 1-123 61-149 (423)
76 PRK06209 glutamate-1-semialdeh 99.7 2.1E-16 4.5E-21 138.6 9.7 67 1-72 61-127 (431)
77 TIGR01885 Orn_aminotrans ornit 99.7 3.1E-16 6.6E-21 135.1 9.9 100 2-126 51-150 (401)
78 PRK00854 rocD ornithine--oxo-a 99.7 5E-16 1.1E-20 133.3 10.0 100 1-125 54-153 (401)
79 KOG1403 Predicted alanine-glyo 99.6 4.8E-16 1E-20 132.0 8.3 87 3-122 60-146 (452)
80 PTZ00125 ornithine aminotransf 99.6 3.2E-15 7E-20 127.9 9.9 101 1-126 44-144 (400)
81 PRK02936 argD acetylornithine 99.6 8.8E-15 1.9E-19 124.5 9.9 93 1-126 42-134 (377)
82 PRK03244 argD acetylornithine 99.5 5E-13 1.1E-17 114.7 11.2 94 2-126 57-150 (398)
83 PRK04260 acetylornithine amino 99.4 7.6E-13 1.6E-17 113.0 9.3 91 1-126 42-132 (375)
84 cd00610 OAT_like Acetyl ornith 99.4 8.9E-13 1.9E-17 112.6 9.7 94 1-124 49-142 (413)
85 PRK02627 acetylornithine amino 99.4 1.8E-12 3.8E-17 110.6 9.6 97 1-125 52-148 (396)
86 TIGR00707 argD acetylornithine 99.0 2.8E-09 6.1E-14 90.2 9.2 94 2-123 41-134 (379)
87 PRK07505 hypothetical protein; 98.9 3.6E-09 7.9E-14 91.3 8.9 87 2-118 57-148 (402)
88 PRK13393 5-aminolevulinate syn 98.6 9.9E-08 2.1E-12 82.4 6.8 89 2-124 56-150 (406)
89 TIGR01821 5aminolev_synth 5-am 98.1 1E-05 2.3E-10 69.6 6.8 65 5-72 60-128 (402)
90 PRK09064 5-aminolevulinate syn 97.8 8.8E-05 1.9E-09 63.9 8.3 68 2-72 57-129 (407)
91 PRK07179 hypothetical protein; 97.6 0.00027 5.9E-09 61.0 8.0 62 5-70 69-135 (407)
92 cd00613 GDC-P Glycine cleavage 97.1 0.00086 1.9E-08 57.1 5.2 67 2-71 30-103 (398)
93 PRK13392 5-aminolevulinate syn 96.9 0.0039 8.4E-08 53.9 7.7 61 5-68 61-125 (410)
94 PRK13520 L-tyrosine decarboxyl 96.6 0.01 2.2E-07 49.9 8.0 68 3-72 30-99 (371)
95 cd06454 KBL_like KBL_like; thi 96.6 0.011 2.4E-07 49.0 8.1 66 2-70 12-82 (349)
96 PRK05958 8-amino-7-oxononanoat 96.4 0.021 4.6E-07 48.0 8.5 65 2-69 50-119 (385)
97 PLN02822 serine palmitoyltrans 96.2 0.012 2.6E-07 52.7 6.6 60 5-67 124-187 (481)
98 TIGR01825 gly_Cac_T_rel pyrido 96.2 0.034 7.3E-07 47.1 8.6 65 2-69 44-113 (385)
99 TIGR00858 bioF 8-amino-7-oxono 95.5 0.099 2.1E-06 43.4 8.5 65 2-69 27-96 (360)
100 PRK06939 2-amino-3-ketobutyrat 94.2 0.3 6.6E-06 41.2 8.4 65 2-69 53-122 (397)
101 cd01494 AAT_I Aspartate aminot 93.2 0.29 6.3E-06 35.5 5.8 37 34-71 3-39 (170)
102 TIGR03576 pyridox_MJ0158 pyrid 93.1 0.4 8.8E-06 41.1 7.3 57 5-68 34-90 (346)
103 TIGR03402 FeS_nifS cysteine de 91.8 0.96 2.1E-05 38.4 8.0 64 5-70 11-80 (379)
104 cd00616 AHBA_syn 3-amino-5-hyd 90.9 1.1 2.3E-05 37.3 7.1 38 30-70 17-54 (352)
105 TIGR03235 DNA_S_dndA cysteine 90.4 1.5 3.3E-05 36.7 7.8 64 5-70 10-80 (353)
106 TIGR01788 Glu-decarb-GAD gluta 90.4 0.96 2.1E-05 40.2 6.8 65 6-71 54-123 (431)
107 COG1104 NifS Cysteine sulfinat 90.4 0.65 1.4E-05 41.1 5.6 64 6-71 14-83 (386)
108 TIGR01325 O_suc_HS_sulf O-succ 90.2 0.62 1.3E-05 40.3 5.4 41 26-69 49-89 (380)
109 TIGR01822 2am3keto_CoA 2-amino 90.1 1.9 4.1E-05 36.6 8.2 64 2-68 49-117 (393)
110 PF01041 DegT_DnrJ_EryC1: DegT 89.9 1.1 2.3E-05 38.3 6.5 57 7-70 5-61 (363)
111 PRK06225 aspartate aminotransf 89.8 1.5 3.3E-05 37.2 7.4 61 5-69 42-103 (380)
112 COG2008 GLY1 Threonine aldolas 89.6 0.95 2.1E-05 39.5 6.0 59 5-70 12-71 (342)
113 TIGR02006 IscS cysteine desulf 89.4 2.1 4.6E-05 36.8 8.1 65 5-71 15-86 (402)
114 PRK09331 Sep-tRNA:Cys-tRNA syn 89.2 2 4.3E-05 37.0 7.7 64 3-69 30-98 (387)
115 PRK05937 8-amino-7-oxononanoat 89.1 2.3 5.1E-05 36.2 8.0 57 5-64 19-86 (370)
116 cd06452 SepCysS Sep-tRNA:Cys-t 88.9 1.8 3.9E-05 36.5 7.1 64 3-69 11-79 (361)
117 PLN02651 cysteine desulfurase 88.9 1.5 3.2E-05 37.2 6.6 65 5-71 11-82 (364)
118 TIGR01437 selA_rel uncharacter 87.6 2.1 4.5E-05 36.8 6.7 56 6-70 26-81 (363)
119 TIGR01141 hisC histidinol-phos 87.5 1.8 4E-05 36.0 6.2 58 6-69 34-91 (346)
120 TIGR01326 OAH_OAS_sulfhy OAH/O 87.2 1.6 3.5E-05 38.2 6.0 42 26-70 52-93 (418)
121 PF01212 Beta_elim_lyase: Beta 87.1 0.9 2E-05 38.3 4.1 59 5-71 7-66 (290)
122 PRK15407 lipopolysaccharide bi 86.7 6.7 0.00015 34.8 9.6 37 31-70 63-99 (438)
123 cd06502 TA_like Low-specificit 86.3 2.4 5.1E-05 35.0 6.2 58 5-69 10-67 (338)
124 PLN02955 8-amino-7-oxononanoat 85.9 3.9 8.5E-05 37.2 7.8 61 5-68 117-181 (476)
125 cd00614 CGS_like CGS_like: Cys 85.1 3.4 7.3E-05 35.4 6.8 40 27-69 36-75 (369)
126 PLN03032 serine decarboxylase; 84.9 1.8 4E-05 37.8 5.1 38 34-72 69-108 (374)
127 PRK13034 serine hydroxymethylt 84.8 3.4 7.3E-05 36.2 6.8 63 4-69 39-110 (416)
128 PRK03158 histidinol-phosphate 84.8 3.4 7.3E-05 34.7 6.6 59 5-69 43-101 (359)
129 PLN02721 threonine aldolase 84.1 3.8 8.3E-05 33.9 6.5 59 5-70 18-76 (353)
130 PRK02948 cysteine desulfurase; 83.6 7.3 0.00016 33.0 8.2 66 4-70 11-81 (381)
131 PRK05994 O-acetylhomoserine am 83.2 3.7 7.9E-05 36.3 6.3 40 27-69 59-98 (427)
132 TIGR01977 am_tr_V_EF2568 cyste 83.1 6.5 0.00014 33.0 7.6 63 6-68 13-81 (376)
133 PRK14012 cysteine desulfurase; 82.5 5.5 0.00012 34.2 7.0 65 5-70 15-87 (404)
134 PRK10534 L-threonine aldolase; 82.2 4.2 9E-05 33.7 6.0 56 5-68 12-68 (333)
135 TIGR01364 serC_1 phosphoserine 81.6 5.9 0.00013 34.0 6.9 61 7-67 5-74 (349)
136 cd00609 AAT_like Aspartate ami 81.1 5.6 0.00012 32.3 6.3 36 34-70 43-80 (350)
137 PLN03227 serine palmitoyltrans 81.1 8.1 0.00017 33.5 7.6 61 5-68 13-77 (392)
138 PLN02263 serine decarboxylase 81.0 5.4 0.00012 36.2 6.6 40 34-73 136-176 (470)
139 cd00611 PSAT_like Phosphoserin 81.0 8.8 0.00019 32.7 7.7 63 6-68 11-82 (355)
140 PRK11658 UDP-4-amino-4-deoxy-L 80.3 8 0.00017 33.3 7.3 55 7-69 14-68 (379)
141 PRK06084 O-acetylhomoserine am 80.3 5.4 0.00012 35.3 6.3 42 26-70 53-94 (425)
142 COG0076 GadB Glutamate decarbo 80.2 7.2 0.00016 35.2 7.2 40 35-74 105-144 (460)
143 COG0399 WecE Predicted pyridox 80.0 4.2 9.1E-05 35.9 5.5 53 8-68 16-68 (374)
144 TIGR02379 ECA_wecE TDP-4-keto- 80.0 8.7 0.00019 33.2 7.4 56 7-69 11-66 (376)
145 TIGR03812 tyr_de_CO2_Arch tyro 79.5 11 0.00025 31.5 7.8 65 5-71 32-98 (373)
146 COG0156 BioF 7-keto-8-aminopel 79.2 8.2 0.00018 34.2 7.1 60 5-67 54-117 (388)
147 TIGR01366 serC_3 phosphoserine 79.0 4.1 8.9E-05 35.0 5.0 62 6-67 15-78 (361)
148 PRK07050 cystathionine beta-ly 78.9 9.3 0.0002 33.3 7.3 41 26-69 60-100 (394)
149 PLN02409 serine--glyoxylate am 78.7 2.6 5.6E-05 36.5 3.8 37 32-68 43-79 (401)
150 PRK08133 O-succinylhomoserine 77.9 5.3 0.00012 34.7 5.5 40 27-69 57-96 (390)
151 PF00266 Aminotran_5: Aminotra 77.9 5.1 0.00011 33.9 5.2 66 4-70 10-82 (371)
152 PRK05355 3-phosphoserine/phosp 77.6 7.9 0.00017 33.3 6.4 62 6-67 15-85 (360)
153 TIGR01365 serC_2 phosphoserine 76.9 3.8 8.2E-05 35.9 4.3 60 6-68 15-77 (374)
154 PRK14809 histidinol-phosphate 76.2 11 0.00023 31.8 6.7 58 6-69 45-102 (357)
155 cd06453 SufS_like Cysteine des 76.2 19 0.00041 30.2 8.2 65 6-70 12-82 (373)
156 PRK11706 TDP-4-oxo-6-deoxy-D-g 76.0 7.7 0.00017 33.2 5.9 54 9-69 13-66 (375)
157 cd06450 DOPA_deC_like DOPA dec 75.7 9.8 0.00021 31.4 6.3 39 33-71 40-79 (345)
158 PRK02769 histidine decarboxyla 75.4 11 0.00024 32.9 6.8 39 34-72 68-107 (380)
159 PRK01533 histidinol-phosphate 75.2 12 0.00026 32.0 6.9 58 6-69 44-101 (366)
160 PRK08134 O-acetylhomoserine am 74.6 9.5 0.00021 33.9 6.2 40 27-69 60-99 (433)
161 PRK07682 hypothetical protein; 74.0 30 0.00064 29.3 9.0 63 7-69 36-101 (378)
162 PRK06108 aspartate aminotransf 73.5 18 0.00038 30.5 7.4 64 6-70 39-105 (382)
163 KOG2433 Uncharacterized conser 73.4 7.1 0.00015 35.3 5.0 62 6-73 435-499 (577)
164 PRK03317 histidinol-phosphate 73.3 13 0.00027 31.5 6.5 63 6-69 41-108 (368)
165 PRK07269 cystathionine gamma-s 73.1 11 0.00023 32.6 6.1 40 26-68 49-88 (364)
166 TIGR03301 PhnW-AepZ 2-aminoeth 72.3 6.7 0.00014 32.4 4.5 40 31-70 31-71 (355)
167 PRK03080 phosphoserine aminotr 72.2 9.7 0.00021 32.7 5.6 60 6-67 24-85 (378)
168 PRK14807 histidinol-phosphate 71.3 19 0.0004 30.3 7.0 60 6-69 37-96 (351)
169 PRK09105 putative aminotransfe 70.9 20 0.00044 30.6 7.3 58 6-69 58-115 (370)
170 KOG1549 Cysteine desulfurase N 70.9 34 0.00073 30.9 8.8 67 3-70 53-123 (428)
171 PRK08247 cystathionine gamma-s 68.2 19 0.00042 30.8 6.6 39 26-67 47-85 (366)
172 PRK06358 threonine-phosphate d 67.8 23 0.00049 30.0 6.9 58 6-69 34-91 (354)
173 PRK08861 cystathionine gamma-s 67.7 17 0.00036 31.9 6.2 41 26-69 48-88 (388)
174 PRK02731 histidinol-phosphate 67.2 21 0.00045 30.0 6.5 57 6-68 47-103 (367)
175 PRK06702 O-acetylhomoserine am 66.8 24 0.00051 31.6 7.0 38 28-68 58-95 (432)
176 TIGR03588 PseC UDP-4-keto-6-de 66.7 28 0.0006 29.7 7.2 55 7-69 10-64 (380)
177 PLN00145 tyrosine/nicotianamin 66.7 28 0.00062 30.5 7.4 63 7-69 72-137 (430)
178 TIGR01324 cysta_beta_ly_B cyst 66.3 20 0.00043 31.1 6.3 39 27-68 46-84 (377)
179 PRK00950 histidinol-phosphate 66.3 22 0.00047 29.7 6.4 58 6-69 49-107 (361)
180 PRK10874 cysteine sulfinate de 66.1 34 0.00074 29.1 7.7 63 6-69 32-101 (401)
181 PRK08248 O-acetylhomoserine am 65.3 22 0.00047 31.6 6.5 40 27-69 60-99 (431)
182 PLN02242 methionine gamma-lyas 64.8 16 0.00034 32.3 5.4 40 27-69 72-111 (418)
183 PRK05613 O-acetylhomoserine am 64.7 25 0.00054 31.4 6.7 39 27-68 65-103 (437)
184 PLN02483 serine palmitoyltrans 64.6 44 0.00096 30.0 8.4 61 5-68 116-180 (489)
185 PRK09295 bifunctional cysteine 64.5 41 0.00088 28.8 7.9 62 6-68 36-104 (406)
186 PRK07392 threonine-phosphate d 64.3 26 0.00056 29.5 6.6 57 6-68 37-93 (360)
187 PLN02452 phosphoserine transam 64.0 15 0.00033 31.9 5.1 61 6-67 19-89 (365)
188 PRK06176 cystathionine gamma-s 64.0 23 0.00049 30.8 6.2 39 26-67 45-83 (380)
189 PRK07908 hypothetical protein; 63.7 24 0.00053 29.5 6.2 56 6-67 37-93 (349)
190 TIGR02326 transamin_PhnW 2-ami 63.5 9.6 0.00021 32.0 3.8 37 33-69 37-74 (363)
191 PRK05387 histidinol-phosphate 63.3 23 0.0005 29.5 6.0 58 6-69 39-97 (353)
192 PRK08153 histidinol-phosphate 62.4 22 0.00049 30.2 5.9 58 6-69 47-104 (369)
193 cd06451 AGAT_like Alanine-glyo 62.4 15 0.00032 30.6 4.7 36 33-68 34-69 (356)
194 PRK08056 threonine-phosphate d 62.3 31 0.00067 29.1 6.6 58 6-69 35-92 (356)
195 PRK05968 hypothetical protein; 62.2 30 0.00065 30.0 6.7 39 27-68 59-97 (389)
196 PRK03967 histidinol-phosphate 62.0 34 0.00074 28.6 6.8 59 6-68 33-91 (337)
197 PRK07568 aspartate aminotransf 61.7 40 0.00086 28.6 7.3 21 49-69 88-108 (397)
198 TIGR03811 tyr_de_CO2_Ent tyros 61.7 15 0.00032 34.4 4.9 39 33-72 125-163 (608)
199 PRK04870 histidinol-phosphate 61.5 37 0.00079 28.4 6.9 61 6-69 41-101 (356)
200 TIGR02080 O_succ_thio_ly O-suc 61.4 18 0.00039 31.4 5.1 41 26-69 46-86 (382)
201 PRK08045 cystathionine gamma-s 60.9 26 0.00056 30.5 6.1 40 26-68 47-86 (386)
202 PRK09082 methionine aminotrans 60.8 49 0.0011 28.2 7.7 64 6-69 45-111 (386)
203 TIGR02539 SepCysS Sep-tRNA:Cys 60.3 28 0.00061 29.6 6.1 36 31-69 51-86 (370)
204 PRK14808 histidinol-phosphate 59.8 33 0.00071 28.8 6.3 60 6-69 34-96 (335)
205 TIGR03403 nifS_epsilon cystein 59.8 56 0.0012 27.6 7.8 64 5-69 11-80 (382)
206 TIGR00474 selA seryl-tRNA(sec) 59.7 39 0.00084 30.4 7.1 59 6-67 94-155 (454)
207 PLN02880 tyrosine decarboxylas 59.5 30 0.00065 31.3 6.4 41 33-73 124-170 (490)
208 PRK07812 O-acetylhomoserine am 58.4 21 0.00045 31.8 5.1 38 27-67 65-102 (436)
209 TIGR01976 am_tr_V_VC1184 cyste 58.2 63 0.0014 27.3 7.9 63 6-69 30-97 (397)
210 PF00282 Pyridoxal_deC: Pyrido 56.4 26 0.00057 30.4 5.3 23 51-73 105-127 (373)
211 PRK12414 putative aminotransfe 56.3 67 0.0015 27.4 7.8 63 6-69 44-110 (384)
212 TIGR03392 FeS_syn_CsdA cystein 56.3 81 0.0018 26.8 8.3 63 6-69 29-98 (398)
213 PRK07810 O-succinylhomoserine 56.1 22 0.00048 31.1 4.8 40 26-68 65-104 (403)
214 COG0075 Serine-pyruvate aminot 56.0 16 0.00035 32.4 3.9 58 6-67 17-74 (383)
215 PRK04311 selenocysteine syntha 55.7 50 0.0011 29.8 7.1 60 6-68 99-161 (464)
216 TIGR01265 tyr_nico_aTase tyros 55.5 29 0.00064 29.8 5.5 64 6-70 50-117 (403)
217 TIGR01328 met_gam_lyase methio 55.0 25 0.00054 30.6 5.0 40 26-68 54-93 (391)
218 PRK07777 aminotransferase; Val 55.0 65 0.0014 27.3 7.5 61 6-67 39-103 (387)
219 PLN02590 probable tyrosine dec 54.9 42 0.0009 31.0 6.6 39 35-73 174-218 (539)
220 PRK12462 phosphoserine aminotr 54.5 33 0.00073 30.0 5.7 60 6-67 16-86 (364)
221 PRK00451 glycine dehydrogenase 54.0 36 0.00078 29.6 5.8 32 35-67 116-147 (447)
222 PRK07683 aminotransferase A; V 53.8 76 0.0016 27.1 7.7 63 6-69 43-109 (387)
223 PRK07671 cystathionine beta-ly 53.4 52 0.0011 28.4 6.7 39 26-67 45-83 (377)
224 PRK08249 cystathionine gamma-s 53.4 43 0.00093 29.3 6.2 39 27-68 60-98 (398)
225 PRK06434 cystathionine gamma-l 53.0 30 0.00065 30.3 5.1 39 27-68 60-98 (384)
226 PLN02656 tyrosine transaminase 52.8 77 0.0017 27.3 7.6 64 6-69 50-116 (409)
227 PRK06207 aspartate aminotransf 52.6 74 0.0016 27.4 7.5 64 6-69 55-122 (405)
228 PRK08574 cystathionine gamma-s 52.6 50 0.0011 28.7 6.4 40 27-69 49-88 (385)
229 PRK08114 cystathionine beta-ly 52.5 41 0.00089 29.7 5.9 39 26-67 57-95 (395)
230 PLN02855 Bifunctional selenocy 52.5 90 0.0019 26.9 8.0 62 6-68 45-113 (424)
231 PRK05166 histidinol-phosphate 52.1 51 0.0011 27.9 6.3 58 6-69 51-108 (371)
232 PRK00011 glyA serine hydroxyme 51.2 53 0.0011 28.2 6.4 29 39-69 79-107 (416)
233 PRK07503 methionine gamma-lyas 50.8 31 0.00068 30.1 4.9 39 27-68 61-99 (403)
234 PRK06767 methionine gamma-lyas 50.8 32 0.00068 29.7 4.9 38 27-67 57-94 (386)
235 PRK08064 cystathionine beta-ly 49.9 64 0.0014 28.0 6.7 38 27-67 50-87 (390)
236 TIGR03538 DapC_gpp succinyldia 49.1 85 0.0018 26.7 7.3 65 6-70 43-111 (393)
237 PRK05764 aspartate aminotransf 49.0 82 0.0018 26.6 7.1 63 6-69 46-111 (393)
238 PLN02187 rooty/superroot1 48.8 62 0.0014 28.8 6.6 59 8-69 87-151 (462)
239 PRK08776 cystathionine gamma-s 48.7 71 0.0015 28.0 6.8 41 26-69 55-95 (405)
240 PRK07049 methionine gamma-lyas 48.5 67 0.0014 28.4 6.7 41 26-69 78-118 (427)
241 PRK06107 aspartate aminotransf 48.3 87 0.0019 26.8 7.3 62 6-68 48-112 (402)
242 PRK13355 bifunctional HTH-doma 48.1 69 0.0015 28.8 6.8 64 6-69 164-228 (517)
243 PRK08363 alanine aminotransfer 47.4 96 0.0021 26.4 7.4 64 6-69 48-113 (398)
244 PRK08361 aspartate aminotransf 47.3 74 0.0016 27.1 6.6 63 6-69 48-113 (391)
245 PRK07582 cystathionine gamma-l 47.1 62 0.0013 27.8 6.1 38 27-68 47-84 (366)
246 TIGR03799 NOD_PanD_pyr putativ 47.0 43 0.00094 30.7 5.4 22 52-73 162-183 (522)
247 PRK02610 histidinol-phosphate 46.5 77 0.0017 26.9 6.6 59 6-67 43-109 (374)
248 TIGR03537 DapC succinyldiamino 46.5 1.2E+02 0.0026 25.4 7.7 63 6-69 15-80 (350)
249 PRK03321 putative aminotransfe 46.5 72 0.0016 26.6 6.3 56 6-67 37-92 (352)
250 PLN03026 histidinol-phosphate 45.8 76 0.0017 27.1 6.5 57 6-69 67-123 (380)
251 KOG2862 Alanine-glyoxylate ami 45.2 30 0.00065 30.4 3.8 22 1-22 40-61 (385)
252 PTZ00433 tyrosine aminotransfe 45.1 95 0.0021 26.8 7.0 21 49-69 104-124 (412)
253 PRK08912 hypothetical protein; 45.0 1.1E+02 0.0023 26.0 7.3 61 6-68 41-106 (387)
254 PRK05839 hypothetical protein; 44.7 1.1E+02 0.0023 26.1 7.2 63 6-69 39-103 (374)
255 PRK06234 methionine gamma-lyas 44.7 44 0.00096 29.0 4.9 38 27-67 60-97 (400)
256 TIGR01264 tyr_amTase_E tyrosin 44.6 59 0.0013 27.8 5.6 63 6-69 50-115 (401)
257 TIGR01329 cysta_beta_ly_E cyst 44.0 88 0.0019 27.0 6.6 38 27-67 43-80 (378)
258 PRK08960 hypothetical protein; 42.8 1.2E+02 0.0025 25.8 7.2 63 6-69 47-112 (387)
259 TIGR01979 sufS cysteine desulf 42.4 1.8E+02 0.0038 24.7 8.2 64 6-69 31-100 (403)
260 smart00542 FYRC "FY-rich" doma 42.1 17 0.00037 25.1 1.6 14 1-14 52-65 (86)
261 PRK13479 2-aminoethylphosphona 41.9 33 0.00071 28.8 3.6 39 31-69 37-76 (368)
262 COG0079 HisC Histidinol-phosph 41.3 1.3E+02 0.0027 26.1 7.2 59 7-71 38-97 (356)
263 TIGR01814 kynureninase kynuren 41.2 62 0.0013 27.8 5.2 62 5-68 39-105 (406)
264 PRK05957 aspartate aminotransf 40.9 1.5E+02 0.0033 25.2 7.6 64 6-69 42-109 (389)
265 PRK05939 hypothetical protein; 40.9 1.2E+02 0.0027 26.4 7.1 41 26-69 42-82 (397)
266 PRK07811 cystathionine gamma-s 40.1 62 0.0013 28.0 5.1 40 27-69 57-96 (388)
267 PLN00175 aminotransferase fami 40.0 1.5E+02 0.0033 25.6 7.6 62 6-68 69-134 (413)
268 KOG1359 Glycine C-acetyltransf 40.0 58 0.0013 28.6 4.7 56 5-63 82-141 (417)
269 cd00617 Tnase_like Tryptophana 39.9 77 0.0017 28.3 5.7 35 32-69 54-88 (431)
270 PRK05967 cystathionine beta-ly 39.8 1.1E+02 0.0023 27.0 6.6 38 27-67 60-97 (395)
271 KOG1368 Threonine aldolase [Am 39.7 44 0.00095 29.4 3.9 37 31-70 56-92 (384)
272 PRK08354 putative aminotransfe 39.3 1.5E+02 0.0032 24.4 7.1 53 5-68 21-73 (311)
273 PRK13238 tnaA tryptophanase/L- 39.2 1E+02 0.0022 27.6 6.5 54 8-68 58-112 (460)
274 PRK15481 transcriptional regul 38.8 1.3E+02 0.0029 26.0 7.0 20 50-69 142-161 (431)
275 PRK09265 aminotransferase AlaT 38.7 1.5E+02 0.0032 25.4 7.2 62 6-69 51-115 (404)
276 cd00378 SHMT Serine-glycine hy 38.6 83 0.0018 26.7 5.6 63 5-69 31-101 (402)
277 cd00615 Orn_deC_like Ornithine 38.6 69 0.0015 26.3 5.0 38 29-69 57-95 (294)
278 PRK09147 succinyldiaminopimela 38.2 1.7E+02 0.0036 24.9 7.4 63 6-69 44-110 (396)
279 PRK07504 O-succinylhomoserine 37.8 68 0.0015 27.9 5.0 39 27-68 61-99 (398)
280 PRK07309 aromatic amino acid a 37.6 1.7E+02 0.0038 24.9 7.5 64 6-69 45-111 (391)
281 PRK07324 transaminase; Validat 36.7 1.2E+02 0.0026 25.8 6.3 58 7-69 42-100 (373)
282 PLN00143 tyrosine/nicotianamin 36.6 1.6E+02 0.0035 25.4 7.2 63 6-69 51-117 (409)
283 PRK07550 hypothetical protein; 35.3 1.9E+02 0.0041 24.4 7.3 65 6-70 44-111 (386)
284 PF01053 Cys_Met_Meta_PP: Cys/ 34.5 1.3E+02 0.0028 26.5 6.2 41 26-69 50-90 (386)
285 PF08664 YcbB: YcbB domain; I 34.5 49 0.0011 25.1 3.1 36 7-42 69-104 (134)
286 PRK01688 histidinol-phosphate 34.0 66 0.0014 27.1 4.2 41 28-69 54-94 (351)
287 PRK07865 N-succinyldiaminopime 33.7 2.3E+02 0.0051 23.7 7.5 61 6-69 42-106 (364)
288 PRK09028 cystathionine beta-ly 33.4 1.4E+02 0.0031 26.2 6.3 38 27-67 57-94 (394)
289 PF01555 N6_N4_Mtase: DNA meth 31.8 51 0.0011 25.1 3.0 42 29-72 173-216 (231)
290 PRK08068 transaminase; Reviewe 31.7 2.4E+02 0.0053 23.9 7.4 64 5-68 46-113 (389)
291 PRK07337 aminotransferase; Val 31.1 2.1E+02 0.0045 24.2 6.8 62 6-68 45-109 (388)
292 PRK06425 histidinol-phosphate 31.0 1.1E+02 0.0023 25.5 5.0 40 28-68 37-76 (332)
293 KOG0259 Tyrosine aminotransfer 30.6 2.4E+02 0.0053 25.5 7.2 62 7-68 81-145 (447)
294 PF01904 DUF72: Protein of unk 30.3 68 0.0015 25.9 3.5 43 29-71 186-229 (230)
295 TIGR03539 DapC_actino succinyl 30.3 3.1E+02 0.0067 23.0 7.7 62 6-69 36-100 (357)
296 COG0436 Aspartate/tyrosine/aro 29.5 3E+02 0.0066 24.0 7.7 64 6-69 43-109 (393)
297 PLN02509 cystathionine beta-ly 28.4 2.1E+02 0.0046 25.8 6.6 37 28-67 130-166 (464)
298 PLN02994 1-aminocyclopropane-1 28.3 2.5E+02 0.0054 21.3 6.2 39 31-70 96-138 (153)
299 PRK13260 2,3-diketo-L-gulonate 28.1 64 0.0014 28.0 3.1 16 57-72 89-104 (332)
300 PRK15025 ureidoglycolate dehyd 28.0 64 0.0014 28.2 3.2 16 57-72 89-104 (349)
301 PF07704 PSK_trans_fac: Rv0623 27.2 1.2E+02 0.0027 20.7 3.9 31 29-69 6-36 (82)
302 TIGR02981 phageshock_pspE phag 26.4 1.7E+02 0.0037 20.4 4.7 41 30-70 40-80 (101)
303 PRK06460 hypothetical protein; 25.6 1.4E+02 0.0029 25.8 4.8 39 27-68 41-79 (376)
304 PF00155 Aminotran_1_2: Aminot 25.6 2.4E+02 0.0053 23.2 6.2 66 2-70 13-89 (363)
305 PRK07366 succinyldiaminopimela 25.3 3.5E+02 0.0076 22.8 7.2 63 6-68 45-111 (388)
306 PRK13237 tyrosine phenol-lyase 24.4 1.3E+02 0.0028 27.5 4.5 33 31-66 78-110 (460)
307 PRK06836 aspartate aminotransf 24.2 3E+02 0.0066 23.4 6.7 36 34-69 80-116 (394)
308 PF06753 Bradykinin: Bradykini 24.2 40 0.00087 17.0 0.7 10 108-117 9-18 (19)
309 TIGR02618 tyr_phenol_ly tyrosi 24.0 2.3E+02 0.0049 25.8 6.0 33 30-65 70-102 (450)
310 COG2861 Uncharacterized protei 23.8 1.1E+02 0.0024 25.7 3.6 61 7-72 106-172 (250)
311 PRK12566 glycine dehydrogenase 23.4 2.4E+02 0.0053 28.2 6.4 43 33-79 545-588 (954)
312 PLN00105 malate/L-lactate dehy 23.3 86 0.0019 27.1 3.1 16 57-72 78-93 (330)
313 PTZ00377 alanine aminotransfer 22.9 2.6E+02 0.0057 24.7 6.2 62 7-70 91-159 (481)
314 PRK10098 putative dehydrogenas 22.6 91 0.002 27.2 3.1 16 57-72 93-108 (350)
315 PRK04635 histidinol-phosphate 22.0 1.5E+02 0.0032 24.9 4.3 36 33-69 62-97 (354)
316 PF12390 Se-cys_synth_N: Selen 21.8 89 0.0019 18.3 2.1 17 3-19 22-38 (40)
317 PTZ00094 serine hydroxymethylt 21.8 2.8E+02 0.006 24.4 6.1 30 39-69 88-120 (452)
318 PF05965 FYRC: F/Y rich C-term 21.4 30 0.00065 23.6 -0.1 14 1-14 56-69 (86)
319 PRK07590 L,L-diaminopimelate a 21.0 3.4E+02 0.0073 23.2 6.4 60 6-66 49-116 (409)
320 TIGR01140 L_thr_O3P_dcar L-thr 20.6 1.9E+02 0.004 24.0 4.5 35 33-68 49-83 (330)
321 PLN02231 alanine transaminase 20.6 4.8E+02 0.01 23.8 7.5 37 33-70 174-212 (534)
322 cd05009 SIS_GlmS_GlmD_2 SIS (S 20.6 2.1E+02 0.0045 20.5 4.3 24 49-72 13-39 (153)
323 PRK10287 thiosulfate:cyanide s 20.2 2.6E+02 0.0057 19.7 4.6 40 32-71 44-83 (104)
324 TIGR03175 AllD ureidoglycolate 20.1 1.1E+02 0.0023 26.8 3.1 16 57-72 89-104 (349)
No 1
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=4.7e-28 Score=210.21 Aligned_cols=116 Identities=27% Similarity=0.230 Sum_probs=100.4
Q ss_pred CCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCccc
Q 031493 2 FRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVLV 81 (158)
Q Consensus 2 ~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~~ 81 (158)
+||+||+|++|+++|++++.+.+ ..|.+++..+||++|++.+| . +++|||+|||+||||+|||+||+|+. +.
T Consensus 56 lGH~hP~iv~al~~Q~~kl~h~s-n~~~~~~~~~la~~L~~~s~-~-~d~vff~NSGaEA~EaAiKlARk~~~---~~-- 127 (404)
T COG4992 56 LGHCHPALVEALKEQAEKLWHVS-NLFYNEPQAELAEKLVELSP-F-ADRVFFCNSGAEANEAALKLARKYTG---DP-- 127 (404)
T ss_pred cCCCCHHHHHHHHHHHHHhhhcc-cccCChHHHHHHHHHHhhCc-c-ccEEEEcCCcHHHHHHHHHHHHHHcC---CC--
Confidence 79999999999999999999986 57899999999999999998 6 89999999999999999999999853 11
Q ss_pred cccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC--CcccccccccccccccccCC
Q 031493 82 DFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG--TLEEAFFWTLLQFSCTTANG 146 (158)
Q Consensus 82 ~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~--~~~~~~~~~~~~~~~~~~~~ 146 (158)
.| .+||+ |.++|||||+|++|.++ +|++.|.+....|..++.|+
T Consensus 128 --~k---------~~Iia----------~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnD 173 (404)
T COG4992 128 --EK---------SKIIA----------FENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFND 173 (404)
T ss_pred --CC---------cEEEE----------EcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCC
Confidence 33 48999 99999999999999866 47888885555677766665
No 2
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.94 E-value=1e-26 Score=204.83 Aligned_cols=125 Identities=26% Similarity=0.217 Sum_probs=102.0
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcC-CCCCCcEEEeCChHHHHHHHHHHHHhcccccCCc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVG-KGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDV 79 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P-~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~ 79 (158)
.+||+||+|.+|+++|+++|.|+++..+.++++++||++|++++| ++ +++|||++|||||||.|||||++| ++.+|+
T Consensus 57 ~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~~-l~~vFf~~sGSeAvEtAlKma~qY-~~~~G~ 134 (449)
T COG0161 57 NHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEGG-LDHVFFTDSGSEAVETALKMALQY-WRARGQ 134 (449)
T ss_pred hcCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCCC-ccEEEEeCCchHHHHHHHHHHHHH-HHhcCC
Confidence 379999999999999999999997778889999999999999999 55 999999999999999999999986 455676
Q ss_pred cccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCCc-cc--ccccccccccccccCCccc
Q 031493 80 LVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGTL-EE--AFFWTLLQFSCTTANGFFP 149 (158)
Q Consensus 80 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~~-~~--~~~~~~~~~~~~~~~~~~~ 149 (158)
+ +| .++|+ +++||||.|+|++|..|.. .. .++..+....+.+.+..|+
T Consensus 135 --p-~r---------~~~Is----------r~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~ 185 (449)
T COG0161 135 --P-QR---------KKFIS----------RRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYR 185 (449)
T ss_pred --C-cc---------eEEEE----------eccCcCcccchheeccCchhhhhhhccccccCceecCCCcccc
Confidence 2 34 47999 9999999999999998842 22 2233333444555555543
No 3
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.92 E-value=6.4e-25 Score=193.73 Aligned_cols=98 Identities=21% Similarity=0.218 Sum_probs=86.5
Q ss_pred CCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCccc
Q 031493 2 FRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVLV 81 (158)
Q Consensus 2 ~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~~ 81 (158)
+|||||+|++|+++|++++.|++...+..++.+++||+|.+++|...++++||+||||||||+|||+||.++ |+
T Consensus 70 ~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~T----gr-- 143 (447)
T COG0160 70 LGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYT----GR-- 143 (447)
T ss_pred cCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHh----CC--
Confidence 699999999999999999998875344559999999999999997338999999999999999999999874 44
Q ss_pred cccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCCc
Q 031493 82 DFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGTL 128 (158)
Q Consensus 82 ~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~~ 128 (158)
..||+ |.++|||+|.+++|.++..
T Consensus 144 -------------~~via----------f~~afHG~T~galslT~~~ 167 (447)
T COG0160 144 -------------PGVIA----------FDGAFHGRTLGALSLTGSK 167 (447)
T ss_pred -------------CcEEE----------ECCcccccchhhHHhccCc
Confidence 26999 9999999999999987753
No 4
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.90 E-value=5.5e-24 Score=183.80 Aligned_cols=105 Identities=18% Similarity=0.096 Sum_probs=92.6
Q ss_pred CCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCccc
Q 031493 2 FRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVLV 81 (158)
Q Consensus 2 ~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~~ 81 (158)
+|||||+|++|+.+|+.++.|.. ..|.+++..+|||+|++.+|++ ++++||+||||||||+|+||||.|+ +.
T Consensus 64 lGHchP~v~~a~~kQl~~l~H~t-~~~~~~pi~~~Ae~L~s~~P~~-l~~vfF~nsGsEANelal~mar~Yt----~~-- 135 (442)
T KOG1404|consen 64 LGHCHPDVVAAAVKQLKKLYHTT-SGYLNPPIHDLAEALVSKLPGD-LKVVFFVNSGSEANELALKMARLYT----GN-- 135 (442)
T ss_pred cCCCChHHHHHHHHhhhhhEEee-ccccCCcHHHHHHHHHHhCCCC-ceEEEEecCCchHHHHHHHHHHHhc----CC--
Confidence 69999999999999999898875 4789999999999999999988 9999999999999999999999874 32
Q ss_pred cccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCCcccccccccc
Q 031493 82 DFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGTLEEAFFWTLL 137 (158)
Q Consensus 82 ~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~~~~~~~~~~~ 137 (158)
.+||+ ++++|||.|..++|.++.-..++..+..
T Consensus 136 -------------~diIa----------~r~~YHG~t~~t~glt~~~~~k~~~~~~ 168 (442)
T KOG1404|consen 136 -------------LDIIA----------RRNSYHGNTLYTLGLTGLSPWKQNFPGV 168 (442)
T ss_pred -------------ceEEE----------eeccccCCchhhcccccCCcccccCCCC
Confidence 47999 9999999999999988765545555554
No 5
>PRK07482 hypothetical protein; Provisional
Probab=99.90 E-value=1.3e-23 Score=185.80 Aligned_cols=103 Identities=16% Similarity=0.082 Sum_probs=86.9
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCC-CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMF-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDV 79 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~-~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~ 79 (158)
.+||+||+|++|+++|++++.+.+. ..+.+++.++|||+|++++|.+ +++|+|+||||||||+|||+||+++.. +|+
T Consensus 63 ~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~-~~~v~f~~sGSEAve~AlKlAr~~~~~-~g~ 140 (461)
T PRK07482 63 NVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAG-MSKVYYGLSGSDANETQIKLVWYYNNV-LGR 140 (461)
T ss_pred cCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCchHHHHHHHHHHHHHHHHh-cCC
Confidence 4899999999999999999876542 2578999999999999999876 899999999999999999999986432 343
Q ss_pred cccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 80 LVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 80 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ |+++|||+|++++|.++.
T Consensus 141 --~-~r---------~~Ii~----------~~~~YHG~t~ga~s~~~~ 166 (461)
T PRK07482 141 --P-EK---------KKIIS----------RWRGYHGSGVVTGSLTGL 166 (461)
T ss_pred --C-CC---------ceEEE----------ecCccCCccHhhhhccCC
Confidence 1 23 38999 999999999998887664
No 6
>PRK07483 hypothetical protein; Provisional
Probab=99.89 E-value=4.5e-23 Score=181.54 Aligned_cols=103 Identities=21% Similarity=0.200 Sum_probs=87.1
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+++...+.+++..+|||+|++++|.+ +++|+|+||||||||+|||+||+++. .+|+
T Consensus 43 ~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGsEAve~AlklAr~~~~-~~g~- 119 (443)
T PRK07483 43 CLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAG-LEHVYFVSGGSEAVEAALKLARQYFV-EIGQ- 119 (443)
T ss_pred ccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC-CCEEEEcCCcHHHHHHHHHHHHHHHH-hcCC-
Confidence 48999999999999999998765533467899999999999999876 89999999999999999999998743 2343
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ |+++|||+|.+++|.++.
T Consensus 120 -~-~r---------~~Ii~----------~~~~YHG~t~~a~s~s~~ 145 (443)
T PRK07483 120 -P-QR---------RHFIA----------RRQSYHGNTLGALAIGGN 145 (443)
T ss_pred -C-CC---------cEEEE----------ECCCcCCcCHHHhhhcCC
Confidence 1 23 37999 999999999998887664
No 7
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.89 E-value=4.6e-23 Score=181.42 Aligned_cols=103 Identities=17% Similarity=0.107 Sum_probs=87.3
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.+++..+|||+|++++|.+ +++|+|+||||||||+|||+||+++.. +|+
T Consensus 59 ~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~AlklAr~~~~~-~g~- 135 (442)
T PRK13360 59 NAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGG-LNHVFFTNSGSESVDTALKIALAYHRA-RGE- 135 (442)
T ss_pred ccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHHHHHHHh-cCC-
Confidence 37999999999999999998876544578999999999999999876 899999999999999999999987432 232
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ |+++|||+|.|++|.++.
T Consensus 136 -~-~r---------~~ii~----------~~~~yHG~t~gals~tg~ 161 (442)
T PRK13360 136 -G-SR---------TRLIG----------RERGYHGVGFGGISVGGI 161 (442)
T ss_pred -C-CC---------cEEEE----------EcCCcCCccHhhhhccCC
Confidence 0 12 37999 999999999999887764
No 8
>PRK05965 hypothetical protein; Provisional
Probab=99.89 E-value=3.7e-23 Score=182.75 Aligned_cols=103 Identities=13% Similarity=0.041 Sum_probs=86.3
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCC-CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMF-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDV 79 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~-~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~ 79 (158)
.+||+||+|++|+++|++++.+... ..+.+++.++|||+|++++|.+ +++|+|+||||||||+|||+||+|+. .+|+
T Consensus 59 ~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGSEAve~AlKlAr~~~~-~~g~ 136 (459)
T PRK05965 59 NVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGS-LNHVYFTLGGSDAVDSAVRFIRHYWN-ATGR 136 (459)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCC-cCEEEEeCChhHHHHHHHHHHHHHHH-hcCC
Confidence 4799999999999999999887542 2467899999999999999876 89999999999999999999998743 2343
Q ss_pred cccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 80 LVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 80 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ +.++|||.|.+++|..+.
T Consensus 137 --~-~r---------~kii~----------~~~~YHG~t~~a~s~t~~ 162 (459)
T PRK05965 137 --P-SK---------KQFIS----------LERGYHGSSSVGAGLTAL 162 (459)
T ss_pred --C-Cc---------cEEEE----------ecCCcCcccHHHHHhcCC
Confidence 1 23 38999 999999999987776553
No 9
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=6.4e-23 Score=181.29 Aligned_cols=103 Identities=25% Similarity=0.290 Sum_probs=87.3
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
++||+||+|++|+++|++++.+.....+.+++..+|||+|++++|.+ +++|+|+||||||||+|||+||+++.. +|.
T Consensus 69 ~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseAve~AlklAr~~~~~-~g~- 145 (460)
T PRK06916 69 VHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEG-LKKVFYSDSGATAVEIAIKMAFQYWQN-KGK- 145 (460)
T ss_pred hcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHHHHHHHh-cCC-
Confidence 48999999999999999998876544578999999999999999876 789999999999999999999987532 232
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ |+++|||+|.+++|.++.
T Consensus 146 -t-gr---------~~ii~----------~~~~YHG~t~~als~s~~ 171 (460)
T PRK06916 146 -P-KK---------QRFVT----------LKNAYHGDTIGAVSVGAI 171 (460)
T ss_pred -C-CC---------cEEEE----------ECCcCCcccHHhHhccCC
Confidence 1 22 37999 999999999998887653
No 10
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=6.4e-23 Score=182.15 Aligned_cols=104 Identities=26% Similarity=0.326 Sum_probs=87.3
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCC----CCCcEEEeCChHHHHHHHHHHHHhccccc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKG----WASRAYFSDNGSTAIEIALKMAFRKFSFD 76 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~----~l~~v~f~~SGSEA~E~AlKlAR~~~~~~ 76 (158)
.+||+||+|++|+++|++++.+.....+.+++..+|||+|++++|.. ++++|+|+||||||||+|||+||+|+..
T Consensus 77 ~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~- 155 (472)
T PRK08742 77 LFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHN- 155 (472)
T ss_pred cCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHh-
Confidence 48999999999999999998876544678999999999999998751 2789999999999999999999997543
Q ss_pred CCccccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 77 HDVLVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 77 ~g~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+|+ + .| .+||+ |+++|||+|++++|.++.
T Consensus 156 ~g~--~-~r---------~~ii~----------~~~syHG~t~gals~~~~ 184 (472)
T PRK08742 156 RGE--H-RR---------TRFIA----------LENGYHGETIGALAVGDI 184 (472)
T ss_pred cCC--C-CC---------cEEEE----------ECCCcCCCchhhhhccCC
Confidence 243 1 22 38999 999999999999887664
No 11
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=6.3e-23 Score=180.03 Aligned_cols=102 Identities=25% Similarity=0.269 Sum_probs=87.2
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+..+..+.+++..+|||+|++.+|.+ +++|+|++|||||||+|||+||+++.. +|+
T Consensus 57 ~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGseAve~AlklAr~~~~~-~g~- 133 (429)
T PRK06173 57 LHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPS-LNKIFFADSGSVAVEVAMKMALQYQQA-KGE- 133 (429)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCC-cCEEEEeCCchHHHHHHHHHHHHHHHH-hCC-
Confidence 47999999999999999998876544578999999999999999876 899999999999999999999987432 343
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
+ .| .+||+ ++++|||+|.+++|.++
T Consensus 134 -~-~r---------~~ii~----------~~~~yHG~t~~a~s~~~ 158 (429)
T PRK06173 134 -V-QR---------TKFAT----------IRSGYHGDTWHAMSVCD 158 (429)
T ss_pred -C-CC---------cEEEE----------ECCCcCCcchhhhccCC
Confidence 1 22 37999 99999999999888755
No 12
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=8.1e-23 Score=178.94 Aligned_cols=102 Identities=25% Similarity=0.273 Sum_probs=87.1
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.|||+||+|++|+++|++++.+..+..+.+++..+|||+|++++|.+ +++|+|++|||||||+|||+||+++.. +|+
T Consensus 53 ~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseA~e~AlklAr~~~~~-~g~- 129 (422)
T PRK05630 53 AHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNG-LDHVFYSDSGSVSVEVAIKMALQYSKG-QGH- 129 (422)
T ss_pred cCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCC-cCEEEEeCCcHHHHHHHHHHHHHHHHh-cCC-
Confidence 48999999999999999998876544578999999999999999876 899999999999999999999987532 233
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
+ .| .+||+ ++++|||+|.+++|..+
T Consensus 130 -~-~r---------~~ii~----------~~~~yHG~t~~als~~~ 154 (422)
T PRK05630 130 -P-ER---------TRLLT----------WRSGYHGDTFAAMSVCD 154 (422)
T ss_pred -C-CC---------cEEEE----------ECCCcCCccHHHhccCC
Confidence 1 22 37999 99999999999888755
No 13
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=8.7e-23 Score=180.23 Aligned_cols=103 Identities=24% Similarity=0.284 Sum_probs=87.5
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.+++..+|||+|++++|.. +++|+|+||||||||+|||+||+++.. +|.
T Consensus 67 ~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~-~~~v~f~~sGseAve~AlKlA~~~~~~-rg~- 143 (453)
T PRK06943 67 LFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGT-LGHAFFASDGASAVEIALKMSFHAWRN-RGR- 143 (453)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCCHHHHHHHHHHHHHHHHH-hCC-
Confidence 48999999999999999998876544678999999999999999866 789999999999999999999987532 232
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ ++++|||+|+|++|.++.
T Consensus 144 -~-~r---------~~Ii~----------~~~~yHG~t~gals~~~~ 169 (453)
T PRK06943 144 -G-DK---------REFVC----------LANGYHGETIGALGVTDV 169 (453)
T ss_pred -C-CC---------CEEEE----------ECCCcCCCcHHhhcccCC
Confidence 1 22 37999 999999999998887764
No 14
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=8.6e-23 Score=180.91 Aligned_cols=103 Identities=25% Similarity=0.330 Sum_probs=87.7
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
++||+||+|++|+++|++++.+.....+.++...+|||+|++++|.+ +++|+|+||||||||+|||+||+++.. +|+
T Consensus 60 ~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGsEAve~AlKlAr~~~~~-~g~- 136 (466)
T PRK07030 60 VFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPG-LSRCFYADNGSSAIEVALKMSFHYWRN-RGK- 136 (466)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHHHHHHHHHH-hCC-
Confidence 48999999999999999998876544678999999999999999866 899999999999999999999987532 243
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ ++++|||+|.+++|.++.
T Consensus 137 -t-~r---------~~ii~----------~~~~yHG~t~ga~s~~~~ 162 (466)
T PRK07030 137 -P-RK---------KRFVT----------LTNSYHGETLAAMSVGDV 162 (466)
T ss_pred -C-CC---------cEEEE----------ECCCcCcccHHHHhccCC
Confidence 1 22 37999 999999999998887654
No 15
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.89 E-value=6.6e-23 Score=191.98 Aligned_cols=113 Identities=55% Similarity=0.748 Sum_probs=87.5
Q ss_pred CC-CCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 2 FR-WFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 2 ~G-h~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
+| |+||+|++|+++|++++.|+++..+.++++++|||+|++..|.+++++|||++|||||||+||||||++++.++|+
T Consensus 379 lG~h~~p~I~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~- 457 (817)
T PLN02974 379 PDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGF- 457 (817)
T ss_pred CCcCCCHHHHHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCC-
Confidence 67 6899999999999999999876578899999999999996553347899999999999999999998655544453
Q ss_pred ccccC-C-CcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLG-K-DTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~-~-~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
+..+ . .........+||+ ++++|||.|+|++|..+
T Consensus 458 -~~~~~~~~~~~~~~r~kIIa----------~~gsYHG~T~GAms~sg 494 (817)
T PLN02974 458 -LENSGNEKRGGDLIELKVLA----------LDGSYHGDTLGAMEAQA 494 (817)
T ss_pred -CcccccccccccCCCCEEEE----------ECCCcCCCCHHHHhhCC
Confidence 1000 0 0000001158999 99999999999998765
No 16
>PRK06917 hypothetical protein; Provisional
Probab=99.88 E-value=1.1e-22 Score=179.24 Aligned_cols=103 Identities=24% Similarity=0.200 Sum_probs=86.6
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.+++..+|||+|++++|.. +++++|+||||||||+|||+||+++.. +|+
T Consensus 44 ~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGsEAve~AlklAr~~~~~-rg~- 120 (447)
T PRK06917 44 GIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGD-LNWSFFVNSGSEANETAMKIAIQHFQE-RGI- 120 (447)
T ss_pred cCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCChHHHHHHHHHHHHHHHHh-cCC-
Confidence 48999999999999999998765433578999999999999999876 789999999999999999999987532 343
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ |+++|||.|.++++..+.
T Consensus 121 -t-~r---------~~ii~----------~~~~yHG~t~~als~~~~ 146 (447)
T PRK06917 121 -Q-GK---------HKILS----------RWMSYHGITMGALSMSGH 146 (447)
T ss_pred -C-CC---------CEEEE----------ECCCcCCccHHHHHhcCC
Confidence 1 22 37999 999999999998876553
No 17
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.88 E-value=9.5e-23 Score=179.82 Aligned_cols=99 Identities=15% Similarity=0.041 Sum_probs=85.1
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.. ..+.++...+|||+|+++.|.+ +++|+|+||||||||+|+|+||+++. .+|+
T Consensus 88 ~lGh~hp~v~~Av~~ql~~l~~~~-~~~~~~~~~~lAe~L~~~~p~~-~~~v~f~~SGsEA~e~AlklAr~~t~-~~gr- 163 (442)
T TIGR03372 88 NVGHRNPNVIAAVENQLAKQPLHS-QELLDPLRALLAKTLAALTPGK-LKYSFFCNSGTESVEAALKLAKAYQS-PRGK- 163 (442)
T ss_pred hcCCCCHHHHHHHHHHHHhCCCcc-cccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCchHHHHHHHHHHHHHHh-hcCC-
Confidence 379999999999999999987654 2467899999999999999977 78999999999999999999998742 1233
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
.+||+ +.++|||+|.+++|.++.
T Consensus 164 --------------~~ii~----------~~~~yHG~t~~~ls~t~~ 186 (442)
T TIGR03372 164 --------------FTFIA----------ASGAFHGKSLGALSATAK 186 (442)
T ss_pred --------------cEEEE----------ECCCccCCCHHHhhccCC
Confidence 37999 999999999998887653
No 18
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.88 E-value=1.1e-22 Score=178.80 Aligned_cols=96 Identities=19% Similarity=0.163 Sum_probs=84.1
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCC-CcEEEeCChHHHHHHHHHHHHhcccccCCc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWA-SRAYFSDNGSTAIEIALKMAFRKFSFDHDV 79 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l-~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~ 79 (158)
.+||+||+|++|+++|++++.+.....+.+++..+|||+|++++|.+ + ++|+|+||||||||+|||+||+++ |+
T Consensus 67 ~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGseA~e~AlklAr~~t----gr 141 (451)
T PRK06918 67 NVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAEAVENAVKIARKYT----KR 141 (451)
T ss_pred CCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHHHHHHHHHHHHHHh----CC
Confidence 48999999999999999998876544567899999999999999865 5 599999999999999999999873 43
Q ss_pred cccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 80 LVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 80 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ |+++|||+|.+++|..+
T Consensus 142 ---------------~~ii~----------~~~~yHG~t~~~ls~~~ 163 (451)
T PRK06918 142 ---------------QGIIS----------FSRGFHGRTLMTMTMTS 163 (451)
T ss_pred ---------------CcEEE----------ECCCcCccchhhhhhcC
Confidence 27999 99999999999888765
No 19
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.88 E-value=1.4e-22 Score=176.53 Aligned_cols=103 Identities=26% Similarity=0.266 Sum_probs=86.8
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+..+..+.++...+|||+|++.+|.+ +++|+|++|||||||+|||+||+++.. +|+
T Consensus 55 ~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~A~klar~~~~~-~~~- 131 (423)
T PRK05964 55 THGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGG-LDHVFFSDSGSVAVEVALKMALQYWRN-RGE- 131 (423)
T ss_pred cCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHHHHHHHh-cCC-
Confidence 48999999999999999998876543578999999999999999866 889999999999999999999987432 333
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ +.++|||+|.+++|..+.
T Consensus 132 -~-~r---------~~ii~----------~~~~yHG~t~~~ls~~~~ 157 (423)
T PRK05964 132 -P-GR---------SRFLS----------LRGGYHGDTIGTMSVGDR 157 (423)
T ss_pred -C-CC---------cEEEE----------EcCCcCCccHHHHhcCCC
Confidence 1 22 38999 999999999998876553
No 20
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.88 E-value=1.3e-22 Score=178.15 Aligned_cols=101 Identities=24% Similarity=0.278 Sum_probs=86.4
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.+++..+|||+|++++|.+ +++|+|+||||||||+|||+||+++.. +|.
T Consensus 56 ~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~-~~~v~f~~SGsEAve~AlklAr~~~~~-~g~- 132 (428)
T PRK07986 56 IHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQP-LECVFLADSGSVAVEVAMKMALQYWQA-KGE- 132 (428)
T ss_pred cCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCC-cCEEEEeCCcHHHHHHHHHHHHHHHHh-cCC-
Confidence 47999999999999999998876544568999999999999999876 899999999999999999999987432 222
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.| .+||+ ++++|||+|.+++|..+
T Consensus 133 ---~r---------~kii~----------~~~~yHG~t~~a~s~~~ 156 (428)
T PRK07986 133 ---PR---------QRFLT----------LRHGYHGDTFGAMSVCD 156 (428)
T ss_pred ---CC---------cEEEE----------ECCCcCCCcHhhhcccC
Confidence 22 37999 99999999999888755
No 21
>PRK06541 hypothetical protein; Provisional
Probab=99.88 E-value=1.9e-22 Score=178.43 Aligned_cols=103 Identities=25% Similarity=0.202 Sum_probs=87.3
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.+++..+||++|++++|.+ +++|+|+||||||||+|||+||+++. .+|+
T Consensus 65 ~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseAve~AlklAr~~~~-~~g~- 141 (460)
T PRK06541 65 QVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIELAERLAALAPGD-LNRVFFTTGGSEAVESAWKLAKQYFK-LTGK- 141 (460)
T ss_pred cCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCC-cCEEEEcCCcHHHHHHHHHHHHHHHH-hcCC-
Confidence 38999999999999999998876434678999999999999999876 89999999999999999999998742 2343
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ |+++|||+|.+++|..+.
T Consensus 142 -~-~r---------~~ii~----------~~~~yHG~t~~a~s~~~~ 167 (460)
T PRK06541 142 -P-GK---------HKVIS----------RAIAYHGTTQGALAITGL 167 (460)
T ss_pred -C-Cc---------cEEEE----------EcCcccCcchhhhcCcCC
Confidence 1 22 37999 999999999998887654
No 22
>PRK07481 hypothetical protein; Provisional
Probab=99.88 E-value=2.3e-22 Score=177.20 Aligned_cols=104 Identities=19% Similarity=0.139 Sum_probs=85.8
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCC-CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMF-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDV 79 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~-~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~ 79 (158)
.+||+||+|++|+++|++++.+... ..+.+++.++|||+|++++|++++++|+|++|||||||+|||+||+++.. +|+
T Consensus 55 ~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~-~g~ 133 (449)
T PRK07481 55 NVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKV-RGQ 133 (449)
T ss_pred cCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHh-cCC
Confidence 4899999999999999999887542 25689999999999999984322889999999999999999999987532 343
Q ss_pred cccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 80 LVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 80 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ ++++|||+|.+++|.++.
T Consensus 134 --~-~r---------~~ii~----------~~~~yHG~t~ga~s~~~~ 159 (449)
T PRK07481 134 --P-ER---------TKFIS----------LKQGYHGTHFGGASVNGN 159 (449)
T ss_pred --C-CC---------cEEEE----------ECCCcCCcchhhhccCCC
Confidence 1 22 37999 999999999998887653
No 23
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.88 E-value=2.3e-22 Score=177.15 Aligned_cols=103 Identities=19% Similarity=0.128 Sum_probs=87.7
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.+++..+|||+|++++|.+ +++|+|+||||||||+|||+||+++.. +|+
T Consensus 62 ~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~-~~~v~f~~sGseAve~AlklAr~~~~~-~g~- 138 (445)
T PRK09221 62 NAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGG-LDHVFFTNSGSESVDTALKIALAYHRA-RGQ- 138 (445)
T ss_pred cCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHHHHHHHh-cCC-
Confidence 48999999999999999998876544578999999999999999876 899999999999999999999987532 232
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ |+++|||+|.|++|.++.
T Consensus 139 -~-~r---------~~ii~----------~~~~yHG~t~gals~~~~ 164 (445)
T PRK09221 139 -G-TR---------TRLIG----------RERGYHGVGFGGISVGGI 164 (445)
T ss_pred -C-CC---------cEEEE----------ECCCcCccchhhhccCCC
Confidence 1 12 37999 999999999999887764
No 24
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.88 E-value=1.5e-22 Score=178.99 Aligned_cols=96 Identities=21% Similarity=0.123 Sum_probs=82.8
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.++...+|||+|++.+|.+ +++|+|+||||||||+|||+||+++ |+
T Consensus 66 ~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGsEA~e~AlklAr~~t----gr- 139 (457)
T PRK05639 66 STGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIE-NPKVLFGLSGSDAVDMAIKVSKFST----RR- 139 (457)
T ss_pred ccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCC-cCEEEEeCchHHHHHHHHHHHHHhc----CC-
Confidence 48999999999999999998776533345788999999999999866 7899999999999999999999863 43
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ |+++|||+|.+++|..+
T Consensus 140 --------------~~ii~----------~~~~yHG~t~~a~s~~~ 161 (457)
T PRK05639 140 --------------PWILA----------FIGAYHGQTLGATSVAA 161 (457)
T ss_pred --------------CeEEE----------ECCCcCCccHHHHHHcC
Confidence 27999 99999999999877654
No 25
>PRK07480 putative aminotransferase; Validated
Probab=99.88 E-value=2.8e-22 Score=177.11 Aligned_cols=103 Identities=19% Similarity=0.115 Sum_probs=86.6
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCC-CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMF-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDV 79 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~-~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~ 79 (158)
.+||+||+|++|+++|++++.+... ..+.++...+|||+|++.+|.+ +++|+|++|||||||+|||+||+++. .+|+
T Consensus 63 ~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseA~e~AlklAr~~~~-~~g~ 140 (456)
T PRK07480 63 NVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPG-FNHVFFTNSGSEANDTVLRMVRHYWA-LKGK 140 (456)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHHHHHHHHH-hcCC
Confidence 4899999999999999999876532 2468999999999999999876 89999999999999999999998743 2343
Q ss_pred cccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 80 LVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 80 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ +.++|||+|++++|.++.
T Consensus 141 --~-~r---------~~ii~----------~~~~yHG~tl~a~s~~g~ 166 (456)
T PRK07480 141 --P-QK---------KVIIS----------RKNGYHGSTVAGASLGGM 166 (456)
T ss_pred --C-CC---------cEEEE----------ECCCcCCcchhhhhccCC
Confidence 1 22 37999 999999999998887664
No 26
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.88 E-value=2.2e-22 Score=177.02 Aligned_cols=97 Identities=23% Similarity=0.277 Sum_probs=84.1
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.+++..+|||+|++++|.+++++|+|+||||||||+|||+||++ +|+
T Consensus 67 ~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~----tgr- 141 (441)
T PRK05769 67 NVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYH----TGR- 141 (441)
T ss_pred ccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHH----hCC-
Confidence 489999999999999999988765445678999999999999998543689999999999999999999987 343
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ +.++|||.|.+++|..+
T Consensus 142 --------------~~Ii~----------~~~~yHG~t~~~ls~t~ 163 (441)
T PRK05769 142 --------------KYIIA----------FLGAFHGRTYGSLSLTA 163 (441)
T ss_pred --------------CeEEE----------ECCCcCCccHHHHHhcC
Confidence 27999 99999999999887654
No 27
>PRK06062 hypothetical protein; Provisional
Probab=99.88 E-value=1.8e-22 Score=178.10 Aligned_cols=96 Identities=21% Similarity=0.149 Sum_probs=85.7
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.+. .+.+++..+|||+|++++|.+ +++|+|+||||||||+|||+||+++ |+
T Consensus 66 ~lGh~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGsEAve~AlklAr~~t----gr- 138 (451)
T PRK06062 66 NIGHQHPKVVAAIQEQAARLCTVAP-AHANDARSEAARLIAERAPGD-LSKVFFTNGGADANEHAVRMARLHT----GR- 138 (451)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCcCC-ccCCHHHHHHHHHHHHhCCCC-CCEEEEcCChHHHHHHHHHHHHHhh----CC-
Confidence 4899999999999999999887754 678999999999999999876 8999999999999999999999873 43
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
.+||+ +.++|||+|.+++|.++.
T Consensus 139 --------------~~ii~----------~~~~yHG~t~~als~~~~ 161 (451)
T PRK06062 139 --------------PKVLS----------AYRSYHGGTGSAINLTGD 161 (451)
T ss_pred --------------ceEEE----------EeCCCCCCCHHHHhhcCC
Confidence 27999 999999999998887653
No 28
>PRK06105 aminotransferase; Provisional
Probab=99.88 E-value=3.7e-22 Score=176.44 Aligned_cols=102 Identities=16% Similarity=0.154 Sum_probs=85.2
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCC-CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMF-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDV 79 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~-~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~ 79 (158)
.+||+||+|++|+++|++++.+.+. ..+.++..++|||+|++++|.+ +++|+|+||||||||+|||+||+++. .+|.
T Consensus 61 ~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseAve~AlKlar~~~~-~~g~ 138 (460)
T PRK06105 61 ALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVP-MSKVFFTNSGSEANDTVVKLVWYYNN-ALGR 138 (460)
T ss_pred cCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHHHHHHH-hcCC
Confidence 4899999999999999999876432 2467999999999999999876 89999999999999999999997642 2232
Q ss_pred cccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 80 LVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 80 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
+ .| .+||+ +.++|||+|++++|.++
T Consensus 139 --t-~r---------~~il~----------~~~~yHG~t~~a~s~t~ 163 (460)
T PRK06105 139 --P-EK---------KKIIS----------RQRGYHGVTIASASLTG 163 (460)
T ss_pred --C-CC---------cEEEE----------ecCccCCcchhheeccC
Confidence 1 22 37999 99999999999888765
No 29
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=2.2e-22 Score=174.46 Aligned_cols=109 Identities=29% Similarity=0.292 Sum_probs=89.4
Q ss_pred CCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCccc
Q 031493 2 FRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVLV 81 (158)
Q Consensus 2 ~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~~ 81 (158)
+||+||+|.+|+.+|+.++.|.+. .+.+.++++++++|.+....++.++|||+||||||||.|||+||+++...++.
T Consensus 70 ~Ghanpev~ral~~q~~k~~hs~~-~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~-- 146 (433)
T KOG1401|consen 70 LGHANPEVARALAEQAKKLGHSSN-GYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPE-- 146 (433)
T ss_pred cCCCCHHHHHHHHHHHhhheeccC-ccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCc--
Confidence 799999999999999999999864 44455599999999998766568999999999999999999999986543322
Q ss_pred cccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC--Cccccccc
Q 031493 82 DFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG--TLEEAFFW 134 (158)
Q Consensus 82 ~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~--~~~~~~~~ 134 (158)
++ ++||+ |+|+|||+|+|++|..+ .|.-+|+.
T Consensus 147 ---~~--------t~~Ia----------f~nsyHG~tlgals~~~~s~y~~~~~p 180 (433)
T KOG1401|consen 147 ---KK--------TKFIA----------FENSYHGRTLGALSVTGNSKYGLPFDP 180 (433)
T ss_pred ---cc--------eeEEE----------EecCcCCcchhHHHhhcccccCCCCCC
Confidence 21 58999 99999999999999543 45555544
No 30
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.87 E-value=3.7e-22 Score=176.67 Aligned_cols=99 Identities=15% Similarity=0.028 Sum_probs=85.3
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.+ ..+.++...+|||+|++++|.+ +++|+|+||||||||+|||+||+++.. +|+
T Consensus 95 ~lGH~~p~v~~Ai~~ql~~l~~~~-~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGsEAve~AlklAr~~t~~-~gr- 170 (459)
T PRK11522 95 NVGHRNPVVVSAVQNQLAKQPLHS-QELLDPLRAMLAKTLAALTPGK-LKYSFFCNSGTESVEAALKLAKAYQSP-RGK- 170 (459)
T ss_pred hcCCCCHHHHHHHHHHHhhCcccc-cccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCchHHHHHHHHHHHHHhcc-CCC-
Confidence 489999999999999999987764 3567999999999999999977 889999999999999999999987421 122
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
.+||+ ++++|||+|.+++|.++.
T Consensus 171 --------------~~ii~----------~~~~yHG~t~~~ls~~~~ 193 (459)
T PRK11522 171 --------------FTFIA----------TSGAFHGKSLGALSATAK 193 (459)
T ss_pred --------------cEEEE----------ecCCCCCCcHHHhhhcCC
Confidence 37999 999999999998887653
No 31
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.87 E-value=3.6e-22 Score=173.89 Aligned_cols=97 Identities=19% Similarity=0.123 Sum_probs=83.8
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.+++..+|||+|++++|..++++|+|++|||||||+|||+||++ +|+
T Consensus 46 ~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~----tgr- 120 (420)
T TIGR00700 46 NIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSY----TGR- 120 (420)
T ss_pred cCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHh----cCC-
Confidence 489999999999999999988765434678889999999999998532689999999999999999999987 344
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ |.++|||+|.+++|.++
T Consensus 121 --------------~~ii~----------~~~~yHG~t~~~~~~~~ 142 (420)
T TIGR00700 121 --------------PGVVA----------FDHGFHGRTNMTMALTA 142 (420)
T ss_pred --------------CcEEE----------ECCCcCCCcHHHHHhcC
Confidence 26999 99999999999887655
No 32
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.87 E-value=3.7e-22 Score=174.84 Aligned_cols=97 Identities=22% Similarity=0.119 Sum_probs=83.5
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.++...+|||+|++.+|.+..++|+|+||||||||+|||+||++ +|+
T Consensus 53 ~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~----tgr- 127 (425)
T PRK07495 53 NTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAA----TGR- 127 (425)
T ss_pred ccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHh----hCC-
Confidence 479999999999999999988764335778999999999999998652379999999999999999999987 344
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ |+++|||+|+++++..+
T Consensus 128 --------------~~ii~----------~~~~yHG~t~~~~~~~~ 149 (425)
T PRK07495 128 --------------SAVIA----------FGGGFHGRTFMGMSLTG 149 (425)
T ss_pred --------------CeEEE----------ECCCcCCccHHHhhhcC
Confidence 27999 99999999999877654
No 33
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.87 E-value=3.7e-22 Score=175.69 Aligned_cols=97 Identities=19% Similarity=0.032 Sum_probs=84.8
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.+...+.++..++|||+|++++|.+ +++|+|+||||||||+|||+||+++ |+
T Consensus 54 ~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~-~~~v~f~~sGsEAve~AlklAr~~t----gr- 127 (443)
T PRK08360 54 NVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGD-NPKVSFGLSGSDANDGAIKFARAYT----KR- 127 (443)
T ss_pred ccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCC-CCEEEEcCCHHHHHHHHHHHHHHhc----CC-
Confidence 48999999999999999998876543456889999999999999876 7899999999999999999999873 43
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
.+||+ +.++|||.|.+++|.++.
T Consensus 128 --------------~~ii~----------~~~~yHG~t~~a~s~~~~ 150 (443)
T PRK08360 128 --------------RKILS----------YLRSYYGSTYGAMSLTGL 150 (443)
T ss_pred --------------CeEEE----------EeCCcCCcCHHHHHhcCC
Confidence 27999 999999999998877653
No 34
>PRK07036 hypothetical protein; Provisional
Probab=99.87 E-value=7e-22 Score=175.02 Aligned_cols=103 Identities=19% Similarity=0.109 Sum_probs=86.3
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCC-CCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPE-NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDV 79 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~-~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~ 79 (158)
.+||+||+|++|+++|++++.+..... +.+++..+|||+|++++|.+ +++|+|+||||||||+|||+||+++.. +|+
T Consensus 64 ~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGseAve~AlklAr~~~~~-~g~ 141 (466)
T PRK07036 64 NVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGD-LNHVFLTTGGSTAVDSALRFVHYYFNV-RGR 141 (466)
T ss_pred cCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCchHHHHHHHHHHHHHHHh-cCC
Confidence 489999999999999999987754333 78999999999999999877 899999999999999999999986422 342
Q ss_pred cccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 80 LVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 80 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ |.++|||.|.+++|.++.
T Consensus 142 --t-~r---------~~Ii~----------~~~~YHG~t~~a~s~~~~ 167 (466)
T PRK07036 142 --P-AK---------KHIIT----------RGDAYHGSTYLTASLTGK 167 (466)
T ss_pred --C-Cc---------cEEEE----------EcCccCCccHhhhcccCC
Confidence 1 22 37999 999999999998887664
No 35
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.86 E-value=7.8e-22 Score=173.69 Aligned_cols=105 Identities=19% Similarity=0.109 Sum_probs=84.7
Q ss_pred CCCCCcHHHHH--HHHHHHHhcCcc--CCCCCCChHHHHHHHHHHhhc-CCCCCCcEEEeCChHHHHHHHHHHHHhcccc
Q 031493 1 MFRWFQIELAR--DMGYTAARFGHV--MFPENVYEPALECAELLLQGV-GKGWASRAYFSDNGSTAIEIALKMAFRKFSF 75 (158)
Q Consensus 1 ~~Gh~hP~Iv~--Av~eQl~~l~~~--~~~~~~~~~~~~LAe~L~~~~-P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~ 75 (158)
.+||+||+|++ |+++|++++.+. ....+.++...+|+|+|++++ |++ +++|+|+||||||||+|||+||+|+..
T Consensus 58 ~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~-~~~v~f~~SGsEAve~AlKlAr~~~~~ 136 (443)
T PRK08297 58 ALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPE-LPHLFFVDGGALAVENALKVAFDWKSR 136 (443)
T ss_pred cCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCC-CCEEEEeCchHHHHHHHHHHHHHHhhc
Confidence 48999999999 999999987642 222577899999999999998 656 899999999999999999999987532
Q ss_pred ---cCCccccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 76 ---DHDVLVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 76 ---~~g~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+|+..+ .| .+||+ |+++|||+|.+++|.++
T Consensus 137 ~~~~~g~~~~-~r---------~kii~----------~~~~yHG~t~~als~~~ 170 (443)
T PRK08297 137 KNEARGIDPA-LG---------TKVLH----------LRGAFHGRSGYTLSLTN 170 (443)
T ss_pred cccccCCCCC-CC---------ceEEE----------ECCCcCCcchhhhhhcC
Confidence 1232000 12 38999 99999999999888765
No 36
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=1e-21 Score=171.53 Aligned_cols=97 Identities=15% Similarity=0.062 Sum_probs=83.8
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.+++.++|||+|++++|..++++++|+||||||||+|||+||++ +|+
T Consensus 53 ~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~----tgr- 127 (421)
T PRK06777 53 NTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAY----TGR- 127 (421)
T ss_pred ccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHh----hCC-
Confidence 489999999999999999988765444678999999999999988422689999999999999999999986 344
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ |+++|||+|.+++|.++
T Consensus 128 --------------~~ii~----------~~~~yHG~t~~~~s~t~ 149 (421)
T PRK06777 128 --------------PGVIA----------FGGAFHGRTLLTMALTG 149 (421)
T ss_pred --------------CeEEE----------EcCCcCCccHHHHhhcC
Confidence 27999 99999999999887655
No 37
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=1e-21 Score=172.86 Aligned_cols=97 Identities=20% Similarity=0.088 Sum_probs=84.1
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.++...+|||+|+++.|....++|+|+||||||||+|||+||+++ |+
T Consensus 55 ~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~t----gr- 129 (445)
T PRK08593 55 NVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYT----GR- 129 (445)
T ss_pred cCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhh----CC-
Confidence 3899999999999999999887654346799999999999999986523699999999999999999999873 43
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ ++++|||.|.+++|.++
T Consensus 130 --------------~~ii~----------~~~~YHG~t~~als~s~ 151 (445)
T PRK08593 130 --------------PYIIS----------FTNAYHGSTYGSLSMSG 151 (445)
T ss_pred --------------CeEEE----------ECCCcCCCcHHHHhhcC
Confidence 27999 99999999999887665
No 38
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.86 E-value=1.4e-21 Score=170.63 Aligned_cols=97 Identities=18% Similarity=0.103 Sum_probs=83.9
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.+++.++|||+|+++.|..++++++|++|||||||+|||+||++ +|+
T Consensus 53 ~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~----tgr- 127 (421)
T PRK09792 53 NTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAH----TGR- 127 (421)
T ss_pred cCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHh----cCC-
Confidence 489999999999999999988765445689999999999999987432579999999999999999999986 344
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ +.++|||.|.+++|.++
T Consensus 128 --------------~~ii~----------~~~~yHG~t~~~~s~~~ 149 (421)
T PRK09792 128 --------------PGVIA----------FSGGFHGRTYMTMALTG 149 (421)
T ss_pred --------------CeEEE----------ECCCcCCccHHHHhhcC
Confidence 27999 99999999999888755
No 39
>PRK07678 aminotransferase; Validated
Probab=99.86 E-value=1.6e-21 Score=171.96 Aligned_cols=101 Identities=23% Similarity=0.184 Sum_probs=85.0
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+... .+.+++..+|||+|++++|. .++|+|+||||||||+|||+||+++.. +|+
T Consensus 60 ~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~lae~l~~~~~~--~~~v~f~~sGseA~e~AlklAr~~t~~-~g~- 134 (451)
T PRK07678 60 NVGYGRKELAEAAYEQLKTLSYFPL-TQSHEPAIKLAEKLNEWLGG--EYVIFFSNSGSEANETAFKIARQYHAQ-KGE- 134 (451)
T ss_pred cCCCCCHHHHHHHHHHHHhcCcccc-ccCCHHHHHHHHHHHHhCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHh-cCC-
Confidence 4799999999999999999887653 56889999999999999874 469999999999999999999987532 343
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ |+++|||+|.+++|..+.
T Consensus 135 -~-~r---------~~ii~----------~~~~yHG~t~~als~~~~ 160 (451)
T PRK07678 135 -P-HR---------YKFIS----------RYRAYHGNSMGALAATGQ 160 (451)
T ss_pred -C-CC---------cEEEE----------ECCCcCCccHHHhhcCCC
Confidence 1 22 37999 999999999998887654
No 40
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.86 E-value=3e-22 Score=170.46 Aligned_cols=102 Identities=27% Similarity=0.241 Sum_probs=83.6
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
+|||+||+|.+|+++|++++.+.+...+.++...+|+++|.+.+|++ +++|+|++|||||||+|||+||+++.. ++.
T Consensus 29 ~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~-~~~v~f~~sGseAve~Alkla~~~~~~-~~~- 105 (339)
T PF00202_consen 29 NLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGG-LDRVFFANSGSEAVEAALKLARQYHNK-RAY- 105 (339)
T ss_dssp TT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTT-EEEEEEESSHHHHHHHHHHHHHHHHHH-THH-
T ss_pred ecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccc-cceeeeccCchHHHHHHHHHhhccccc-ccc-
Confidence 58999999999999999999887655788999999999999999876 899999999999999999999954322 121
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
+ .| .+||+ |+++|||+|++++|..+
T Consensus 106 -~-~r---------~~il~----------~~~~yHG~t~~~~s~~~ 130 (339)
T PF00202_consen 106 -T-GR---------RKILA----------FEGSYHGRTLGALSLTG 130 (339)
T ss_dssp -H-TT---------TEEEE----------ETTTB-TSSHHHHHHSS
T ss_pred -c-CC---------ceEEE----------eeeeeeccCcccccccC
Confidence 1 22 38999 99999999999877543
No 41
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.86 E-value=1.5e-21 Score=170.25 Aligned_cols=102 Identities=17% Similarity=0.118 Sum_probs=84.6
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+... .+.+++..+|+|+|+++.|. .++|+|++|||||||+|||+||+++. .+|+
T Consensus 53 ~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~la~~L~~~~~~--~~~v~f~~sGseA~e~AlklAr~~~~-~~g~- 127 (408)
T PRK04612 53 GLGHNDPDLVAALTEQAGKLWHTSN-VFYSAPPLKLAEELVTASRF--AEKVFLCNSGTEANEAAIKLVRKWAS-SQGR- 127 (408)
T ss_pred cCCCCCHHHHHHHHHHHHhcccccc-ccCCHHHHHHHHHHHhhCCC--CCEEEEcCchHHHHHHHHHHHHHHHH-hhCC-
Confidence 4899999999999999999877642 46789999999999999873 57999999999999999999998753 2343
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+..| .+||+ |+++|||+|.+++|..+.
T Consensus 128 -~~~r---------~~ii~----------~~~~yHG~t~~~~s~~~~ 154 (408)
T PRK04612 128 -PADK---------RVIVT----------FRGSFHGRTLAAVTATAQ 154 (408)
T ss_pred -CCCC---------cEEEE----------ECCCcCCccHHHHHhcCC
Confidence 1122 37999 999999999998876653
No 42
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=3.7e-21 Score=167.97 Aligned_cols=96 Identities=24% Similarity=0.138 Sum_probs=83.4
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.....+.++...+|+|+|++++|+. +++|+|+||||||||+|||+||+++ |+
T Consensus 56 ~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~-~~~v~f~~SGseA~e~AlklAr~~t----gr- 129 (433)
T PRK08117 56 NVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGG-LDCFFFSNSGAEAIEGALKLAKHVT----KR- 129 (433)
T ss_pred cCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCcHHHHHHHHHHHHHHhc----CC-
Confidence 48999999999999999998776433467899999999999999866 8899999999999999999999873 43
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ +.++|||+|.+++|..+
T Consensus 130 --------------~~ii~----------~~~~yHG~t~~~~s~~~ 151 (433)
T PRK08117 130 --------------PYIIS----------FTGCFHGRTLGALSVTT 151 (433)
T ss_pred --------------CeEEE----------ECCCcCCcCHHHHhhcC
Confidence 27999 99999999999876544
No 43
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.85 E-value=3.5e-21 Score=172.33 Aligned_cols=119 Identities=16% Similarity=0.087 Sum_probs=90.4
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCC-CCCCChHHHHHHHHHHhhcC-CCCCCcEEEeCChHHHHHHHHHHHHhcccccCC
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMF-PENVYEPALECAELLLQGVG-KGWASRAYFSDNGSTAIEIALKMAFRKFSFDHD 78 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~-~~~~~~~~~~LAe~L~~~~P-~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g 78 (158)
.+||+||+|++|+++|++++.+.+. ..+.+++.++|||+|+++++ .+ +++|+|+||||||||+|||+||+|+. .+|
T Consensus 102 ~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~-~~~v~f~~SGsEA~e~AlKlAr~~~~-~~g 179 (504)
T PLN02760 102 ALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARK-MGKVFFTNSGSEANDTQVKLVWYYNN-ALG 179 (504)
T ss_pred ccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCC-CCEEEEeCChHHHHHHHHHHHHHHHH-hcC
Confidence 4899999999999999999876532 14578999999999999854 44 78999999999999999999998642 234
Q ss_pred ccccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC--cccccccccccccccc
Q 031493 79 VLVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT--LEEAFFWTLLQFSCTT 143 (158)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~--~~~~~~~~~~~~~~~~ 143 (158)
+ + .| .+||+ +.++|||+|++++|..+. +...|.++...+...+
T Consensus 180 ~--~-~r---------~~iI~----------~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~ 224 (504)
T PLN02760 180 R--P-NK---------KKFIA----------RSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTD 224 (504)
T ss_pred C--C-CC---------cEEEE----------ECCCccCChHhhhhccCChhhccCCCCCCCCcEEeC
Confidence 3 1 22 37999 999999999998876653 3334444433333333
No 44
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.85 E-value=3.3e-21 Score=168.86 Aligned_cols=106 Identities=16% Similarity=0.082 Sum_probs=84.5
Q ss_pred CCCCCcHHHH--HHHHHHHHhcCcc--CCCCCCChHHHHHHHHHHhhc-CCCCCCcEEEeCChHHHHHHHHHHHHhcccc
Q 031493 1 MFRWFQIELA--RDMGYTAARFGHV--MFPENVYEPALECAELLLQGV-GKGWASRAYFSDNGSTAIEIALKMAFRKFSF 75 (158)
Q Consensus 1 ~~Gh~hP~Iv--~Av~eQl~~l~~~--~~~~~~~~~~~~LAe~L~~~~-P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~ 75 (158)
.+||+||+|+ +|+++|++++.+. ....+.+++..+++++|++++ |++ +++|+|+||||||||+|||+||+|+.+
T Consensus 51 ~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~v~f~~sGsEAve~AlklAr~~t~~ 129 (431)
T TIGR03251 51 ALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPA-LPHLFFIEGGALAVENALKTAFDWKSR 129 (431)
T ss_pred CCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCC-cCEEEEeCCcHHHHHHHHHHHHHHhhc
Confidence 4899999999 9999999987542 223567888999999999987 555 899999999999999999999997532
Q ss_pred ---cCCccccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 76 ---DHDVLVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 76 ---~~g~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
.+|+..+ .| .+||+ |.++|||+|.+++|.++.
T Consensus 130 ~~~~~g~~~~-~~---------~~ii~----------~~~~yHG~t~~als~~~~ 164 (431)
T TIGR03251 130 HNQARGIPAA-LG---------TQVLH----------LRQAFHGRSGYTLSLTNT 164 (431)
T ss_pred chhhcCCCCC-CC---------ceEEE----------ECCccCCcchhhhhccCC
Confidence 1343100 12 37999 999999999998887663
No 45
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.85 E-value=3.7e-21 Score=168.05 Aligned_cols=96 Identities=19% Similarity=0.157 Sum_probs=79.2
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhc--CCCCCC-cEEE-eCChHHHHHHHHHHHHhccccc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGV--GKGWAS-RAYF-SDNGSTAIEIALKMAFRKFSFD 76 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~--P~~~l~-~v~f-~~SGSEA~E~AlKlAR~~~~~~ 76 (158)
.+||+||+|++|+++|++++.+.+...+.++...+|||+|++++ |.+ ++ +++| +||||||||+|||+||++
T Consensus 52 ~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~-~~~~~~f~~~sGseA~e~AlklAr~~---- 126 (425)
T PRK09264 52 NYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRG-LDYKVQFTGPTGTNAVEAALKLARKV---- 126 (425)
T ss_pred cCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcC-CCceEEEeCCCHHHHHHHHHHHHHHh----
Confidence 48999999999999999987665433467889999999999974 433 44 6766 589999999999999987
Q ss_pred CCccccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 77 HDVLVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 77 ~g~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
+|+ .+||+ ++++|||+|.+++|..+
T Consensus 127 tgr---------------~~ii~----------~~~~yHG~t~~~ls~~~ 151 (425)
T PRK09264 127 TGR---------------TNIVA----------FTNGFHGMTLGSLAVTG 151 (425)
T ss_pred cCC---------------CeEEE----------ECCccCCccHHHHHhcC
Confidence 343 27999 99999999999888755
No 46
>PLN00144 acetylornithine transaminase
Probab=99.85 E-value=3.5e-21 Score=166.18 Aligned_cols=107 Identities=19% Similarity=0.174 Sum_probs=84.2
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+... .+.+++..+|||+|++..| .++|+|++|||||||+|||+||+++.+ +++
T Consensus 28 ~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~la~~l~~~~~---~~~v~f~~sGseA~e~AlklAr~~~~~-~~~- 101 (382)
T PLN00144 28 ALGHGDPDWVKAVAEQAGTLAHVSN-VYHTIPQVELAKRLVASSF---ADRVFFCNSGTEANEAAIKFARKYQRV-RAP- 101 (382)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCccc-cccCHHHHHHHHHHHhcCC---CCeEEEeCCcHHHHHHHHHHHHHHHhc-cCC-
Confidence 4899999999999999999887653 4568999999999999865 679999999999999999999987543 222
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .+ ..+++...+||+ ++++|||+|.+++|..+.
T Consensus 102 -~-~~--~~~~~~r~~ii~----------~~~~yHG~t~~~~s~~~~ 134 (382)
T PLN00144 102 -D-KK--DPAASSATEFVS----------FSNSFHGRTLGALALTSK 134 (382)
T ss_pred -C-Cc--cccccccceEEE----------ECCCcccccHHHHhcCCC
Confidence 0 10 011111248999 999999999998876653
No 47
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=5.2e-21 Score=169.20 Aligned_cols=96 Identities=23% Similarity=0.232 Sum_probs=84.1
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.. ..+.++...+|+|+|++++|.+ +++|+|++|||||||+|+|+||++ +|+
T Consensus 84 ~lGh~~p~v~~Ai~~ql~~~~~~~-~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGseAve~AlklAr~~----tgr- 156 (459)
T PRK06082 84 QLGYGHPHVIEKVKEQMAKLPFSP-RRFTNETAIECAEKLTEIAGGE-LNRVLFAPGGTSAIGMALKLARHI----TGN- 156 (459)
T ss_pred ccCCCCHHHHHHHHHHHHhCCCcc-CccCCHHHHHHHHHHHHhCCCC-CCEEEECCCcHHHHHHHHHHHHHh----cCC-
Confidence 389999999999999999987654 3578999999999999999866 789999999999999999999987 343
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
.+||+ |.++|||+|.++++..+.
T Consensus 157 --------------~~ii~----------~~~~yHG~t~~a~s~~~~ 179 (459)
T PRK06082 157 --------------FKVVS----------LWDSFHGASLDAISVGGE 179 (459)
T ss_pred --------------CEEEE----------EeCCCcCccHHHHhhcCC
Confidence 27999 999999999998876653
No 48
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.84 E-value=9.7e-21 Score=166.40 Aligned_cols=97 Identities=14% Similarity=0.020 Sum_probs=81.0
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCC--CCCcEEEeCChHHHHHHHHHHHHhcccccCC
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKG--WASRAYFSDNGSTAIEIALKMAFRKFSFDHD 78 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~--~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g 78 (158)
.+||+||+|++|+++|++++.+.+...+.++..++|||+|++++|.. ...++||+||||||||+|||+||++ +|
T Consensus 52 ~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~----tg 127 (442)
T TIGR00709 52 ALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTY----TG 127 (442)
T ss_pred cCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHh----cC
Confidence 48999999999999999987765433477899999999999999842 1245677899999999999999987 34
Q ss_pred ccccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 79 VLVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
+ .+||+ +.++|||.|.++++..+
T Consensus 128 r---------------~~Ii~----------~~~~yHG~t~~~~s~t~ 150 (442)
T TIGR00709 128 R---------------TNVIS----------FSGGFHGMTIGALAVTG 150 (442)
T ss_pred C---------------CeEEE----------EcCCcCCchHHHHhhcC
Confidence 3 27999 99999999999887765
No 49
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.84 E-value=8.4e-21 Score=165.34 Aligned_cols=96 Identities=21% Similarity=0.180 Sum_probs=78.4
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhc--CCCCC-CcEEE-eCChHHHHHHHHHHHHhccccc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGV--GKGWA-SRAYF-SDNGSTAIEIALKMAFRKFSFD 76 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~--P~~~l-~~v~f-~~SGSEA~E~AlKlAR~~~~~~ 76 (158)
.+||+||+|++|+++|++++.+.+...+.++...+|||+|++++ |.+ + ++++| +||||||||+|||+||++
T Consensus 48 ~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~-~~~~~~f~~~sGseA~e~AlklAr~~---- 122 (412)
T TIGR02407 48 NYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRG-LDYKVQFPGPTGTNAVESALKLARKV---- 122 (412)
T ss_pred cCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccC-CCceEEEeCCCchHHHHHHHHHHhhh----
Confidence 48999999999999999987665433456899999999999975 433 3 35655 699999999999999986
Q ss_pred CCccccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 77 HDVLVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 77 ~g~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
+|+ .+||+ |+++|||+|.+++|..+
T Consensus 123 tgr---------------~~ii~----------~~~~yHG~t~~als~~~ 147 (412)
T TIGR02407 123 TGR---------------SNVVS----------FTNAFHGMTLGSLSVTG 147 (412)
T ss_pred cCC---------------CeEEE----------ECCCcCCchHHHHHhcC
Confidence 343 27999 99999999999887655
No 50
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.84 E-value=6.6e-21 Score=169.21 Aligned_cols=113 Identities=20% Similarity=0.185 Sum_probs=80.8
Q ss_pred CCCCCcHHHHHHHHHH--HHhcCccCCCCCCChHHHHHHHHHHh----hcCCCCCCcEEEeCChHHHHHHHHHHHHhccc
Q 031493 1 MFRWFQIELARDMGYT--AARFGHVMFPENVYEPALECAELLLQ----GVGKGWASRAYFSDNGSTAIEIALKMAFRKFS 74 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQ--l~~l~~~~~~~~~~~~~~~LAe~L~~----~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~ 74 (158)
.+||+||+|++|+++| .+.+.+. ..+.+++..+||++|.+ ++|.+ +++|+|+||||||||+|||+||+|+.
T Consensus 71 ~lGh~~p~i~~Ai~~q~~~~~l~~~--~~~~~~~~~~la~~l~~~l~~~~p~~-~~~v~f~~SGsEAvE~AlKlAr~~~~ 147 (464)
T TIGR00699 71 PIGYNNPALLKAAQSPEMATTLINR--PALGNFPSKDWAKILKEGILKVAPKG-QDQVWTGMSGSDANELAFKAAFMYYR 147 (464)
T ss_pred cCCCCCHHHHHHHHHHHHHHhhccc--ccCCcHHHHHHHHHHHHhHHhhCCCC-cCEEEEeCCcHHHHHHHHHHHHHHHH
Confidence 4899999999999996 4445443 24678888999999854 67866 89999999999999999999998753
Q ss_pred ccCCcccc--c-cCC------CcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 75 FDHDVLVD--F-LGK------DTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 75 ~~~g~~~~--~-~~~------~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
. +++..+ + .|+ ...++.+..+||+ |+++|||+|.+++|..+.
T Consensus 148 ~-~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~----------~~~syHG~t~~als~t~~ 198 (464)
T TIGR00699 148 S-KQRGYQADFSEEENESCMDNQAPGSPDLSILS----------FKGAFHGRLFGSLSTTRS 198 (464)
T ss_pred h-cCCCcccccccccccccccccccCCcCCEEEE----------ECCCcCCccHHHHHhcCC
Confidence 2 111000 0 000 0011112248999 999999999998887653
No 51
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.84 E-value=1.1e-20 Score=167.52 Aligned_cols=96 Identities=16% Similarity=0.087 Sum_probs=79.3
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCC---CcEEEe-CChHHHHHHHHHHHHhccccc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWA---SRAYFS-DNGSTAIEIALKMAFRKFSFD 76 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l---~~v~f~-~SGSEA~E~AlKlAR~~~~~~ 76 (158)
.+||+||+|++|+++|+++..+.....+.++...+||++|++.+|.+ + ++++|+ ||||||||+|||+||++
T Consensus 76 ~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~-~~~~~~v~f~~~SGSEAve~AlklAr~~---- 150 (464)
T PRK06938 76 ALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEA-FAREAKIQFCGPTGTDAVEAALKLVKTA---- 150 (464)
T ss_pred ccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCccc-ccccceEEEeCCCcHHHHHHHHHHHHHh----
Confidence 48999999999999999864433222578999999999999999865 4 377665 89999999999999986
Q ss_pred CCccccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 77 HDVLVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 77 ~g~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
+|+ .+||+ +.++|||+|.+++|.++
T Consensus 151 tgr---------------~~ii~----------~~~~yHG~t~~als~t~ 175 (464)
T PRK06938 151 TGR---------------STVLS----------FQGGYHGMSQGALSLMG 175 (464)
T ss_pred hCC---------------CeEEE----------ECCccCCccHHHHhhcC
Confidence 343 27999 99999999999888655
No 52
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=1.2e-20 Score=165.74 Aligned_cols=97 Identities=20% Similarity=0.111 Sum_probs=82.6
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+..+..+.++...+|||+|++..|....++++|++|||||||+|+|+||+++ |+
T Consensus 69 ~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~t----gr- 143 (443)
T PRK06058 69 SVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYT----GR- 143 (443)
T ss_pred ccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhh----CC-
Confidence 4899999999999999999876544345788999999999999985424799999999999999999999873 43
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ +.++|||.|.+++|.++
T Consensus 144 --------------~~ii~----------~~~~yHG~t~~al~~~~ 165 (443)
T PRK06058 144 --------------QAVVV----------FDHAYHGRTNLTMALTA 165 (443)
T ss_pred --------------CeEEE----------ECCCcCcChHHHHhhcC
Confidence 27999 99999999999887654
No 53
>PRK12403 putative aminotransferase; Provisional
Probab=99.84 E-value=1.5e-20 Score=166.22 Aligned_cols=103 Identities=16% Similarity=0.071 Sum_probs=85.4
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCC-CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFP-ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDV 79 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~-~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~ 79 (158)
.+||+||+|++|+++|++++.+.+.. ...++...+|+|+|++.+|.. +++|+|+||||||||+|||+||+|+. .+|+
T Consensus 67 ~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseA~e~AiklAr~~~~-~~g~ 144 (460)
T PRK12403 67 NLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGH-YSHAIYTNSGSEANEVLIRTVRRYWQ-VLGK 144 (460)
T ss_pred cCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHHHHHHHHH-hhCC
Confidence 37999999999999999998765421 346889999999999999876 78999999999999999999998742 2343
Q ss_pred cccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 80 LVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 80 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ +.++|||+|++++|.++.
T Consensus 145 --~-~r---------~~ii~----------~~~~yHG~t~~~~s~s~~ 170 (460)
T PRK12403 145 --P-QK---------KIMIG----------RWNGYHGSTLAATALGGM 170 (460)
T ss_pred --C-CC---------cEEEE----------ECCCcCcccHhhhhcCCC
Confidence 1 22 37889 999999999998887663
No 54
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.84 E-value=9.5e-21 Score=165.74 Aligned_cols=92 Identities=14% Similarity=0.118 Sum_probs=80.9
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+. .+.++...+|||+|++.+| + +++|+|+||||||||+|||+||++ +|+
T Consensus 66 ~lGh~~p~v~~ai~~q~~~~~~~---~~~~~~~~~la~~l~~~~p-~-~~~v~f~~sGseA~e~AlklAr~~----tgr- 135 (428)
T PRK12389 66 ITGHAHPHITKAITEAAENGVLY---GTPTELEIEFAKMLKEAIP-S-LEKVRFVNSGTEAVMTTIRVARAY----TGR- 135 (428)
T ss_pred ccCCCCHHHHHHHHHHHHhCCcc---CCCCHHHHHHHHHHHHhCC-C-CcEEEEeCCHHHHHHHHHHHHHHh----hCC-
Confidence 48999999999999999987542 4678999999999999988 4 789999999999999999999987 344
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ |+++|||+|.+++|..+
T Consensus 136 --------------~~ii~----------~~~~yHG~t~~~~~~~~ 157 (428)
T PRK12389 136 --------------TKIIK----------FAGCYHGHSDLVLVAAG 157 (428)
T ss_pred --------------CEEEE----------ECCCcCCChHHHHHhcC
Confidence 27999 99999999999887654
No 55
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.83 E-value=1.8e-20 Score=165.74 Aligned_cols=98 Identities=13% Similarity=0.043 Sum_probs=79.3
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCC--CCcEEEeCChHHHHHHHHHHHHhcccccCC
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGW--ASRAYFSDNGSTAIEIALKMAFRKFSFDHD 78 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~--l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g 78 (158)
.+||+||+|++|+++|+++..+.....+.++...+|||+|++.+|... ...+||+||||||||+|||+||++ +|
T Consensus 71 ~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~----tg 146 (459)
T PRK06931 71 ALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTY----TG 146 (459)
T ss_pred cCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHh----cC
Confidence 489999999999999998744332234678999999999999998531 134677899999999999999987 34
Q ss_pred ccccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 79 VLVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .+||+ |+++|||+|.+++|.++.
T Consensus 147 r---------------~~Ii~----------~~~~yHG~t~~als~t~~ 170 (459)
T PRK06931 147 R---------------SNVIS----------FSGGYHGMTHGALAVTGN 170 (459)
T ss_pred C---------------CeEEE----------ECCCcCCccHHHHhhcCC
Confidence 4 27999 999999999998876553
No 56
>PRK06148 hypothetical protein; Provisional
Probab=99.83 E-value=1.8e-20 Score=179.04 Aligned_cols=94 Identities=18% Similarity=0.172 Sum_probs=82.9
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+. ..+.++...+|||+|++++|.+ +++|+|+||||||||+|||+||++ +|+
T Consensus 635 ~lGH~hp~v~~Ai~~q~~~l~~~--~~~~~~~~~~lAe~L~~~~p~~-~~~v~f~nSGsEA~e~AlklAr~~----tGr- 706 (1013)
T PRK06148 635 HVGHAHPRVVAAAARQAARLNTN--TRYLHDAIVAYAERLTATLPDG-LTVAFFVNSGSEANSLALRLARAH----TGQ- 706 (1013)
T ss_pred hcCCCCHHHHHHHHHHHhhcCCc--CCcCCHHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHHHHHHh----cCC-
Confidence 48999999999999999987543 2578999999999999999976 899999999999999999999987 354
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ +.++|||+|.+++|.++
T Consensus 707 --------------~~ii~----------~~~~YHG~t~~a~s~s~ 728 (1013)
T PRK06148 707 --------------RDAIV----------LDHAYHGTTTELIDLSP 728 (1013)
T ss_pred --------------CeEEE----------EcCCccCCCcchhhcCc
Confidence 27999 99999999999888755
No 57
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.82 E-value=5.3e-20 Score=161.93 Aligned_cols=93 Identities=16% Similarity=0.025 Sum_probs=80.0
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
+|||+||+|++|+++|++++.. ..+.++...+|||+|++.+|.. .++|+|++|||||||+|||+||++ +|+
T Consensus 66 ~lGh~~p~v~~ai~~q~~~~~~---~~~~~~~~~~la~~L~~~~~~~-~~~v~f~~SGsEA~e~AiklAr~~----tgr- 136 (433)
T PRK00615 66 IHGHSHPKICDAIQQGAERGTS---YGLTSEQEILFAEELFSYLGLE-DHKIRFVSSGTEATMTAVRLARGI----TGR- 136 (433)
T ss_pred ccCCCCHHHHHHHHHHHHhCCC---CCCCCHHHHHHHHHHHHhCCCC-cCEEEEeCchHHHHHHHHHHHHHh----hCC-
Confidence 4899999999999999998753 2567899999999999999865 689999999999999999999987 344
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcC---cccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLT---QGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T---~g~~s~~~ 126 (158)
.+||+ |+++|||.| +++++.++
T Consensus 137 --------------~~ii~----------~~~~yHG~td~~~~~~~~~~ 161 (433)
T PRK00615 137 --------------SIIIK----------FLGCYHGHADTLLQGISFSE 161 (433)
T ss_pred --------------CEEEE----------EcCccCCCCcccCcccccCC
Confidence 27999 999999988 67666554
No 58
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.82 E-value=8.2e-20 Score=157.56 Aligned_cols=93 Identities=20% Similarity=0.078 Sum_probs=81.9
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+... .+.+++..+|+++|++..+ +++++|+||||||||+|+|+||.+ +|+
T Consensus 37 ~lGh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~la~~l~~~~~---~~~v~~~~SGseA~e~Alklar~~----~gr- 107 (364)
T PRK04013 37 VLGHNHPEWVEEMSEQLEKLVVAGP-MFEHEEKEEMLEELSKWVN---YEYVYMGNSGTEAVEAALKFARLY----TGR- 107 (364)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCccC-CcCCHHHHHHHHHHHhhcC---CCEEEEeCchHHHHHHHHHHHHHH----hCC-
Confidence 4899999999999999999887653 6789999999999999874 689999999999999999999986 343
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ +.++|||+|.++++..+
T Consensus 108 --------------~~Ii~----------~~~syHG~t~~~ls~~~ 129 (364)
T PRK04013 108 --------------KEIIA----------MTNAFHGRTMGALSATW 129 (364)
T ss_pred --------------CEEEE----------ECCccccCchhhccCCC
Confidence 27999 99999999999888655
No 59
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.81 E-value=8.9e-20 Score=159.78 Aligned_cols=102 Identities=25% Similarity=0.286 Sum_probs=86.2
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+..+..+.++...+|+++|++++|.+ +++|+|++|||||||+|+|+||.++.. +|+
T Consensus 58 ~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~v~f~~sGseA~e~AlklAr~~~~~-~~~- 134 (427)
T TIGR00508 58 IHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNA-LDCVFLADSGSVAVEVALKMALQYWQA-KGE- 134 (427)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCC-CCEEEEeCCcHHHHHHHHHHHHHHHHh-hCC-
Confidence 47999999999999999998876544568899999999999999877 899999999999999999999987532 232
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
+ .| .+||+ |.++|||.|.++++..+
T Consensus 135 -~-~r---------~~il~----------~~~~yHG~t~~~~s~~~ 159 (427)
T TIGR00508 135 -K-NR---------QKFLT----------IRSGYHGDTFGAMSVCD 159 (427)
T ss_pred -C-Cc---------cEEEE----------EcCCcCCccHhhhcccC
Confidence 1 12 37999 99999999999887655
No 60
>PLN02624 ornithine-delta-aminotransferase
Probab=99.80 E-value=3.2e-19 Score=158.18 Aligned_cols=102 Identities=14% Similarity=-0.036 Sum_probs=84.1
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.+. .+.+++..+|+|+|+++.| +++++|+||||||||+|||+||+++...+|.
T Consensus 88 ~~Gh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~la~~L~~~~~---~~~~~f~~SGseA~e~AlklAr~~~~~~~g~- 162 (474)
T PLN02624 88 NQGHCHPKIIKALTEQAEKLTLSSR-AFYNDKFPEFAEYLTSMFG---YDMVLPMNTGAEGVETAIKLARKWGYEKKGI- 162 (474)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCccc-ccCCHHHHHHHHHHHhhcC---CCeEEEeCChHHHHHHHHHHHHHHHHhhcCC-
Confidence 3799999999999999999887653 5788999999999999875 6799999999999999999999874432332
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+..+ .+||+ +.++|||+|.+++|..+.
T Consensus 163 -~~~~---------~~ii~----------~~~~yHG~t~~~~s~~~~ 189 (474)
T PLN02624 163 -PKNE---------AIIVS----------CCGCFHGRTLAAISMSCD 189 (474)
T ss_pred -CCCC---------cEEEE----------ECCCcCCCCHHHhhcCCC
Confidence 1012 37999 999999999998876553
No 61
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.79 E-value=3.6e-19 Score=154.16 Aligned_cols=100 Identities=24% Similarity=0.196 Sum_probs=82.5
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.|||+||+|++|+++|++++.+.. ..+.+++..+|+++|+++.+ .++|+|++|||||||+|+|+||+++.+ ++.
T Consensus 52 ~lGh~~p~v~~A~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~---~~~v~~~~sGseA~e~Alk~ar~~~~~-~~~- 125 (406)
T PRK12381 52 ALGHAHPALREALNEQASKFWHTG-NGYTNEPVLRLAKKLIDATF---ADRVFFCNSGAEANEAALKLARKYAHD-RYG- 125 (406)
T ss_pred cCCCCCHHHHHHHHHHHhhccccc-CccCCHHHHHHHHHHHhhCC---CCeEEEcCCcHHHHHHHHHHHHHHHhh-cCC-
Confidence 489999999999999999876654 35678889999999999875 579999999999999999999987532 222
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ +.++|||+|.++++.++.
T Consensus 126 -~-~r---------~~ii~----------~~~~yHG~t~~~~~~~~~ 151 (406)
T PRK12381 126 -S-HK---------SGIVA----------FKNAFHGRTLFTVSAGGQ 151 (406)
T ss_pred -C-CC---------CeEEE----------ECCCcCCcchhHHhhcCC
Confidence 1 22 37999 999999999998776553
No 62
>PRK07046 aminotransferase; Validated
Probab=99.79 E-value=5.9e-19 Score=155.98 Aligned_cols=87 Identities=20% Similarity=0.042 Sum_probs=75.6
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
++||+||+|++|+++|+++..+. .+.++..++|||+|+++.| +++|+|+||||||||+|+|+||.+ +|+
T Consensus 88 ~lGh~~p~i~~Av~~q~~~~~~~---~~~~~~~~~lAe~l~~~~~---~~~v~F~nSGtEA~e~AlrlAR~~----TGr- 156 (453)
T PRK07046 88 MFGHSPAPVARALAEQARRGLTT---MLPSEDAAWVGEELARRFG---LPYWQVATTATDANRFVLRWARAV----TGR- 156 (453)
T ss_pred ccCCCCHHHHHHHHHHHHhCCCC---CCCCHHHHHHHHHHHHHhC---CCEEEEECCHHHHHHHHHHHHHHh----hCC-
Confidence 58999999999999999987542 4678999999999999875 789999999999999999999987 354
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccc
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFC 122 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~ 122 (158)
.+||+ |.++|||.+.+++
T Consensus 157 --------------~~ii~----------~~g~YHG~~d~~l 174 (453)
T PRK07046 157 --------------PKILV----------FNGCYHGTVDDVF 174 (453)
T ss_pred --------------CEEEE----------ECCCCCCCcHHhH
Confidence 27999 9999999975543
No 63
>PRK06149 hypothetical protein; Provisional
Probab=99.79 E-value=3e-19 Score=170.00 Aligned_cols=94 Identities=15% Similarity=0.085 Sum_probs=81.8
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.+ .+.++...+|+|+|++++|.+ +++|+|+||||||||+|||+||+++ |+
T Consensus 596 ~lGh~hp~v~~Ai~~q~~~l~~~~--~~~~~~~~elae~L~~~~p~~-~~~v~f~~SGsEA~e~AlklAr~~t----gr- 667 (972)
T PRK06149 596 VLGHGHPRLAAAAARQWSLLNTNS--RFHYAAVAEFSERLAALAPDG-LDTVFLVNSGSEANDLAIRLAWAAS----GR- 667 (972)
T ss_pred ccCCCCHHHHHHHHHHHHhccccc--cccCHHHHHHHHHHHHhCCCC-cCEEEEeCCchHHHHHHHHHHHHhc----CC-
Confidence 389999999999999999886542 467889999999999999877 8999999999999999999999873 43
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ +.++|||+|+|++|..+
T Consensus 668 --------------~~ii~----------~~~~yHG~t~ga~~~s~ 689 (972)
T PRK06149 668 --------------RDVVS----------VLEAYHGWTVATDAVST 689 (972)
T ss_pred --------------CeEEE----------EeCCCCCcChhHhhhcC
Confidence 27999 99999999999766543
No 64
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.78 E-value=7.8e-19 Score=151.18 Aligned_cols=101 Identities=14% Similarity=-0.040 Sum_probs=82.1
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.+. .+.+++..+|+|+|+++.| .++++|++|||||||+|||+||+++...+|.
T Consensus 53 ~lGh~~p~v~~ai~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~- 127 (396)
T PRK04073 53 NQGHRHPKIIQALKDQADKVTLTSR-AFHSDQLGPWYEKVAKLTG---KDMVLPMNTGAEAVETAIKAARRWAYDVKGV- 127 (396)
T ss_pred cCCCCCHHHHHHHHHHHhhcccccc-ccCCHHHHHHHHHHHhcCC---CCeEEEcCChHHHHHHHHHHHHHHhhhccCC-
Confidence 4899999999999999999877543 5678889999999999875 5799999999999999999999874332232
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
+..| .+||+ +.++|||+|.++++..+
T Consensus 128 -~~~r---------~~ii~----------~~~~~HG~~~~~~~~~~ 153 (396)
T PRK04073 128 -EPNK---------AEIIA----------CEGNFHGRTMAAVSLSS 153 (396)
T ss_pred -CCCC---------CEEEE----------ECCCcCCCCHHHHhhcC
Confidence 0022 27999 99999999998776554
No 65
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.78 E-value=6.8e-19 Score=156.64 Aligned_cols=86 Identities=15% Similarity=0.061 Sum_probs=75.2
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
++||+||+|++|+++|++++... ...++...+|||+|++.+| + +++|+|+||||||||+|||+||+++ |+
T Consensus 112 ~lGh~~p~v~~av~~ql~~~~~~---~~~~~~~~~lAe~l~~~~p-~-~~~v~f~~SGsEA~e~AlklAR~~t----gr- 181 (474)
T PLN02482 112 IIGHADDEVLAALAETMKKGTSF---GAPCLLENVLAEMVIDAVP-S-VEMVRFVNSGTEACMGVLRLARAYT----GR- 181 (474)
T ss_pred ccCCCCHHHHHHHHHHHhhCCCC---CCCCHHHHHHHHHHHHhCC-C-CCEEEEeCChHHHHHHHHHHHHHhc----CC-
Confidence 48999999999999999987643 4578899999999999998 4 7899999999999999999999873 44
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcc
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQG 120 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g 120 (158)
.+||+ |.++|||.|..
T Consensus 182 --------------~~Ii~----------~~g~YHG~~~~ 197 (474)
T PLN02482 182 --------------EKIIK----------FEGCYHGHADS 197 (474)
T ss_pred --------------CEEEE----------ECCccCCCcch
Confidence 27999 99999997743
No 66
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.78 E-value=8.1e-19 Score=151.60 Aligned_cols=99 Identities=25% Similarity=0.218 Sum_probs=81.6
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.. ..+.++...+|+|+|++..+ .++++|++|||||||+|||+||+++..+.+.
T Consensus 48 ~lGh~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~L~~~~~---~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~- 122 (397)
T TIGR03246 48 ALGHAHPELVKALIEQADKLWHIG-NGYTNEPVLRLAKKLVDATF---ADKVFFCNSGAEANEAALKLARRYALDKHGA- 122 (397)
T ss_pred cCCCCCHHHHHHHHHHHHhccccc-CccCCHHHHHHHHHHHhhCC---CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC-
Confidence 489999999999999999876554 25678889999999999875 4699999999999999999999875432111
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.| .+||+ +.++|||+|.++++.++
T Consensus 123 ---~r---------~~ii~----------~~~~yHG~~~~~~~~~~ 146 (397)
T TIGR03246 123 ---DK---------SEIVA----------FKNSFHGRTLFTVSVGG 146 (397)
T ss_pred ---CC---------CEEEE----------ECCCcCCccHHHHHhcC
Confidence 22 37999 99999999998777655
No 67
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.77 E-value=1.9e-18 Score=149.95 Aligned_cols=99 Identities=19% Similarity=0.180 Sum_probs=81.4
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.. ..+.+++..+||++|.+..+ .++++|++|||||||+|+|+||+++.+ ++
T Consensus 49 ~lGh~~p~v~~a~~~q~~~~~~~~-~~~~~~~~~~la~~l~~~~~---~~~v~f~~SGseA~e~Aik~ar~~~~~--~~- 121 (395)
T PRK03715 49 CLGHCNPGMVEALAAQAEKLINPS-PAFYNEPMAKLAGLLTQHSC---FDKVFFANSGAEANEGAIKLARKWGRK--HK- 121 (395)
T ss_pred cCCCCCHHHHHHHHHHHHhccccc-ccccCHHHHHHHHHHhhccC---CCEEEEeCCcHHHHHHHHHHHHHHhhc--cC-
Confidence 489999999999999999887654 25678899999999998753 689999999999999999999986421 11
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||+ ++++|||+|.++++..+.
T Consensus 122 -~-~r---------~~ii~----------~~~~yHG~t~~~~~~s~~ 147 (395)
T PRK03715 122 -N-GA---------YEIIT----------FDHSFHGRTLATMSASGK 147 (395)
T ss_pred -C-CC---------cEEEE----------ECCCcCCChHHHHhhcCC
Confidence 1 22 37999 999999999998877653
No 68
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.74 E-value=8.1e-18 Score=146.65 Aligned_cols=97 Identities=22% Similarity=0.208 Sum_probs=81.2
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+..+..+.++...+||++|++..|.+..++++|++|||||||.|+|+||.++ ++
T Consensus 54 ~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~----~r- 128 (425)
T PRK08088 54 NTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAAT----KR- 128 (425)
T ss_pred CCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHh----CC-
Confidence 3799999999999999999876544345688899999999998876522699999999999999999999863 33
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ +.++|||.|.++.+..+
T Consensus 129 --------------~~iv~----------~~~~yHG~~~~~~~~~~ 150 (425)
T PRK08088 129 --------------SGVIA----------FTGAYHGRTHYTLALTG 150 (425)
T ss_pred --------------CeEEE----------ECCccCCccHHHHHhhC
Confidence 26999 99999999999777554
No 69
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.74 E-value=1.1e-17 Score=146.80 Aligned_cols=85 Identities=20% Similarity=0.158 Sum_probs=74.7
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
+|||+||.|++|+++|+++-.. .+.+++..+++||.|++..| . +++|.|+||||||+..|||+||.++ ||
T Consensus 66 ilGH~~p~V~~Av~~~l~~G~~---fg~Pte~Ei~~Aell~~~~p-~-~e~vrfvnSGTEAtmsAiRlARa~T----gR- 135 (432)
T COG0001 66 ILGHAHPAVVEAVQEQLERGLS---FGAPTELEVELAELLIERVP-S-IEKVRFVNSGTEATMSAIRLARAYT----GR- 135 (432)
T ss_pred ccCCCCHHHHHHHHHHHHhcCC---CCCCCHHHHHHHHHHHHhcC-c-ccEEEEecchhHHHHHHHHHHHHhh----CC-
Confidence 6999999999999999988543 25689999999999999998 3 6899999999999999999999984 54
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCc
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQ 119 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~ 119 (158)
+ |||. |.|+|||..-
T Consensus 136 ------~--------kIik----------F~G~YHG~~D 150 (432)
T COG0001 136 ------D--------KIIK----------FEGCYHGHSD 150 (432)
T ss_pred ------C--------eEEE----------EcCCCCCCcc
Confidence 2 7999 9999999654
No 70
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=5.6e-18 Score=144.62 Aligned_cols=101 Identities=17% Similarity=0.071 Sum_probs=86.0
Q ss_pred CCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcccc
Q 031493 3 RWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVLVD 82 (158)
Q Consensus 3 Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~~~ 82 (158)
|||||.|++|+.+|+++|...+ -.|.++...+++|.+.++++ +++|.-+|+|.||+|.|+||||++.++.++. |
T Consensus 74 Ghchpki~~aLqeq~~kLtlss-rafYnd~~~~f~~~vt~lf~---~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~i--p 147 (427)
T KOG1402|consen 74 GHCHPKIIKALQEQADKLTLSS-RAFYNDVLGEFAEYVTKLFG---YDKVLPMNTGAEAVETACKLARKWGYRKKNI--P 147 (427)
T ss_pred CCCCHHHHHHHHHHHhHhhhhh-HHHhhhhHHHHHHHHHHhcC---cceeeecccchhHHHHHHHHHHHHHHhhccC--C
Confidence 9999999999999999987665 36788999999999999986 7899999999999999999999986655554 2
Q ss_pred ccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCCc
Q 031493 83 FLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGTL 128 (158)
Q Consensus 83 ~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~~ 128 (158)
+++ .+||+ -.|.|||||+|+.|.++..
T Consensus 148 --~nk-------a~il~----------~~~nFhGrT~~ais~s~d~ 174 (427)
T KOG1402|consen 148 --KNK-------AKILS----------AENNFHGRTLGAISLSTDP 174 (427)
T ss_pred --ccc-------eeEEE----------ecccccCceeeeEEecCCc
Confidence 222 58999 9999999999987766543
No 71
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=2e-18 Score=148.53 Aligned_cols=127 Identities=23% Similarity=0.167 Sum_probs=95.9
Q ss_pred CCCCcHHHHHHHHH-HHHhcCccCC---CCCC-ChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhccccc
Q 031493 2 FRWFQIELARDMGY-TAARFGHVMF---PENV-YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFD 76 (158)
Q Consensus 2 ~Gh~hP~Iv~Av~e-Ql~~l~~~~~---~~~~-~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~ 76 (158)
+|||||.+++++.+ |.-+. .++. ..|+ .+....|-+.|+.++|.+ ++.|+++-+||.|||+|+|.|+.||...
T Consensus 90 lGYn~P~LvK~a~~p~~~~~-lvnRPALg~fP~kd~~~~l~~~ll~~APKG-~~~v~tm~cGs~aNEnA~K~afiwy~~k 167 (484)
T KOG1405|consen 90 LGYNNPALVKAAQQPQNATM-LVNRPALGNFPPKDFAEKLRQSLLSIAPKG-QKQVITMLCGSCANENAYKTAFIWYRAK 167 (484)
T ss_pred cCCCCHHHHHHhcChHHHHH-HhccccccCCChhhHHHHHHHHHHhhCcch-HHHHHHHhccccccHHHHHHHHHHHHhh
Confidence 69999999999865 33221 1221 2344 344555667788889988 9999999999999999999999887643
Q ss_pred -CCccccccCCC-------cccccccceeEecccccccccCCCCCcCCcCcccccC------CCCcccccccccccccc
Q 031493 77 -HDVLVDFLGKD-------TTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSN------HGTLEEAFFWTLLQFSC 141 (158)
Q Consensus 77 -~g~~~~~~~~~-------~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~------~~~~~~~~~~~~~~~~~ 141 (158)
+|. .+++.++ ++||+|++.|++ |+++|||||+|++|. |....++|+||++.|.-
T Consensus 168 ~rg~-~~~s~~e~eScm~n~aPg~P~lsvls----------F~gaFHGR~~g~lstT~SKpIHKldiPaFdWPiA~fP~ 235 (484)
T KOG1405|consen 168 ERGQ-AGFSAEELESCMINQAPGAPDLSVLS----------FKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPIAPFPR 235 (484)
T ss_pred cCCC-CCCCHHHHHHHHhcCCCCCCceeeee----------eccccccccccccccccCccccccCCCCCCCCCCCCcc
Confidence 442 3445433 899999999999 999999999997774 23456789999988764
No 72
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.72 E-value=2.3e-17 Score=142.33 Aligned_cols=99 Identities=23% Similarity=0.220 Sum_probs=79.9
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
++||+||+|++|+.+|+++..+... .+.+++..+|+++|++..+ .++++|++|||||||+|+|+||+++...++.
T Consensus 53 ~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~~~~~~~~sGseA~e~a~klar~~~~~~~~~- 127 (403)
T PRK05093 53 ALGHCHPALVKALKEQGEKLWHISN-VFTNEPALRLAKKLIDATF---AERVFFANSGAEANEAAFKLARRYACDRHGP- 127 (403)
T ss_pred cCCCCCHHHHHHHHHHHHhcCcccC-ccCCHHHHHHHHHHHhhCC---CCEEEEeCchHHHHHHHHHHHHHHHhhcCCC-
Confidence 4899999999999999988665432 3567888999999999864 5799999999999999999999875432221
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+ .+||+ +.++|||+|.++++..+
T Consensus 128 ---~~---------~~ii~----------~~~~~HG~~~~~~~~~~ 151 (403)
T PRK05093 128 ---EK---------TEIIA----------FHNSFHGRTLFTVSVGG 151 (403)
T ss_pred ---CC---------CeEEE----------EcCCcCCchhhhHhhcC
Confidence 22 37999 99999999998766543
No 73
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.69 E-value=1.9e-16 Score=138.42 Aligned_cols=90 Identities=17% Similarity=0.062 Sum_probs=76.1
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|+++.. . ..+.++...+|+++|+++.| + +++|+|++|||||||+|+|+||.+. |+
T Consensus 63 ~lGh~~p~i~~a~~~~~~~~~--~-~~~~~~~~~~la~~L~~~~~-~-~~~v~~~~sGseA~e~Aik~a~~~~----g~- 132 (426)
T PRK00062 63 ILGHAHPEVVEAVIEAAEKGL--S-FGAPTELEVELAELVIELVP-S-IEMVRMVNSGTEATMSAIRLARGYT----GR- 132 (426)
T ss_pred hcCCCCHHHHHHHHHHHHhCC--c-CCCCCHHHHHHHHHHHHhCC-C-CCEEEEecCHHHHHHHHHHHHHHHh----CC-
Confidence 389999999999999998843 2 24578888999999999887 4 6899999999999999999999862 33
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSN 124 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~ 124 (158)
.+||+ |.++|||.|.++.+.
T Consensus 133 --------------~~ii~----------~~~~yHG~t~~~~~~ 152 (426)
T PRK00062 133 --------------DKIIK----------FEGCYHGHADSLLVK 152 (426)
T ss_pred --------------CeEEE----------EcCccCCchhhhhhc
Confidence 26999 999999999775554
No 74
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.68 E-value=1.5e-16 Score=136.21 Aligned_cols=100 Identities=19% Similarity=0.151 Sum_probs=81.7
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+... .+.++...+|+|+|++..+ .++|+|++|||||||+|+|+||+++.. .|.
T Consensus 44 ~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~---~~~v~~~~sGseA~~~al~~ar~~~~~-~G~- 117 (389)
T PRK01278 44 SLGHAHPHLVEALKEQAEKLWHVSN-LYRIPEQERLAERLVENSF---ADKVFFTNSGAEAVECAIKTARRYHYG-KGH- 117 (389)
T ss_pred cCCCCCHHHHHHHHHHHHhcCcccc-ccCChHHHHHHHHHHhhCC---CCEEEEcCCcHHHHHHHHHHHHHHHHh-cCC-
Confidence 4899999999999999998776542 4678889999999999875 579999999999999999999986432 332
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHGT 127 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~~ 127 (158)
+ .| .+||. +.++|||.|.++++..+.
T Consensus 118 -~-~r---------~~vi~----------~~~~yhg~~~~~~~~~~~ 143 (389)
T PRK01278 118 -P-ER---------YRIIT----------FEGAFHGRTLATIAAGGQ 143 (389)
T ss_pred -C-CC---------CEEEE----------ECCCcCCCcHHHHhccCC
Confidence 1 22 37999 999999999987766543
No 75
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.68 E-value=2.2e-16 Score=136.81 Aligned_cols=89 Identities=13% Similarity=0.056 Sum_probs=75.7
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
++||+||+|++|+++|++++.+ ..+.++...+|+|+|++..|. .++|+|++|||||||+|+|+||.++ |+
T Consensus 61 ~lGh~~p~v~~ai~~q~~~~~~---~~~~~~~~~~lae~l~~~~~~--~~~v~~~~sGseA~e~Alk~ar~~~----gr- 130 (423)
T TIGR00713 61 ILGHAHPRVVEAVKEALERGTS---YGAPTEAEILLAKEIISRVPS--VEMVRFVNSGTEATMSAVRLARGYT----GR- 130 (423)
T ss_pred ccCCCCHHHHHHHHHHHHhCCc---CCCCCHHHHHHHHHHHHhCCc--ccEEEEeCCHHHHHHHHHHHHHHhh----CC-
Confidence 4899999999999999998653 245788899999999999874 4799999999999999999999873 43
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCccccc
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCS 123 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s 123 (158)
.+||+ +.++|||.|.+..+
T Consensus 131 --------------~~ii~----------~~~~yhG~~~~~~~ 149 (423)
T TIGR00713 131 --------------DKIIK----------FEGCYHGHHDALLV 149 (423)
T ss_pred --------------CEEEE----------EcCCCCCChhhhhc
Confidence 27999 99999999876544
No 76
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.67 E-value=2.1e-16 Score=138.62 Aligned_cols=67 Identities=19% Similarity=0.138 Sum_probs=57.9
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRK 72 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~ 72 (158)
.+||+||+|++|+++|++++... ...++...+|||+|++++| + .++|+|+||||||||+|+|+||++
T Consensus 61 ~lGh~~p~v~~Ai~~q~~~~~~~---~~~~~~~~~la~~l~~~~p-~-~~~v~f~~sGseA~e~AlklAr~~ 127 (431)
T PRK06209 61 GLGHAYPPVVEAVREALQDGCNF---TRPSAIELDAAESFLELID-G-ADMVKFCKNGSDATSAAVRLARAY 127 (431)
T ss_pred hcCCCCHHHHHHHHHHHHhCcCC---CCCCHHHHHHHHHHHHhCC-c-cceEEEecCHHHHHHHHHHHHHHH
Confidence 48999999999999999987532 3345566789999999987 3 689999999999999999999987
No 77
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.67 E-value=3.1e-16 Score=135.12 Aligned_cols=100 Identities=16% Similarity=0.034 Sum_probs=80.7
Q ss_pred CCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCccc
Q 031493 2 FRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVLV 81 (158)
Q Consensus 2 ~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~~ 81 (158)
+||+||+|++|+++|++++.+... .+.++...+|+++|++..+ .++++|++||+||||+|||+||.++.+.+|.
T Consensus 51 ~Gh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~-- 124 (401)
T TIGR01885 51 QGHCHPKIVKALTEQAQKLTLSSR-AFYNDVFGEFAEYVTKLFG---YDKVLPMNTGAEAVETAIKLARKWGYKVKGI-- 124 (401)
T ss_pred CCCCCHHHHHHHHHHHHhcccccc-ccCCHHHHHHHHHHHhhcC---CCEEEEeCccHHHHHHHHHHHHHHhhhhcCC--
Confidence 799999999999999998776542 3467888999999999875 5799999999999999999999875432221
Q ss_pred cccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 82 DFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 82 ~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
. .++ .+|++ ++++|||+|.++++..+
T Consensus 125 ~-~~~--------~~i~~----------~~~~yhg~~~~~~~~~~ 150 (401)
T TIGR01885 125 P-ENQ--------AIIVS----------AKGNFHGRTLGAISMST 150 (401)
T ss_pred C-CCC--------CEEEE----------ECCCcCcccHHHHhCcC
Confidence 1 111 37999 99999999999777654
No 78
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.65 E-value=5e-16 Score=133.32 Aligned_cols=100 Identities=14% Similarity=-0.044 Sum_probs=79.9
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+... .+.++...+|+++|++..+ .++++|++||+||||+|||+||.++...+|.
T Consensus 54 ~~Gh~~~~i~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~- 128 (401)
T PRK00854 54 NQGHCHPKILAAMVEQAGRLTLTSR-AFRNDQLAPLYEELAALTG---SHKVLPMNSGAEAVETAIKAVRKWGYEVKGV- 128 (401)
T ss_pred cCCCCCHHHHHHHHHHHhhcccccc-ccCCHHHHHHHHHHHhhCC---CCEEEEeCCcHHHHHHHHHHHHHHHHhccCC-
Confidence 3799999999999999999876542 4678889999999999875 4699999999999999999999864322232
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNH 125 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~ 125 (158)
+..| .+||+ +.++|||+|.+.++..
T Consensus 129 -~~~~---------~~vi~----------~~~~~HG~~~~~~~~~ 153 (401)
T PRK00854 129 -PEGQ---------AEIIV----------CADNFHGRTLSIVGFS 153 (401)
T ss_pred -CCCC---------ceEEE----------ECCCcCCccHHHHhcc
Confidence 1112 27999 9999999998866543
No 79
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.64 E-value=4.8e-16 Score=132.00 Aligned_cols=87 Identities=18% Similarity=0.188 Sum_probs=75.7
Q ss_pred CCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcccc
Q 031493 3 RWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVLVD 82 (158)
Q Consensus 3 Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~~~ 82 (158)
||+||+|++|+..|+..+... ..|.++...+.|++|...+|+ ++.+||+|||||||+.|+||||.++ +.
T Consensus 60 ghchp~VV~A~~kQmat~~tN--~RFlhd~lv~cA~~l~stlPe--Lsvc~F~NSGSEANDLALRLAR~ft----kh--- 128 (452)
T KOG1403|consen 60 GHCHPEVVRAGAKQMATISTN--NRFLHDELVQCARTLTSTLPE--LSVCFFVNSGSEANDLALRLARNFT----KH--- 128 (452)
T ss_pred ccCCHHHHHHHHHHHhHhccc--chhhHHHHHHHHHHHhhcCCC--ceEEEEecCCchhhHHHHHHHHhhc----cc---
Confidence 999999999999999887654 378899999999999999984 8999999999999999999999984 22
Q ss_pred ccCCCcccccccceeEecccccccccCCCCCcCCcCcccc
Q 031493 83 FLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFC 122 (158)
Q Consensus 83 ~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~ 122 (158)
..+|. ...+|||.-...+
T Consensus 129 ------------qDvIt----------ldHAYHGHl~s~m 146 (452)
T KOG1403|consen 129 ------------QDVIT----------LDHAYHGHLQSVM 146 (452)
T ss_pred ------------CceEE----------Eechhccceeeee
Confidence 25888 9999999766544
No 80
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.61 E-value=3.2e-15 Score=127.90 Aligned_cols=101 Identities=14% Similarity=-0.032 Sum_probs=76.3
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.+. .+.++...++.++|.++. + .++++|++|||||||+|||++|++....+|.
T Consensus 44 ~~Gh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~--~-~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~- 118 (400)
T PTZ00125 44 NQGHCHPKILAALINQAQKLTLTSR-AFYNDVLGLAEKYITDLF--G-YDKVLPMNSGAEAGETALKFARKWGYEVKGI- 118 (400)
T ss_pred cCCcCCHHHHHHHHHHHHhcccccc-cccCHHHHHHHHHHHhCC--C-CCEEEEeCCcHHHHHHHHHHHHHHHHhccCC-
Confidence 3899999999999999998876542 345666666666666653 3 6899999999999999999999764322222
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
+..+ .+||+ +.++|||++.+.++..+
T Consensus 119 -~~~~---------~~vl~----------~~~~~Hg~~~~~~~~~~ 144 (400)
T PTZ00125 119 -PENQ---------AKIIF----------CNGNFSGRTIGACSAST 144 (400)
T ss_pred -CCCC---------CeEEE----------ECCCcCCccHHHHhhcC
Confidence 1012 37999 99999999998776543
No 81
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.58 E-value=8.8e-15 Score=124.50 Aligned_cols=93 Identities=22% Similarity=0.203 Sum_probs=77.1
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|++++.+.+ ..+.++...+|+++|.+..| .++++|++||+||||+|+|+||.+. |+
T Consensus 42 ~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~---~~~~~~~~sG~~a~~~A~~~a~~~~----g~- 112 (377)
T PRK02936 42 NLGHCHPTVTKAVQEQLDDIWHVS-NLFTNSLQEEVASLLAENSA---GDLVFFCNSGAEANEAALKLARKHT----GK- 112 (377)
T ss_pred cCCCCCHHHHHHHHHHHHhccccc-cccCCHHHHHHHHHHHhcCC---CCEEEEeCCcHHHHHHHHHHHHHhc----CC-
Confidence 389999999999999999875543 24567888999999998765 4689999999999999999999762 33
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ +.++|||.|.++++..+
T Consensus 113 --------------~~vi~----------~~~~~Hg~~~~~~~~~~ 134 (377)
T PRK02936 113 --------------SKIVT----------FEQSFHGRTFGTMSATG 134 (377)
T ss_pred --------------CeEEE----------ECCCcCCCcHHhhhccC
Confidence 26999 99999999998776544
No 82
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.46 E-value=5e-13 Score=114.66 Aligned_cols=94 Identities=24% Similarity=0.244 Sum_probs=77.7
Q ss_pred CCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCccc
Q 031493 2 FRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVLV 81 (158)
Q Consensus 2 ~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~~ 81 (158)
|||+||+|++|+++|+++..+.. ..+.++...+|+++|++..+....++++|++||+||||+|+|+++.. |+
T Consensus 57 lG~~~p~v~~ai~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~-----g~-- 128 (398)
T PRK03244 57 LGHAHPAVVEAVTRQLATLGHVS-NLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLT-----GR-- 128 (398)
T ss_pred CCCCCHHHHHHHHHHHHhccCcc-CccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHH-----CC--
Confidence 79999999999999999876543 35678888999999999876322479999999999999999999963 32
Q ss_pred cccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 82 DFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 82 ~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||. +.++|||.|.++++..+
T Consensus 129 -------------~~ii~----------~~~~yhg~~~~~~~~~~ 150 (398)
T PRK03244 129 -------------TKIVA----------AEGGFHGRTMGALALTG 150 (398)
T ss_pred -------------CeEEE----------ECCCcCCccHHHHhccC
Confidence 16888 88999999988776554
No 83
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.42 E-value=7.6e-13 Score=113.01 Aligned_cols=91 Identities=20% Similarity=0.199 Sum_probs=71.5
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.||| ||+|++|+.+|++++.+.. ..+.++...+++++|... . ..+++|++|||||||+|+|+||++. ++
T Consensus 42 ~lG~-~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~---~-~~~~~~~~SGseA~~~Al~~ar~~~----~~- 110 (375)
T PRK04260 42 NLGF-HPQVQQALQKQAGLIWHSP-NLYLNSLQEEVAQKLIGD---K-DYLAFFCNSGAEANEAAIKIARKAT----GK- 110 (375)
T ss_pred cCCC-CHHHHHHHHHHHHhcCccc-CccCCHHHHHHHHHHhcC---c-CCEEEEcCccHHHHHHHHHHHHHhc----CC-
Confidence 3899 9999999999998865433 245577778888888652 2 3478999999999999999999762 32
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNHG 126 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~~ 126 (158)
.+||+ +.++|||.+.+.++..+
T Consensus 111 --------------~~vv~----------~~~~yHg~~~~~~~~~~ 132 (375)
T PRK04260 111 --------------QEIIT----------FQNSFHGRTFGSMSATG 132 (375)
T ss_pred --------------CeEEE----------ECCCcCcccHHHHhccC
Confidence 26999 99999999988766544
No 84
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.42 E-value=8.9e-13 Score=112.61 Aligned_cols=94 Identities=28% Similarity=0.278 Sum_probs=77.0
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|++|+++|+++..+.......++...+++++|++..|.+ .++++|++||+|||++|++++|.+. ++
T Consensus 49 ~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~sgsea~~~al~~~~~~~----~~- 122 (413)
T cd00610 49 NLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEG-LDKVFFVNSGTEAVEAALKLARAYT----GR- 122 (413)
T ss_pred ccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCC-CCEEEEcCcHHHHHHHHHHHHHHHc----CC-
Confidence 37999999999999999877654322235788899999999998755 7899999999999999999999753 22
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSN 124 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~ 124 (158)
.+||. +.++|||.+.+.++.
T Consensus 123 --------------~~ii~----------~~~~yhg~~~~~~~~ 142 (413)
T cd00610 123 --------------KKIIS----------FEGAYHGRTLGALSL 142 (413)
T ss_pred --------------CeEEE----------ECCCcCCccHHHHHh
Confidence 16898 999999999875544
No 85
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.39 E-value=1.8e-12 Score=110.57 Aligned_cols=97 Identities=22% Similarity=0.179 Sum_probs=77.4
Q ss_pred CCCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCcc
Q 031493 1 MFRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVL 80 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~ 80 (158)
.+||+||+|.+|+++|+++..+.. ..+.++...+|+++|.+.. + .++++|++||+||+|+|+|+||.+..+ .+.
T Consensus 52 ~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~--~-~~~v~~~~gg~eA~~~al~~a~~~~~~-~~~- 125 (396)
T PRK02627 52 NLGHCHPKLVEAIQEQAAKLIHTS-NLYYIEPQEELAEKLVELS--G-MDKVFFCNSGAEANEAAIKLARKYGHK-KGI- 125 (396)
T ss_pred cCCCCCHHHHHHHHHHHhhccccc-cccCCHHHHHHHHHHHhhc--C-CCEEEECCCcHHHHHHHHHHHHHHhcc-cCC-
Confidence 379999999999999998876543 2456888999999999985 3 689999999999999999999986421 111
Q ss_pred ccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccCC
Q 031493 81 VDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSNH 125 (158)
Q Consensus 81 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~~ 125 (158)
.+ .+|+. +.++|||.+.+.++..
T Consensus 126 ---~~---------~~ii~----------~~~~yhg~~~~~~~~~ 148 (396)
T PRK02627 126 ---EK---------PEIIT----------AENSFHGRTLATLSAT 148 (396)
T ss_pred ---CC---------CeEEE----------ECCCcCcccHHHHHhc
Confidence 11 26999 9999999998866544
No 86
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=98.97 E-value=2.8e-09 Score=90.22 Aligned_cols=94 Identities=27% Similarity=0.260 Sum_probs=73.8
Q ss_pred CCCCcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcccccCCccc
Q 031493 2 FRWFQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHDVLV 81 (158)
Q Consensus 2 ~Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~~g~~~ 81 (158)
+||+||.|.+++.+++++..+.. ..+.++...+|+++|.+..+ .+++++++||+||++.|++++|.+..+ .|.
T Consensus 41 lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~la~~~g---~~~~~~~~sg~~a~~~a~~~~~~~~~~-~~~-- 113 (379)
T TIGR00707 41 LGHAHPKLVEALKEQLEKLVHVS-NLYYTEPQEELAEKLVEHSG---ADRVFFCNSGAEANEAALKLARKYTGD-KGK-- 113 (379)
T ss_pred CCCCCHHHHHHHHHHHhhccccc-cccCCHHHHHHHHHHHhhCC---CCEEEEeCCcHHHHHHHHHHHHHHhhc-cCC--
Confidence 79999999999999998865432 24567888999999999874 579999999999999999999875321 110
Q ss_pred cccCCCcccccccceeEecccccccccCCCCCcCCcCccccc
Q 031493 82 DFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCS 123 (158)
Q Consensus 82 ~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s 123 (158)
.+ .+||. +..+|||.+.....
T Consensus 114 --~~---------~~vi~----------~~~~yh~~~~~~~~ 134 (379)
T TIGR00707 114 --EK---------KKIIA----------FENSFHGRTMGALS 134 (379)
T ss_pred --CC---------CeEEE----------ECCCcCCccHHHHH
Confidence 11 26888 99999998876443
No 87
>PRK07505 hypothetical protein; Provisional
Probab=98.94 E-value=3.6e-09 Score=91.26 Aligned_cols=87 Identities=13% Similarity=-0.067 Sum_probs=65.4
Q ss_pred CC-CCcHHHHHHHHHHHHhcCc---cCC-CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhccccc
Q 031493 2 FR-WFQIELARDMGYTAARFGH---VMF-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFD 76 (158)
Q Consensus 2 ~G-h~hP~Iv~Av~eQl~~l~~---~~~-~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~~~ 76 (158)
+| |+||+|++|+++|+++..+ ... ..+.++...+++++|++..+ . ++++.+||+||+|.|+|++++...
T Consensus 57 lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~~~~~~sG~~a~~~ai~~~~~~~~-- 130 (402)
T PRK07505 57 LGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFG---A-SVLTFTSCSAAHLGILPLLASGHL-- 130 (402)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhC---C-CEEEECChHHHHHHHHHHHHhccc--
Confidence 57 9999999999999988541 111 12356778999999999875 4 788888999999999999875321
Q ss_pred CCccccccCCCcccccccceeEecccccccccCCCCCcCCcC
Q 031493 77 HDVLVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLT 118 (158)
Q Consensus 77 ~g~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T 118 (158)
++. + .+||. +.++|||..
T Consensus 131 ~~~-----~---------~~vi~----------~~~~~H~s~ 148 (402)
T PRK07505 131 TGG-----V---------PPHMV----------FDKNAHASL 148 (402)
T ss_pred CCC-----C---------CCEEE----------EchhhhHhH
Confidence 111 1 25888 999999953
No 88
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=98.60 E-value=9.9e-08 Score=82.45 Aligned_cols=89 Identities=11% Similarity=-0.079 Sum_probs=65.7
Q ss_pred CCC-CcHHHHHHHHHHHHhcCccC---CC-CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH-HHHhcccc
Q 031493 2 FRW-FQIELARDMGYTAARFGHVM---FP-ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK-MAFRKFSF 75 (158)
Q Consensus 2 ~Gh-~hP~Iv~Av~eQl~~l~~~~---~~-~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK-lAR~~~~~ 75 (158)
+|- +||+|++|+.+|+++..+.. .. ...++...+|.++|+++.+ .++++|.+||++||+.|++ +++.+
T Consensus 56 lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g---~~~~~~~~SG~~An~~ai~~l~~~~--- 129 (406)
T PRK13393 56 LGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG---KEAALLFTSGYVSNWAALSTLGSRL--- 129 (406)
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC---CCcEEEeCCcHHHHHHHHHHhhcCC---
Confidence 455 79999999999999876431 11 1234567899999999986 4688999999999999999 66532
Q ss_pred cCCccccccCCCcccccccceeEecccccccccCCCCCcCCcCcccccC
Q 031493 76 DHDVLVDFLGKDTTEKCVELKHLKDHIMVILWVPWKLKHHHLTQGFCSN 124 (158)
Q Consensus 76 ~~g~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~yHG~T~g~~s~ 124 (158)
+| .+|. ....|||.+...+..
T Consensus 130 -~g-----------------~~I~----------~~~~~H~s~~~~~~~ 150 (406)
T PRK13393 130 -PG-----------------CVIL----------SDELNHASMIEGIRH 150 (406)
T ss_pred -CC-----------------CEEE----------EccchhHHHHHHHHH
Confidence 11 2555 677899988765443
No 89
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=98.06 E-value=1e-05 Score=69.60 Aligned_cols=65 Identities=18% Similarity=0.104 Sum_probs=51.3
Q ss_pred CcHHHHHHHHHHHHhcCccCC----CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhc
Q 031493 5 FQIELARDMGYTAARFGHVMF----PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRK 72 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~----~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~ 72 (158)
+||+|++|+.+|+++..+... ....++...+|.++|++..+ .+.+++.+||++||+.|+++++..
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g---~~~~l~~~sG~~an~~ai~~l~~~ 128 (402)
T TIGR01821 60 QHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG---KESALVFTSGYVANDATLATLAKI 128 (402)
T ss_pred CCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC---CCeEEEECchHHHHHHHHHHhhCC
Confidence 489999999999998664321 01246678899999999986 356888899999999999998753
No 90
>PRK09064 5-aminolevulinate synthase; Validated
Probab=97.82 E-value=8.8e-05 Score=63.88 Aligned_cols=68 Identities=13% Similarity=-0.019 Sum_probs=52.6
Q ss_pred CCCC-cHHHHHHHHHHHHhcCccCC---CC-CCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhc
Q 031493 2 FRWF-QIELARDMGYTAARFGHVMF---PE-NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRK 72 (158)
Q Consensus 2 ~Gh~-hP~Iv~Av~eQl~~l~~~~~---~~-~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~ 72 (158)
+|+. ||+|++|+.+++++..+... .. ..++...+|.++|++..+ .+..++.+||++||+.|+++++.+
T Consensus 57 lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g---~~~~~~~~sG~~an~~ai~~l~~~ 129 (407)
T PRK09064 57 LGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG---KEAALVFTSGYVSNDATLSTLAKL 129 (407)
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC---CCcEEEECcHHHHHHHHHHHHhCC
Confidence 5666 99999999999988654211 11 246778899999999875 356778899999999999988753
No 91
>PRK07179 hypothetical protein; Provisional
Probab=97.60 E-value=0.00027 Score=61.00 Aligned_cols=62 Identities=11% Similarity=-0.016 Sum_probs=47.9
Q ss_pred CcHHHHHHHHHHHHhcC---ccCCCCCC--ChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFG---HVMFPENV--YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~---~~~~~~~~--~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
+||+|++|+.+|+++.. +.+ ..+. .+...+|.++|++..+ .+.++|++||+|||+.+++...
T Consensus 69 ~~p~v~~a~~~~~~~~~~~~~~s-~~~~~~~~~~~~le~~la~~~g---~~~~~~~~sG~~An~~~l~~l~ 135 (407)
T PRK07179 69 GHPDIIKAQIAALQEEGDSLVMS-AVFLHDDSPKPQFEKKLAAFTG---FESCLLCQSGWAANVGLLQTIA 135 (407)
T ss_pred CCHHHHHHHHHHHHHhCCCCCcc-ccccCCchHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHhC
Confidence 69999999999998863 212 1222 3567888999999875 4578889999999999999654
No 92
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=97.09 E-value=0.00086 Score=57.12 Aligned_cols=67 Identities=16% Similarity=0.189 Sum_probs=47.1
Q ss_pred CCCCcHHHHHHHHHHHHhcCccCCCC-------CCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHh
Q 031493 2 FRWFQIELARDMGYTAARFGHVMFPE-------NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71 (158)
Q Consensus 2 ~Gh~hP~Iv~Av~eQl~~l~~~~~~~-------~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~ 71 (158)
.||+||++++++.+|+ .. +..... -..+...+++++|.++.+.+ .+.+.++++|+++.+.+++.++.
T Consensus 30 ~~~~~p~~~~~~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~-~~~v~~~~~g~~~~~~~~~~~~~ 103 (398)
T cd00613 30 YKHNPPAVIKRNILEN-EF-YTAYTPYQPEISQGRLQALFELQTMLCELTGMD-VANASLQDEATAAAEAAGLAAIR 103 (398)
T ss_pred cCCcCcHHHHHHhccc-cC-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC-ccceeccCchHHHHHHHHHHHHh
Confidence 5899999999988887 32 111111 01234567888888887543 45788888888888999998874
No 93
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=96.91 E-value=0.0039 Score=53.90 Aligned_cols=61 Identities=16% Similarity=0.104 Sum_probs=45.8
Q ss_pred CcHHHHHHHHHHHHhcCccC---CCCC-CChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVM---FPEN-VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~---~~~~-~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
+||+|++|+.+++++..... ...+ ..+...+|.++|++..+ ....++.+||++||+.+++.
T Consensus 61 ~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g---~~~~i~~~sG~~a~~~~i~~ 125 (410)
T PRK13392 61 QHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG---KESALLFTSGYVSNDAALST 125 (410)
T ss_pred CCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC---CCCEEEECcHHHHHHHHHHH
Confidence 59999999999998865321 0112 23467889999999886 34667778999999999993
No 94
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=96.64 E-value=0.01 Score=49.93 Aligned_cols=68 Identities=12% Similarity=-0.132 Sum_probs=47.3
Q ss_pred CCCcHHHHHHHHHHHHhcCccCCCCCCC--hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhc
Q 031493 3 RWFQIELARDMGYTAARFGHVMFPENVY--EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRK 72 (158)
Q Consensus 3 Gh~hP~Iv~Av~eQl~~l~~~~~~~~~~--~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~ 72 (158)
-|.||++++++.++++...... ..+.. +...++.+.|.++..-+ -..+.|+++|+||++.|++.++..
T Consensus 30 ~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~g~~-~~~~~~~~ggt~a~~~a~~~~~~~ 99 (371)
T PRK13520 30 TEPHPIARKAHEMFLETNLGDP-GLFPGTAKLEEEAVEMLGELLHLP-DAYGYITSGGTEANIQAVRAARNL 99 (371)
T ss_pred cCchHHHHHHHHHHHhcCCCCc-ccCccHHHHHHHHHHHHHHHhCCC-CCCeEEecCcHHHHHHHHHHHHhh
Confidence 4789999999999987532211 12222 22357788888877533 245788999999999999988753
No 95
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=96.62 E-value=0.011 Score=49.01 Aligned_cols=66 Identities=15% Similarity=0.014 Sum_probs=47.6
Q ss_pred CCCC-cHHHHHHHHHHHHhcCccCC----CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 2 FRWF-QIELARDMGYTAARFGHVMF----PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 2 ~Gh~-hP~Iv~Av~eQl~~l~~~~~----~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
+|+. ||+|.+|+++++++...... .....+...++.+.|.+..+ .+...+.+||++++.++++...
T Consensus 12 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~~~~iv~~sg~~a~~~~~~~~~ 82 (349)
T cd06454 12 LGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHG---KEAALVFSSGYAANDGVLSTLA 82 (349)
T ss_pred cccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhC---CCCEEEeccHHHHHHHHHHHhc
Confidence 6888 99999999999987432110 01235566788888888875 3456777899999999886553
No 96
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=96.38 E-value=0.021 Score=48.00 Aligned_cols=65 Identities=20% Similarity=0.075 Sum_probs=46.6
Q ss_pred CCC-CcHHHHHHHHHHHHhcCccCC----CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 2 FRW-FQIELARDMGYTAARFGHVMF----PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 2 ~Gh-~hP~Iv~Av~eQl~~l~~~~~----~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
+|| .+|+|++++++++++...... .....+...++.+++++... .+.+++.++|++++..+++..
T Consensus 50 ~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~~g~~~~~~~l~~~ 119 (385)
T PRK05958 50 LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---AERALLFSSGYAANLAVLTAL 119 (385)
T ss_pred ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEECcHHHHHHHHHHHh
Confidence 576 789999999999977432110 01235567788899988874 346777789999999888643
No 97
>PLN02822 serine palmitoyltransferase
Probab=96.25 E-value=0.012 Score=52.71 Aligned_cols=60 Identities=12% Similarity=0.108 Sum_probs=44.6
Q ss_pred CcHHHHHHHHHHHHhcCccCC----CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMF----PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~----~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
+||+|++|+.+++++...... ...+++...+|.|+|++..+. -+.++|+++++ ++.+|++
T Consensus 124 ~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~--~~~i~~s~G~~-a~~sai~ 187 (481)
T PLN02822 124 GNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT--PDSILYSYGLS-TIFSVIP 187 (481)
T ss_pred CCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC--CCEEEECCHHH-HHHHHHH
Confidence 699999999999998554211 012467788999999999874 36788876555 7888877
No 98
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=96.17 E-value=0.034 Score=47.15 Aligned_cols=65 Identities=12% Similarity=-0.008 Sum_probs=47.4
Q ss_pred CCC-CcHHHHHHHHHHHHhcCccCC----CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 2 FRW-FQIELARDMGYTAARFGHVMF----PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 2 ~Gh-~hP~Iv~Av~eQl~~l~~~~~----~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
+|| .+|++++++.+++++...... ..-..+...+++++|.+..+ .+..++.+||++|+++|++..
T Consensus 44 ~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g---~~~~i~~~sG~~a~~~a~~~~ 113 (385)
T TIGR01825 44 LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKK---TEAALVFQSGFNTNQGVLSAL 113 (385)
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhC---CCcEEEECcHHHHHHHHHHHh
Confidence 588 899999999999876433110 01134567788999988765 345677789999999998865
No 99
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=95.47 E-value=0.099 Score=43.36 Aligned_cols=65 Identities=15% Similarity=0.032 Sum_probs=45.2
Q ss_pred CCC-CcHHHHHHHHHHHHhcCccCC-CC--C-CChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 2 FRW-FQIELARDMGYTAARFGHVMF-PE--N-VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 2 ~Gh-~hP~Iv~Av~eQl~~l~~~~~-~~--~-~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
||+ .+|+|++++.+++++...... .. + ..+...++.++|++... .+..++.++|++++..+++..
T Consensus 27 ~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~~G~~~~~~~l~~~ 96 (360)
T TIGR00858 27 LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG---TEAALLFSSGYLANVGVISAL 96 (360)
T ss_pred ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCCEEEECchHHHHHHHHHHh
Confidence 684 889999999999976443210 01 1 23557778899988764 235666778999999887654
No 100
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=94.22 E-value=0.3 Score=41.23 Aligned_cols=65 Identities=15% Similarity=-0.013 Sum_probs=44.4
Q ss_pred CCC-CcHHHHHHHHHHHHhcCccC-CCCC---CChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 2 FRW-FQIELARDMGYTAARFGHVM-FPEN---VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 2 ~Gh-~hP~Iv~Av~eQl~~l~~~~-~~~~---~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
+|| .+|++.+++++++++..+.. ...+ ..+...++++.|.+..+ .+...+.+||++|++.+++..
T Consensus 53 ~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g---~~~~i~~tsG~~a~~~~~~~l 122 (397)
T PRK06939 53 LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG---TEDAILYSSCFDANGGLFETL 122 (397)
T ss_pred cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC---CCcEEEEcChHHHHHHHHHHh
Confidence 467 68999999999987743321 1111 23455678888888764 335566778999999998754
No 101
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=93.24 E-value=0.29 Score=35.50 Aligned_cols=37 Identities=30% Similarity=0.278 Sum_probs=28.4
Q ss_pred HHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHh
Q 031493 34 LECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71 (158)
Q Consensus 34 ~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~ 71 (158)
.++.++|++....+ .+.+.++++|++|++.+++.++.
T Consensus 3 ~~~~~~l~~~~~~~-~~~~~~~~~~t~a~~~~~~~~~~ 39 (170)
T cd01494 3 EELEEKLARLLQPG-NDKAVFVPSGTGANEAALLALLG 39 (170)
T ss_pred HHHHHHHHHHcCCC-CCcEEEeCCcHHHHHHHHHHhCC
Confidence 45667777776323 56899999999999999998753
No 102
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=93.11 E-value=0.4 Score=41.10 Aligned_cols=57 Identities=11% Similarity=-0.042 Sum_probs=44.8
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
+||+|.+|..+.+++.. + ..+...+|.++|++...-+ .+.++.++||++||..++..
T Consensus 34 ~~~~~~~~~~~~~~~~~-----g-~~~~~~~Le~~lA~~~g~~-~e~ilv~~gg~~a~~~~~~a 90 (346)
T TIGR03576 34 GGFKIDEEDLELLETYV-----G-PAIFEEKVQELGREHLGGP-EEKILVFNRTSSAILATILA 90 (346)
T ss_pred CChhHHHHHHHHHHHhc-----C-CHHHHHHHHHHHHHHcCCC-cceEEEECCHHHHHHHHHHH
Confidence 59999999999987742 1 3466778888998887533 37899999999999998863
No 103
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=91.82 E-value=0.96 Score=38.36 Aligned_cols=64 Identities=16% Similarity=0.105 Sum_probs=42.4
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCCC------ChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMFPENV------YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~~------~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
-.+.|.+++.+.++.. ..+..... .+...++-+++.+++.-+ .+.+.|+++|+||++.|++...
T Consensus 11 ~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~i~~t~~~t~a~~~al~~~~ 80 (379)
T TIGR03402 11 VDPEVLEAMLPYFTEY-FGNPSSMHSFGGEVGKAVEEAREQVAKLLGAE-PDEIIFTSGGTESDNTAIKSAL 80 (379)
T ss_pred CCHHHHHHHHHHHHhc-CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCcHHHHHHHHHHHHH
Confidence 4688999998887642 11111111 122345557777776544 4679999999999999999775
No 104
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=90.86 E-value=1.1 Score=37.28 Aligned_cols=38 Identities=18% Similarity=0.172 Sum_probs=30.8
Q ss_pred ChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 30 YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 30 ~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
.+...++.++|++..+ .+.+.+++||++|++.+++..+
T Consensus 17 ~~~~~~~~~~la~~~~---~~~~~~~~sgt~al~~~l~~l~ 54 (352)
T cd00616 17 GPKVREFEKAFAEYLG---VKYAVAVSSGTAALHLALRALG 54 (352)
T ss_pred CHHHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHcC
Confidence 4567788889998875 3578888999999999998664
No 105
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=90.45 E-value=1.5 Score=36.74 Aligned_cols=64 Identities=8% Similarity=-0.015 Sum_probs=42.1
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCCCC-------hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMFPENVY-------EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~~~-------~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
-++.+.+|+.+.++.... ......+ +...++.++|+++..-+ .+.+.|+++++||++.+++...
T Consensus 10 ~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~v~~~~g~t~a~~~~l~~l~ 80 (353)
T TIGR03235 10 IDPAVAEAMLPWLLEEFG-NPSSRTHEFGHNAKKAVERARKQVAEALGAD-TEEVIFTSGATESNNLAILGLA 80 (353)
T ss_pred CCHHHHHHHHHHHHhcCC-CCCchhhHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCCHHHHHHHHHHHHH
Confidence 468899999888754221 1111111 22456667777777533 4579999999999999997654
No 106
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=90.37 E-value=0.96 Score=40.24 Aligned_cols=65 Identities=17% Similarity=-0.080 Sum_probs=39.0
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCC--ChHHHHHHHHHHhhcCCCCC-CcEEE--eCChHHHHHHHHHHHHh
Q 031493 6 QIELARDMGYTAARFGHVMFPENV--YEPALECAELLLQGVGKGWA-SRAYF--SDNGSTAIEIALKMAFR 71 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~--~~~~~~LAe~L~~~~P~~~l-~~v~f--~~SGSEA~E~AlKlAR~ 71 (158)
+|++.+++.+.+++... ++...+ .+...+.-+.|.+++..+.- +.+.| +++|||||-.||+.||.
T Consensus 54 ~p~~~~~~~~~l~~~~~-np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~ 123 (431)
T TIGR01788 54 EPEARKLMDETINKNMI-DKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKW 123 (431)
T ss_pred CHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHH
Confidence 78888888887764221 111222 23334455566666542200 23544 78999999999998874
No 107
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=90.35 E-value=0.65 Score=41.13 Aligned_cols=64 Identities=14% Similarity=0.039 Sum_probs=41.6
Q ss_pred cHHHHHHHHHHHHhcCccCCCC---CC---ChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHh
Q 031493 6 QIELARDMGYTAARFGHVMFPE---NV---YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~---~~---~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~ 71 (158)
+|++++++...+... +.+... +- ....++.-+.+++++.-. ...++|+++|+|+|-.|||=+..
T Consensus 14 ~~~v~~~m~~~~~~~-fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~-~~eIiFTSG~TEsnNlaI~g~~~ 83 (386)
T COG1104 14 DPEVLEAMLPYLTEV-FGNPSSLHSFGREARKAVEEAREQIAKLLGAD-PEEIIFTSGATESNNLAIKGAAL 83 (386)
T ss_pred CHHHHHHHHHHHHhh-cCCccchhHhHHHHHHHHHHHHHHHHHHhCCC-CCeEEEecCCcHHHHHHHHhhHH
Confidence 689999999988765 222111 11 111223334555666544 46899999999999999996543
No 108
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=90.24 E-value=0.62 Score=40.28 Aligned_cols=41 Identities=24% Similarity=0.198 Sum_probs=33.1
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
..+.++...+|.++|+++.+ .+.+++++||++|++++++..
T Consensus 49 ~r~~~p~~~~le~~la~l~g---~~~~~~~~sG~~Ai~~al~al 89 (380)
T TIGR01325 49 SRYANPTVAAFEERIAALEG---AERAVATATGMSAIQAALMTL 89 (380)
T ss_pred ecCCCchHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHH
Confidence 35677788899999999864 457788999999999999644
No 109
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=90.12 E-value=1.9 Score=36.59 Aligned_cols=64 Identities=8% Similarity=-0.069 Sum_probs=42.1
Q ss_pred CCCC-cHHHHHHHHHHHHhcCc-cCCCCC--C-ChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 2 FRWF-QIELARDMGYTAARFGH-VMFPEN--V-YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 2 ~Gh~-hP~Iv~Av~eQl~~l~~-~~~~~~--~-~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
+|+. +|++++++.+++++... .....+ . .+...+|-++|++... .+.+...+||++|+..++..
T Consensus 49 lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g---~~~~ii~~~~~~a~~~~~~~ 117 (393)
T TIGR01822 49 LGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLG---TEDTILYASCFDANGGLFET 117 (393)
T ss_pred cccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC---CCcEEEECchHHHHHHHHHH
Confidence 3666 89999999999987422 111111 1 3445667788888775 23555558999999977653
No 110
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=89.93 E-value=1.1 Score=38.33 Aligned_cols=57 Identities=14% Similarity=-0.046 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 7 IELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 7 P~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
.+..+++.+.++.-.. ....+...+|-+++.+.++ ...+..++||+.|.++|++...
T Consensus 5 ~e~~~~v~~~l~s~~~----~~~g~~~~~fE~~~a~~~g---~~~~~~~~sgt~Al~~al~~l~ 61 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWL----STYGPYVEEFEKEFAEYFG---VKYAVAVSSGTSALHLALRALG 61 (363)
T ss_dssp HHHHHHHHHHHHHTCC----SSSSHHHHHHHHHHHHHHT---SSEEEEESSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCc----cCCCHHHHHHHHHHHHHhC---CCeEEEeCChhHHHHHHHHhcC
Confidence 4556777777765422 1125677889999999885 5689999999999999998743
No 111
>PRK06225 aspartate aminotransferase; Provisional
Probab=89.76 E-value=1.5 Score=37.24 Aligned_cols=61 Identities=15% Similarity=0.088 Sum_probs=42.2
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCCCC-hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMFPENVY-EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~~~-~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
-+|++.+++.++++.... ..+.. ....+|-+.+++...-. .+.+.++++|+||+..+++..
T Consensus 42 ~~~~~~~a~~~~~~~~~~---~~y~~~~g~~~lr~~ia~~l~~~-~~~v~~~~g~t~al~~~~~~~ 103 (380)
T PRK06225 42 PHEEVREAMIRCIEEGEY---CKYPPPEGFPELRELILKDLGLD-DDEALITAGATESLYLVMRAF 103 (380)
T ss_pred CCHHHHHHHHHHHhcCCC---CCCCCCcchHHHHHHHHHhcCCC-CCcEEEeCCHHHHHHHHHHHh
Confidence 378999999988764221 12222 22455667777776433 457999999999999998865
No 112
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=89.64 E-value=0.95 Score=39.49 Aligned_cols=59 Identities=14% Similarity=0.062 Sum_probs=42.3
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCCCC-hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMFPENVY-EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~~~-~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
.+|++.+|+.+.- .. .. ..|-. +...++.+++.+++. ...++|+.|||.||..||...-
T Consensus 12 ~~~~m~eam~~a~-~~-~~--~~YG~D~~~~~~e~~~ae~~g---~~a~~Fv~sGT~aN~lal~~~~ 71 (342)
T COG2008 12 PTPEMREALAAAN-AV-GD--DVYGEDPTTNALEQRIAELFG---KEAALFVPSGTQANQLALAAHC 71 (342)
T ss_pred CCHHHHHHHHhcc-cc-CC--CCCCCCHHHHHHHHHHHHHhC---CceEEEecCccHHHHHHHHHhc
Confidence 4799999987542 11 11 23443 445678888888875 4689999999999999998554
No 113
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=89.41 E-value=2.1 Score=36.83 Aligned_cols=65 Identities=11% Similarity=0.018 Sum_probs=41.9
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCCCC-------hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHh
Q 031493 5 FQIELARDMGYTAARFGHVMFPENVY-------EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~~~-------~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~ 71 (158)
-++.+.+++.+.++... .+.....+ +...++.++|.++..-+ .+.+.|+++||||++.+++....
T Consensus 15 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~v~~~~g~t~a~~~~l~~l~~ 86 (402)
T TIGR02006 15 VDPRVAEKMMPYLTEKF-GNPASRSHSFGWEAEEAVENARNQVAELIGAD-SREIVFTSGATESNNLAIKGIAH 86 (402)
T ss_pred CCHHHHHHHHHHHHhcC-CCCChhhhHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCCHHHHHHHHHHHHHH
Confidence 36889999988775432 11111111 22334556677776533 46799999999999999987653
No 114
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=89.24 E-value=2 Score=36.98 Aligned_cols=64 Identities=9% Similarity=-0.019 Sum_probs=43.2
Q ss_pred CCCcHHHHHHHHHHHHhcCcc----CCCC-CCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 3 RWFQIELARDMGYTAARFGHV----MFPE-NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 3 Gh~hP~Iv~Av~eQl~~l~~~----~~~~-~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
|--.+++++|+.+........ +... ...+...++-+++++... .+.+.|+++|++|+++|++..
T Consensus 30 ~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g---~~~~~~~~g~t~a~~~al~~l 98 (387)
T PRK09331 30 GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG---MDEARVTHGAREGKFAVMHSL 98 (387)
T ss_pred CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHh
Confidence 566788999998876432111 0111 123446677788888874 467889999999999998755
No 115
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=89.11 E-value=2.3 Score=36.23 Aligned_cols=57 Identities=11% Similarity=-0.008 Sum_probs=39.9
Q ss_pred CcHHHHHHHHHHHHhcC------ccCCCCC-----CChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHH
Q 031493 5 FQIELARDMGYTAARFG------HVMFPEN-----VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEI 64 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~------~~~~~~~-----~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~ 64 (158)
.||++.+++.+++++.. -.+..+. .++...++.++|+++++ .+.+++.+||+.||-.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~---~~~~l~~~sG~~a~~~ 86 (370)
T PRK05937 19 RSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG---APEAFIVPSGYMANLG 86 (370)
T ss_pred CCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC---CCeEEEECChHHHHHH
Confidence 48999999999987751 0111111 34567888889999885 3467888999999853
No 116
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=88.92 E-value=1.8 Score=36.54 Aligned_cols=64 Identities=9% Similarity=0.001 Sum_probs=43.3
Q ss_pred CCCcHHHHHHHHHHHHhcCccCC----CC-CCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 3 RWFQIELARDMGYTAARFGHVMF----PE-NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 3 Gh~hP~Iv~Av~eQl~~l~~~~~----~~-~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
|+-.|++++++.+.........+ .. ...+...++-+++++..+ .+.++++++|+||++.+++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g---~~~i~~~~g~t~al~~~l~~~ 79 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLG---MDEARVTPGAREGKFAVMHSL 79 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcC---CceEEEeCCHHHHHHHHHHHh
Confidence 56778888888766532111110 01 123456788888888874 578999999999999988754
No 117
>PLN02651 cysteine desulfurase
Probab=88.90 E-value=1.5 Score=37.17 Aligned_cols=65 Identities=8% Similarity=0.001 Sum_probs=41.7
Q ss_pred CcHHHHHHHHHHHHhcCccCCCC--C-----CChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHh
Q 031493 5 FQIELARDMGYTAARFGHVMFPE--N-----VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~--~-----~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~ 71 (158)
-.+++.+++.+++.... ..... . ..+...++.++|.++...+ .+.+.|+++||||+..+++.+..
T Consensus 11 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~v~~t~~~t~a~~~~l~~~~~ 82 (364)
T PLN02651 11 IDPRVLDAMLPFLIEHF-GNPHSRTHLYGWESEDAVEKARAQVAALIGAD-PKEIIFTSGATESNNLAIKGVMH 82 (364)
T ss_pred CCHHHHHHHHHHHHhCC-CCCChhhhHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCCHHHHHHHHHHHHHH
Confidence 35788899888765321 11000 0 0122445667777776533 45799999999999999988754
No 118
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=87.57 E-value=2.1 Score=36.77 Aligned_cols=56 Identities=16% Similarity=0.176 Sum_probs=42.3
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
.|++.+|+++.++.+ . -..+...++.+++++... .+.++++++|++|+.+|++..-
T Consensus 26 ~~~v~~a~~~~~~~~--~----~~~~~~~~~~~~~a~~~g---~~~~~~~~g~t~al~~al~al~ 81 (363)
T TIGR01437 26 SDEVADAQKRGAQNY--F----EIKELVNKTGEYIANLLG---VEDAVIVSSASAGIAQSVAAVI 81 (363)
T ss_pred CHHHHHHHHHHHhcC--C----CHHHHHHHHHHHHHHhhC---CCeEEEEcCHHHHHHHHHHHHh
Confidence 689999999887542 1 123456677788888764 4578999999999999998663
No 119
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=87.47 E-value=1.8 Score=36.01 Aligned_cols=58 Identities=10% Similarity=0.106 Sum_probs=38.5
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
+|++++|++++++.... +..+...++-+.+++...-+ .+.+.+++++++++..+++..
T Consensus 34 ~~~~~~a~~~~~~~~~~-----y~~~~~~~lr~~ia~~~~~~-~~~i~~~~G~~~~l~~~~~~l 91 (346)
T TIGR01141 34 PPKAKEALRAEADKLHR-----YPDPDPAELKQALADYYGVD-PEQILLGNGSDEIIELLIRAF 91 (346)
T ss_pred CHHHHHHHHHhHHHhhc-----CCCCCHHHHHHHHHHHhCcC-hHHEEEcCCHHHHHHHHHHHh
Confidence 68999999988754321 22222245556666665422 467999999999998887654
No 120
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=87.24 E-value=1.6 Score=38.24 Aligned_cols=42 Identities=14% Similarity=0.010 Sum_probs=34.6
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
..+.++...+|.++|+++.+ ...+.+++||++|+.++++...
T Consensus 52 sr~~~p~~~~le~~lA~l~g---~~~~v~~~sG~~Ai~~al~~l~ 93 (418)
T TIGR01326 52 SRLMNPTTDVLEQRIAALEG---GVAALAVASGQAAITYAILNLA 93 (418)
T ss_pred ECCCChhHHHHHHHHHHHhC---CCeEEEEccHHHHHHHHHHHHh
Confidence 35677888899999999875 3578889999999999997553
No 121
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=87.08 E-value=0.9 Score=38.34 Aligned_cols=59 Identities=19% Similarity=0.191 Sum_probs=41.7
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCCC-ChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHh
Q 031493 5 FQIELARDMGYTAARFGHVMFPENV-YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~~-~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~ 71 (158)
.||+|.+|+.+. . ...- .|. .+...+|.+++.++++ .+.+.|+.||+-||-.|++..-+
T Consensus 7 ~~~~m~~a~~~a-~-~gd~---~Yg~D~~~~~l~~~i~~l~g---~e~a~f~~sGT~An~~al~~~~~ 66 (290)
T PF01212_consen 7 PTPAMLEAMAAA-N-VGDD---AYGEDPTTARLEERIAELFG---KEAALFVPSGTMANQLALRAHLR 66 (290)
T ss_dssp S-HHEEHHHHHT-T-SB-C---CTTSSHHHHHHHHHHHHHHT---SSEEEEESSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHcc-c-cCCc---ccCCChhHHHHHHHHHHHcC---CCEEEEeCCCChHHHHHHHHHHh
Confidence 478888888432 2 2221 343 4567789999999986 45778999999999999987663
No 122
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=86.72 E-value=6.7 Score=34.82 Aligned_cols=37 Identities=19% Similarity=0.121 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 31 EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 31 ~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
+...+|.++|++... .+.+++++|||+|+..|++...
T Consensus 63 ~~~~~fe~~lA~~~g---~~~~v~~~sGt~al~~aL~al~ 99 (438)
T PRK15407 63 RFNDAFEKKLAEFLG---VRYALLVNSGSSANLLAFSALT 99 (438)
T ss_pred hhHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHHh
Confidence 345678888888874 4679999999999999998764
No 123
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=86.31 E-value=2.4 Score=34.97 Aligned_cols=58 Identities=16% Similarity=0.058 Sum_probs=40.5
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+|++.+++.+.+... .. ....+...++.+.+.+... .+.+.++++||||+..+++..
T Consensus 10 ~~~~v~~a~~~~~~~~---~~-~~~~~~~~~l~~~~a~~~g---~~~~~~~~~gt~a~~~~~~~l 67 (338)
T cd06502 10 PTPEMLEAMAAANVGD---DV-YGEDPTTAKLEARAAELFG---KEAALFVPSGTAANQLALAAH 67 (338)
T ss_pred CCHHHHHHHHhcccCC---cc-cCCCHHHHHHHHHHHHHhC---CCeEEEecCchHHHHHHHHHh
Confidence 4788999988754221 11 1234556788888888775 246788899999999998754
No 124
>PLN02955 8-amino-7-oxononanoate synthase
Probab=85.90 E-value=3.9 Score=37.15 Aligned_cols=61 Identities=10% Similarity=-0.078 Sum_probs=45.6
Q ss_pred CcHHHHHHHHHHHHhcCccCC-C---CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMF-P---ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~-~---~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
+||+|.+++.+.+++...... . .-.+....+|-++|++... .+.+.+.+||-.||-.++..
T Consensus 117 ~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g---~e~all~sSGy~AN~~~i~a 181 (476)
T PLN02955 117 SHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKK---KEDCLVCPTGFAANMAAMVA 181 (476)
T ss_pred CCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHC---CCcEEEECChHHHHHHHHHH
Confidence 699999999999988653211 0 1123455678889999874 56788889999999999875
No 125
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=85.14 E-value=3.4 Score=35.41 Aligned_cols=40 Identities=18% Similarity=0.001 Sum_probs=32.7
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.++...+|.++|+++.+ .+.+++++||++|+..+++..
T Consensus 36 r~~~p~~~~le~~la~l~g---~~~a~~~~sG~~Ai~~~l~~l 75 (369)
T cd00614 36 RIGNPTVDALEKKLAALEG---GEAALAFSSGMAAISTVLLAL 75 (369)
T ss_pred CCCChhHHHHHHHHHHHHC---CCCEEEEcCHHHHHHHHHHHH
Confidence 4567888899999999875 356778899999999999865
No 126
>PLN03032 serine decarboxylase; Provisional
Probab=84.91 E-value=1.8 Score=37.82 Aligned_cols=38 Identities=5% Similarity=0.024 Sum_probs=27.5
Q ss_pred HHHHHHHHhhcCCCCCCc--EEEeCChHHHHHHHHHHHHhc
Q 031493 34 LECAELLLQGVGKGWASR--AYFSDNGSTAIEIALKMAFRK 72 (158)
Q Consensus 34 ~~LAe~L~~~~P~~~l~~--v~f~~SGSEA~E~AlKlAR~~ 72 (158)
.+..+.+++++..+ -+. .+|+++|||||-.|++.||..
T Consensus 69 ~~v~~~ia~llg~~-~~~~~G~fTsGGTEaNl~al~~ar~~ 108 (374)
T PLN03032 69 VGVLDWFARLWELE-KDEYWGYITTCGTEGNLHGILVGREV 108 (374)
T ss_pred HHHHHHHHHHhCCC-CccCCEEEeCchHHHHHHHHHHHHHh
Confidence 44556666666432 233 489999999999999999953
No 127
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=84.84 E-value=3.4 Score=36.24 Aligned_cols=63 Identities=14% Similarity=-0.005 Sum_probs=40.8
Q ss_pred CCcHHHHHHHHHHH-HhcCccC-CCCC--CChHHHHHHH----HHHhhcCCCCCCcE-EEeCChHHHHHHHHHHH
Q 031493 4 WFQIELARDMGYTA-ARFGHVM-FPEN--VYEPALECAE----LLLQGVGKGWASRA-YFSDNGSTAIEIALKMA 69 (158)
Q Consensus 4 h~hP~Iv~Av~eQl-~~l~~~~-~~~~--~~~~~~~LAe----~L~~~~P~~~l~~v-~f~~SGSEA~E~AlKlA 69 (158)
|-||++.+|+.+.+ ++..... ...+ .++...+|-+ +++++.. .+.+ ++.+||+.||.+++..-
T Consensus 39 ~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g---~~~alv~~~SG~~A~~~~l~al 110 (416)
T PRK13034 39 FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFG---CDYANVQPHSGSQANGAVYLAL 110 (416)
T ss_pred CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhC---CCceEEecCCcHHHHHHHHHHh
Confidence 45899999999885 5533211 0111 1455566666 8888774 3456 45699999999998643
No 128
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=84.84 E-value=3.4 Score=34.73 Aligned_cols=59 Identities=8% Similarity=0.025 Sum_probs=38.2
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+|.+.+|+.++++.+.+. +.....+|-+.+++...-. .+.++++++++||+..+++..
T Consensus 43 ~~~~v~~a~~~~~~~~~~~-----p~~g~~~lr~~ia~~~~~~-~~~i~~t~G~~~~l~~~~~~~ 101 (359)
T PRK03158 43 PSPKVKEAIAAHLDELALY-----PDGYAPELRTKVAKHLGVD-EEQLLFGAGLDEVIQMISRAL 101 (359)
T ss_pred CCHHHHHHHHHHHHHhhcC-----CCCcHHHHHHHHHHHhCCC-HHHEEECCCHHHHHHHHHHHH
Confidence 3789999999888764332 2222334555555554322 467999999999998776543
No 129
>PLN02721 threonine aldolase
Probab=84.09 E-value=3.8 Score=33.94 Aligned_cols=59 Identities=15% Similarity=0.099 Sum_probs=40.4
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
-.|.+.+|+++. ...... .+..+...+|-+.|++... .+.+.+++|||+++..+++...
T Consensus 18 ~~~~~~~a~~~~--~~~~~~--~~~~~~~~~l~~~la~~~~---~~~~~~~~~Gs~a~~~~l~~~~ 76 (353)
T PLN02721 18 PTDAMRAAMANA--EVDDDV--LGYDPTALRLEEEMAKIFG---KEAALFVPSGTMGNLISVLVHC 76 (353)
T ss_pred CCHHHHHHHHhc--cCCCcc--cCCCHHHHHHHHHHHHHhC---CceeEEecCccHHHHHHHHHHc
Confidence 357888888653 222211 2335557788889998875 4567888999999988887643
No 130
>PRK02948 cysteine desulfurase; Provisional
Probab=83.64 E-value=7.3 Score=32.99 Aligned_cols=66 Identities=12% Similarity=0.139 Sum_probs=41.4
Q ss_pred CCcHHHHHHHHHHHHhcCccCCCCC-----CChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 4 WFQIELARDMGYTAARFGHVMFPEN-----VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 4 h~hP~Iv~Av~eQl~~l~~~~~~~~-----~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
.-.+.+.+++.+.++.......... ..+...++.+.|.+....+ .+.+.|+++++||+..+++...
T Consensus 11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~i~~~~g~t~a~~~~~~~~~ 81 (381)
T PRK02948 11 PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGE-EQGIYFTSGGTESNYLAIQSLL 81 (381)
T ss_pred CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCcHHHHHHHHHHHHH
Confidence 3467899999887754221110011 1122345556677766433 4689999999999999988765
No 131
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=83.19 E-value=3.7 Score=36.28 Aligned_cols=40 Identities=13% Similarity=0.014 Sum_probs=32.2
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
...++...+|.++|+++.+ ...+++.+||++|++++++..
T Consensus 59 r~~~p~~~~le~~lA~l~g---~~~al~~~SG~~Ai~~al~al 98 (427)
T PRK05994 59 RITNPTNAVLEERVAALEG---GTAALAVASGHAAQFLVFHTL 98 (427)
T ss_pred CCCCccHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHH
Confidence 4556777889999999875 346888899999999999765
No 132
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=83.06 E-value=6.5 Score=32.99 Aligned_cols=63 Identities=22% Similarity=0.165 Sum_probs=38.9
Q ss_pred cHHHHHHHHHHHHhcC-ccCCCCCC-----ChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFG-HVMFPENV-----YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~-~~~~~~~~-----~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
.+.+.+++.+.+++.. ......+. .+...++-+.|.+.+.....+.++|+++|++|++.++.-
T Consensus 13 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~ 81 (376)
T TIGR01977 13 PDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG 81 (376)
T ss_pred CHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh
Confidence 3578888888776542 11111121 133456667777776432124799999999999988754
No 133
>PRK14012 cysteine desulfurase; Provisional
Probab=82.48 E-value=5.5 Score=34.25 Aligned_cols=65 Identities=12% Similarity=-0.001 Sum_probs=39.9
Q ss_pred CcHHHHHHHHHHHHhc-CccCCCCCC-------ChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARF-GHVMFPENV-------YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l-~~~~~~~~~-------~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
-++.+.+++.+.+... ...+..... .+...++-++|++....+ .+.+.|++||+||++.+++...
T Consensus 15 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~-~~~v~~~~g~t~al~~~l~~l~ 87 (404)
T PRK14012 15 VDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGAD-PREIVFTSGATESDNLAIKGAA 87 (404)
T ss_pred CCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcC-cCeEEEeCCHHHHHHHHHHHHH
Confidence 3678888888876511 111110000 122344556677776533 4569999999999999998664
No 134
>PRK10534 L-threonine aldolase; Provisional
Probab=82.21 E-value=4.2 Score=33.75 Aligned_cols=56 Identities=14% Similarity=-0.024 Sum_probs=40.7
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCC-CChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMFPEN-VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~-~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
-+|.+++|+.+..+.. ..| +.+...+|.++|.+... .+.+.++++|++|+-.++..
T Consensus 12 p~~~~~~a~~~~~~~~-----~~Y~~~~~~~~L~~~la~~~g---~~~~~v~~~g~~a~~~~l~~ 68 (333)
T PRK10534 12 PSRAMLEAMMAAPVGD-----DVYGDDPTVNALQDYAAELSG---KEAALFLPTGTQANLVALLS 68 (333)
T ss_pred CCHHHHHHHHhccCCC-----cccCCCHHHHHHHHHHHHHhC---CCeEEEeCchHHHHHHHHHH
Confidence 4688888887643321 234 56677889999999864 56777889999998888864
No 135
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=81.56 E-value=5.9 Score=33.95 Aligned_cols=61 Identities=10% Similarity=-0.048 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHhcCccCCCC----CCCh----HHHHHHHHHHhhcCCCCCCcEEE-eCChHHHHHHHHH
Q 031493 7 IELARDMGYTAARFGHVMFPE----NVYE----PALECAELLLQGVGKGWASRAYF-SDNGSTAIEIALK 67 (158)
Q Consensus 7 P~Iv~Av~eQl~~l~~~~~~~----~~~~----~~~~LAe~L~~~~P~~~l~~v~f-~~SGSEA~E~AlK 67 (158)
..|++|+.+.+......+... ...+ ...+.-++|.+++..+.-..|+| ..|||+|+|+|+.
T Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~ 74 (349)
T TIGR01364 5 EEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPL 74 (349)
T ss_pred HHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHH
Confidence 478888888876433211111 1122 23445566666654210234555 5679999999976
No 136
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=81.12 E-value=5.6 Score=32.31 Aligned_cols=36 Identities=17% Similarity=0.179 Sum_probs=24.4
Q ss_pred HHHHHHHHhhcC--CCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 34 LECAELLLQGVG--KGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 34 ~~LAe~L~~~~P--~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
.++++.|....+ .+ .+.++++++|++|++.+++...
T Consensus 43 ~~l~~~l~~~~~~~~~-~~~~~~~~~~t~a~~~~~~~~~ 80 (350)
T cd00609 43 EAIAEWLGRRGGVDVP-PEEIVVTNGAQEALSLLLRALL 80 (350)
T ss_pred HHHHHHHHHHhCCCCC-cceEEEecCcHHHHHHHHHHhC
Confidence 345554444321 12 4579999999999999998774
No 137
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=81.08 E-value=8.1 Score=33.54 Aligned_cols=61 Identities=11% Similarity=0.099 Sum_probs=42.3
Q ss_pred CcHHHHHHHHHHHHhcCccC---CCCC-CChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVM---FPEN-VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~---~~~~-~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
+||++++++.+++++..... ...+ ......+|.++|+++.. -+..++.+||..|+-+++..
T Consensus 13 ~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g---~e~al~~~sG~~a~~~~i~~ 77 (392)
T PLN03227 13 SSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLG---TESAILYSDGASTTSSTVAA 77 (392)
T ss_pred CCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhC---CCcEEEecCcHHHHHHHHHH
Confidence 58999999999998743211 1112 23456788899998875 34667778998888877753
No 138
>PLN02263 serine decarboxylase
Probab=81.04 E-value=5.4 Score=36.22 Aligned_cols=40 Identities=8% Similarity=0.037 Sum_probs=27.6
Q ss_pred HHHHHHHHhhcCCCC-CCcEEEeCChHHHHHHHHHHHHhcc
Q 031493 34 LECAELLLQGVGKGW-ASRAYFSDNGSTAIEIALKMAFRKF 73 (158)
Q Consensus 34 ~~LAe~L~~~~P~~~-l~~v~f~~SGSEA~E~AlKlAR~~~ 73 (158)
.++.+-+.+++..+. -..-+++++|||||-.||+.||.+.
T Consensus 136 ~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~ 176 (470)
T PLN02263 136 VGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF 176 (470)
T ss_pred HHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc
Confidence 345566666654220 1135789999999999999999853
No 139
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=81.03 E-value=8.8 Score=32.66 Aligned_cols=63 Identities=10% Similarity=-0.060 Sum_probs=36.6
Q ss_pred cHHHHHHHHHHHHhcCccCCC--CCCC------hHHHHHHHHHHhhcCCCCCCcEEEe-CChHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFP--ENVY------EPALECAELLLQGVGKGWASRAYFS-DNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~--~~~~------~~~~~LAe~L~~~~P~~~l~~v~f~-~SGSEA~E~AlKl 68 (158)
++.|.+|+.+.+......+.. ...+ +...+.-++|.+++.-+.-..|.|+ +|||+|+|+++.-
T Consensus 11 p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~ 82 (355)
T cd00611 11 PEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLN 82 (355)
T ss_pred CHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHh
Confidence 578999998887542211110 1111 3344556667776642112456666 5699999998764
No 140
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=80.32 E-value=8 Score=33.27 Aligned_cols=55 Identities=11% Similarity=-0.065 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 7 IELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 7 P~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
++-.+++.+.++.-.. ...+...+|-++|++... .+.+.+++||++|+++|++..
T Consensus 14 ~~e~~~~~~~l~~~~~-----~~g~~~~~le~~la~~~g---~~~~v~~~sgt~al~lal~al 68 (379)
T PRK11658 14 DEELAAVKEVLRSGWI-----TTGPKNQALEQAFCQLTG---NQHAIAVSSATAGMHITLMAL 68 (379)
T ss_pred HHHHHHHHHHHHcCCc-----cCCHhHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHc
Confidence 3446666666553211 234556788888988875 456788899999999999754
No 141
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=80.30 E-value=5.4 Score=35.28 Aligned_cols=42 Identities=14% Similarity=0.023 Sum_probs=32.9
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
....++...+|.++|+++.+ -..+.+++||++|++++++...
T Consensus 53 ~r~~~pt~~~Le~~lA~l~g---~~~~l~~ssG~~Ai~~al~al~ 94 (425)
T PRK06084 53 TRIMNPTNDVLEQRVAALEG---GVGALAVASGMAAITYAIQTIA 94 (425)
T ss_pred cCCCCchHHHHHHHHHHHhC---CCceeEehhHHHHHHHHHHHHh
Confidence 35567778899999999864 3456778999999999997553
No 142
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=80.23 E-value=7.2 Score=35.16 Aligned_cols=40 Identities=20% Similarity=0.256 Sum_probs=27.7
Q ss_pred HHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhccc
Q 031493 35 ECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFS 74 (158)
Q Consensus 35 ~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~~ 74 (158)
++..-|.+++..+.-..-.|+.+|||||..|+++||..+.
T Consensus 105 ~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~ 144 (460)
T COG0076 105 RVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWR 144 (460)
T ss_pred HHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHH
Confidence 3445555555332123468899999999999999997653
No 143
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=80.04 E-value=4.2 Score=35.87 Aligned_cols=53 Identities=13% Similarity=-0.026 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 8 ELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 8 ~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
+..+++.+.++.-.. . .-+...++-+.+++.++ ...+.-++||+.|.+.|+|.
T Consensus 16 ~e~~~v~~vl~sg~i----~-~G~~v~~FE~~~ae~~G---~k~ava~~sgT~AL~laL~a 68 (374)
T COG0399 16 EELAAVQEVLKSGWL----T-GGPFVRRFEQAFAEYLG---VKYAVAVSSGTAALHLALLA 68 (374)
T ss_pred HHHHHHHHHHHcCCe----e-cChHHHHHHHHHHHHhC---CCeEEEecChHHHHHHHHHh
Confidence 344555555544221 1 14556678888888875 56888999999999999983
No 144
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=80.00 E-value=8.7 Score=33.22 Aligned_cols=56 Identities=13% Similarity=0.064 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 7 IELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 7 P~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
++..+++.+.++.-... + ..+...++.+.+.+..+ .+.+.+++||++|.+.+++..
T Consensus 11 ~~e~~a~~~~~~~~~~~---~-~g~~~~~~e~~la~~~g---~~~~v~~~sgt~aL~~~l~al 66 (376)
T TIGR02379 11 GQELEYIAEAISEGKLS---G-DGPFSRRCETWLENRTG---TKKALLTPSCTAALEMAALLL 66 (376)
T ss_pred HHHHHHHHHHHHcCCcc---C-CcHHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHc
Confidence 34566777666542211 1 23456778888888764 568999999999999988754
No 145
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=79.51 E-value=11 Score=31.46 Aligned_cols=65 Identities=11% Similarity=-0.167 Sum_probs=39.8
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCCCC--hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHh
Q 031493 5 FQIELARDMGYTAARFGHVMFPENVY--EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~~~--~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~ 71 (158)
.+|.+.+|+.+.+++... ....++. +...++.+.|.++..-+ .+.+.++++|++|+..++..++.
T Consensus 32 ~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~~~~~g~~~~~~~~~~~~~~ 98 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLG-DPGLFPGTKKIEEEVVGSLGNLLHLP-DAYGYIVSGGTEANIQAVRAAKN 98 (373)
T ss_pred chHHHHHHHHHHhhcCCC-CcccCccHHHHHHHHHHHHHHHhCCC-CCCeEEeccHHHHHHHHHHHHHH
Confidence 467777777766543211 1111222 22356777777777533 34577888999999999887653
No 146
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=79.18 E-value=8.2 Score=34.17 Aligned_cols=60 Identities=22% Similarity=0.084 Sum_probs=44.7
Q ss_pred CcHHHHHHHHHHHHhcCcc-CCCC---CCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHV-MFPE---NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~-~~~~---~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
+||+|.+|+.+.+++.... .... -.++...+|-++|++..+ ...+...+||-.||..++-
T Consensus 54 ~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g---~e~al~f~SGy~AN~~~i~ 117 (388)
T COG0156 54 SHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG---AEAALLFSSGFVANLGLLS 117 (388)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEEcccchhHHHHHH
Confidence 5999999999999884321 1111 145667889999999875 5577777899999998875
No 147
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=78.98 E-value=4.1 Score=34.97 Aligned_cols=62 Identities=13% Similarity=-0.055 Sum_probs=34.5
Q ss_pred cHHHHHHHHHHHHhcCcc-CCCCCCChHHHHHHHHHHhhcCCCCCCcEEE-eCChHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHV-MFPENVYEPALECAELLLQGVGKGWASRAYF-SDNGSTAIEIALK 67 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~-~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f-~~SGSEA~E~AlK 67 (158)
+|+|.+|+.++...+... +...-..+...+.-++|.+++.-+.-..|.| .+|||+|+|+++.
T Consensus 15 ~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~ 78 (361)
T TIGR01366 15 RLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATF 78 (361)
T ss_pred CHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHH
Confidence 688888887553222211 1111112334455566666654210235666 5789999999985
No 148
>PRK07050 cystathionine beta-lyase; Provisional
Probab=78.91 E-value=9.3 Score=33.31 Aligned_cols=41 Identities=20% Similarity=0.141 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
..+.++...+|.++|+++.+ .+.+.+++||++|+.+++...
T Consensus 60 ~r~~~pt~~~Le~~lA~l~g---~~~~l~~~sgt~Ai~~~l~al 100 (394)
T PRK07050 60 GLHATPTSLALAQRLAEIEG---GRHALLQPSGLAAISLVYFGL 100 (394)
T ss_pred CCCCCHHHHHHHHHHHHHhC---CCeEEEeccHHHHHHHHHHHH
Confidence 45678888899999999875 458999999999999999644
No 149
>PLN02409 serine--glyoxylate aminotransaminase
Probab=78.74 E-value=2.6 Score=36.52 Aligned_cols=37 Identities=22% Similarity=0.044 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 32 PALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 32 ~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
...++.++|.++..-+..+.+++.+||++|+++++..
T Consensus 43 ~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~ 79 (401)
T PLN02409 43 LTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTN 79 (401)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHh
Confidence 3445666666665433124688899999999998864
No 150
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=77.89 E-value=5.3 Score=34.69 Aligned_cols=40 Identities=18% Similarity=0.036 Sum_probs=31.8
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.++...+|.++|+++.+ .+.+.+++||++|+.+++...
T Consensus 57 r~~~p~~~~le~~la~l~g---~~~~v~~ssG~~Ai~~al~al 96 (390)
T PRK08133 57 RFTNPTVTMFQERLAALEG---AEACVATASGMAAILAVVMAL 96 (390)
T ss_pred CCCChHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHH
Confidence 4567778889999999875 346788899999999988643
No 151
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=77.88 E-value=5.1 Score=33.90 Aligned_cols=66 Identities=15% Similarity=0.109 Sum_probs=42.7
Q ss_pred CCcHHHHHHHHHHHHhcCccC---CCCCC---ChHHHHHHHHHHhhcCCCCC-CcEEEeCChHHHHHHHHHHHH
Q 031493 4 WFQIELARDMGYTAARFGHVM---FPENV---YEPALECAELLLQGVGKGWA-SRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 4 h~hP~Iv~Av~eQl~~l~~~~---~~~~~---~~~~~~LAe~L~~~~P~~~l-~~v~f~~SGSEA~E~AlKlAR 70 (158)
-..+.|.+++.+.+....... ...+. .+...+.-++|++++.-+ . +.+.|+.++++|++.++.-.+
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~-~~~~v~~~~~~t~a~~~~~~~l~ 82 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAP-PDEEVVFTSNGTEALNAVASSLL 82 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSS-TTEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCc-cccccccccccchhhhhhhhccc
Confidence 346789999998876543211 01111 222345666777776544 3 579999999999999998774
No 152
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=77.57 E-value=7.9 Score=33.31 Aligned_cols=62 Identities=8% Similarity=-0.028 Sum_probs=35.4
Q ss_pred cHHHHHHHHHHHHhcC-----ccCCCCCCC---hHHHHHHHHHHhhcCC-CCCCcEEEeCChHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFG-----HVMFPENVY---EPALECAELLLQGVGK-GWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~-----~~~~~~~~~---~~~~~LAe~L~~~~P~-~~l~~v~f~~SGSEA~E~AlK 67 (158)
+++|.+|+.+++.... ......... +...+.-++|.+++.. ...+-+++..||+.|+|+|+.
T Consensus 15 p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~ 85 (360)
T PRK05355 15 PEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPM 85 (360)
T ss_pred CHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHH
Confidence 5789999888763321 000011112 3345566677776642 212335566899999999975
No 153
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=76.88 E-value=3.8 Score=35.87 Aligned_cols=60 Identities=13% Similarity=0.022 Sum_probs=34.2
Q ss_pred cHH-HHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcC--CCCCCcEEEeCChHHHHHHHHHH
Q 031493 6 QIE-LARDMGYTAARFGHVMFPENVYEPALECAELLLQGVG--KGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~-Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P--~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
+|. +++|+++++-...|.+ .-..+...+.-+.|.+++. .+ .+-+++..|||.|+|+|+.=
T Consensus 15 ~~~~~~~~~~~~~~~~~HRs--~~F~~i~~e~~~~L~~l~~~~~~-~~v~~l~GsGT~a~Eaa~~n 77 (374)
T TIGR01365 15 RPGWSIEELKNAPLGRSHRS--KLGKEKLAEAIKKTREMLGVPAD-YLIGIVPASDTGAVEMALWS 77 (374)
T ss_pred CchhhHHHHhhhhcccCcCC--HHHHHHHHHHHHHHHHHhCCCCC-cEEEEECCchHHHHHHHHHH
Confidence 566 6677776543333321 1112233445566666653 22 33456688999999999863
No 154
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=76.22 E-value=11 Score=31.80 Aligned_cols=58 Identities=9% Similarity=0.109 Sum_probs=38.3
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|++.+++++.++.+. .|+.....+|-+.|++..+-. .+.+..+++++||+..+++..
T Consensus 45 ~~~~~~~~~~~~~~~~-----~Y~~~~~~~lr~~ia~~~~~~-~~~I~it~G~~~al~~~~~~~ 102 (357)
T PRK14809 45 SPAAVEAIREAAERVH-----SYPKASHADLTAALADRWDVS-PEQVWLANGGDGALDYLARAM 102 (357)
T ss_pred CHHHHHHHHHHHhhhh-----cCCCCCHHHHHHHHHHHhCCC-cceEEECCCHHHHHHHHHHHh
Confidence 4678888887765432 233222345666666665433 467999999999999888754
No 155
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=76.17 E-value=19 Score=30.18 Aligned_cols=65 Identities=8% Similarity=-0.050 Sum_probs=38.4
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCC------ChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENV------YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~------~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
-|.+.+++.+.++...-....+.. .+...++-+.|.+.+.....+.+++++||+||++.+++...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~ 82 (373)
T cd06453 12 PQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLG 82 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhh
Confidence 467888888776543211000111 12233455667776642213478999999999999997654
No 156
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=76.05 E-value=7.7 Score=33.22 Aligned_cols=54 Identities=13% Similarity=0.092 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 9 LARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 9 Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
-.+++.+.++..... + ..+...++.+.|.+... .+.+.+++||++|++++++..
T Consensus 13 ~~~~~~~~l~~~~~~---g-~~~~~~~~e~~la~~~g---~~~~v~~~sgt~al~~~l~~~ 66 (375)
T PRK11706 13 ELDYIQQAMSSGKLC---G-DGGFTRRCQQWLEQRFG---SAKVLLTPSCTAALEMAALLL 66 (375)
T ss_pred HHHHHHHHHHcCCcc---C-CCHHHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHh
Confidence 355666655442211 1 23445677777888763 578999999999999988754
No 157
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=75.73 E-value=9.8 Score=31.43 Aligned_cols=39 Identities=23% Similarity=0.174 Sum_probs=27.9
Q ss_pred HHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHHHHh
Q 031493 33 ALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMAFR 71 (158)
Q Consensus 33 ~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKlAR~ 71 (158)
..++++.+.++...+ .-..+.|+++|+||+..|++.++.
T Consensus 40 e~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~ 79 (345)
T cd06450 40 EAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARD 79 (345)
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHH
Confidence 344666666665421 023688999999999999999975
No 158
>PRK02769 histidine decarboxylase; Provisional
Probab=75.43 E-value=11 Score=32.88 Aligned_cols=39 Identities=10% Similarity=0.114 Sum_probs=26.8
Q ss_pred HHHHHHHHhhcCCCC-CCcEEEeCChHHHHHHHHHHHHhc
Q 031493 34 LECAELLLQGVGKGW-ASRAYFSDNGSTAIEIALKMAFRK 72 (158)
Q Consensus 34 ~~LAe~L~~~~P~~~-l~~v~f~~SGSEA~E~AlKlAR~~ 72 (158)
.+..+.+++++..+. -...+|+++|||||-.|+..||.+
T Consensus 68 ~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~ 107 (380)
T PRK02769 68 RDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLAREL 107 (380)
T ss_pred HHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHh
Confidence 355566666654220 113588999999999999999864
No 159
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=75.23 E-value=12 Score=32.01 Aligned_cols=58 Identities=5% Similarity=-0.044 Sum_probs=38.6
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
+|++.+++.+.+..... ++.....+|-+.|++...-+ .+.+.++++++|++..+++..
T Consensus 44 ~~~v~~a~~~~~~~~~~-----Yp~~g~~~Lr~aia~~~~~~-~~~I~vt~Gs~e~i~~~~~~l 101 (366)
T PRK01533 44 SPRVLDELQKSWLDHAL-----YPDGGATTLRQTIANKLHVK-MEQVLCGSGLDEVIQIISRAV 101 (366)
T ss_pred CHHHHHHHHHHHHhcCc-----CCCCCHHHHHHHHHHHhCCC-cceEEECCCHHHHHHHHHHHh
Confidence 57888888877654322 33323345666666655433 568999999999999888754
No 160
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=74.61 E-value=9.5 Score=33.89 Aligned_cols=40 Identities=15% Similarity=0.082 Sum_probs=32.2
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
...++...+|.++|+++.+. ..+.+++||++|+.+|+...
T Consensus 60 R~~~p~~~~le~~lA~l~g~---~~av~~sSGt~Al~~al~~l 99 (433)
T PRK08134 60 RISNPTVAVLEERVAALEGG---VGAIATASGQAALHLAIATL 99 (433)
T ss_pred cCcChHHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHH
Confidence 45677888899999988753 35788999999999998744
No 161
>PRK07682 hypothetical protein; Validated
Probab=74.04 E-value=30 Score=29.27 Aligned_cols=63 Identities=11% Similarity=0.034 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhc-CccCCCCCCChHHHHHHHHHHhhcCCC-CC-CcEEEeCChHHHHHHHHHHH
Q 031493 7 IELARDMGYTAARF-GHVMFPENVYEPALECAELLLQGVGKG-WA-SRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 7 P~Iv~Av~eQl~~l-~~~~~~~~~~~~~~~LAe~L~~~~P~~-~l-~~v~f~~SGSEA~E~AlKlA 69 (158)
+.+.+++.++++.. ..+.......+....+|+.+.+...-. .. +.++++++|++|++++++..
T Consensus 36 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l 101 (378)
T PRK07682 36 WNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAI 101 (378)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHh
Confidence 35688888776531 111101112234456777776532211 02 37999999999999988654
No 162
>PRK06108 aspartate aminotransferase; Provisional
Probab=73.52 E-value=18 Score=30.46 Aligned_cols=64 Identities=13% Similarity=-0.007 Sum_probs=38.9
Q ss_pred cHHHHHHHHHHHHhcCc-cCCCCCCChHHHHHHHHHHhhcC--CCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGH-VMFPENVYEPALECAELLLQGVG--KGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~-~~~~~~~~~~~~~LAe~L~~~~P--~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
.|.+.+++++.+..... +....-..+....+++.+.+..+ -. .+.++++++|++|+..+++...
T Consensus 39 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~-~~~i~~t~g~~~al~~~~~~l~ 105 (382)
T PRK06108 39 PDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATP-PERIAVTSSGVQALMLAAQALV 105 (382)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcC-cceEEEeCChHHHHHHHHHHhc
Confidence 56788888887654321 11001112334556666655433 12 3679999999999999888653
No 163
>KOG2433 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.43 E-value=7.1 Score=35.27 Aligned_cols=62 Identities=15% Similarity=0.025 Sum_probs=40.8
Q ss_pred cHHHHHHHHHHHHhcC-ccCCCCC--CChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhcc
Q 031493 6 QIELARDMGYTAARFG-HVMFPEN--VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKF 73 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~-~~~~~~~--~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~~ 73 (158)
|-+|.+|+.+.-++-. ++...++ ++|...-| +.|+.+ -.++.+++||+|-.|.+-.+||++.
T Consensus 435 HrEiQqaLvdi~DKpA~FVGSrQWIGStEis~vL-n~ll~~-----~skil~v~sGaEva~~~rELA~HFq 499 (577)
T KOG2433|consen 435 HREIQQALVDIQDKPAKFVGSRQWIGSTEISFVL-NELLKL-----ESKILAVNSGAEVAERVRELARHFQ 499 (577)
T ss_pred HHHHHHHHHhccCcccceecccceecchhHHHHH-HHHhcc-----ceEEEEeccccHHHHHHHHHHHHhh
Confidence 7899999998766643 2332223 22322222 333332 3589999999999999999999873
No 164
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=73.32 E-value=13 Score=31.51 Aligned_cols=63 Identities=13% Similarity=0.108 Sum_probs=36.1
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCCh----HHHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYE----PALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~----~~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|.+++++++.+....... ..|+.. ....+|+.+.+..+.+ ..+.++.+++++||+..+++..
T Consensus 41 ~~~~~~al~~~l~~~~~~~-~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~ 108 (368)
T PRK03317 41 SPALVADIAEAVAEAAAGL-NRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAF 108 (368)
T ss_pred CHHHHHHHHHHHhhhhhhh-ccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHh
Confidence 5788999988875421111 123222 2233444444322211 1357999999999999888754
No 165
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=73.09 E-value=11 Score=32.58 Aligned_cols=40 Identities=20% Similarity=0.156 Sum_probs=32.9
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
..+.++...+|.++|+++.. -+.+..++||.+|+.+++.+
T Consensus 49 ~R~~~p~~~~le~~lA~leg---~~~~v~~~sG~aAi~~~l~~ 88 (364)
T PRK07269 49 TRTKNPTRAKLEETLAAIES---ADYALATSSGMSAIVLAFSV 88 (364)
T ss_pred eCCCCccHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHH
Confidence 35677888899999999874 46889999999999999953
No 166
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=72.28 E-value=6.7 Score=32.35 Aligned_cols=40 Identities=15% Similarity=0.159 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHhhcCCCC-CCcEEEeCChHHHHHHHHHHHH
Q 031493 31 EPALECAELLLQGVGKGW-ASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 31 ~~~~~LAe~L~~~~P~~~-l~~v~f~~SGSEA~E~AlKlAR 70 (158)
+...++.++|.+...-+. ...+.++.+||+|++.+++...
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~ 71 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV 71 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc
Confidence 556677788887764220 2257789999999999997553
No 167
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=72.19 E-value=9.7 Score=32.73 Aligned_cols=60 Identities=12% Similarity=-0.100 Sum_probs=32.4
Q ss_pred cHH-HHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeC-ChHHHHHHHHH
Q 031493 6 QIE-LARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSD-NGSTAIEIALK 67 (158)
Q Consensus 6 hP~-Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~-SGSEA~E~AlK 67 (158)
+|+ |.+|+.+.+-...|.. ....+...+.-++|.+++.-+.-+.|.|+. |||+|+|+++.
T Consensus 24 ~~~~v~~a~~~~~~~~~hr~--~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~ 85 (378)
T PRK03080 24 RPGWQLEALADALLGRSHRQ--KPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALW 85 (378)
T ss_pred ChHHHHHHHHhhhcccCcCC--HHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHH
Confidence 467 7888765422111211 111233344455566655421124677765 99999999885
No 168
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=71.28 E-value=19 Score=30.35 Aligned_cols=60 Identities=10% Similarity=0.017 Sum_probs=38.7
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|.+++++++.+.... . ..+..+...+|-+.|++..+-. .+.+.++++.++|+..+++..
T Consensus 37 p~~~~~a~~~~~~~~~-~--~~y~~~~~~~lr~~ia~~~~~~-~~~i~it~G~~~~l~~~~~~l 96 (351)
T PRK14807 37 PEEVIKNIQEIVKSSQ-V--NIYPDPTAEKLREELARYCSVV-PTNIFVGNGSDEIIHLIMLAF 96 (351)
T ss_pred CHHHHHHHHHHhhcCc-c--cCCCCccHHHHHHHHHHHhCCC-cccEEEecCHHHHHHHHHHHh
Confidence 4678888887664321 1 2333334456777777766433 467888888899988877653
No 169
>PRK09105 putative aminotransferase; Provisional
Probab=70.93 E-value=20 Score=30.59 Aligned_cols=58 Identities=16% Similarity=0.024 Sum_probs=39.8
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
+|.+.+++.+.+.... .|+.+...+|-+.+++...-. .+.|.++++++||+..+++..
T Consensus 58 ~~~~~~a~~~~~~~~~-----~Y~~~~~~~Lr~aia~~~~v~-~e~I~it~Gs~~ai~~~~~~l 115 (370)
T PRK09105 58 SPAARDAAARSAALSG-----RYDLELEDDLRTLFAAQEGLP-ADHVMAYAGSSEPLNYAVLAF 115 (370)
T ss_pred CHHHHHHHHHHHHHhc-----CCCCchHHHHHHHHHHHhCcC-hhhEEEcCChHHHHHHHHHHH
Confidence 6788888887665432 233333556767777765433 468999999999999888644
No 170
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=70.93 E-value=34 Score=30.89 Aligned_cols=67 Identities=15% Similarity=0.031 Sum_probs=40.6
Q ss_pred CCCcHHHHHHHHHHHHhcC-ccCCC--CCCChHHHHHH-HHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 3 RWFQIELARDMGYTAARFG-HVMFP--ENVYEPALECA-ELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 3 Gh~hP~Iv~Av~eQl~~l~-~~~~~--~~~~~~~~~LA-e~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
|=.+|+|.+|+.+.+.... ..++. ++-.+...+.| +.+++++..+ -+.+.|+++++|+|-.++|=.-
T Consensus 53 ~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd-~~dIiFts~ATEs~Nlvl~~v~ 123 (428)
T KOG1549|consen 53 GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINAD-PSDIVFTSGATESNNLVLKGVA 123 (428)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCC-CCcEEEeCCchHHHHHHHHHhh
Confidence 4458999999998765532 22221 12223224444 3444444433 3349999999999999998544
No 171
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=68.22 E-value=19 Score=30.76 Aligned_cols=39 Identities=10% Similarity=0.157 Sum_probs=30.6
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
..+.++...+|.++|+++.+ .+..+.++||++|+..++.
T Consensus 47 ~r~~~pt~~~le~~la~l~g---~~~~~~~~sG~~ai~~~~~ 85 (366)
T PRK08247 47 SRTGNPTRGVLEQAIADLEG---GDQGFACSSGMAAIQLVMS 85 (366)
T ss_pred cCCCCchHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHH
Confidence 35677888899999999875 3456778899999987653
No 172
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=67.79 E-value=23 Score=29.96 Aligned_cols=58 Identities=9% Similarity=-0.018 Sum_probs=38.4
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|.+.+++.+.++.+.. |+.+...+|-+.+++...-. .+.+.++++++|++..+++..
T Consensus 34 p~~~~~a~~~~~~~~~~-----Y~~~~~~~lr~~ia~~~~~~-~~~i~it~Ga~~~l~~~~~~~ 91 (354)
T PRK06358 34 PESLKQAITENLDKLVE-----YPDPDYLELRKRIASFEQLD-LENVILGNGATELIFNIVKVT 91 (354)
T ss_pred CHHHHHHHHHHHHhhhc-----CCCccHHHHHHHHHHHhCCC-hhhEEECCCHHHHHHHHHHHh
Confidence 57888998887655432 22222345556666655333 468999999999999888753
No 173
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=67.75 E-value=17 Score=31.86 Aligned_cols=41 Identities=10% Similarity=0.018 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
..+.++...+|.++|+++.. .+.+.+++||++|+.+++...
T Consensus 48 ~R~~npt~~~Le~~lA~leg---~e~ivvt~gg~~Ai~~~l~al 88 (388)
T PRK08861 48 TRSGNPNRGLLEQTLSELES---GKGAVVTNCGTSALNLWVSAL 88 (388)
T ss_pred cCCCCchHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHH
Confidence 35678888899999999874 468999999999999998643
No 174
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=67.18 E-value=21 Score=30.00 Aligned_cols=57 Identities=11% Similarity=0.136 Sum_probs=36.1
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
.|.+.+++.+.++.+. .++.....+|-+.+++...-+ .+.+.+++++++++..+++.
T Consensus 47 ~~~~~~a~~~~~~~~~-----~y~~~~~~~lr~~ia~~~~~~-~~~i~~t~G~~~~l~~~~~~ 103 (367)
T PRK02731 47 SPKAIEAIRAAADELH-----RYPDGSGFELKAALAEKFGVD-PERIILGNGSDEILELLARA 103 (367)
T ss_pred CHHHHHHHHHHHHhhc-----CCCCCcHHHHHHHHHHHhCcC-HHHEEEcCCHHHHHHHHHHH
Confidence 5788899888776532 222222345666666665433 45788888888888776553
No 175
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=66.78 E-value=24 Score=31.57 Aligned_cols=38 Identities=18% Similarity=0.053 Sum_probs=30.8
Q ss_pred CCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 28 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 28 ~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
..++...+|.++|+++.+. ..+..++||+.|+.+++..
T Consensus 58 ~~nPtv~~lE~~la~leg~---~~av~~~SG~aAi~~al~a 95 (432)
T PRK06702 58 IGNPTLAAFEQKLAELEGG---VGAVATASGQAAIMLAVLN 95 (432)
T ss_pred CCCcHHHHHHHHHHHHhCC---CcEEEECCHHHHHHHHHHH
Confidence 4477888899999998753 4577789999999999973
No 176
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=66.74 E-value=28 Score=29.65 Aligned_cols=55 Identities=16% Similarity=-0.045 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 7 IELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 7 P~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
++-.+++.+.++.-.. ...+...+|-+++++... .+..+.++||++|+..+++..
T Consensus 10 ~~~~~~v~~~~~~~~~-----~~g~~~~~le~~la~~~g---~~~~v~~~sgt~al~~~l~al 64 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL-----TQGPTVPAFEEALAEYVG---AKYAVAFNSATSALHIACLAL 64 (380)
T ss_pred HHHHHHHHHHHhcCCc-----cCChhHHHHHHHHHHHHC---CCeEEEEcCHHHHHHHHHHHc
Confidence 3446677776654221 123445677788888774 345666779999999999754
No 177
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=66.70 E-value=28 Score=30.48 Aligned_cols=63 Identities=14% Similarity=0.106 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhcCccCCCC--CCChHHHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHHH
Q 031493 7 IELARDMGYTAARFGHVMFPE--NVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 7 P~Iv~Av~eQl~~l~~~~~~~--~~~~~~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKlA 69 (158)
|++.+++.+.++......+.. -..+....+|+.+.+..+.+ ..+.|+++++++||++.+++.-
T Consensus 72 ~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l 137 (430)
T PLN00145 72 PEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVL 137 (430)
T ss_pred HHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHh
Confidence 568888888776422111111 11222334555554322211 0357999999999999988753
No 178
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=66.32 E-value=20 Score=31.13 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=31.1
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
...++...+|.++|+++.+ -+.+.+++||++|+.+++..
T Consensus 46 r~gnPt~~~lE~~lA~l~g---~~~~~~~~sG~~Ai~~al~a 84 (377)
T TIGR01324 46 RRGTLTHFALQDAMCELEG---GAGCYLYPSGLAAVTNSILA 84 (377)
T ss_pred CCCCccHHHHHHHHHHHhC---CCcEEEECcHHHHHHHHHHH
Confidence 4556777888899998864 35788889999999999863
No 179
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=66.31 E-value=22 Score=29.74 Aligned_cols=58 Identities=12% Similarity=0.052 Sum_probs=35.3
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEE-eCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYF-SDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f-~~SGSEA~E~AlKlA 69 (158)
.|++.+++.+.++.+. .++.+...+|.+.|++...-. .+.+++ +++.+|++..+++..
T Consensus 49 ~~~~~~~~~~~~~~~~-----~y~~~~~~~lr~~ia~~~~~~-~~~i~~~~~Ga~~~i~~~~~~~ 107 (361)
T PRK00950 49 SPKAVEAIEKELSKIH-----RYPEPDAPELREALSKYTGVP-VENIIVGGDGMDEVIDTLMRTF 107 (361)
T ss_pred CHHHHHHHHHHHHhhc-----CCCCCCHHHHHHHHHHHhCCC-HHHEEEeCCCHHHHHHHHHHHh
Confidence 5788888887766432 222222355667777765423 357877 444478888887654
No 180
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=66.06 E-value=34 Score=29.13 Aligned_cols=63 Identities=6% Similarity=-0.063 Sum_probs=38.9
Q ss_pred cHHHHHHHHHHHHhcCcc-CCCCC-----CChHHHHHHHHHHhhcCC-CCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHV-MFPEN-----VYEPALECAELLLQGVGK-GWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~-~~~~~-----~~~~~~~LAe~L~~~~P~-~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+.+++.+.++..... ..... ..+...++.++|+++... . .+.|.|++|++|++..+++..
T Consensus 32 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~-~~~i~~~~~~t~~i~~~~~~~ 101 (401)
T PRK10874 32 PQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPD-AKNIVWTRGTTESINLVAQSY 101 (401)
T ss_pred CHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCHHHHHHHHHHHh
Confidence 467888887776542211 10000 122234566677777653 3 467999999999999988754
No 181
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=65.32 E-value=22 Score=31.56 Aligned_cols=40 Identities=13% Similarity=0.019 Sum_probs=32.1
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
...++...+|.++|+++.. -..+.+++||++|+.+++...
T Consensus 60 r~~~p~~~~Le~~lA~leg---~~~al~~~sG~~Ai~~al~~l 99 (431)
T PRK08248 60 RIMNPTTDVFEKRIAALEG---GIGALAVSSGQAAITYSILNI 99 (431)
T ss_pred CCCCchHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHH
Confidence 4567778889999999874 357788999999999998643
No 182
>PLN02242 methionine gamma-lyase
Probab=64.78 E-value=16 Score=32.30 Aligned_cols=40 Identities=20% Similarity=0.230 Sum_probs=32.8
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
...++...+|.++|+++.. ...+.+++||++|+.+++...
T Consensus 72 r~~~Pt~~~LE~~lA~l~g---~~~~l~~~sG~~Ai~~al~al 111 (418)
T PLN02242 72 RHFNPTVLNLGRQMAALEG---TEAAYCTASGMSAISSVLLQL 111 (418)
T ss_pred CCCChhHHHHHHHHHHHhC---CCeEEEEccHHHHHHHHHHHH
Confidence 4567888899999999874 457788899999999998754
No 183
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=64.72 E-value=25 Score=31.36 Aligned_cols=39 Identities=13% Similarity=-0.030 Sum_probs=30.2
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
...++...++.++|+++.. ....+..+||++|+.+|+..
T Consensus 65 r~~~pt~~~le~~la~l~g---~~~~v~fsSG~~Ai~~al~~ 103 (437)
T PRK05613 65 RLTNPTVEALENRIASLEG---GVHAVAFASGQAAETAAILN 103 (437)
T ss_pred CccChHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHH
Confidence 4567788888888988764 34677778999999988863
No 184
>PLN02483 serine palmitoyltransferase
Probab=64.65 E-value=44 Score=30.05 Aligned_cols=61 Identities=13% Similarity=0.044 Sum_probs=39.5
Q ss_pred CcHHHHHHHHHHHHhcCcc--C-CCCC-CChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHV--M-FPEN-VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~--~-~~~~-~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
.+|.+.+++.+.+++.... . ...+ ..+...+|-++|++....+ +.+.| ++|+.||.+++..
T Consensus 116 ~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~--~ai~~-~~G~~an~~~i~a 180 (489)
T PLN02483 116 ADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKP--AAIVF-GMGYATNSTIIPA 180 (489)
T ss_pred CCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCC--cEEEE-CCHHHHHHHHHHH
Confidence 3677888888887775432 1 1113 3566788888898887532 34444 7799888876653
No 185
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=64.48 E-value=41 Score=28.85 Aligned_cols=62 Identities=6% Similarity=-0.107 Sum_probs=38.0
Q ss_pred cHHHHHHHHHHHHhcCcc-CCCCC-----CChHHHHHHHHHHhhcCC-CCCCcEEEeCChHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHV-MFPEN-----VYEPALECAELLLQGVGK-GWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~-~~~~~-----~~~~~~~LAe~L~~~~P~-~~l~~v~f~~SGSEA~E~AlKl 68 (158)
.+.+++++.+.++..... ..... ..+...++-++|++.... + .+.|.|+++++|++..+++.
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~-~~~v~~t~g~t~~l~~~~~~ 104 (406)
T PRK09295 36 PSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARS-AEELVFVRGTTEGINLVANS 104 (406)
T ss_pred CHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCC-CCeEEEeCCHHHHHHHHHHH
Confidence 567888888877543211 11011 112234555667776642 2 46899999999999988864
No 186
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=64.27 E-value=26 Score=29.51 Aligned_cols=57 Identities=9% Similarity=-0.088 Sum_probs=36.1
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
.|++.+++++.++.+.. |+.+...+|-+.|++...-+ .+.+..+++++|++..+++.
T Consensus 37 ~~~~~~a~~~~~~~~~~-----Y~~~~~~~Lr~aia~~~~v~-~~~I~it~G~~~~i~~~~~~ 93 (360)
T PRK07392 37 PESVIAAIQSALSALRH-----YPDPDYRELRLALAQHHQLP-PEWILPGNGAAELLTWAGRE 93 (360)
T ss_pred CHHHHHHHHHHHHHhhc-----CCCcCHHHHHHHHHHHhCcC-hhhEEECCCHHHHHHHHHHH
Confidence 47888888877664322 22222234555555554323 46799999999999988764
No 187
>PLN02452 phosphoserine transaminase
Probab=63.98 E-value=15 Score=31.92 Aligned_cols=61 Identities=5% Similarity=-0.100 Sum_probs=32.6
Q ss_pred cHHHHHHHHHHHHhcCcc--CC--CCCCC----hHHHHHHHHHHhhc--CCCCCCcEEEeCChHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHV--MF--PENVY----EPALECAELLLQGV--GKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~--~~--~~~~~----~~~~~LAe~L~~~~--P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
+++|.+++.+++-..... +. ..... +...+.-++|.+++ |.+ ++-+++.-|||.++|+++.
T Consensus 19 p~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~-y~v~~l~Gsgt~~~ea~~~ 89 (365)
T PLN02452 19 PANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDN-YEVLFLQGGASTQFAAIPL 89 (365)
T ss_pred CHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCC-ceEEEEeCccHHHHHHHHH
Confidence 578888887764221100 00 01112 22334445555554 433 4445556789999999875
No 188
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=63.96 E-value=23 Score=30.75 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=29.9
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
..+.++...+|.++|+++.+ ......++||+.|+++++.
T Consensus 45 ~r~~~p~~~~Le~~la~l~g---~~~al~~~SG~~Al~~~l~ 83 (380)
T PRK06176 45 SRSGNPTRFALEELIADLEG---GVKGFAFASGLAGIHAVFS 83 (380)
T ss_pred cCCCChhHHHHHHHHHHHhC---CCCEEEECCHHHHHHHHHH
Confidence 35667888899999999865 3456777999999987664
No 189
>PRK07908 hypothetical protein; Provisional
Probab=63.65 E-value=24 Score=29.48 Aligned_cols=56 Identities=5% Similarity=0.036 Sum_probs=35.7
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCC-hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVY-EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~-~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
.+.+.+++.+.+..+.. |+. ....+|-+.+++...-+ .+.+.++++++||+..+++
T Consensus 37 ~~~~~~~~~~~~~~~~~-----Y~~~~g~~~lr~aia~~~~~~-~~~I~it~Ga~~al~~~~~ 93 (349)
T PRK07908 37 PEWLRERLAARLGDLAA-----YPSTEDERRARAAVAARHGRT-PDEVLLLAGAAEGFALLAR 93 (349)
T ss_pred CHHHHHHHHHHhhHhhc-----CCCccchHHHHHHHHHHhCcC-hhhEEECCCHHHHHHHHHh
Confidence 46788888887755322 221 12234445555544323 4689999999999998877
No 190
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=63.51 E-value=9.6 Score=32.02 Aligned_cols=37 Identities=16% Similarity=0.128 Sum_probs=24.6
Q ss_pred HHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHHH
Q 031493 33 ALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 33 ~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKlA 69 (158)
..++-++|.+++.-+ ..+.+.++.|||+|++.++.-.
T Consensus 37 ~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l 74 (363)
T TIGR02326 37 VEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA 74 (363)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc
Confidence 344556666665422 0236889999999999988643
No 191
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=63.29 E-value=23 Score=29.48 Aligned_cols=58 Identities=5% Similarity=-0.009 Sum_probs=37.9
Q ss_pred cHHHHHHHHHHHHh-cCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAAR-FGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~-l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
+|.+.+++.+.+.. +. .|+.....+|-+.+++...-+ .+.+.++++++||+..+++..
T Consensus 39 ~~~~~~a~~~~~~~~~~-----~y~~~~~~~lr~aia~~~~~~-~~~I~it~G~~~al~~~~~~l 97 (353)
T PRK05387 39 SPKVLEAIRAALGDDLR-----LYPDPNADALRQAIAAYYGLD-PEQVFVGNGSDEVLAHAFLAF 97 (353)
T ss_pred CHHHHHHHHHHhhhhhh-----cCCCCcHHHHHHHHHHHhCCC-HHHEEEcCCHHHHHHHHHHHh
Confidence 57888888876653 21 223222345556666655323 467999999999999988755
No 192
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=62.45 E-value=22 Score=30.17 Aligned_cols=58 Identities=9% Similarity=0.013 Sum_probs=37.4
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
+|++++++.+.++.... |+.+...+|-+.|++...-+ .+.+.++++.+|++..+++..
T Consensus 47 ~~~~~~a~~~~~~~~~~-----Y~~~~~~~Lr~~ia~~~~~~-~~~I~it~G~~~~l~~~~~~~ 104 (369)
T PRK08153 47 SPSVIAAMREAAAEIWK-----YGDPENHDLRHALAAHHGVA-PENIMVGEGIDGLLGLIVRLY 104 (369)
T ss_pred CHHHHHHHHHHHHHhhc-----CCCCccHHHHHHHHHHhCCC-HHHEEEcCCHHHHHHHHHHHh
Confidence 67889998877654322 22222345556666655322 357999998899999888754
No 193
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=62.37 E-value=15 Score=30.60 Aligned_cols=36 Identities=25% Similarity=0.072 Sum_probs=25.3
Q ss_pred HHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 33 ALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 33 ~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
..++.+.|.+..+-+....+++++||+||+..+++.
T Consensus 34 ~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~ 69 (356)
T cd06451 34 MDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSN 69 (356)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHH
Confidence 456777777776532023578899999999988864
No 194
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=62.31 E-value=31 Score=29.07 Aligned_cols=58 Identities=10% Similarity=-0.088 Sum_probs=36.9
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|.+.+|+.+.+..... |+.+...+|-+.+++...-+ .+.++++++++|++..+++..
T Consensus 35 p~~~~~a~~~~~~~~~~-----y~~~~~~~lr~~ia~~~~~~-~~~i~it~Ga~~~l~~~~~~l 92 (356)
T PRK08056 35 PVSLKRAIIDNLDCAER-----YPDVEYRHLHQALARHHQVP-ASWILAGNGETESIFAVVSGL 92 (356)
T ss_pred CHHHHHHHHHHHHhccc-----CcCccHHHHHHHHHHHhCcC-hhhEEECCCHHHHHHHHHHHh
Confidence 46788888877655332 22222345555566554323 467999998899999887753
No 195
>PRK05968 hypothetical protein; Provisional
Probab=62.25 E-value=30 Score=29.99 Aligned_cols=39 Identities=21% Similarity=0.081 Sum_probs=29.5
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
...++...+|.++|+++.. .+.....+||+.|+.+++..
T Consensus 59 r~~~p~~~~le~~lA~l~g---~~~av~~~sG~~Ai~~al~a 97 (389)
T PRK05968 59 RGDNPTVRAFEEMLAKLEG---AEDARGFASGMAAISSTVLS 97 (389)
T ss_pred CCCChhHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHH
Confidence 4556777889999999875 33555668999999998853
No 196
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=61.95 E-value=34 Score=28.65 Aligned_cols=59 Identities=14% Similarity=0.037 Sum_probs=36.5
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
.|.+.+++.+.++.... ..++.....+|-+.|++...-. .+.+.++++++|++...++.
T Consensus 33 ~~~~~~~~~~~~~~~~~---~~Y~~~g~~~lr~~ia~~~~~~-~~~I~~t~G~~~~l~~~~~~ 91 (337)
T PRK03967 33 PEELKEEIFEELKRVPF---NRYPHITSDPLREAIAEFYGLD-AENIAVGNGSDELISYLVKL 91 (337)
T ss_pred CHHHHHHHHHHhhcCcc---ccCCCCCHHHHHHHHHHHhCcC-cceEEEcCCHHHHHHHHHHH
Confidence 37788888877653221 2333333345555666655323 46899999999999876653
No 197
>PRK07568 aspartate aminotransferase; Provisional
Probab=61.74 E-value=40 Score=28.58 Aligned_cols=21 Identities=24% Similarity=0.336 Sum_probs=17.6
Q ss_pred CCcEEEeCChHHHHHHHHHHH
Q 031493 49 ASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 49 l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.++++++|++|+..+++..
T Consensus 88 ~~~i~~t~G~~~al~~~~~~l 108 (397)
T PRK07568 88 PDEILITNGGSEAILFAMMAI 108 (397)
T ss_pred cceEEEcCChHHHHHHHHHHh
Confidence 457999999999999988754
No 198
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=61.67 E-value=15 Score=34.45 Aligned_cols=39 Identities=18% Similarity=-0.001 Sum_probs=29.3
Q ss_pred HHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhc
Q 031493 33 ALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRK 72 (158)
Q Consensus 33 ~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~ 72 (158)
..++.+.|+++.+-+ -..-.|+++||+||-.||.+||..
T Consensus 125 E~~vi~~la~l~G~~-~~~G~~TsGGT~ANl~aL~~AR~~ 163 (608)
T TIGR03811 125 EEEVGKEFATLMGYK-NGWGHIVADGSLANLEGLWYARNI 163 (608)
T ss_pred HHHHHHHHHHHhCCC-CCCeEEeCChHHHHHHHHHHHHHh
Confidence 345667777777533 234568999999999999999964
No 199
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=61.45 E-value=37 Score=28.45 Aligned_cols=61 Identities=13% Similarity=0.095 Sum_probs=36.5
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|++++++.+.++..... .|+.....+|-+.|++...-..-+.+.++++++|++..+++..
T Consensus 41 ~~~~~~~~~~~~~~~~~~---~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~ 101 (356)
T PRK04870 41 PAELRAELGERLAEVALN---RYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALAC 101 (356)
T ss_pred CHHHHHHHHHHhhccccc---cCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHh
Confidence 468899998877542211 2332223456666666653220136888887788988887644
No 200
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=61.38 E-value=18 Score=31.39 Aligned_cols=41 Identities=15% Similarity=0.102 Sum_probs=33.0
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
..+.++...+|.++|+++.. -+.+..++||++|+.+++..-
T Consensus 46 ~R~~~p~~~~le~~lA~l~g---~~~v~~~~gg~~Ai~~~l~al 86 (382)
T TIGR02080 46 SRSGNPTRDLLQQALAELEG---GAGAVVTNTGMSAIHLVTTAL 86 (382)
T ss_pred cCCCCchHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHH
Confidence 45678888899999999865 246889999999999988643
No 201
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=60.91 E-value=26 Score=30.47 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=32.3
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
..+.++...+|.++|+++... ..+..++||++|+..++..
T Consensus 47 ~R~~~pt~~~L~~~lA~l~g~---~~~i~~~sg~~Ai~~~l~~ 86 (386)
T PRK08045 47 SRRGNPTRDVVQRALAELEGG---AGAVLTNTGMSAIHLVTTV 86 (386)
T ss_pred eCCCCccHHHHHHHHHHHhCC---CeEEEECCHHHHHHHHHHH
Confidence 356778888999999998652 3588899999999998863
No 202
>PRK09082 methionine aminotransferase; Validated
Probab=60.82 E-value=49 Score=28.15 Aligned_cols=64 Identities=16% Similarity=-0.020 Sum_probs=37.3
Q ss_pred cHHHHHHHHHHHHhcCc-cCCCCCCChHHHHHHHHHHhhcCCC-CC-CcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGH-VMFPENVYEPALECAELLLQGVGKG-WA-SRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~-~~~~~~~~~~~~~LAe~L~~~~P~~-~l-~~v~f~~SGSEA~E~AlKlA 69 (158)
+|.+.+++++.++.... +....-..+....+++.+.+..... .. +.+.++++|++|++.+++..
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~ 111 (386)
T PRK09082 45 PPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILAL 111 (386)
T ss_pred CHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHH
Confidence 57788888876653211 1100111223456777776553321 01 36888899999999998754
No 203
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=60.33 E-value=28 Score=29.60 Aligned_cols=36 Identities=14% Similarity=0.105 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 31 EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 31 ~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
+...++-|.|++... .+.+.++++|++|+..++...
T Consensus 51 ~~~~~~~e~lA~~~g---~~~~~i~~g~~~a~~~~~~~l 86 (370)
T TIGR02539 51 PPIHDFLEDLAEFLG---MDEARVTHGAREGKFAVMHAL 86 (370)
T ss_pred hHHHHHHHHHHHHhC---CCceEEECChHHHHHHHHHHh
Confidence 355667777888774 567777899999999987644
No 204
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=59.79 E-value=33 Score=28.85 Aligned_cols=60 Identities=12% Similarity=0.034 Sum_probs=36.6
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcC---CCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVG---KGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P---~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|.+++++.+.+..- ..+ .|+.+...+|-+.+++... -+ .+.|..+++++|++..+++..
T Consensus 34 p~~~~~~~~~~~~~~-~~~--~Y~~~~~~~Lr~aia~~~~~~~~~-~~~i~it~Ga~~~i~~~~~~~ 96 (335)
T PRK14808 34 PEDLVDEVFRRLNSD-TLR--IYYDSPDEELIEKILSYLDTDFLS-KNNVSVGNGADEIIYVMMLMF 96 (335)
T ss_pred CHHHHHHHHHHhhhh-hhh--cCCCCChHHHHHHHHHHhCCCCCC-cceEEEcCCHHHHHHHHHHHh
Confidence 467888888765431 111 1222234455566666543 12 457999999999999988744
No 205
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=59.77 E-value=56 Score=27.60 Aligned_cols=64 Identities=11% Similarity=-0.045 Sum_probs=36.4
Q ss_pred CcHHHHHHHHHHHHhcCcc-CC-CCCCChHHHHHHHHHHh---hcCC-CCCCcEEEeCChHHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHV-MF-PENVYEPALECAELLLQ---GVGK-GWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~-~~-~~~~~~~~~~LAe~L~~---~~P~-~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
-++.|.+++.+.++..... .. ..+......++.+.+.+ .... . .+.+.|+++++||+..+++..
T Consensus 11 ~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~-~~~i~~t~g~teal~~~~~~~ 80 (382)
T TIGR03403 11 LDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARD-LDDIIITSCATESNNWVLKGV 80 (382)
T ss_pred CCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCC-CCeEEEeCCHHHHHHHHHHHH
Confidence 4678999998877653211 10 01111222233333333 3321 2 367999999999999999855
No 206
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=59.73 E-value=39 Score=30.39 Aligned_cols=59 Identities=19% Similarity=0.172 Sum_probs=38.3
Q ss_pred cHHHHHHHHHHHHhcCccC--C-CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVM--F-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~--~-~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
++++.+|+.+.++...... . .+...+....+.++|+++.. ...+.+.+||+.|+..++.
T Consensus 94 ~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g---ae~alvv~sg~aAi~l~l~ 155 (454)
T TIGR00474 94 AEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG---AEDALVVNNNAAAVLLALN 155 (454)
T ss_pred CHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHH
Confidence 6889999988876532110 0 01123445667778888775 3346667899999988884
No 207
>PLN02880 tyrosine decarboxylase
Probab=59.54 E-value=30 Score=31.29 Aligned_cols=41 Identities=12% Similarity=0.041 Sum_probs=27.8
Q ss_pred HHHHHHHHHhhcCCCC-C-----CcEEEeCChHHHHHHHHHHHHhcc
Q 031493 33 ALECAELLLQGVGKGW-A-----SRAYFSDNGSTAIEIALKMAFRKF 73 (158)
Q Consensus 33 ~~~LAe~L~~~~P~~~-l-----~~v~f~~SGSEA~E~AlKlAR~~~ 73 (158)
..++.+-|.+++..+. . .-..++++|||||-.||.+||...
T Consensus 124 E~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~ 170 (490)
T PLN02880 124 EMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRV 170 (490)
T ss_pred HHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHH
Confidence 3445566666653220 1 135778899999999999999754
No 208
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=58.43 E-value=21 Score=31.81 Aligned_cols=38 Identities=13% Similarity=0.050 Sum_probs=30.4
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
...++...+|.++|+++.+ .+.+.+.+||+.|+.+++.
T Consensus 65 r~~~p~~~~Le~~lA~l~g---~~~av~~sSG~aAi~~al~ 102 (436)
T PRK07812 65 RIMNPTQDVVEQRIAALEG---GVAALLLASGQAAETFAIL 102 (436)
T ss_pred CCCCchHHHHHHHHHHHhC---CCeEEEEccHHHHHHHHHH
Confidence 4457778889999999865 3467888899999999985
No 209
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=58.23 E-value=63 Score=27.32 Aligned_cols=63 Identities=8% Similarity=-0.015 Sum_probs=38.7
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCC-----hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVY-----EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~-----~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+.+++.+.+..........+.. +...++-+.|.+..... .+.+.++++++|++..++...
T Consensus 30 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~-~~~v~~~~~~t~~l~~~~~~~ 97 (397)
T TIGR01976 30 PQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNAD-PPEVVFGANATSLTFLLSRAI 97 (397)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCC-CCeEEEeCCHHHHHHHHHHHH
Confidence 5789999988876532111011211 22456667777776533 346899999999987666543
No 210
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=56.39 E-value=26 Score=30.43 Aligned_cols=23 Identities=26% Similarity=0.226 Sum_probs=20.2
Q ss_pred cEEEeCChHHHHHHHHHHHHhcc
Q 031493 51 RAYFSDNGSTAIEIALKMAFRKF 73 (158)
Q Consensus 51 ~v~f~~SGSEA~E~AlKlAR~~~ 73 (158)
--.|+++|||||-.|+..||...
T Consensus 105 ~G~~t~Ggt~anl~al~aAR~~~ 127 (373)
T PF00282_consen 105 GGVFTSGGTEANLYALLAARERA 127 (373)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH
T ss_pred ceeEeccchHHHHHHHHHHHHHH
Confidence 36789999999999999999764
No 211
>PRK12414 putative aminotransferase; Provisional
Probab=56.28 E-value=67 Score=27.37 Aligned_cols=63 Identities=14% Similarity=0.018 Sum_probs=37.1
Q ss_pred cHHHHHHHHHHHHhcCccCCC--CCCChHHHHHHHHHHhhcCCC-C-CCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFP--ENVYEPALECAELLLQGVGKG-W-ASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~--~~~~~~~~~LAe~L~~~~P~~-~-l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|.+.+++.+.++.. ...+. .-..+....+++.|.+..+-. . -+.+..+++|++|++.+++..
T Consensus 44 ~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l 110 (384)
T PRK12414 44 DPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISAL 110 (384)
T ss_pred CHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHh
Confidence 577888887765532 11110 011233456777776654322 0 136899999999999888743
No 212
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=56.28 E-value=81 Score=26.81 Aligned_cols=63 Identities=3% Similarity=-0.128 Sum_probs=37.7
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCC-------hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVY-------EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~-------~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+.+++.+.++.... ......+ +...++-+.|++.+.....+.+.|++++|||+..++...
T Consensus 29 p~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~ 98 (398)
T TIGR03392 29 PQAVIDATQQFYRLSSG-TVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSY 98 (398)
T ss_pred CHHHHHHHHHHHHhcCC-CCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHh
Confidence 56788888876653221 1001111 223445566777664311357999999999999988744
No 213
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=56.08 E-value=22 Score=31.08 Aligned_cols=40 Identities=20% Similarity=0.094 Sum_probs=32.2
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
..+.++...+|.++|+++.. .+.+...+||+.|+..++..
T Consensus 65 ~r~~~p~~~~le~~lA~l~g---~~~al~~~sG~~Ai~~~l~a 104 (403)
T PRK07810 65 SRYGNPTVSMFEERLRLIEG---AEACFATASGMSAVFTALGA 104 (403)
T ss_pred eCCCCchHHHHHHHHHHHhC---CCcEEEECChHHHHHHHHHH
Confidence 35677778899999999864 35788889999999998854
No 214
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=56.02 E-value=16 Score=32.41 Aligned_cols=58 Identities=21% Similarity=0.179 Sum_probs=34.7
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
+|+|.+|+.++. +.|.+ .-......++.++|..+.....-+.+.+..||+-|+|+|+-
T Consensus 17 ~~~V~~am~~~~--~~h~s--~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~ 74 (383)
T COG0075 17 PPRVLLAMARPM--VGHRS--PDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVA 74 (383)
T ss_pred CHHHHHHhcCCC--CCCCC--HHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHH
Confidence 567777776552 22221 11234455667777777653212345566899999999985
No 215
>PRK04311 selenocysteine synthase; Provisional
Probab=55.68 E-value=50 Score=29.79 Aligned_cols=60 Identities=18% Similarity=0.155 Sum_probs=38.4
Q ss_pred cHHHHHHHHHHHHhcCccC--C-CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVM--F-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~--~-~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
.+++.+|+.+.+....... . .+...+...++.+.|+++.+ ...+++++||+.|+..++..
T Consensus 99 ~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~G---ae~a~vv~sgtaAl~l~l~~ 161 (464)
T PRK04311 99 SEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTG---AEDALVVNNNAAAVLLALNA 161 (464)
T ss_pred CHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHH
Confidence 5788888888775432111 0 01123334567777887764 34677889999999988853
No 216
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=55.53 E-value=29 Score=29.78 Aligned_cols=64 Identities=16% Similarity=0.034 Sum_probs=34.7
Q ss_pred cHHHHHHHHHHHHhcCccCCCCC-CCh-HHHHHHHHHHhhcCC--CCCCcEEEeCChHHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPEN-VYE-PALECAELLLQGVGK--GWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~-~~~-~~~~LAe~L~~~~P~--~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
.+++.+++.+.++......+... ..+ ....+++.+-...+. . .+.+.++++|++|+.++++...
T Consensus 50 ~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~ii~t~G~t~al~~~~~~l~ 117 (403)
T TIGR01265 50 DPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLT-ADDVVLTSGCSQAIEICIEALA 117 (403)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-HHHEEEecChHHHHHHHHHHhC
Confidence 46788888777654211111011 111 123344444321111 1 3579999999999999998653
No 217
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=55.01 E-value=25 Score=30.56 Aligned_cols=40 Identities=15% Similarity=0.003 Sum_probs=31.9
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
..+.++...+|.++|+++.. .+.+..++||++|+.+++..
T Consensus 54 ~r~~~p~~~~le~~lA~l~g---~~~av~~~sG~~Ai~~~l~a 93 (391)
T TIGR01328 54 SRLGNPTVSNLEGRIAFLEG---TEAAVATSSGMGAIAATLLT 93 (391)
T ss_pred eCCCCchHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHH
Confidence 35677778899999999875 34578889999999988754
No 218
>PRK07777 aminotransferase; Validated
Probab=54.98 E-value=65 Score=27.33 Aligned_cols=61 Identities=15% Similarity=0.018 Sum_probs=32.4
Q ss_pred cHHHHHHHHHHHHhcCccCCCCC--CChHHHHHHHHHHhhcCCC-CCC-cEEEeCChHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPEN--VYEPALECAELLLQGVGKG-WAS-RAYFSDNGSTAIEIALK 67 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~--~~~~~~~LAe~L~~~~P~~-~l~-~v~f~~SGSEA~E~AlK 67 (158)
.+.+.+++.+.+.... ..+... ..+....+++.+.+..+-. ..+ .++++++|++|+++++.
T Consensus 39 ~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 103 (387)
T PRK07777 39 PPEMLEAAQEAIAGGV-NQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVL 103 (387)
T ss_pred CHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHH
Confidence 3567777777664311 111111 1122334555554432211 022 68999999999999886
No 219
>PLN02590 probable tyrosine decarboxylase
Probab=54.93 E-value=42 Score=30.99 Aligned_cols=39 Identities=10% Similarity=0.032 Sum_probs=26.5
Q ss_pred HHHHHHHhhcCCCC--C----CcEEEeCChHHHHHHHHHHHHhcc
Q 031493 35 ECAELLLQGVGKGW--A----SRAYFSDNGSTAIEIALKMAFRKF 73 (158)
Q Consensus 35 ~LAe~L~~~~P~~~--l----~~v~f~~SGSEA~E~AlKlAR~~~ 73 (158)
++.+-|.+++.-+. + .--.|+++|||||-.||..||...
T Consensus 174 ~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~ 218 (539)
T PLN02590 174 IVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRI 218 (539)
T ss_pred HHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHH
Confidence 35555666653220 0 235778999999999999999753
No 220
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=54.52 E-value=33 Score=30.03 Aligned_cols=60 Identities=5% Similarity=-0.077 Sum_probs=31.5
Q ss_pred cHHHHHHHHHHHHhcCcc--CCC--CCCChH----HHHHHHHHHhhc--CCCCCCcEEE-eCChHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHV--MFP--ENVYEP----ALECAELLLQGV--GKGWASRAYF-SDNGSTAIEIALK 67 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~--~~~--~~~~~~----~~~LAe~L~~~~--P~~~l~~v~f-~~SGSEA~E~AlK 67 (158)
+++|.+++++.+-..... +.. ....+. ..+.-+.|.+++ |.+ . .|+| ..|||.+.|+++.
T Consensus 16 p~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~-y-~Vlfl~GggT~~~ea~~~ 86 (364)
T PRK12462 16 PDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDE-Y-GVVFLQGGSSLQFSMIPM 86 (364)
T ss_pred CHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCC-C-eEEEEeccHHHHHHHHHH
Confidence 578888887766442220 001 112222 233344444544 433 3 4555 4568999998875
No 221
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=54.01 E-value=36 Score=29.63 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=22.1
Q ss_pred HHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 35 ECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 35 ~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
++.+.+.++..-+ .+.+.++++|+++.++++.
T Consensus 116 e~~~~la~l~g~~-~~~v~~~~g~t~~~~~~~~ 147 (447)
T PRK00451 116 EYQTMICELTGMD-VANASMYDGATALAEAALM 147 (447)
T ss_pred HHHHHHHHHhCCC-cceEEecCcHHHHHHHHHH
Confidence 3445567766544 4578889999998887664
No 222
>PRK07683 aminotransferase A; Validated
Probab=53.76 E-value=76 Score=27.08 Aligned_cols=63 Identities=10% Similarity=0.042 Sum_probs=36.3
Q ss_pred cHHHHHHHHHHHHhcCc-cCCCCCCChHHHHHHHHHHhhcC--CCCCC-cEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGH-VMFPENVYEPALECAELLLQGVG--KGWAS-RAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~-~~~~~~~~~~~~~LAe~L~~~~P--~~~l~-~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+.+++.+.++.... +....-..+...++|+.+.+..+ -. .+ .+.+++++++|+..+++..
T Consensus 43 ~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-~~~~I~~t~G~~~al~~~~~~l 109 (387)
T PRK07683 43 PSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYS-PESEIIVTIGASEAIDIAFRTI 109 (387)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-CCCcEEEeCChHHHHHHHHHHh
Confidence 46788888887764211 11001112233456666643322 12 34 7899999999999988754
No 223
>PRK07671 cystathionine beta-lyase; Provisional
Probab=53.38 E-value=52 Score=28.40 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=29.4
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
..+.++...+|.++|+++.. .+.....+||+.|+.+++.
T Consensus 45 ~r~~~p~~~~Le~~lA~l~g---~~~~~~~~sG~aai~~~~~ 83 (377)
T PRK07671 45 SRTGNPTRAALEELIAVLEG---GHAGFAFGSGMAAITAVMM 83 (377)
T ss_pred CCCCChHHHHHHHHHHHHhC---CCceEEeCCHHHHHHHHHH
Confidence 35567888899999999874 3456678899999887653
No 224
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=53.38 E-value=43 Score=29.25 Aligned_cols=39 Identities=23% Similarity=0.083 Sum_probs=31.0
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
.+.++...+|.++|+++.+ .+.+...+||++|+..++..
T Consensus 60 r~~~p~~~~le~~lA~l~g---~~~~i~~ssG~~Ai~~~l~a 98 (398)
T PRK08249 60 RNTNPTVQAFEEKVRILEG---AEAATAFSTGMAAISNTLYT 98 (398)
T ss_pred CCCChHHHHHHHHHHHHhC---CCeEEEeCChHHHHHHHHHH
Confidence 5667888889999999875 34677778999999988864
No 225
>PRK06434 cystathionine gamma-lyase; Validated
Probab=52.96 E-value=30 Score=30.28 Aligned_cols=39 Identities=18% Similarity=-0.048 Sum_probs=31.8
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
...++...+|.++|+++.. -..+...+||+.|+.+|+..
T Consensus 60 r~~~P~~~~lE~~la~leg---~~~av~~sSG~aAi~~al~a 98 (384)
T PRK06434 60 RWGNPTVQAFEEKYAVLEN---AEHALSFSSGMGAITSAILS 98 (384)
T ss_pred CCCChhHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHH
Confidence 4567888899999999874 34678889999999999963
No 226
>PLN02656 tyrosine transaminase
Probab=52.82 E-value=77 Score=27.35 Aligned_cols=64 Identities=13% Similarity=0.048 Sum_probs=35.4
Q ss_pred cHHHHHHHHHHHHhcCccCCCC-CCC-hHHHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPE-NVY-EPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~-~~~-~~~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|.+.+++.+.+..-....+.. ... +....+++.+.+..+.. ..+.+++++++++|+..++...
T Consensus 50 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 116 (409)
T PLN02656 50 THVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSML 116 (409)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHH
Confidence 4778888887765421111101 111 22334555554322211 1357999999999999888754
No 227
>PRK06207 aspartate aminotransferase; Provisional
Probab=52.61 E-value=74 Score=27.44 Aligned_cols=64 Identities=14% Similarity=-0.043 Sum_probs=37.5
Q ss_pred cHHHHHHHHHHHHhcCccCCCCC--CChHHHHHHHHHHhhcCCC-CC-CcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPEN--VYEPALECAELLLQGVGKG-WA-SRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~--~~~~~~~LAe~L~~~~P~~-~l-~~v~f~~SGSEA~E~AlKlA 69 (158)
.|.+.+++.+.+.+.....+... ..+....+++.+.+..... .. +.+..++++++|++.+++.-
T Consensus 55 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l 122 (405)
T PRK06207 55 TPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAAT 122 (405)
T ss_pred CHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHh
Confidence 35677777776654211111111 1233456777776653321 03 57999999999999888754
No 228
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=52.58 E-value=50 Score=28.68 Aligned_cols=40 Identities=18% Similarity=0.048 Sum_probs=31.0
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
...++...+|.++|+++.+ .+.+...+||++|+..++...
T Consensus 49 r~~np~~~~lE~~lA~l~g---~~~~l~~~sG~~Ai~~~l~~l 88 (385)
T PRK08574 49 REENPTLRPLEEALAKLEG---GVDALAFNSGMAAISTLFFSL 88 (385)
T ss_pred CCCCccHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHH
Confidence 4567778889999999875 345666789999999998743
No 229
>PRK08114 cystathionine beta-lyase; Provisional
Probab=52.52 E-value=41 Score=29.67 Aligned_cols=39 Identities=13% Similarity=0.064 Sum_probs=31.1
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
....||....|.++|+++-+ -..++..+||..|+.+++.
T Consensus 57 sR~~nPt~~~le~~la~LEg---~~~a~~~~SGmaAi~~~~~ 95 (395)
T PRK08114 57 GRRGTLTHFSLQEAMCELEG---GAGCALYPCGAAAVANAIL 95 (395)
T ss_pred cCCCChhHHHHHHHHHHHhC---CCeEEEEhHHHHHHHHHHH
Confidence 35678888899999998753 3477777889999999885
No 230
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=52.50 E-value=90 Score=26.93 Aligned_cols=62 Identities=6% Similarity=0.049 Sum_probs=36.9
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCC-------hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVY-------EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~-------~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
.+.|.+++.+.+....... ....+ +...++-++|++...-...+.|.|+++++||+..+++.
T Consensus 45 p~~v~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~ 113 (424)
T PLN02855 45 PAAVLDALQDYYEEYNSNV-HRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAYT 113 (424)
T ss_pred CHHHHHHHHHHHHhcCCCC-CCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHH
Confidence 4668888877665432110 01111 11235556677766432125799999999999988864
No 231
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=52.08 E-value=51 Score=27.92 Aligned_cols=58 Identities=12% Similarity=0.079 Sum_probs=34.6
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|++.+++.+..+.+. .|+...-.+|-+.|++...-. -+.+.++++++|++..+++..
T Consensus 51 ~~~~~~al~~~~~~~~-----~Y~~~~g~~lr~~ia~~~~~~-~~~i~~t~G~~~~l~~~~~~~ 108 (371)
T PRK05166 51 SPAVRRAFADIAELLR-----LYPDPQGRALREAIAARTGVP-ADRIILGNGSEDLIAVICRAV 108 (371)
T ss_pred CHHHHHHHHHHHHHhh-----cCCCCcHHHHHHHHHHHhCcC-HHHEEEcCCHHHHHHHHHHHh
Confidence 3567777765443322 222211125666666665423 457999998899998877643
No 232
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=51.19 E-value=53 Score=28.18 Aligned_cols=29 Identities=14% Similarity=-0.056 Sum_probs=18.5
Q ss_pred HHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 39 LLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 39 ~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+..+.. ...+++ +||++|++.+++..
T Consensus 79 ~la~~~g~~-~~~i~~-~sgt~al~~~l~~l 107 (416)
T PRK00011 79 RAKELFGAE-YANVQP-HSGSQANAAVYFAL 107 (416)
T ss_pred HHHHHhCCC-ceeeec-CCchHHHHHHHHHh
Confidence 556666533 333444 67999999888654
No 233
>PRK07503 methionine gamma-lyase; Provisional
Probab=50.82 E-value=31 Score=30.08 Aligned_cols=39 Identities=15% Similarity=-0.033 Sum_probs=30.2
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
.+.++...+|.++|+++.+. +....++||++|++.+++.
T Consensus 61 r~~~p~~~~le~~lA~l~g~---~~~i~~~sG~~Al~~~l~~ 99 (403)
T PRK07503 61 RISNPTLALLEQRMASLEGG---EAAVALASGMGAITATLWT 99 (403)
T ss_pred CCCCchHHHHHHHHHHHhCC---CcEEEEcCHHHHHHHHHHH
Confidence 45677788898999988753 3456677999999999873
No 234
>PRK06767 methionine gamma-lyase; Provisional
Probab=50.76 E-value=32 Score=29.74 Aligned_cols=38 Identities=18% Similarity=0.020 Sum_probs=29.6
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
.+.++...+|.++|+++.+ .....+.+||++|+.+++.
T Consensus 57 r~~~pt~~~Le~~lA~l~G---~~~al~~~sG~~Ai~~~l~ 94 (386)
T PRK06767 57 RLGNPTVKLFEERMAVLEG---GEEALAFGSGMAAISATLI 94 (386)
T ss_pred CCCCcchHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHH
Confidence 4567778889999999875 3456777899999888774
No 235
>PRK08064 cystathionine beta-lyase; Provisional
Probab=49.86 E-value=64 Score=27.98 Aligned_cols=38 Identities=13% Similarity=0.166 Sum_probs=28.5
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
...++...+|.++|+++.+. +.....+||+.|+++++.
T Consensus 50 r~~~p~~~~le~~lA~l~g~---~~~v~~~sG~~ai~~~l~ 87 (390)
T PRK08064 50 RSGNPTREALEDIIAELEGG---TKGFAFASGMAAISTAFL 87 (390)
T ss_pred CCCChhHHHHHHHHHHHhCC---CCeEEECCHHHHHHHHHH
Confidence 34567778899999988753 345556899999998885
No 236
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=49.15 E-value=85 Score=26.71 Aligned_cols=65 Identities=8% Similarity=-0.066 Sum_probs=36.0
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCC--C-CC-CcEEEeCChHHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGK--G-WA-SRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~--~-~l-~~v~f~~SGSEA~E~AlKlAR 70 (158)
.|.+.+++++.+..+..+....-..+....+|+.+.+.... + .. +.+..++++++|+..++++..
T Consensus 43 ~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~ 111 (393)
T TIGR03538 43 PAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVI 111 (393)
T ss_pred CHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHc
Confidence 46788888876654322211011123344566666543111 0 12 358888888999999888643
No 237
>PRK05764 aspartate aminotransferase; Provisional
Probab=49.04 E-value=82 Score=26.62 Aligned_cols=63 Identities=11% Similarity=-0.056 Sum_probs=35.7
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCC--ChHHHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENV--YEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~--~~~~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|++.+++.+.++.... .+.... .+....+|+.+.+..+-+ ..+.+++++++++|+..+++..
T Consensus 46 ~~~~~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~ 111 (393)
T PRK05764 46 PEHIKEAAIEALDDGKT-KYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMAL 111 (393)
T ss_pred CHHHHHHHHHHHhcCCC-CcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHh
Confidence 57888888877654211 111111 122344555554332211 0246899999999999988765
No 238
>PLN02187 rooty/superroot1
Probab=48.78 E-value=62 Score=28.75 Aligned_cols=59 Identities=8% Similarity=-0.002 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhcCccCCCCC-CC----hHHHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHHH
Q 031493 8 ELARDMGYTAARFGHVMFPEN-VY----EPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 8 ~Iv~Av~eQl~~l~~~~~~~~-~~----~~~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKlA 69 (158)
++.+++.+.++.-.. ..| +. +....+|+.+.+..+.+ ..+.|+++++++||++.+++.-
T Consensus 87 ~~~~~~~~~~~~~~~---~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l 151 (462)
T PLN02187 87 EAEDAVVDVLRSGKG---NSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESL 151 (462)
T ss_pred HHHHHHHHHHhCCCC---CCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHh
Confidence 577888776654221 122 11 22334555544322211 1357999999999999988744
No 239
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=48.66 E-value=71 Score=27.97 Aligned_cols=41 Identities=17% Similarity=0.111 Sum_probs=29.7
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
..+.++...+|.++|+++.+. .....++||++|+.+++...
T Consensus 55 ~R~~~p~~~~Le~~lA~l~g~---~~~v~~~sG~~Ai~~~l~al 95 (405)
T PRK08776 55 TRSGNPTRDLLGEALAELEGG---AGGVITATGMGAINLVLNAL 95 (405)
T ss_pred cCCCChHHHHHHHHHHHHhCC---CceEEEcCHHHHHHHHHHHH
Confidence 355677778899999987642 34566778999998877643
No 240
>PRK07049 methionine gamma-lyase; Validated
Probab=48.48 E-value=67 Score=28.37 Aligned_cols=41 Identities=20% Similarity=0.045 Sum_probs=31.6
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
..+.++....|.++|+++.. -+.++.++||++|+.+++...
T Consensus 78 ~R~~~Pt~~~Le~~lA~leg---~~~~iv~~sG~~Ai~~~l~al 118 (427)
T PRK07049 78 SRFNHPNSEIVEDRLAVYEG---AESAALFSSGMSAIATTLLAF 118 (427)
T ss_pred cCCCCcCHHHHHHHHHHHhC---CCcEEEEccHHHHHHHHHHHH
Confidence 35667777889999999864 346788899999998888543
No 241
>PRK06107 aspartate aminotransferase; Provisional
Probab=48.35 E-value=87 Score=26.85 Aligned_cols=62 Identities=11% Similarity=-0.066 Sum_probs=37.3
Q ss_pred cHHHHHHHHHHHHhcCccCCCCC--CChHHHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPEN--VYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~--~~~~~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKl 68 (158)
.|.+.+++.+.+++... ..... ..+....+++.+.+..+.. ..+.+.+++++++|+..+++.
T Consensus 48 ~~~~~~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 112 (402)
T PRK06107 48 PDHIKQAAVAAIERGET-KYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMA 112 (402)
T ss_pred CHHHHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHH
Confidence 57788888887764211 11111 1233455667666543321 135689999899999999863
No 242
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=48.06 E-value=69 Score=28.77 Aligned_cols=64 Identities=9% Similarity=-0.004 Sum_probs=34.9
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+++++++.+++.....+....-..+....+|+.+.+.-..+ ..+.|+.+++++||+..+++.-
T Consensus 164 p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l 228 (517)
T PRK13355 164 PDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSAL 228 (517)
T ss_pred CHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHh
Confidence 456888888776543221100001122344555543321111 1457999999999999988743
No 243
>PRK08363 alanine aminotransferase; Validated
Probab=47.40 E-value=96 Score=26.44 Aligned_cols=64 Identities=6% Similarity=-0.111 Sum_probs=34.2
Q ss_pred cHHHHHHHHHHHHhcC-ccCCCCCCChHHHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFG-HVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~-~~~~~~~~~~~~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|.+.+++.+.+.... .+....-..+....+++.+.+..+-+ ..+.+.+++++++|+..+++..
T Consensus 48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~ 113 (398)
T PRK08363 48 PEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGAL 113 (398)
T ss_pred CHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHh
Confidence 5678888887765321 11100011122333444443321211 1357899999999999988754
No 244
>PRK08361 aspartate aminotransferase; Provisional
Probab=47.28 E-value=74 Score=27.08 Aligned_cols=63 Identities=11% Similarity=-0.029 Sum_probs=34.6
Q ss_pred cHHHHHHHHHHHHhcC-ccCCCCCCChHHHHHHHHHHhhcC--CCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFG-HVMFPENVYEPALECAELLLQGVG--KGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~-~~~~~~~~~~~~~~LAe~L~~~~P--~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+.+++++.++... .+....-..+....+|+.+.+..+ -. .+.++++++|++|+.++++..
T Consensus 48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l 113 (391)
T PRK08361 48 PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVD-VDNVIVTAGAYEATYLAFESL 113 (391)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-cccEEEeCChHHHHHHHHHHh
Confidence 4667778777655321 111000111223345555543222 12 357999999999999988754
No 245
>PRK07582 cystathionine gamma-lyase; Validated
Probab=47.13 E-value=62 Score=27.76 Aligned_cols=38 Identities=18% Similarity=0.083 Sum_probs=28.7
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
.+.++...+|.++|+++. + ..+.+..||++|+.+++..
T Consensus 47 ry~~p~~~~Le~~lA~l~--~--~~~v~~~sG~~Ai~~~l~a 84 (366)
T PRK07582 47 RASNPTWRALEAALGELE--G--AEALVFPSGMAAITAVLRA 84 (366)
T ss_pred CCCCccHHHHHHHHHHHc--C--CCEEEECCHHHHHHHHHHH
Confidence 466777888999999987 2 2455568899999988743
No 246
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=46.95 E-value=43 Score=30.66 Aligned_cols=22 Identities=27% Similarity=0.296 Sum_probs=19.4
Q ss_pred EEEeCChHHHHHHHHHHHHhcc
Q 031493 52 AYFSDNGSTAIEIALKMAFRKF 73 (158)
Q Consensus 52 v~f~~SGSEA~E~AlKlAR~~~ 73 (158)
-.|+++|||||-.|+..||...
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~ 183 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRL 183 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHh
Confidence 5778999999999999999753
No 247
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=46.53 E-value=77 Score=26.89 Aligned_cols=59 Identities=7% Similarity=-0.053 Sum_probs=33.4
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcC--------CCCCCcEEEeCChHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVG--------KGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P--------~~~l~~v~f~~SGSEA~E~AlK 67 (158)
.|.+.+++++.++...... .|+.....+|-+.|++... -. .+.+..+++++||+..++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~--~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~-~~~I~it~Ga~~al~~~~~ 109 (374)
T PRK02610 43 PPDLKQKLAWLYQQGIESN--RYPDGGHEALKQAIAEYVNESAAGSSQIT-PANISVGNGSDELIRSLLI 109 (374)
T ss_pred CHHHHHHHHHHHhhccccc--CCCCCchHHHHHHHHHHhCccccccCCCC-HHHEEEcCChHHHHHHHHH
Confidence 4678888887665421111 2222222334444544432 12 3568889988999987765
No 248
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=46.52 E-value=1.2e+02 Score=25.36 Aligned_cols=63 Identities=6% Similarity=-0.117 Sum_probs=34.4
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcC--CCCCC-cEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVG--KGWAS-RAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P--~~~l~-~v~f~~SGSEA~E~AlKlA 69 (158)
.|++.+++++....+..+....-..+....+++.+.+... -+ .+ .+.+++++++|...++...
T Consensus 15 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-~~~~Iiit~Gs~~ai~~~~~~~ 80 (350)
T TIGR03537 15 PPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLD-PDAQVLPSAGSKEAIFHFPLVF 80 (350)
T ss_pred CHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-CCCcEEEcCChHHHHHHHHHHH
Confidence 4678888887754332211000011223445555543312 12 33 7899998899998876543
No 249
>PRK03321 putative aminotransferase; Provisional
Probab=46.47 E-value=72 Score=26.55 Aligned_cols=56 Identities=11% Similarity=0.017 Sum_probs=33.3
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
.|.+.+++.+.++.+.. ++.+...++-+.+++...-. .+.+.++++.++++..++.
T Consensus 37 ~~~~~~a~~~~~~~~~~-----y~~~g~~~lr~~ia~~~~~~-~~~I~~~~G~~~~l~~~~~ 92 (352)
T PRK03321 37 LPSVRAAIARAAAGVNR-----YPDMGAVELRAALAEHLGVP-PEHVAVGCGSVALCQQLVQ 92 (352)
T ss_pred CHHHHHHHHHHHHhcCc-----CCCCcHHHHHHHHHHHhCcC-HHHEEECCCHHHHHHHHHH
Confidence 35788888776654332 22233445666666665322 3578887766777776665
No 250
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=45.76 E-value=76 Score=27.12 Aligned_cols=57 Identities=9% Similarity=0.020 Sum_probs=34.7
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|.+.+++.+ ...+. .++.+...+|-+.|++...-+ .+.|.++++++|++..+++..
T Consensus 67 ~~~v~~a~~~-~~~~~-----~Yp~~~~~~lr~~ia~~~~~~-~~~I~~t~Ga~~~i~~~~~~~ 123 (380)
T PLN03026 67 PPEVLEALGN-MKFPY-----VYPDPESRRLRAALAEDSGLE-SENILVGCGADELIDLLMRCV 123 (380)
T ss_pred CHHHHHHHHh-hHhhc-----cCCCCCHHHHHHHHHHHhCcC-hhhEEEcCCHHHHHHHHHHHh
Confidence 4667777654 21111 233333455667777765423 467999998999999887643
No 251
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=45.19 E-value=30 Score=30.45 Aligned_cols=22 Identities=9% Similarity=-0.018 Sum_probs=16.4
Q ss_pred CCCCCcHHHHHHHHHHHHhcCc
Q 031493 1 MFRWFQIELARDMGYTAARFGH 22 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~eQl~~l~~ 22 (158)
++||-||++++.+.+-++.+.+
T Consensus 40 ~lgh~sPe~~qIm~~v~egiky 61 (385)
T KOG2862|consen 40 SLGHMSPEFVQIMDEVLEGIKY 61 (385)
T ss_pred ccccCCHHHHHHHHHHHHHHHH
Confidence 4789999988888877665443
No 252
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=45.05 E-value=95 Score=26.76 Aligned_cols=21 Identities=24% Similarity=0.188 Sum_probs=17.6
Q ss_pred CCcEEEeCChHHHHHHHHHHH
Q 031493 49 ASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 49 l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+.++++++||+..+++..
T Consensus 104 ~~~i~it~G~~~al~~~~~~~ 124 (412)
T PTZ00433 104 KDNVVLCSGVSHAILMALTAL 124 (412)
T ss_pred hhhEEEeCChHHHHHHHHHHh
Confidence 357899999999999998854
No 253
>PRK08912 hypothetical protein; Provisional
Probab=45.02 E-value=1.1e+02 Score=25.97 Aligned_cols=61 Identities=13% Similarity=0.068 Sum_probs=34.2
Q ss_pred cHHHHHHHHHHHHhcCccCCCCC--CChHHHHHHHHHHhhcC--CCCCC-cEEEeCChHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPEN--VYEPALECAELLLQGVG--KGWAS-RAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~--~~~~~~~LAe~L~~~~P--~~~l~-~v~f~~SGSEA~E~AlKl 68 (158)
+|.+.+++.+.+.... ..+... ..+....+++.+.+..+ -. .+ .+.+++++++|+.+++..
T Consensus 41 p~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-~~~~i~~t~G~~~al~~~~~~ 106 (387)
T PRK08912 41 PEDVRRAAADALLDGS-NQYPPMMGLPELRQAVAAHYARFQGLDLD-PETEVMVTSGATEALAAALLA 106 (387)
T ss_pred CHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCC-CcccEEEeCCcHHHHHHHHHH
Confidence 5778888877664311 111111 12233445555544221 12 34 789999999999888764
No 254
>PRK05839 hypothetical protein; Provisional
Probab=44.72 E-value=1.1e+02 Score=26.10 Aligned_cols=63 Identities=2% Similarity=-0.189 Sum_probs=34.1
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcC--CCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVG--KGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P--~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+.+++.+..+.+..+....-..+....+|+.+.+..+ -. .+.++.++++++|...++++.
T Consensus 39 ~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~-~~~I~it~G~~~al~~~~~~~ 103 (374)
T PRK05839 39 PKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELK-ENELIPTFGTREVLFNFPQFV 103 (374)
T ss_pred CHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-cceEEEecCcHHHHHHHHHHH
Confidence 3567777776654322221100111333456666655422 12 457888888898888776643
No 255
>PRK06234 methionine gamma-lyase; Provisional
Probab=44.69 E-value=44 Score=29.05 Aligned_cols=38 Identities=21% Similarity=0.087 Sum_probs=30.7
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
.+.++...+|.++|++... .+.+..++||++|+..++.
T Consensus 60 r~~~p~~~~Le~~iA~~~g---~~~~l~~~sG~~Ai~~al~ 97 (400)
T PRK06234 60 RLGNPTSTEVENKLALLEG---GEAAVVAASGMGAISSSLW 97 (400)
T ss_pred CCCCccHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHH
Confidence 4567778899999999875 3467888999999998875
No 256
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=44.60 E-value=59 Score=27.78 Aligned_cols=63 Identities=13% Similarity=-0.016 Sum_probs=33.7
Q ss_pred cHHHHHHHHHHHHhcCccCCCCC-CC-hHHHHHHHHHHhhc-CCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPEN-VY-EPALECAELLLQGV-GKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~-~~-~~~~~LAe~L~~~~-P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+.+++++.++.......... .. +....+|+.+.+.- +-. .+.+.+++++++|+..++...
T Consensus 50 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~-~~~i~~t~G~~~al~~~~~~l 115 (401)
T TIGR01264 50 DPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIE-ADDVVLCSGCSHAIEMCIAAL 115 (401)
T ss_pred CHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCC-HHHEEECcChHHHHHHHHHHh
Confidence 46788888776654211111001 11 12233444443210 011 357889999999999988754
No 257
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=43.98 E-value=88 Score=26.97 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=28.9
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
...++...+|.++|.++.. .+.+.+.+||+.|+.+++.
T Consensus 43 r~~~p~~~~le~~la~l~g---~~~~l~~~sG~~al~~~l~ 80 (378)
T TIGR01329 43 RSGNPTRTALESLLAKLDK---ADRAFAFSSGMAALDVITR 80 (378)
T ss_pred CCCChHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHH
Confidence 3456778889999999874 3567777899999887665
No 258
>PRK08960 hypothetical protein; Provisional
Probab=42.81 E-value=1.2e+02 Score=25.79 Aligned_cols=63 Identities=14% Similarity=0.023 Sum_probs=35.5
Q ss_pred cHHHHHHHHHHHHhcCc-cCCCCCCChHHHHHHHHHHhhcC--CCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGH-VMFPENVYEPALECAELLLQGVG--KGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~-~~~~~~~~~~~~~LAe~L~~~~P--~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+.+++.+.+..... +....-..+....+|+.+.+..+ -. .+.+.++++++||+..+++.-
T Consensus 47 ~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~it~G~~~al~~~~~~~ 112 (387)
T PRK08960 47 AEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVD-PERILVTPGGSGALLLASSLL 112 (387)
T ss_pred CHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCC-hhhEEEccCcHHHHHHHHHHh
Confidence 46788888877653211 11001112233445555543211 12 467999999999999988643
No 259
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=42.40 E-value=1.8e+02 Score=24.66 Aligned_cols=64 Identities=6% Similarity=-0.075 Sum_probs=36.3
Q ss_pred cHHHHHHHHHHHHhcCcc-CCCCCC-----ChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHV-MFPENV-----YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~-~~~~~~-----~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+++|+.+.++..... ...... .+...++-+.|+++...+..+.++|+++++||+..+++..
T Consensus 31 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~ 100 (403)
T TIGR01979 31 PQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSW 100 (403)
T ss_pred CHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHh
Confidence 467788887665442111 100010 1123355566666654221247999999999998887654
No 260
>smart00542 FYRC "FY-rich" domain, C-terminal region. is sometimes closely juxtaposed with the N-terminal region (FYRN), but sometimes is far distant. Unknown function, but occurs frequently in chromatin-associated proteins.
Probab=42.05 E-value=17 Score=25.14 Aligned_cols=14 Identities=14% Similarity=0.162 Sum_probs=12.2
Q ss_pred CCCCCcHHHHHHHH
Q 031493 1 MFRWFQIELARDMG 14 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~ 14 (158)
|||..||.|+..++
T Consensus 52 mFGls~p~V~~lie 65 (86)
T smart00542 52 MFGLSSPAVVKLIE 65 (86)
T ss_pred HhCCCcHHHHHHHH
Confidence 79999999998874
No 261
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=41.93 E-value=33 Score=28.77 Aligned_cols=39 Identities=10% Similarity=0.007 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHHH
Q 031493 31 EPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 31 ~~~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKlA 69 (158)
+...++.++|.+++... ..+.+.++.|||++++.++.-.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l 76 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSL 76 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhc
Confidence 34556667777766432 0245778999999999988754
No 262
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=41.34 E-value=1.3e+02 Score=26.12 Aligned_cols=59 Identities=8% Similarity=0.067 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcC-CCCCCcEEEeCChHHHHHHHHHHHHh
Q 031493 7 IELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVG-KGWASRAYFSDNGSTAIEIALKMAFR 71 (158)
Q Consensus 7 P~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P-~~~l~~v~f~~SGSEA~E~AlKlAR~ 71 (158)
|++.+++++.++.+. .|+.+...+|-+.+.+... .. .+.|+.+|...|.++..++....
T Consensus 38 ~~~~~~~~~~~~~~~-----rYPd~~~~~l~~a~a~~~~~~~-~~~V~~gnGsde~i~~l~~~~~~ 97 (356)
T COG0079 38 PKVIEAIRAALDKLN-----RYPDPDYRELRAALAEYYGVVD-PENVLVGNGSDELIELLVRAFVE 97 (356)
T ss_pred HHHHHHHHHHHHhhc-----cCCCCcHHHHHHHHHHHhCCCC-cceEEEcCChHHHHHHHHHHhhc
Confidence 788888888776432 4555556677777877665 33 46888889889999988876663
No 263
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=41.17 E-value=62 Score=27.80 Aligned_cols=62 Identities=8% Similarity=0.057 Sum_probs=34.7
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCC-----CChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMFPEN-----VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~-----~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
-++.+.+++.+.++.......... ......+..+++ +++.-. .+.+.|++|+||++..+++-
T Consensus 39 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~~-~~~v~~~~~~t~~l~~~~~~ 105 (406)
T TIGR01814 39 MPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLVGAK-EDEVVVMNTLTINLHLLLAS 105 (406)
T ss_pred CcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-cccCCC-CCcEEEeCCchHHHHHHHHH
Confidence 357788888876655321110010 111112222334 444433 46799999999999998874
No 264
>PRK05957 aspartate aminotransferase; Provisional
Probab=40.90 E-value=1.5e+02 Score=25.20 Aligned_cols=64 Identities=11% Similarity=-0.041 Sum_probs=37.0
Q ss_pred cHHHHHHHHHHHHhcCccCCCCC--CChHHHHHHHHHHhhcCCC-C-CCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPEN--VYEPALECAELLLQGVGKG-W-ASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~--~~~~~~~LAe~L~~~~P~~-~-l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+.+|+++.++.......... ..+....+++.|.+..+-. . .+.+++++++++|+..++...
T Consensus 42 ~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~ 109 (389)
T PRK05957 42 PPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAI 109 (389)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHh
Confidence 46788888876654322111111 1233456777776654421 0 246888888889998877644
No 265
>PRK05939 hypothetical protein; Provisional
Probab=40.88 E-value=1.2e+02 Score=26.38 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=31.0
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
....++...+|.++|+++.+. ......+||..|+.+++...
T Consensus 42 ~r~g~p~~~~lE~~la~leg~---~~~v~~ssG~~Ai~~~l~al 82 (397)
T PRK05939 42 ARQGTPTTAALEAKITKMEGG---VGTVCFATGMAAIAAVFLTL 82 (397)
T ss_pred CCCCCHHHHHHHHHHHHHhCC---CeEEEeCCHHHHHHHHHHHH
Confidence 345678888999999998653 34566678999999888643
No 266
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=40.05 E-value=62 Score=28.04 Aligned_cols=40 Identities=15% Similarity=0.054 Sum_probs=29.7
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.++...+|.++|++... .+.....+||++|+.++++..
T Consensus 57 r~~~p~~~~Le~~lA~~~g---~~~~i~~~sG~~Ai~~~l~al 96 (388)
T PRK07811 57 RTGNPTRTALEEQLAALEG---GAYGRAFSSGMAATDCLLRAV 96 (388)
T ss_pred CCCCccHHHHHHHHHHHhC---CCceEEeCCHHHHHHHHHHHH
Confidence 4456677889999998864 234455579999999998754
No 267
>PLN00175 aminotransferase family protein; Provisional
Probab=40.04 E-value=1.5e+02 Score=25.63 Aligned_cols=62 Identities=10% Similarity=-0.146 Sum_probs=34.4
Q ss_pred cHHHHHHHHHHHHhc-CccCCCCCCC-hHHHHHHHHHHhhcCCC-CCC-cEEEeCChHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARF-GHVMFPENVY-EPALECAELLLQGVGKG-WAS-RAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l-~~~~~~~~~~-~~~~~LAe~L~~~~P~~-~l~-~v~f~~SGSEA~E~AlKl 68 (158)
.|.+.+++.+.+++. ..+.. .... +....+++.+.+..+-. ..+ .+..++++++|+..++..
T Consensus 69 ~~~~~~~~~~~~~~~~~~Y~~-~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~ 134 (413)
T PLN00175 69 PDFVKEAAIQAIRDGKNQYAR-GFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILG 134 (413)
T ss_pred CHHHHHHHHHHHhcCCCCcCC-CCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHH
Confidence 467788888777652 11110 1112 23344666665432211 023 588888889999988873
No 268
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=39.96 E-value=58 Score=28.63 Aligned_cols=56 Identities=11% Similarity=-0.038 Sum_probs=35.6
Q ss_pred CcHHHHHHHHHHHHhcCcc-C---CCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHH
Q 031493 5 FQIELARDMGYTAARFGHV-M---FPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIE 63 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~-~---~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E 63 (158)
+||+|.+|..+.+++..-- . +..-+...-.+|-.+|++.-.. .......|+-+||.
T Consensus 82 shPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~r---ED~ilypscfdANa 141 (417)
T KOG1359|consen 82 SHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGR---EDTILYPSCFDANA 141 (417)
T ss_pred CChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCC---CceEEeccccccch
Confidence 5999999999988874321 1 1111334455677888887643 34555677777773
No 269
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=39.92 E-value=77 Score=28.29 Aligned_cols=35 Identities=11% Similarity=0.116 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 32 PALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 32 ~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
...+|-+.+.+..+ .+.+..++||++|+..|++.-
T Consensus 54 g~~~Leeaia~~~g---~~~vv~t~~Gt~Al~la~~al 88 (431)
T cd00617 54 SFYDLEDAVQDLFG---FKHIIPTHQGRGAENILFSIL 88 (431)
T ss_pred CHHHHHHHHHHHHC---CCeEEEcCCHHHHHHHHHHHh
Confidence 35678888888875 568999999999999998643
No 270
>PRK05967 cystathionine beta-lyase; Provisional
Probab=39.83 E-value=1.1e+02 Score=27.03 Aligned_cols=38 Identities=8% Similarity=0.042 Sum_probs=27.6
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
...++....|.++|..+-. + ....+..||++|+.+++.
T Consensus 60 R~gnPt~~~Le~~la~le~-~--~~~v~~sSG~aAi~~~l~ 97 (395)
T PRK05967 60 TRGTPTTDALCKAIDALEG-S--AGTILVPSGLAAVTVPFL 97 (395)
T ss_pred CCCChHHHHHHHHHHHHhC-C--CCEEEECcHHHHHHHHHH
Confidence 4567888889999987643 2 234556679999999884
No 271
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=39.66 E-value=44 Score=29.36 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 31 EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 31 ~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
+...+|-++.+++++. .-..|+.||+-.|-.||+.=.
T Consensus 56 ~tt~rLE~~vA~l~GK---EAgLFv~SGTmgNllaIm~Hc 92 (384)
T KOG1368|consen 56 PTTNRLEQRVAELFGK---EAGLFVPSGTMGNLLAIMVHC 92 (384)
T ss_pred ccHHHHHHHHHHHhCc---cceeeecccccccHHHHHHHh
Confidence 4467788899998863 478899999999999997433
No 272
>PRK08354 putative aminotransferase; Provisional
Probab=39.28 E-value=1.5e+02 Score=24.44 Aligned_cols=53 Identities=11% Similarity=-0.067 Sum_probs=35.8
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
..|.+++++.+.++.+. .++. ...|.+.+++..+ +.+..+++++||+..++.+
T Consensus 21 ~p~~~~~a~~~~~~~~~-----~yp~--~~~l~~~ia~~~~----~~I~vt~G~~~al~~~~~~ 73 (311)
T PRK08354 21 PPEWLDEMFERAKEISG-----RYTY--YEWLEEEFSKLFG----EPIVITAGITEALYLIGIL 73 (311)
T ss_pred CCHHHHHHHHHHHHHhh-----cCCC--hHHHHHHHHHHHC----CCEEECCCHHHHHHHHHHh
Confidence 46888999887665432 2332 2456677777664 3688899999999877643
No 273
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=39.23 E-value=1e+02 Score=27.57 Aligned_cols=54 Identities=9% Similarity=-0.004 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHhcCccCCCCC-CChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 8 ELARDMGYTAARFGHVMFPEN-VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 8 ~Iv~Av~eQl~~l~~~~~~~~-~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
.+.+++.+.+..-. ..| ......+|-|++++... .+.+.++++|++|+..++..
T Consensus 58 a~~~a~~~a~~~g~----~~Y~~~~g~~~Lreaia~~~~---~~~vv~t~ggt~A~~~~~~a 112 (460)
T PRK13238 58 AMSDRQWAAMMRGD----EAYAGSRSYYRLEDAVKDIFG---YPYTIPTHQGRAAEQILFPV 112 (460)
T ss_pred hhhHHHHHHHHhCC----cccCCCCCHHHHHHHHHHHhC---CCcEEECCCHHHHHHHHHHH
Confidence 35666666654321 122 23345667788888774 45789999999999998764
No 274
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=38.84 E-value=1.3e+02 Score=25.98 Aligned_cols=20 Identities=20% Similarity=0.056 Sum_probs=16.5
Q ss_pred CcEEEeCChHHHHHHHHHHH
Q 031493 50 SRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 50 ~~v~f~~SGSEA~E~AlKlA 69 (158)
+.+..+++++||...+++..
T Consensus 142 ~~Iiit~G~~~al~~~~~~l 161 (431)
T PRK15481 142 FEIDLTSGAIDAIERLLCAH 161 (431)
T ss_pred CeEEEecCcHHHHHHHHHHh
Confidence 47889999999999888743
No 275
>PRK09265 aminotransferase AlaT; Validated
Probab=38.74 E-value=1.5e+02 Score=25.36 Aligned_cols=62 Identities=13% Similarity=0.016 Sum_probs=32.2
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCC-hHHHHHHHHHHhhc--CCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVY-EPALECAELLLQGV--GKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~-~~~~~LAe~L~~~~--P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|++.+++.+.+.....+.. .... +....+|+.+...- +-. .+.+.+++++++++..+++..
T Consensus 51 ~~~i~~~~~~~~~~~~~Y~~-~~G~~~lr~~ia~~~~~~~~~~~~-~~~i~~t~G~~~~l~~~~~~~ 115 (404)
T PRK09265 51 PDEILRDVIRNLPTAQGYSD-SKGLFSARKAIMQYYQQKGIPDVD-VDDIYIGNGVSELIVMAMQAL 115 (404)
T ss_pred CHHHHHHHHHHhhcCCCCCC-CCCcHHHHHHHHHHHhccCCCCCC-cccEEEeCChHHHHHHHHHHh
Confidence 45677887766543211110 0111 22233444442210 112 357899998899999888754
No 276
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=38.64 E-value=83 Score=26.66 Aligned_cols=63 Identities=13% Similarity=-0.012 Sum_probs=31.6
Q ss_pred CcHHHHHHHHHHHH-hcCc--cCCCCC-CC---hHHHHHH-HHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAA-RFGH--VMFPEN-VY---EPALECA-ELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~-~l~~--~~~~~~-~~---~~~~~LA-e~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
-+|+|.+|+.+.+. +... .+...+ .. +...+++ +.+.++.... ...+ +.+||++|++.+++.-
T Consensus 31 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~-~~~v-~~~sgt~a~~~~l~~l 101 (402)
T cd00378 31 TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE-YANV-QPHSGSQANLAVYFAL 101 (402)
T ss_pred CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC-ceee-ecCCcHHHHHHHHHHh
Confidence 47888888876542 2111 010011 11 1223332 3344555432 2233 3457999999888754
No 277
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=38.59 E-value=69 Score=26.27 Aligned_cols=38 Identities=21% Similarity=0.325 Sum_probs=25.7
Q ss_pred CChHHHHHHHHHHhhcCCCCCCcEEE-eCChHHHHHHHHHHH
Q 031493 29 VYEPALECAELLLQGVGKGWASRAYF-SDNGSTAIEIALKMA 69 (158)
Q Consensus 29 ~~~~~~~LAe~L~~~~P~~~l~~v~f-~~SGSEA~E~AlKlA 69 (158)
+.....++-++++++.. .+.++| ++++++|+.+++...
T Consensus 57 ~~g~i~~~~~~~A~~~g---a~~~~~~~~Gst~a~~~~l~al 95 (294)
T cd00615 57 PTGPIKEAQELAARAFG---AKHTFFLVNGTSSSNKAVILAV 95 (294)
T ss_pred CChHHHHHHHHHHHHhC---CCCEEEEcCcHHHHHHHHHHHc
Confidence 34445666677777764 345665 777789999988654
No 278
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=38.19 E-value=1.7e+02 Score=24.95 Aligned_cols=63 Identities=6% Similarity=-0.044 Sum_probs=34.6
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcC---CCCC-CcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVG---KGWA-SRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P---~~~l-~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+.+++.+.++.+..+....-..+....+|+.+.+..+ -. . +.|..++++++|+..+++..
T Consensus 44 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~~~i~it~G~~~al~~~~~~l 110 (396)
T PRK09147 44 PAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALD-PATQVLPVNGSREALFAFAQTV 110 (396)
T ss_pred CHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCC-ccceEEECCChHHHHHHHHHHH
Confidence 4567778776654332211000012233456666544322 11 2 36888898999999888744
No 279
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=37.81 E-value=68 Score=27.93 Aligned_cols=39 Identities=15% Similarity=0.047 Sum_probs=29.9
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
.+.++...+|.++|+++.. .+....++||+.|+..++..
T Consensus 61 r~~~p~~~~Le~~lA~l~G---~~~~~~~~sG~~Ai~~~l~~ 99 (398)
T PRK07504 61 RYSNPTVDMFEKRMCALEG---AEDARATASGMAAVTAAILC 99 (398)
T ss_pred cCCCchHHHHHHHHHHHhC---CCeeeEecCHHHHHHHHHHH
Confidence 4567778889999999874 34555678999999887753
No 280
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=37.63 E-value=1.7e+02 Score=24.86 Aligned_cols=64 Identities=8% Similarity=-0.010 Sum_probs=33.6
Q ss_pred cHHHHHHHHHHHHhc-CccCCCCCCChHHHHHHHHHHhhcCCC--CCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARF-GHVMFPENVYEPALECAELLLQGVGKG--WASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l-~~~~~~~~~~~~~~~LAe~L~~~~P~~--~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.+.+.+++.+.++.- ..+....-..+....+++.+....+-. .-+.|+++++|++|++++++..
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~ 111 (391)
T PRK07309 45 PDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAI 111 (391)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHh
Confidence 356777777665431 111100001122334555554322211 0257999999999999988754
No 281
>PRK07324 transaminase; Validated
Probab=36.72 E-value=1.2e+02 Score=25.79 Aligned_cols=58 Identities=9% Similarity=-0.081 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcCC-CCCCcEEEeCChHHHHHHHHHHH
Q 031493 7 IELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGK-GWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 7 P~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P~-~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
+.+ +|+.+++++... .+.. ..-..+|-+.+++.... + .+.|.+++++++|+..++...
T Consensus 42 ~~~-~~~~~~~~~~~~-~Y~~--~~G~~~lr~~ia~~~~~~~-~~~vi~t~G~~~al~~~~~~l 100 (373)
T PRK07324 42 KNP-EAFYQELGQKKL-TYGW--IEGSPEFKEAVASLYQNVK-PENILQTNGATGANFLVLYAL 100 (373)
T ss_pred cch-HHHHHHHhcCCc-cCCC--CCCCHHHHHHHHHHhcCCC-hhhEEEcCChHHHHHHHHHHh
Confidence 345 677777665322 1111 11122444555554321 2 368999999999999988644
No 282
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=36.59 E-value=1.6e+02 Score=25.36 Aligned_cols=63 Identities=11% Similarity=0.034 Sum_probs=34.9
Q ss_pred cHHHHHHHHHHHHhcCc--cCCCCCCChHHHHHHHHHHhhcC--CCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGH--VMFPENVYEPALECAELLLQGVG--KGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~--~~~~~~~~~~~~~LAe~L~~~~P--~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|.+.+++.+.++.... +....-..+....+|+.+.+..+ -. .+.+.++++++||+..+++..
T Consensus 51 p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-~~~I~it~G~~~al~~~~~~l 117 (409)
T PLN00143 51 TNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLS-PDDVYLTLGCKHAAEIIIKVL 117 (409)
T ss_pred CHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-HhhEEEecChHHHHHHHHHHH
Confidence 35677888877654211 11001112233445555543221 12 357999999999999988744
No 283
>PRK07550 hypothetical protein; Provisional
Probab=35.30 E-value=1.9e+02 Score=24.43 Aligned_cols=65 Identities=14% Similarity=0.006 Sum_probs=35.5
Q ss_pred cHHHHHHHHHHHHhcCccCCCCC-CChH-HHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPEN-VYEP-ALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~-~~~~-~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
.+.+.+++.+.+.......+... ..+. ...+++.+.+..... ..+.+++++++++|+..+++...
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 111 (386)
T PRK07550 44 PPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLA 111 (386)
T ss_pred CHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhc
Confidence 35677777766532111111111 1222 345666666542211 13578999888999998887653
No 284
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=34.48 E-value=1.3e+02 Score=26.47 Aligned_cols=41 Identities=20% Similarity=0.088 Sum_probs=31.3
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 26 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 26 ~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
..+.++....|.++|+++-. -..++..+||--|+-+++...
T Consensus 50 ~R~gnPt~~~le~~la~Le~---g~~a~~~~SGmaAi~~~l~~l 90 (386)
T PF01053_consen 50 SRYGNPTVRALEQRLAALEG---GEDALLFSSGMAAISAALLAL 90 (386)
T ss_dssp TTTC-HHHHHHHHHHHHHHT----SEEEEESSHHHHHHHHHHHH
T ss_pred eccccccHHHHHHHHHHhhc---ccceeeccchHHHHHHHHHhh
Confidence 46678888999999998864 256777899999998887633
No 285
>PF08664 YcbB: YcbB domain; InterPro: IPR013972 YcbB is a DNA-binding protein [].
Probab=34.47 E-value=49 Score=25.13 Aligned_cols=36 Identities=11% Similarity=0.079 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHh
Q 031493 7 IELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 42 (158)
Q Consensus 7 P~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~ 42 (158)
.+|++|+...+..+.......|.+|...++|.+|-+
T Consensus 69 QRIRRai~~al~nlAsLGl~Dy~N~~Fe~YA~~lFd 104 (134)
T PF08664_consen 69 QRIRRAIKQALTNLASLGLEDYSNPIFEEYASRLFD 104 (134)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCChHHHHHHHHcCC
Confidence 367778887777777766557889989998877654
No 286
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=34.02 E-value=66 Score=27.09 Aligned_cols=41 Identities=12% Similarity=0.043 Sum_probs=30.1
Q ss_pred CCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 28 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 28 ~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
|+.....+|.+.+.+..+-+ .+.|.++++++|++..+++..
T Consensus 54 Yp~~~~~~l~~~~a~~~g~~-~~~I~~~~Gs~e~i~~~~~~~ 94 (351)
T PRK01688 54 YPECQPKAVIENYAAYAGVK-PEQVLVSRGADEGIELLIRAF 94 (351)
T ss_pred CCCCChHHHHHHHHHHhCCC-HHHEEEcCCHHHHHHHHHHHh
Confidence 44444467778888776534 568999999999999988754
No 287
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=33.70 E-value=2.3e+02 Score=23.67 Aligned_cols=61 Identities=8% Similarity=-0.071 Sum_probs=34.8
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCC-hHHHHHHHHHHhhcC---CCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVY-EPALECAELLLQGVG---KGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~-~~~~~LAe~L~~~~P---~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|.+.+++.+..+...+.. .... +....+|+.+.+..+ -. .+.+..++++++|+..++.+.
T Consensus 42 ~~~~~~~~~~~~~~~~Y~~--~~G~~~lr~~ia~~l~~~~~~~~~~-~~~I~it~G~~~~i~~~~~~l 106 (364)
T PRK07865 42 PPVIQEALAAAADAPGYPT--TAGTPELREAIVGWLARRRGVTGLD-PAAVLPVIGSKELVAWLPTLL 106 (364)
T ss_pred CHHHHHHHHHHHhhCCCCC--ccCCHHHHHHHHHHHHHHcCCCCCC-cccEEEccChHHHHHHHHHHH
Confidence 4667777766543222211 1112 334456676655322 12 457899998899998876554
No 288
>PRK09028 cystathionine beta-lyase; Provisional
Probab=33.40 E-value=1.4e+02 Score=26.22 Aligned_cols=38 Identities=16% Similarity=0.146 Sum_probs=28.7
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
...++...+|.++|+++-+ -..+.+++||++|+.+++.
T Consensus 57 r~~npt~~~Le~~iA~le~---~~~~~~~~sG~~Ai~~~l~ 94 (394)
T PRK09028 57 RRGTPTHFAFQAAIVELEG---GAGTALYPSGAAAISNALL 94 (394)
T ss_pred CCCCchHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHH
Confidence 3445666788899998753 2467788999999999885
No 289
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=31.80 E-value=51 Score=25.06 Aligned_cols=42 Identities=21% Similarity=0.259 Sum_probs=24.9
Q ss_pred CChHHHHHHHHHHhhcCCCCCCcE--EEeCChHHHHHHHHHHHHhc
Q 031493 29 VYEPALECAELLLQGVGKGWASRA--YFSDNGSTAIEIALKMAFRK 72 (158)
Q Consensus 29 ~~~~~~~LAe~L~~~~P~~~l~~v--~f~~SGSEA~E~AlKlAR~~ 72 (158)
+++--++|.|+|++....+ =+-| .|+-|||.|+- |+++-|++
T Consensus 173 ~~~kP~~l~~~lI~~~t~~-gdiVlDpF~GSGTT~~a-a~~l~R~~ 216 (231)
T PF01555_consen 173 PTQKPVELIERLIKASTNP-GDIVLDPFAGSGTTAVA-AEELGRRY 216 (231)
T ss_dssp TT-S-HHHHHHHHHHHS-T-T-EEEETT-TTTHHHHH-HHHTT-EE
T ss_pred eecCCHHHHHHHHHhhhcc-ceeeehhhhccChHHHH-HHHcCCeE
Confidence 4445678999999876433 2455 48889998764 56666654
No 290
>PRK08068 transaminase; Reviewed
Probab=31.67 E-value=2.4e+02 Score=23.85 Aligned_cols=64 Identities=6% Similarity=-0.081 Sum_probs=34.4
Q ss_pred CcHHHHHHHHHHHHhcCccCCCCC--CChHHHHHHHHHHhhcCCC-CCC-cEEEeCChHHHHHHHHHH
Q 031493 5 FQIELARDMGYTAARFGHVMFPEN--VYEPALECAELLLQGVGKG-WAS-RAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 5 ~hP~Iv~Av~eQl~~l~~~~~~~~--~~~~~~~LAe~L~~~~P~~-~l~-~v~f~~SGSEA~E~AlKl 68 (158)
.+|.+.+++.+.++.......... ..+....+|+.+.+..+.+ ..+ .+..+++|+++...++..
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~ 113 (389)
T PRK08068 46 TPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQC 113 (389)
T ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHH
Confidence 357888888887764221111011 1222344555554322211 024 588888889998887653
No 291
>PRK07337 aminotransferase; Validated
Probab=31.11 E-value=2.1e+02 Score=24.24 Aligned_cols=62 Identities=11% Similarity=-0.004 Sum_probs=33.2
Q ss_pred cHHHHHHHHHHHHhcCccCCCCC-CC-hHHHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPEN-VY-EPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~-~~-~~~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKl 68 (158)
.|.+.+++.+.++.-. ..+... .. +....+|+.+.+..+.. ..+.+.+++++++|...++..
T Consensus 45 ~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~ 109 (388)
T PRK07337 45 PEPVVEAAARALRRGV-TQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLA 109 (388)
T ss_pred CHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHH
Confidence 4677888887765311 111111 12 22334555544322211 135788999999998887764
No 292
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=30.96 E-value=1.1e+02 Score=25.50 Aligned_cols=40 Identities=5% Similarity=-0.188 Sum_probs=30.6
Q ss_pred CCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 28 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 28 ~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
|+.+...+|.+.|++...-. -..|..+++++||+..++++
T Consensus 37 Yp~~~~~~lr~~ia~~~~~~-~~~I~it~Gs~~~l~~~~~~ 76 (332)
T PRK06425 37 YPEISYTDIEDQIKIYTQGL-KIKVLIGPGLTHFIYRLLSY 76 (332)
T ss_pred CcCcCHHHHHHHHHHHhCCC-cceEEECCCHHHHHHHHHHH
Confidence 45455678888888876544 45799999999999998864
No 293
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=30.61 E-value=2.4e+02 Score=25.52 Aligned_cols=62 Identities=16% Similarity=0.026 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHhcCccCCC-CCCCh-HHHHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHH
Q 031493 7 IELARDMGYTAARFGHVMFP-ENVYE-PALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 7 P~Iv~Av~eQl~~l~~~~~~-~~~~~-~~~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKl 68 (158)
++..+|+.+.++.-.+.++. ..... .....||.|-+-.|.. ..+.|+.+..=+.|+|.||..
T Consensus 81 ~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~ 145 (447)
T KOG0259|consen 81 QEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISS 145 (447)
T ss_pred HHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHH
Confidence 56788888888664332211 11122 3456778877766654 134688776669999999873
No 294
>PF01904 DUF72: Protein of unknown function DUF72; InterPro: IPR002763 The function of this family is unknown. Aquifex aeolicus has two copies of this protein. A probable aspartyl-tRNA synthetase from Escherichia coli [] belongs to this group.; PDB: 1VPY_A 1ZTV_A 1VPQ_A.
Probab=30.30 E-value=68 Score=25.87 Aligned_cols=43 Identities=23% Similarity=0.142 Sum_probs=28.6
Q ss_pred CChHHHHHHHHHHhhcCCCCCCcEEEeC-ChHHHHHHHHHHHHh
Q 031493 29 VYEPALECAELLLQGVGKGWASRAYFSD-NGSTAIEIALKMAFR 71 (158)
Q Consensus 29 ~~~~~~~LAe~L~~~~P~~~l~~v~f~~-SGSEA~E~AlKlAR~ 71 (158)
..+...++++++.+....+.--.|+|-| .+..|.++|+++.+.
T Consensus 186 s~~eL~~~a~~i~~~~~~~~~v~v~fnN~~~g~a~~nA~~l~~~ 229 (230)
T PF01904_consen 186 SDEELEEWAERIRAWAAQGKEVYVFFNNDYEGYAPENALRLKEL 229 (230)
T ss_dssp -HHHHHHHHHHHHHHHTCSSEEEEEE-SBCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCEEEEEeCCccchHHHHHHHHHHh
Confidence 4456778889888876533112356665 468899999999874
No 295
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=30.28 E-value=3.1e+02 Score=22.97 Aligned_cols=62 Identities=8% Similarity=-0.087 Sum_probs=35.1
Q ss_pred cHHHHHHHHHHHHhcCccCCCCCCChHHHHHHHHHHhhcC---CCCCCcEEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVG---KGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~~~~~~~~LAe~L~~~~P---~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
.|.+.+++++..+...+.. .....+...++++.+.+... -. .+.+..++++++|+..++++.
T Consensus 36 ~~~~~~~~~~~~~~~~Y~~-~~G~~~lr~~ia~~~~~~~~~~~~~-~~~I~it~G~~~~i~~~~~~l 100 (357)
T TIGR03539 36 PPLIRAALAAAADAPGYPQ-TWGTPELREAIVDWLERRRGVPGLD-PTAVLPVIGTKELVAWLPTLL 100 (357)
T ss_pred CHHHHHHHHHHHhhCCCCc-ccCCHHHHHHHHHHHHHhcCCCCCC-cCeEEEccChHHHHHHHHHHH
Confidence 4667788776544322211 01112334456666654321 12 467888999999998877643
No 296
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=29.53 E-value=3e+02 Score=23.98 Aligned_cols=64 Identities=13% Similarity=-0.009 Sum_probs=38.3
Q ss_pred cHHHHHHHHHHHHhcC-ccCCCCCCChHHHHHHHHHHhhcCCC-CCCc-EEEeCChHHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFG-HVMFPENVYEPALECAELLLQGVGKG-WASR-AYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~-~~~~~~~~~~~~~~LAe~L~~~~P~~-~l~~-v~f~~SGSEA~E~AlKlA 69 (158)
.+.|.+++.+.+.... ++....-..+....+|+.+.+.-+-. ..+. |..++.++||+-+++..-
T Consensus 43 p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~ 109 (393)
T COG0436 43 PEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLAL 109 (393)
T ss_pred CHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHh
Confidence 4679999998887653 22111112233445666666553211 0234 888899999999888643
No 297
>PLN02509 cystathionine beta-lyase
Probab=28.37 E-value=2.1e+02 Score=25.80 Aligned_cols=37 Identities=19% Similarity=0.110 Sum_probs=26.8
Q ss_pred CCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHH
Q 031493 28 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 67 (158)
Q Consensus 28 ~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlK 67 (158)
..++...+|.++++++.+ -+.++..+||.+|+.+++.
T Consensus 130 ~gnpt~~aLE~~lA~leg---~e~ai~~~SG~aAi~~il~ 166 (464)
T PLN02509 130 SGNPTRDALESLLAKLDK---ADRAFCFTSGMAALSAVTH 166 (464)
T ss_pred CCCHHHHHHHHHHHHHhC---CCEEEEeCcHHHHHHHHHH
Confidence 346777888888888764 3466777899988865553
No 298
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=28.31 E-value=2.5e+02 Score=21.32 Aligned_cols=39 Identities=18% Similarity=0.104 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHhhcC----CCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 31 EPALECAELLLQGVG----KGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 31 ~~~~~LAe~L~~~~P----~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
+-...+|+.+.+..+ -. .++|..++++++|++.+++..-
T Consensus 96 ~lR~AiA~~l~~~~g~~v~~~-pd~Ivvt~Ga~~al~~l~~~l~ 138 (153)
T PLN02994 96 NFRKAIANFMAEARGGRVKFD-ADMIVLSAGATAANEIIMFCIA 138 (153)
T ss_pred HHHHHHHHHHHHHhCCCCccc-hhheEEcCCHHHHHHHHHHHHc
Confidence 445567777766533 12 4579999999999999876543
No 299
>PRK13260 2,3-diketo-L-gulonate reductase; Provisional
Probab=28.07 E-value=64 Score=27.95 Aligned_cols=16 Identities=13% Similarity=0.252 Sum_probs=13.9
Q ss_pred ChHHHHHHHHHHHHhc
Q 031493 57 NGSTAIEIALKMAFRK 72 (158)
Q Consensus 57 SGSEA~E~AlKlAR~~ 72 (158)
.+..|+|.||+.||++
T Consensus 89 ~~~~am~~aiekAr~~ 104 (332)
T PRK13260 89 TAKKMMDRAIELARDH 104 (332)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4689999999999985
No 300
>PRK15025 ureidoglycolate dehydrogenase; Provisional
Probab=28.04 E-value=64 Score=28.19 Aligned_cols=16 Identities=19% Similarity=0.237 Sum_probs=14.1
Q ss_pred ChHHHHHHHHHHHHhc
Q 031493 57 NGSTAIEIALKMAFRK 72 (158)
Q Consensus 57 SGSEA~E~AlKlAR~~ 72 (158)
.+..|+|.||+.||++
T Consensus 89 a~~~Am~~aiekA~~~ 104 (349)
T PRK15025 89 AAKMGMEHAIETAKQN 104 (349)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4689999999999985
No 301
>PF07704 PSK_trans_fac: Rv0623-like transcription factor; InterPro: IPR011660 This entry represents the Rv0623 (P96913 from SWISSPROT)-like group of transcription factors associated with the PSK operon [].
Probab=27.16 E-value=1.2e+02 Score=20.68 Aligned_cols=31 Identities=19% Similarity=0.093 Sum_probs=23.5
Q ss_pred CChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 29 VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 29 ~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
-++...+||++|++..+. |=+|||+.||+--
T Consensus 6 kd~ev~~LareLA~~tG~----------s~TeAVr~AL~~~ 36 (82)
T PF07704_consen 6 KDPEVDRLARELARLTGE----------SKTEAVRRALRER 36 (82)
T ss_pred CCHHHHHHHHHHHHHHCC----------CHHHHHHHHHHHH
Confidence 367788899999987642 4589999999743
No 302
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=26.40 E-value=1.7e+02 Score=20.43 Aligned_cols=41 Identities=12% Similarity=0.006 Sum_probs=25.1
Q ss_pred ChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 30 YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 30 ~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
+-+..++.+.+.+..+.....-+++|.+|..+..++..+.+
T Consensus 40 nip~~~l~~~l~~~~~~~~~~vvlyC~~G~rS~~aa~~L~~ 80 (101)
T TIGR02981 40 NIPLKEIKEHIATAVPDKNDTVKLYCNAGRQSGMAKDILLD 80 (101)
T ss_pred ECCHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHH
Confidence 33344565556554332212235889999998888877665
No 303
>PRK06460 hypothetical protein; Provisional
Probab=25.57 E-value=1.4e+02 Score=25.78 Aligned_cols=39 Identities=13% Similarity=0.057 Sum_probs=27.6
Q ss_pred CCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 27 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 27 ~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
...++...+|.++|+++... +.....+||++|+..++..
T Consensus 41 r~~~p~~~~L~~~lA~l~g~---~~~v~~~sG~~ai~~~l~a 79 (376)
T PRK06460 41 REANPTVLELTKKIVELENA---EMGVAFSSGMGAISTTALA 79 (376)
T ss_pred CCCCccHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHH
Confidence 34566778898999998753 2334448899999888763
No 304
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=25.56 E-value=2.4e+02 Score=23.20 Aligned_cols=66 Identities=8% Similarity=-0.051 Sum_probs=32.5
Q ss_pred CCCCcHHHHHHHHHHHH---hcCccCCCCCCChH-HHHHHHHHHhhcC------CCCCC-cEEEeCChHHHHHHHHHHHH
Q 031493 2 FRWFQIELARDMGYTAA---RFGHVMFPENVYEP-ALECAELLLQGVG------KGWAS-RAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 2 ~Gh~hP~Iv~Av~eQl~---~l~~~~~~~~~~~~-~~~LAe~L~~~~P------~~~l~-~v~f~~SGSEA~E~AlKlAR 70 (158)
++.+||.+.+++++..+ ..... ..|.... ..+|-|.|++... -. .+ .++.+++..++...++.+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~~i~~~~G~~~~~~~~~~~~~ 89 (363)
T PF00155_consen 13 LLSQNPPPPAAIKAAIRGAATSSSF--LGYPPPQGYPELREAIADFLGRRYGVPVD-PEANILVTSGAQAALFLLLRLLK 89 (363)
T ss_dssp STTSSHHHHHHHHHHHHHHHHHTGC--TSSTCTTHHHHHHHHHHHHHHHHHTHHTT-GGEGEEEESHHHHHHHHHHHHHH
T ss_pred CcccccchHHHHHHHHHHhhccccc--ccCCCchhhHHHHHHHHHHhhhccCcccc-cceEEEEecccccchhhhhhccc
Confidence 44567777777766544 22111 2333222 3444455554432 12 34 56666544666666665553
No 305
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=25.31 E-value=3.5e+02 Score=22.83 Aligned_cols=63 Identities=5% Similarity=-0.171 Sum_probs=34.3
Q ss_pred cHHHHHHHHHHHHhcCccCCCCC--CChHHHHHHHHHHhhcCCC-CCC-cEEEeCChHHHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHVMFPEN--VYEPALECAELLLQGVGKG-WAS-RAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~~~~~~--~~~~~~~LAe~L~~~~P~~-~l~-~v~f~~SGSEA~E~AlKl 68 (158)
.|.+.+++++.++......+... ..+....+|+.+.+..+-+ ..+ .|..+++++||+..+++.
T Consensus 45 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~ 111 (388)
T PRK07366 45 PAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLA 111 (388)
T ss_pred CHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHH
Confidence 57788888877653211111111 1123344666554432211 034 588888889999988774
No 306
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=24.42 E-value=1.3e+02 Score=27.48 Aligned_cols=33 Identities=12% Similarity=0.037 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHH
Q 031493 31 EPALECAELLLQGVGKGWASRAYFSDNGSTAIEIAL 66 (158)
Q Consensus 31 ~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~Al 66 (158)
+...+|-+++.+.++ .+.+.+++||+.|+..+.
T Consensus 78 ~s~~~LE~~vAe~lG---~e~aV~v~sGTaAl~ll~ 110 (460)
T PRK13237 78 RNFYHLEETVQEYYG---FKHVVPTHQGRGAENLLS 110 (460)
T ss_pred CcHHHHHHHHHHHHC---CCeEEEeCCHHHHHHHHH
Confidence 345678788888886 568999999999999853
No 307
>PRK06836 aspartate aminotransferase; Provisional
Probab=24.23 E-value=3e+02 Score=23.40 Aligned_cols=36 Identities=25% Similarity=0.214 Sum_probs=22.6
Q ss_pred HHHHHHHHhhcCCC-CCCcEEEeCChHHHHHHHHHHH
Q 031493 34 LECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 34 ~~LAe~L~~~~P~~-~l~~v~f~~SGSEA~E~AlKlA 69 (158)
..+++.+......+ ..+.+.+++++++|+..+++..
T Consensus 80 ~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l 116 (394)
T PRK06836 80 EAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAI 116 (394)
T ss_pred HHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHh
Confidence 34555554332111 1357899999999999888643
No 308
>PF06753 Bradykinin: Bradykinin; InterPro: IPR009608 This family consists of several bradykinin sequences. The skins of anuran amphibians, in addition to mucus glands, contain highly specialised poison glands, which, in reaction to stress or attack, exude a complex noxious cocktail of biologically active molecules. These secretions often contain a plethora of peptides among which bradykinin or structural variants have been identified [].; GO: 0005179 hormone activity, 0006950 response to stress, 0005576 extracellular region
Probab=24.16 E-value=40 Score=16.99 Aligned_cols=10 Identities=30% Similarity=0.561 Sum_probs=7.2
Q ss_pred cCCCCCcCCc
Q 031493 108 VPWKLKHHHL 117 (158)
Q Consensus 108 ~~~~~~yHG~ 117 (158)
+||+|.||-.
T Consensus 9 tpfrgkfhsq 18 (19)
T PF06753_consen 9 TPFRGKFHSQ 18 (19)
T ss_pred Cccccccccc
Confidence 3588988853
No 309
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=23.98 E-value=2.3e+02 Score=25.80 Aligned_cols=33 Identities=9% Similarity=-0.028 Sum_probs=26.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHH
Q 031493 30 YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIA 65 (158)
Q Consensus 30 ~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~A 65 (158)
.+...+|-+++.++++ .+.+.+++||+.|...+
T Consensus 70 ~~s~~~lE~~va~~~G---~~~av~v~sGT~Al~ll 102 (450)
T TIGR02618 70 SRNFYHLERTVRELYG---FKYVVPTHQGRGAENLL 102 (450)
T ss_pred CCcHHHHHHHHHHHHC---CCeEEEcCCHHHHHHHH
Confidence 3446678888999885 67899999999997764
No 310
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.79 E-value=1.1e+02 Score=25.72 Aligned_cols=61 Identities=20% Similarity=0.243 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhcCccC----C--CCCCChHHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHhc
Q 031493 7 IELARDMGYTAARFGHVM----F--PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRK 72 (158)
Q Consensus 7 P~Iv~Av~eQl~~l~~~~----~--~~~~~~~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~~ 72 (158)
.++.+.+++.+.+.+++. . ..++.+ .++-+.|.+.+. -.-.||..|||-|+..|-++|...
T Consensus 106 ~e~~~rl~~a~~~v~~~~GlnNhmGs~~tsn--~~aM~~~m~~Lk---~r~l~flDs~T~a~S~a~~iAk~~ 172 (250)
T COG2861 106 EEILRRLRKAMNKVPDAVGLNNHMGSRFTSN--EDAMEKLMEALK---ERGLYFLDSGTIANSLAGKIAKEI 172 (250)
T ss_pred HHHHHHHHHHHhhCccceeehhhhhhhhcCc--HHHHHHHHHHHH---HCCeEEEcccccccchhhhhHhhc
Confidence 477788888887766531 1 123221 123344444332 135788999999999999999754
No 311
>PRK12566 glycine dehydrogenase; Provisional
Probab=23.36 E-value=2.4e+02 Score=28.17 Aligned_cols=43 Identities=14% Similarity=0.010 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhcCCCCCCcEEE-eCChHHHHHHHHHHHHhcccccCCc
Q 031493 33 ALECAELLLQGVGKGWASRAYF-SDNGSTAIEIALKMAFRKFSFDHDV 79 (158)
Q Consensus 33 ~~~LAe~L~~~~P~~~l~~v~f-~~SGSEA~E~AlKlAR~~~~~~~g~ 79 (158)
..+|.+.|+++++ ++.+-+ -+||+.|+-+++...|.| +..+|+
T Consensus 545 i~elq~~l~eLtG---md~~Sl~p~sGA~gE~A~Lmair~y-h~~~Ge 588 (954)
T PRK12566 545 IDELEAWLCAITG---FDAICMQPNSGAQGEYAGLLAIRRY-HRSRGQ 588 (954)
T ss_pred HHHHHHHHHHHHC---CCeEeecCCchHHHHHHHHHHHHHH-HHhcCC
Confidence 4467788888885 666544 468998888888888875 444554
No 312
>PLN00105 malate/L-lactate dehydrogenase; Provisional
Probab=23.33 E-value=86 Score=27.14 Aligned_cols=16 Identities=19% Similarity=0.144 Sum_probs=14.0
Q ss_pred ChHHHHHHHHHHHHhc
Q 031493 57 NGSTAIEIALKMAFRK 72 (158)
Q Consensus 57 SGSEA~E~AlKlAR~~ 72 (158)
.+..|+|.||+.||++
T Consensus 78 ~~~~am~~aiekAr~~ 93 (330)
T PLN00105 78 VLHHAMDMAIDKAKTH 93 (330)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4689999999999975
No 313
>PTZ00377 alanine aminotransferase; Provisional
Probab=22.88 E-value=2.6e+02 Score=24.75 Aligned_cols=62 Identities=13% Similarity=0.104 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHhcCccCCCCCC-----ChHHHHHHHHHHhhc--CCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 7 IELARDMGYTAARFGHVMFPENV-----YEPALECAELLLQGV--GKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 7 P~Iv~Av~eQl~~l~~~~~~~~~-----~~~~~~LAe~L~~~~--P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
..+++++.+.++..... ...|. .+....+|+.+.+.- +-. .+.|++++++++|+..+++...
T Consensus 91 ~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~-~~~I~it~Ga~~al~~~~~~l~ 159 (481)
T PTZ00377 91 ADVVARAKEYLNAIGGG-TGAYTDSAGYPFVRKAVAAFIERRDGVPKD-PSDIFLTDGASSGIKLLLQLLI 159 (481)
T ss_pred HHHHHHHHHHHHhCCCc-ccCcCcccCCHHHHHHHHHHHHHhcCCCCC-hhhEEEcCCHHHHHHHHHHHhc
Confidence 35677776655543211 11222 123344555555421 112 4689999999999999988653
No 314
>PRK10098 putative dehydrogenase; Provisional
Probab=22.64 E-value=91 Score=27.19 Aligned_cols=16 Identities=13% Similarity=0.206 Sum_probs=14.0
Q ss_pred ChHHHHHHHHHHHHhc
Q 031493 57 NGSTAIEIALKMAFRK 72 (158)
Q Consensus 57 SGSEA~E~AlKlAR~~ 72 (158)
.+..|+|.||+.||++
T Consensus 93 a~~~Am~~aie~Ar~~ 108 (350)
T PRK10098 93 VAHEAMALGIERARQH 108 (350)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4689999999999985
No 315
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=21.97 E-value=1.5e+02 Score=24.86 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=26.0
Q ss_pred HHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHH
Q 031493 33 ALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 69 (158)
Q Consensus 33 ~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlA 69 (158)
..+|-+.+++..+-. .+.+.++++++||+..+++..
T Consensus 62 ~~~Lr~aia~~~~~~-~~~I~it~Gs~~~i~~~~~~~ 97 (354)
T PRK04635 62 PPELINAYSAYAGVA-PEQILTSRGADEAIELLIRAF 97 (354)
T ss_pred HHHHHHHHHHHhCcC-HHHEEEeCCHHHHHHHHHHHh
Confidence 455666777665433 467999999999999888743
No 316
>PF12390 Se-cys_synth_N: Selenocysteine synthase N terminal
Probab=21.85 E-value=89 Score=18.32 Aligned_cols=17 Identities=6% Similarity=-0.040 Sum_probs=12.6
Q ss_pred CCCcHHHHHHHHHHHHh
Q 031493 3 RWFQIELARDMGYTAAR 19 (158)
Q Consensus 3 Gh~hP~Iv~Av~eQl~~ 19 (158)
.|+++.|++++++.+++
T Consensus 22 ~~~r~~v~~~vR~~ld~ 38 (40)
T PF12390_consen 22 RYGRPLVVDAVREVLDE 38 (40)
T ss_pred HcCHHHHHHHHHHHHHH
Confidence 36778888888877765
No 317
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=21.78 E-value=2.8e+02 Score=24.42 Aligned_cols=30 Identities=17% Similarity=0.025 Sum_probs=19.0
Q ss_pred HHHhhcCCCCCCcEEEe---CChHHHHHHHHHHH
Q 031493 39 LLLQGVGKGWASRAYFS---DNGSTAIEIALKMA 69 (158)
Q Consensus 39 ~L~~~~P~~~l~~v~f~---~SGSEA~E~AlKlA 69 (158)
++.+++... .+.+.|+ +||++||.++++--
T Consensus 88 ~~a~lf~a~-~~~~~~~~~~~sgt~an~~v~~al 120 (452)
T PTZ00094 88 RALEAFGLD-PEEWGVNVQPYSGSPANFAVYTAL 120 (452)
T ss_pred HHHHHhCCC-cccceeecCCCchHHHHHHHHHHh
Confidence 455555432 3445455 68999999988644
No 318
>PF05965 FYRC: F/Y rich C-terminus; InterPro: IPR003889 The "FY-rich" domain C-terminal region is sometimes closely juxtaposed with the N-terminal region (IPR003888 from INTERPRO), but sometimes is far distant. It is of unknown function, but occurs frequently in chromatin-associated proteins like trithorax and its homologues.; GO: 0005634 nucleus; PDB: 2WZO_A.
Probab=21.43 E-value=30 Score=23.55 Aligned_cols=14 Identities=21% Similarity=0.214 Sum_probs=11.4
Q ss_pred CCCCCcHHHHHHHH
Q 031493 1 MFRWFQIELARDMG 14 (158)
Q Consensus 1 ~~Gh~hP~Iv~Av~ 14 (158)
|||-.||.|+..++
T Consensus 56 ~FGls~p~V~~lie 69 (86)
T PF05965_consen 56 MFGLSNPAVQRLIE 69 (86)
T ss_dssp HHSTTSHHHHHHHT
T ss_pred hcCCCCHHHHHHHH
Confidence 58999999887764
No 319
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=21.04 E-value=3.4e+02 Score=23.24 Aligned_cols=60 Identities=18% Similarity=0.119 Sum_probs=32.3
Q ss_pred cHHHHHHHHHHHHhcCcc-CCCCC-C---C-hHHHHHHHHHHhhc--CCCCCCcEEEeCChHHHHHHHH
Q 031493 6 QIELARDMGYTAARFGHV-MFPEN-V---Y-EPALECAELLLQGV--GKGWASRAYFSDNGSTAIEIAL 66 (158)
Q Consensus 6 hP~Iv~Av~eQl~~l~~~-~~~~~-~---~-~~~~~LAe~L~~~~--P~~~l~~v~f~~SGSEA~E~Al 66 (158)
+|.+.+++++.++++... ....| + . +....+|+.+.+.- +-. .+.+..++++.+|.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~-~~~I~it~Ga~~al~~l~ 116 (409)
T PRK07590 49 PPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDIS-ADEIFISDGAKCDTGNIL 116 (409)
T ss_pred CHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCC-hhhEEECCCHHHHHHHHH
Confidence 467888888877653210 00122 1 1 22334555443221 112 357899988899988743
No 320
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=20.64 E-value=1.9e+02 Score=24.05 Aligned_cols=35 Identities=14% Similarity=-0.001 Sum_probs=24.3
Q ss_pred HHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHH
Q 031493 33 ALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 68 (158)
Q Consensus 33 ~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKl 68 (158)
..++-+.|++..+-. .+.+.+++++++++.++.++
T Consensus 49 ~~~lr~~la~~~~~~-~~~i~~t~G~~~~i~~~~~~ 83 (330)
T TIGR01140 49 YDELRAAAAAYYGLP-AASVLPVNGAQEAIYLLPRL 83 (330)
T ss_pred HHHHHHHHHHHhCCC-hhhEEECCCHHHHHHHHHHH
Confidence 456667777766433 46788888888888886554
No 321
>PLN02231 alanine transaminase
Probab=20.61 E-value=4.8e+02 Score=23.83 Aligned_cols=37 Identities=11% Similarity=0.187 Sum_probs=24.9
Q ss_pred HHHHHHHHHhh--cCCCCCCcEEEeCChHHHHHHHHHHHH
Q 031493 33 ALECAELLLQG--VGKGWASRAYFSDNGSTAIEIALKMAF 70 (158)
Q Consensus 33 ~~~LAe~L~~~--~P~~~l~~v~f~~SGSEA~E~AlKlAR 70 (158)
...+|+.+.+. .+-. .+.++.++++++|+..++++..
T Consensus 174 ReaIA~~~~~r~g~~~~-pe~I~iT~Ga~~ai~~~~~~l~ 212 (534)
T PLN02231 174 RDAIAAGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLI 212 (534)
T ss_pred HHHHHHHHHhccCCCCC-cccEEEeCCHHHHHHHHHHHhc
Confidence 34455555443 1222 4679999999999999998654
No 322
>cd05009 SIS_GlmS_GlmD_2 SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=20.61 E-value=2.1e+02 Score=20.45 Aligned_cols=24 Identities=38% Similarity=0.292 Sum_probs=16.7
Q ss_pred CCcEEEeC---ChHHHHHHHHHHHHhc
Q 031493 49 ASRAYFSD---NGSTAIEIALKMAFRK 72 (158)
Q Consensus 49 l~~v~f~~---SGSEA~E~AlKlAR~~ 72 (158)
.+++++.- |...|.|.++|+.+..
T Consensus 13 ~~~i~~~G~G~s~~~a~e~~~kl~e~~ 39 (153)
T cd05009 13 AKSFYVLGRGPNYGTALEGALKLKETS 39 (153)
T ss_pred cCcEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 45666544 4478899999988763
No 323
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=20.16 E-value=2.6e+02 Score=19.66 Aligned_cols=40 Identities=13% Similarity=0.097 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhhcCCCCCCcEEEeCChHHHHHHHHHHHHh
Q 031493 32 PALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFR 71 (158)
Q Consensus 32 ~~~~LAe~L~~~~P~~~l~~v~f~~SGSEA~E~AlKlAR~ 71 (158)
+..++.+.+.+..+...-.-+++|.+|..|-.+|.++.+.
T Consensus 44 P~~~l~~~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~ 83 (104)
T PRK10287 44 PLKEVKERIATAVPDKNDTVKLYCNAGRQSGQAKEILSEM 83 (104)
T ss_pred CHHHHHHHHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHc
Confidence 3445555555543322122478899999999988887653
No 324
>TIGR03175 AllD ureidoglycolate dehydrogenase. This enzyme converts ureidoglycolate to oxalureate in the non-urea-forming catabolism of allantoin (GenProp0687). The pathway has been characterized in E. coli and is observed in the genomes of Entercoccus faecalis and Bacillus licheniformis.
Probab=20.08 E-value=1.1e+02 Score=26.77 Aligned_cols=16 Identities=25% Similarity=0.351 Sum_probs=13.9
Q ss_pred ChHHHHHHHHHHHHhc
Q 031493 57 NGSTAIEIALKMAFRK 72 (158)
Q Consensus 57 SGSEA~E~AlKlAR~~ 72 (158)
.+..|+|.||+.||++
T Consensus 89 a~~~Am~~aiekAr~~ 104 (349)
T TIGR03175 89 AAKMAMEHAIEIAKKS 104 (349)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4689999999999975
Done!