BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031498
(158 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FHW7|SKP1B_ARATH SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1
Length = 171
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/171 (74%), Positives = 142/171 (83%), Gaps = 13/171 (7%)
Query: 1 MSSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC 60
MS+ +KITLKSSDGE FE++E VALESQTIKHM+EDDC D IPLPNVTS ILSKVIEYC
Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60
Query: 61 KKHVEAGSGDKKD-------------DKSTEDDLKTWDADFVKVDQNTLFDLILAANYLN 107
K+HVEA + S+++DLKTWD++F+KVDQ TLFDLILAANYLN
Sbjct: 61 KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120
Query: 108 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDF+P+EEEEVRRENQWAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
>sp|Q39255|SKP1A_ARATH SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1
Length = 160
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/159 (77%), Positives = 137/159 (86%), Gaps = 3/159 (1%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK 62
S KKI LKSSDGE+FEVEE VALESQTI HMVEDDC D +PLPNVTS IL+KVIEYCK+
Sbjct: 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61
Query: 63 HVEAGSGDKK---DDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTV 119
HVEA + + +++DDLK WDADF+K+DQ TLF+LILAANYLNIK LLDLTCQTV
Sbjct: 62 HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121
Query: 120 ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
ADMIKGKTPEEIR TFNIKNDF+P+EEEEVRRENQWAFE
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
>sp|Q9LNT9|ASK4_ARATH SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1
Length = 163
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/160 (70%), Positives = 134/160 (83%), Gaps = 4/160 (2%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK 62
++K I LKSSDGE+FE+EE VA++SQTIKHM+EDDCAD IPLPNVT IL+KVIEYCKK
Sbjct: 4 TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKK 63
Query: 63 HVEAGS---GDKKDDKSTEDD-LKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQT 118
HVEA + GDK S E+D LK WD++FVKVDQ TLFDLILAANYLNI GLLDLTC+
Sbjct: 64 HVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKA 123
Query: 119 VADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
VAD ++GKTPE++R FNIKND++P+EE EVR EN+WAFE
Sbjct: 124 VADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
>sp|Q9SL93|ASK3_ARATH SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1
Length = 163
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/160 (70%), Positives = 132/160 (82%), Gaps = 4/160 (2%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK 62
++K I LKSSDGE+FEVEE VA+ESQTIKHM+EDDC D IPLPNVT IL+KVIEYCKK
Sbjct: 4 TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKK 63
Query: 63 HVEAGS---GDKKDDKSTED-DLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQT 118
HVEA + GDK STE+ +LKTWD DFVKVD TLFDL+ AANYLNI GLLDLTC+
Sbjct: 64 HVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKA 123
Query: 119 VADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
VAD ++GKTP ++R+ FNIKND++P+EE EVR EN+WAFE
Sbjct: 124 VADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
>sp|O49484|ASK11_ARATH SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1
Length = 152
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 107/156 (68%), Positives = 124/156 (79%), Gaps = 5/156 (3%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK 62
S K I L SSDG++FEVEE VA++SQTI HMVEDDC IPL NV S IL KVIEYCKK
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61
Query: 63 HVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADM 122
H D+ + S E+DL WD F+ ++Q+T+F+LILAANYLNIK LLDLTCQTVADM
Sbjct: 62 H----HVDEANPIS-EEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADM 116
Query: 123 IKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
IKGKTPEEIR TFNI+NDF+P+EEE VR+ENQWAFE
Sbjct: 117 IKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
>sp|O65674|ASK12_ARATH SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1
Length = 152
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/157 (66%), Positives = 123/157 (78%), Gaps = 7/157 (4%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK 62
S K I L SSDG++FEVEE VA++SQTI HMVEDDC IPL NV S IL KVIEYCKK
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61
Query: 63 -HVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVAD 121
HV+ + +E+DL WD F+ ++Q+T+F+LILAANYLNIK L DLTCQTVAD
Sbjct: 62 YHVDEA------NPISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVAD 115
Query: 122 MIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
MIKGKTPEEIR TFNI+NDF+P+EEE VR+ENQWAFE
Sbjct: 116 MIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
>sp|Q9M1X5|ASK13_ARATH SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1
Length = 154
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/156 (62%), Positives = 122/156 (78%), Gaps = 6/156 (3%)
Query: 5 KKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHV 64
K + L SSDGE+F+VEE VA++SQTI HM+EDDC +P+ NVT ILSKVIEYCKKHV
Sbjct: 3 KMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHV 62
Query: 65 EAGSGDKKDDKSTEDDLKTWDADFVKV--DQNTLFDLILAANYLNIKGLLDLTCQTVADM 122
+ S ++ ++D+LK WDA+F+K +TLFD++LAANYLNIK LLDL CQTVADM
Sbjct: 63 VSDSPTEE----SKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADM 118
Query: 123 IKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
I GK P+EIR I+NDF+P+EEEE+R+ENQWAFE
Sbjct: 119 ITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154
>sp|Q9LSX8|ASK10_ARATH SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=1
Length = 152
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 114/157 (72%), Gaps = 7/157 (4%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC-K 61
S KKI LKSSDG +FEVEE A + QTI HM EDDC D IPLP VT IL VIEYC K
Sbjct: 2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNK 61
Query: 62 KHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVAD 121
HV+A + +++DLK WD +F++ Q+T+FDLI+AANYLNIK LLDL CQTVAD
Sbjct: 62 HHVDAA------NPCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVAD 115
Query: 122 MIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
MIK T E RK FNI+ND++ +EEE VRRENQW FE
Sbjct: 116 MIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGFE 152
>sp|O81057|ASK14_ARATH SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1
Length = 149
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/157 (62%), Positives = 119/157 (75%), Gaps = 10/157 (6%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK 62
S KI L SSDGE+FEVEE VA + + ++HM+EDDC T +PL NVT ILS V+EYCKK
Sbjct: 2 SSNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKK 61
Query: 63 HVEAGSGDKKDDKSTEDDLKTWDADFVK-VDQNTLFDLILAANYLNIKGLLDLTCQTVAD 121
HV D++S D+ KTWD +F+K DQ T+F L+LAANYLNIKGLLDL+ QTVAD
Sbjct: 62 HV-------VDEES--DEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVAD 112
Query: 122 MIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
IK KTPEEIR+ FNI+NDF+P+EE VR+EN WAFE
Sbjct: 113 RIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149
>sp|Q9LSX9|ASK9_ARATH SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1
Length = 153
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 117/158 (74%), Gaps = 8/158 (5%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTI-KHMVEDDCADTVIPLPNVTSTILSKVIEYC- 60
S KKI LKSSDG +FEVEE A + Q I HM E+DC D IPLPNVT IL+ VIEYC
Sbjct: 2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCN 61
Query: 61 KKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVA 120
K HV+A + ++DDLK WD +F++ D +T+FDLI AANYLNIK L DL CQTVA
Sbjct: 62 KHHVDAA------NPCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVA 115
Query: 121 DMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
++IKG TPE+IR+ FNI+ND +P+EE +RREN+WAFE
Sbjct: 116 EIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAFE 153
>sp|P52285|SKP1A_DICDI SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium
discoideum GN=fpaA PE=1 SV=1
Length = 162
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 122/153 (79%), Gaps = 3/153 (1%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKVIEYCKKHVE 65
+ L+SSD + FE+E+ +A S TIK+M+ED +D+ IPLPNVTSTIL KV++YC+ H +
Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQ 63
Query: 66 AGS--GDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMI 123
S GD K D+ DD+ +D DF KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI
Sbjct: 64 HPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMI 123
Query: 124 KGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 156
+GKTPEEIRK FNIKNDF+P+EEE++R+EN+W
Sbjct: 124 RGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWC 156
>sp|Q557E4|SKP1B_DICDI SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium
discoideum GN=fpaB-1 PE=1 SV=1
Length = 162
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 121/153 (79%), Gaps = 3/153 (1%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKVIEYCKKHVE 65
+ L+SSD + FE+E+ +A S TIK+M+ED +D IPLPNVTSTIL KV++YC+ H +
Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQ 63
Query: 66 AGS--GDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMI 123
S GD K D+ DD+ +D DF KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI
Sbjct: 64 HPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMI 123
Query: 124 KGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 156
+GKTPEEIRK FNIKNDF+P+EEE++R+EN+W
Sbjct: 124 RGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWC 156
>sp|O81055|ASK16_ARATH SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1
Length = 170
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 117/168 (69%), Gaps = 14/168 (8%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK 62
S KI L SSD E+FEVEE VA + + I HM++DDCAD IPL NVT IL+ VIEYCKK
Sbjct: 2 SSNKIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKK 61
Query: 63 HV-----------EAGSGDKKDDKSTEDDLKTWDADFVK-VDQNTLFDLILAANYLNIKG 110
HV EA S + ++ E L+TWDA+F+K D T+ LILA NYLN++
Sbjct: 62 HVLDDVDDSDDSTEATSENVNEEAKNE--LRTWDAEFMKEFDMETVMKLILAVNYLNVQD 119
Query: 111 LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
LL LTCQTVAD +K +PEE+R+ FNI+ND++P+EE+ +R+EN WAFE
Sbjct: 120 LLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE 167
>sp|O81058|ASK19_ARATH SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=1 SV=1
Length = 200
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 122/189 (64%), Gaps = 33/189 (17%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK 62
S KKI L SSDGE+F+VEE VA + Q + H++EDDCA IP+PNVT IL+KVIEYCKK
Sbjct: 2 SSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKK 61
Query: 63 HVE-----------AGSGDK--------KDD----KSTEDD---------LKTWDADFVK 90
HVE + GDK DD +STE D L WDA F+K
Sbjct: 62 HVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMK 121
Query: 91 -VDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEV 149
D T+FD+ILAANYLN++GL DL +T+AD IK TPEE+R+ FNI+NDF+P+EEE +
Sbjct: 122 DFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAI 181
Query: 150 RRENQWAFE 158
R EN W FE
Sbjct: 182 RNENAWTFE 190
>sp|Q71U00|SKP1_XENLA S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1
SV=3
Length = 163
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 117/159 (73%), Gaps = 7/159 (4%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCK 61
I L+SSDGE FEV+ +A +S TIK M+ED + D +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KH--VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTV 119
H D ++ + DD+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TV
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 120 ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
A+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q5R512|SKP1_PONAB S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2
SV=1
Length = 163
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 117/159 (73%), Gaps = 7/159 (4%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCK 61
I L+SSDGE FEV+ +A +S TIK M+ED + D +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KH--VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTV 119
H D ++ + DD+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TV
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 120 ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
A+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q4R5B9|SKP1_MACFA S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1
PE=2 SV=1
Length = 163
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 117/159 (73%), Gaps = 7/159 (4%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCK 61
I L+SSDGE FEV+ +A +S TIK M+ED + D +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KH--VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTV 119
H D ++ + DD+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TV
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 120 ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
A+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|P63208|SKP1_HUMAN S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1
SV=2
Length = 163
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 117/159 (73%), Gaps = 7/159 (4%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCK 61
I L+SSDGE FEV+ +A +S TIK M+ED + D +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KH--VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTV 119
H D ++ + DD+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TV
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 120 ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
A+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q5ZKF5|SKP1_CHICK S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2
SV=1
Length = 163
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 117/159 (73%), Gaps = 7/159 (4%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCK 61
I L+SSDGE FEV+ +A +S TIK M+ED + D +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KH--VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTV 119
H D ++ + DD+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TV
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 120 ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
A+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|P63209|SKP1_CAVPO S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2
SV=2
Length = 163
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 117/159 (73%), Gaps = 7/159 (4%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCK 61
I L+SSDGE FEV+ +A +S TIK M+ED + D +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KH--VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTV 119
H D ++ + DD+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TV
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 120 ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
A+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q3ZCF3|SKP1_BOVIN S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1
Length = 163
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 117/159 (73%), Gaps = 7/159 (4%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCK 61
I L+SSDGE FEV+ +A +S TIK M+ED + D +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KH--VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTV 119
H D ++ + DD+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TV
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 120 ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
A+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q6PEC4|SKP1_RAT S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1
PE=2 SV=3
Length = 163
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 117/159 (73%), Gaps = 7/159 (4%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCK 61
I L+SSDGE FEV+ +A +S TIK M+ED + D +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KH--VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTV 119
H D ++ + DD+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TV
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 120 ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
A+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q9WTX5|SKP1_MOUSE S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1
SV=3
Length = 163
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 117/159 (73%), Gaps = 7/159 (4%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCK 61
I L+SSDGE FEV+ +A +S TIK M+ED + D +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KH--VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTV 119
H D ++ + DD+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TV
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 120 ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
A+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q9M1X4|ASK5_ARATH SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1
Length = 153
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 116/159 (72%), Gaps = 15/159 (9%)
Query: 6 KITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVE 65
KI LKSSDG++FE++E VA +S I HMVED CA VIPL NVTS IL VI+YC+KHV+
Sbjct: 4 KIMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKHVK 63
Query: 66 AGSGDKKDDKSTEDDLKTWDADFVK-VDQNTLFDLILAANYLNIKGLLDLTCQTV----- 119
+ E+DLK WDADF+K ++ LFD+++AANYLNI+ LLDLTC+TV
Sbjct: 64 SKE---------EEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQ 114
Query: 120 ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
AD++ GKTP+EIR FNI+ND + +E ++R ENQWAF+
Sbjct: 115 ADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQWAFQ 153
>sp|Q1PEL7|ASK15_ARATH SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2
Length = 177
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 120/166 (72%), Gaps = 10/166 (6%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK 62
S KI L SSDGE+F+VEE VA + Q +KH++EDDC IPL NVT ILS V+EYCKK
Sbjct: 2 SSNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKK 61
Query: 63 HVEAGSGD--------KKDDKSTEDDLKTWDADFVK-VDQNTLFDLILAANYLNIKGLLD 113
HV+ D KK D + +L WDA+F+K +D T+F LILAANYLN++GLL
Sbjct: 62 HVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLG 121
Query: 114 LTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEE-VRRENQWAFE 158
LTCQTVAD IK KTPEE+R+ FNI+NDF+ +EEEE +R+EN WAFE
Sbjct: 122 LTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167
>sp|Q5KU00|SKP1_ASPOR E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=sconC PE=3 SV=1
Length = 161
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 111/154 (72%), Gaps = 5/154 (3%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVEDDCADT--VIPLPNVTSTILSKVIEYCKKHV 64
+T SSDG VE VA SQ IK+M+ED +T IP+PNV +L KVIE+C H
Sbjct: 6 LTFTSSDGVDIPVERDVAERSQLIKNMLED-LGETGEPIPIPNVNEAVLKKVIEWCTHHK 64
Query: 65 E--AGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADM 122
+GD D + D+ WD F++VDQ LF++ILAANYL+IKGLLD+ C+TVA+M
Sbjct: 65 NDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKGLLDVGCKTVANM 124
Query: 123 IKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 156
IKGK+PEEIRKTFNI+NDF+P+EE+++RREN+WA
Sbjct: 125 IKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|B8NSJ0|SKP1_ASPFN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=sconC PE=3 SV=1
Length = 161
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 111/154 (72%), Gaps = 5/154 (3%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVEDDCADT--VIPLPNVTSTILSKVIEYCKKHV 64
+T SSDG VE VA SQ IK+M+ED +T IP+PNV +L KVIE+C H
Sbjct: 6 LTFTSSDGVDIPVERDVAERSQLIKNMLED-LGETGEPIPIPNVNEAVLKKVIEWCTHHK 64
Query: 65 E--AGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADM 122
+GD D + D+ WD F++VDQ LF++ILAANYL+IKGLLD+ C+TVA+M
Sbjct: 65 NDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKGLLDVGCKTVANM 124
Query: 123 IKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 156
IKGK+PEEIRKTFNI+NDF+P+EE+++RREN+WA
Sbjct: 125 IKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|Q9LSY1|ASK8_ARATH SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1
Length = 152
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 114/157 (72%), Gaps = 7/157 (4%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC-K 61
S KKI LKSS+G+TFE+EE A + QTI HM+E +C D VI + +TS IL VIEYC K
Sbjct: 2 STKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNK 61
Query: 62 KHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVAD 121
HV+A + ++DDL+ WD +F++ D++T+F L AAN+LN K LL L QTVAD
Sbjct: 62 HHVDAA------NPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVAD 115
Query: 122 MIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
MIKG TP+++R+ FNI+ND +P+EE +RREN+WAFE
Sbjct: 116 MIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE 152
>sp|C5FHU9|SKP1_ARTOC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
(strain ATCC MYA-4605 / CBS 113480) GN=sconC PE=3 SV=1
Length = 165
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 114/160 (71%), Gaps = 6/160 (3%)
Query: 2 SSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADT--VIPLPNVTSTILSKVIEY 59
++ KITL SSDG +E VA S IK+M+ED D+ IP+PNV ++L KVIE+
Sbjct: 4 TATSKITLTSSDGVEITIERQVAERSILIKNMLED-LGDSGEAIPIPNVNESVLKKVIEW 62
Query: 60 CKKH---VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTC 116
CK H + D D + D+ WD F++VDQ LF++ILAANYL+IK LLD+ C
Sbjct: 63 CKHHKGDPPSTGDDDVDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGC 122
Query: 117 QTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 156
+TVA+MIKGK+PEEIRKTFNI+NDF+P+EE+++RREN+WA
Sbjct: 123 KTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 162
>sp|A1CZG3|SKP1_NEOFI E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=sconC PE=3 SV=1
Length = 158
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 111/155 (71%), Gaps = 3/155 (1%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKVIEYCKKHVE 65
+TL SSDG V+ VA S IK+M+ED +D IP+PNV +L KVIE+C H
Sbjct: 4 VTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCTHHKN 63
Query: 66 --AGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMI 123
+GD D + D+ WD F++VDQ LF++ILAANYL+IK LLD+ C+TVA+MI
Sbjct: 64 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANMI 123
Query: 124 KGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
KGK+PEEIRKTFNI+NDF+P+EE+++RREN+WA E
Sbjct: 124 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 158
>sp|Q4WTT8|SKP1_ASPFU E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=sconC PE=3 SV=1
Length = 158
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 111/155 (71%), Gaps = 3/155 (1%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKVIEYCKKHVE 65
+TL SSDG V+ VA S IK+M+ED +D IP+PNV +L KVIE+C H
Sbjct: 4 VTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCTHHKN 63
Query: 66 --AGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMI 123
+GD D + D+ WD F++VDQ LF++ILAANYL+IK LLD+ C+TVA+MI
Sbjct: 64 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANMI 123
Query: 124 KGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
KGK+PEEIRKTFNI+NDF+P+EE+++RREN+WA E
Sbjct: 124 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 158
>sp|B0Y3B5|SKP1_ASPFC E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=sconC PE=3 SV=1
Length = 158
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 111/155 (71%), Gaps = 3/155 (1%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKVIEYCKKHVE 65
+TL SSDG V+ VA S IK+M+ED +D IP+PNV +L KVIE+C H
Sbjct: 4 VTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCTHHKN 63
Query: 66 --AGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMI 123
+GD D + D+ WD F++VDQ LF++ILAANYL+IK LLD+ C+TVA+MI
Sbjct: 64 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANMI 123
Query: 124 KGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
KGK+PEEIRKTFNI+NDF+P+EE+++RREN+WA E
Sbjct: 124 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 158
>sp|Q0CA59|SKP1_ASPTN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=sconC PE=3
SV=1
Length = 161
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 113/162 (69%), Gaps = 5/162 (3%)
Query: 1 MSSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADT--VIPLPNVTSTILSKVIE 58
MS+ + SSDG V+ VA S IK+M+ED +T IP+PNV +L KVIE
Sbjct: 1 MSTSPTLVFTSSDGVDITVDRDVAERSLLIKNMLED-LGETGEAIPIPNVNEAVLKKVIE 59
Query: 59 YCKKHVE--AGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTC 116
+C H +GD D + D+ WD F++VDQ LF++ILAANYL+IKGLLD+ C
Sbjct: 60 WCTHHKNDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKGLLDVGC 119
Query: 117 QTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
+TVA+MIKGK+PEEIRKTFNI+NDF+P+EE+++RREN+WA E
Sbjct: 120 KTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 161
>sp|D4ARL8|SKP1_ARTBC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma
benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=sconC
PE=3 SV=1
Length = 164
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 115/162 (70%), Gaps = 6/162 (3%)
Query: 2 SSEKKITLKSSDGETFEVEETVALESQTIKHMVED--DCADTVIPLPNVTSTILSKVIEY 59
++ KITL SSDG +E VA S IK+M+ED D + IP+PNV ++L KVIE+
Sbjct: 4 TATNKITLTSSDGVEVTIERQVAERSILIKNMLEDLGDSGEP-IPIPNVNESVLKKVIEW 62
Query: 60 CKKH---VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTC 116
C+ H + D D + D+ WD F++VDQ LF++ILAANYL+IK LLD+ C
Sbjct: 63 CEHHKGDPPSTGDDDVDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGC 122
Query: 117 QTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
+TVA+MIKGK+PEEIRKTFNI+NDF+P+EE+++RREN+WA E
Sbjct: 123 KTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 164
>sp|A1C9U5|SKP1_ASPCL E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=sconC PE=3 SV=1
Length = 159
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 110/155 (70%), Gaps = 3/155 (1%)
Query: 7 ITLKSSDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKVIEYCKKHVE 65
+TL SSDG V+ VA S IK+M+ED + IP+PNV +L KVIE+C H
Sbjct: 5 VTLTSSDGVDLTVDRDVAERSVLIKNMLEDLGESGEAIPIPNVNEVVLKKVIEWCTHHKN 64
Query: 66 --AGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMI 123
+GD D + D+ WD F++VDQ LF++ILAANYL+IK LLD+ C+TVA+MI
Sbjct: 65 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANMI 124
Query: 124 KGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 158
KGK+PEEIRKTFNI+NDF+P+EE+++RREN+WA E
Sbjct: 125 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 159
>sp|Q8TGW7|SKP1_ARTOT E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
GN=sconC PE=2 SV=1
Length = 165
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 114/160 (71%), Gaps = 6/160 (3%)
Query: 2 SSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADT--VIPLPNVTSTILSKVIEY 59
++ KITL SSDG ++ VA S IK+M++D D+ IP+PNV ++L KVIE+
Sbjct: 4 AATSKITLTSSDGVDITIDRQVAERSILIKNMLKD-LGDSGEAIPIPNVNESVLKKVIEW 62
Query: 60 CKKH---VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTC 116
CK H + D D + D+ WD F++VDQ LF++ILAANYL+IK LLD+ C
Sbjct: 63 CKHHKGDPPSTGDDDVDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGC 122
Query: 117 QTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 156
+TVA+MIKGK+PEEIRKTFNI+NDF+P+EE+++RREN+WA
Sbjct: 123 KTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 162
>sp|Q8NK13|SKP1_NEUCR E3 ubiquitin ligase complex SCF subunit scon-3 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=scon-3 PE=1 SV=1
Length = 171
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 115/159 (72%), Gaps = 7/159 (4%)
Query: 5 KKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTV----IPLPNVTSTILSKVIEYC 60
+K++L+S+DG+ V+ VA S IK+++ED + V IPLPNV +L KV+E+C
Sbjct: 10 QKVSLQSNDGQIITVDRVVAERSLLIKNLIEDLGDEAVMNEAIPLPNVNEPVLRKVVEWC 69
Query: 61 KKHVE---AGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQ 117
+ H + + D+ D + ++ WD F++VDQ LF++ILAANY++IK LLD+ C+
Sbjct: 70 EHHRKDPPQTTEDENDSRKKSTEIDEWDQKFMQVDQEMLFEIILAANYMDIKPLLDVGCK 129
Query: 118 TVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 156
TVA+MIKGK+PEEIRKTFNI NDF+P+EEE++RREN+WA
Sbjct: 130 TVANMIKGKSPEEIRKTFNITNDFTPEEEEQIRRENEWA 168
>sp|Q9SY65|ASK18_ARATH SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2
Length = 158
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 115/156 (73%), Gaps = 2/156 (1%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK 62
S KI L SSDGE+FE++E VA + I HM+ED+CA IPL NVT ILSK+IEY K
Sbjct: 2 SSNKILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKM 61
Query: 63 HVEAGSGDKKDDKSTEDDLKTWDADFV-KVDQNTLFDLILAANYLNIKGLLDLTCQTVAD 121
HV S + +D+++ ++ L +WDA F+ K+D T+F +ILAANYLN +GLL QTVAD
Sbjct: 62 HVNEPSEEDEDEEAKKN-LDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVAD 120
Query: 122 MIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAF 157
IK KTPEE+R+ FNI+NDF+P+EEEE+R+EN W F
Sbjct: 121 YIKDKTPEEVREIFNIENDFTPEEEEEIRKENAWTF 156
>sp|B8MDP8|SKP1_TALSN E3 ubiquitin ligase complex SCF subunit sconC OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=sconC PE=3 SV=1
Length = 160
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 114/154 (74%), Gaps = 3/154 (1%)
Query: 6 KITLKSSDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKVIEYCKKHV 64
++TL+SSD VE VA S IK+++ED ++ +P+PNV ++L KVIE+C H
Sbjct: 4 QVTLQSSDQVNITVERAVAERSMLIKNLLEDLGESEEPVPIPNVNESVLKKVIEWCTHHK 63
Query: 65 E--AGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADM 122
+G++ D++ ++ WD F++VDQ LF++ILAANYL+IK LLD+ C+TVA+M
Sbjct: 64 NDPQTTGEEDDNRRRTTEIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANM 123
Query: 123 IKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 156
IKGK+PEEIRKTFNI+NDF+P+EE+++RREN+WA
Sbjct: 124 IKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 157
>sp|B6QGB9|SKP1_PENMQ E3 ubiquitin ligase complex SCF subunit sconC OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=sconC PE=3 SV=1
Length = 160
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 113/154 (73%), Gaps = 3/154 (1%)
Query: 6 KITLKSSDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKVIEYCKKHV 64
++TL+SSD VE VA S IK+++ED ++ +P+PNV ++L KVIE+C H
Sbjct: 4 QVTLQSSDSVDITVERAVAERSMLIKNLLEDLGESEEPVPIPNVNESVLKKVIEWCTHHK 63
Query: 65 E--AGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADM 122
+G+ D++ ++ WD F++VDQ LF++ILAANYL+IK LLD+ C+TVA+M
Sbjct: 64 NDPQSTGEDDDNRRRTTEIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANM 123
Query: 123 IKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 156
IKGK+PEEIRKTFNI+NDF+P+EE+++RREN+WA
Sbjct: 124 IKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 157
>sp|Q5BAX8|SKP1_EMENI E3 ubiquitin ligase complex SCF subunit sconC OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=sconC PE=3 SV=2
Length = 161
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 114/157 (72%), Gaps = 3/157 (1%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADT-VIPLPNVTSTILSKVIEYCK 61
+EK + + S+DG+ EV VA S IK+M+ED T IP+PNV+ +LSKV+E+C
Sbjct: 2 AEKMLVMTSNDGKNIEVPRDVAERSLLIKNMLEDLGDPTEPIPIPNVSENVLSKVLEWCA 61
Query: 62 KH--VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTV 119
H S D D + D++ WD F++VDQ LF++ILAANYL+IK LLD+ C+TV
Sbjct: 62 HHRNDPPSSADDDDSRRKTTDIEEWDQKFMQVDQEMLFEIILAANYLDIKPLLDIGCKTV 121
Query: 120 ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 156
A+MIKGK+PEEIRKTFNI+NDF+P+EE+++RREN+WA
Sbjct: 122 ANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|Q9SL65|ASK17_ARATH SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=1 SV=1
Length = 150
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 109/156 (69%), Gaps = 9/156 (5%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK 62
S KKI L SSD E FE++E VA + Q + HM++DDCAD I L NVT IL+ +IEYCKK
Sbjct: 2 SSKKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKK 61
Query: 63 HVEAGSGDKKDDKSTEDDLKTWDADFVK-VDQNTLFDLILAANYLNIKGLLDLTCQTVAD 121
HV DD +++ TWDA+FVK +D +TLF L+ AA+YL + GL +L Q +AD
Sbjct: 62 HV--------DDVEAKNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIAD 113
Query: 122 MIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAF 157
KT EIR+ FNI+ND++P+EEEE+R++N+WAF
Sbjct: 114 YTADKTVNEIRELFNIENDYTPEEEEELRKKNEWAF 149
>sp|Q9Y709|SKP1_SCHPO Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=skp1 PE=1 SV=1
Length = 161
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 116/158 (73%), Gaps = 9/158 (5%)
Query: 6 KITLKSSDGETFEVEETVALESQTIKHMVEDDCADTV-IPLPNVTSTILSKVIEYCKKH- 63
KI L SSD E F V++ +A S IK+M+ED V IPLPNV+S +L KV+E+C+ H
Sbjct: 3 KIKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEWCEHHK 62
Query: 64 --VEAGSGDKKD---DKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQT 118
+ +G+ ++ D KST D+ WD F+ VDQ LF+++LA+NYL+IK LLD C+T
Sbjct: 63 NDLYSGTEEESDIRLKKST--DIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKT 120
Query: 119 VADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 156
VA+MI+GK+PE+IRKTFNI NDF+P+EEE++R+EN+WA
Sbjct: 121 VANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
>sp|P52286|SKP1_YEAST Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SKP1 PE=1 SV=2
Length = 194
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 91/116 (78%), Gaps = 1/116 (0%)
Query: 42 VIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTED-DLKTWDADFVKVDQNTLFDLI 100
V+P+PNV S++L KVIE+ + H ++ D+ DD S + + +WD +F+KVDQ L+++I
Sbjct: 76 VMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEII 135
Query: 101 LAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 156
LAANYLNIK LLD C+ VA+MI+G++PEEIR+TFNI NDF+P+EE +RREN+WA
Sbjct: 136 LAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191
>sp|Q9LSY0|ASK7_ARATH SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK7 PE=2 SV=1
Length = 125
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 84/122 (68%), Gaps = 7/122 (5%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYC-K 61
S KKI LKSSDG+ FE+EE A + QTI HM+E +C D VIP+ NVTS IL VIEYC K
Sbjct: 2 STKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNK 61
Query: 62 KHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVAD 121
HV+A + +++DLK WD +F++ DQ T+F L+ AA L+IK LL L QTVAD
Sbjct: 62 HHVDAA------NPCSDEDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVAD 115
Query: 122 MI 123
M+
Sbjct: 116 MV 117
>sp|Q1PEF6|ASK6_ARATH SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1
Length = 85
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 65/89 (73%), Gaps = 10/89 (11%)
Query: 28 QTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDAD 87
IK M EDDCAD IPLPNVTS IL VIEYCKKHV +S E+DLK WDA+
Sbjct: 1 MMIKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKHVV---------ESKEEDLKKWDAE 51
Query: 88 FV-KVDQNTLFDLILAANYLNIKGLLDLT 115
F+ K++Q+ LFD+++AANYLNI+ LLDLT
Sbjct: 52 FMKKMEQSILFDVMMAANYLNIQSLLDLT 80
>sp|A8MQG7|ASK20_ARATH SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 PE=2 SV=1
Length = 352
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 84/147 (57%), Gaps = 13/147 (8%)
Query: 7 ITLKSSDGETFEVEETVALESQTI-KHMVEDDCADT---VIPLP-NVTSTILSKVIEYCK 61
I L+++DG +VE+ VA+ I + +++ + I LP V + S +++YC+
Sbjct: 18 IWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDYCR 77
Query: 62 KHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVAD 121
H G +K + KT+D F+++D L +L AA+ L +K L+DLT + +A
Sbjct: 78 FHQLPGRSNK--------ERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129
Query: 122 MIKGKTPEEIRKTFNIKNDFSPDEEEE 148
+I+GK PEEIR+ F++ +D + +E+ E
Sbjct: 130 IIEGKNPEEIREIFHLPDDLTEEEKLE 156
>sp|Q8LF97|ASK21_ARATH SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1
Length = 351
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 84/147 (57%), Gaps = 13/147 (8%)
Query: 7 ITLKSSDGETFEVEETVALESQTI-KHMVEDDCADT---VIPLPN-VTSTILSKVIEYCK 61
I L+++DG +VE+ VA+ I + +++ + I LP V +LS + +YC+
Sbjct: 18 IWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDYCR 77
Query: 62 KHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVAD 121
H G +K + K +D F+++D L +L AA+ L +K L+DLT + +A
Sbjct: 78 FHQVPGRSNK--------ERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129
Query: 122 MIKGKTPEEIRKTFNIKNDFSPDEEEE 148
+I+GKTPEEIR+ F++ +D + +E+ E
Sbjct: 130 IIEGKTPEEIREIFHLPDDLTEEEKLE 156
>sp|Q751F9|ELOC_ASHGO Elongin-C OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC
9923 / NRRL Y-1056) GN=ELC1 PE=3 SV=1
Length = 100
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 14/111 (12%)
Query: 1 MSSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCA---DTVIPLPNVTSTILSKVI 57
M+ +TL SSDG++FEV A+ S T+ M++ A + + LP + S++L+KV+
Sbjct: 1 MTPTSHVTLVSSDGKSFEVPRERAMLSPTLAKMLDSSFAEAKEAKVTLPTIESSMLAKVV 60
Query: 58 EYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNI 108
EY + E KDD +D+ ++ V +L+LAA+YL I
Sbjct: 61 EYLEYLEEY---KHKDDG---EDIPQFE-----VPPEISLELLLAADYLQI 100
>sp|Q03071|ELOC_YEAST Elongin-C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ELC1 PE=1 SV=1
Length = 99
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 3 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADT--VIPLPNVTSTILSKVIEYC 60
S+ +TL S D + +E+ + A+ S T+K M+E ++ I L S IL K +EY
Sbjct: 2 SQDFVTLVSKDDKEYEISRSAAMISPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEYL 61
Query: 61 KKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNI 108
+++ + DD+ E ++ T +L+LAA+YL+I
Sbjct: 62 NYNLKYSGVSEDDDEIPEFEIPT----------EMSLELLLAADYLSI 99
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.129 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,173,588
Number of Sequences: 539616
Number of extensions: 2359257
Number of successful extensions: 6198
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 6055
Number of HSP's gapped (non-prelim): 89
length of query: 158
length of database: 191,569,459
effective HSP length: 108
effective length of query: 50
effective length of database: 133,290,931
effective search space: 6664546550
effective search space used: 6664546550
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)