BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031499
(158 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Danio rerio GN=ergic3 PE=2 SV=1
Length = 383
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 26/160 (16%)
Query: 1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
+ VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ G + T
Sbjct: 58 LFVDTSRGDKLRINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGQPVTT 117
Query: 61 EYLTDLVEKEHE-------------EHKHDHNKD------HKDDIDEKLHAFGFDEDAEN 101
E + KE E E + D DD+ E G+ +
Sbjct: 118 EAEKHDLGKEEEGVFDPSTLDPDRCESCYGAETDDLKCCNTCDDVREAYRRRGWAFKTPD 177
Query: 102 MIKKVKH-------ALESGEGCRVYGVLDVQRVAGNFHIS 134
I++ K + EGC+VYG L+V +VAGNFH +
Sbjct: 178 TIEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFA 217
>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment
protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3
SV=1
Length = 383
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 34/164 (20%)
Query: 1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
+ VD RGE L I++++TF LPC LS+DA+D+SG+H+ D+ NI+K RL+ G I
Sbjct: 57 LFVDTTRGEKLKINMDITFHHLPCAYLSLDAMDVSGEHQFDVAHNIFKKRLSPTGQPI-- 114
Query: 61 EYLTDLVEKEHEEHKHDHNKDHKDDI---------------------DEKLHAF---GFD 96
+ +E E +K + KD+ D + +E A+ G+
Sbjct: 115 --IEAPPIREEEINKKESVKDNNDVVGCGSCYGAEDPSKGIGCCNTCEEVRVAYSKKGWG 172
Query: 97 EDAENMIKKVKHAL------ESGEGCRVYGVLDVQRVAGNFHIS 134
D + + ++ ++GEGC+VYG + V +VAGNFH +
Sbjct: 173 LDPSGIPQCIREGFTKNLVEQNGEGCQVYGFILVNKVAGNFHFA 216
>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Bos taurus GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 26/160 (16%)
Query: 1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
+ VD RG+ L I+IN+ FP +PC LS+DA+D++G+ ++D++ N++K RL+ G + +
Sbjct: 58 LYVDKSRGDKLKININVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKKRLDKDGFPVSS 117
Query: 61 E-------------YLTDLVEKEHEEHKHDHNKD------HKDDIDEKLHAFGFDEDAEN 101
E + D ++ + E + + +D+ E G+ +
Sbjct: 118 EAERHELGKVEVKVFDPDSLDPDRCESCYGAEMEDIKCCNSCEDVREAYRRRGWAFKNPD 177
Query: 102 MIKKV-------KHALESGEGCRVYGVLDVQRVAGNFHIS 134
I++ K + EGC+VYG L+V +VAGNFH +
Sbjct: 178 TIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFA 217
>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1
Length = 382
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 37/165 (22%)
Query: 1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
+ VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ G + +
Sbjct: 58 LYVDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGTPVSS 117
Query: 61 EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAE-----NMIKKVKHAL----- 110
E + HE K + D +D + +AE N + V+ A
Sbjct: 118 E------AERHELGKVEVTVFGPDSLDPDRCESCYGAEAEDIKCCNTCEDVREAYRRRGA 171
Query: 111 ---------------------ESGEGCRVYGVLDVQRVAGNFHIS 134
+ EGC+VYG L+V +VAGNFH +
Sbjct: 172 FKNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFA 216
>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1
Length = 384
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 27/159 (16%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ + +E
Sbjct: 60 VDKSRGDKLKINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDKKPVTSEA 119
Query: 63 LTDLVEKEHE-----EHKHDHNK---------------DHKDDIDEKLHAFGFDEDAENM 102
+ K E D N+ + DD+ E G+ +
Sbjct: 120 DRHELGKSEEHVVFDPKSLDPNRCESCYGAETDDFSCCNTCDDVREAYRRRGWAFKTPDS 179
Query: 103 IKKVKH-------ALESGEGCRVYGVLDVQRVAGNFHIS 134
I++ K + EGC+VYG L+V +VAGNFH +
Sbjct: 180 IEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFA 218
>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus laevis GN=ergic3 PE=2 SV=1
Length = 389
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 27/159 (16%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ + +E
Sbjct: 60 VDKSRGDKLKINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDLDKKPVTSEA 119
Query: 63 LTDLVEKEHEE-----HKHDHNK---------------DHKDDIDEKLHAFGFDEDAENM 102
+ K E+ D N+ + DD+ E G+ +
Sbjct: 120 DRHELGKSEEQVVFDPKTLDPNRCESCYGAETDDFSCCNSCDDVREAYRRKGWAFKTPDS 179
Query: 103 IKKVKH-------ALESGEGCRVYGVLDVQRVAGNFHIS 134
I++ K + EGC+VYG L+V +VAGNFH +
Sbjct: 180 IEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFA 218
>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Mus musculus GN=Ergic3 PE=2 SV=1
Length = 383
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 26/160 (16%)
Query: 1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
+ VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ G + +
Sbjct: 58 LYVDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKKRLDKDGVPVSS 117
Query: 61 EY----LTDLVEKEHEEHKHDHNK---------------DHKDDIDEKLHAFGFDEDAEN 101
E L + + + D N+ + +D+ E G+ +
Sbjct: 118 EAERHELGKVEVTVFDPNSLDPNRCESCYGAESEDIKCCNSCEDVREAYRRRGWAFKNPD 177
Query: 102 MIKKV-------KHALESGEGCRVYGVLDVQRVAGNFHIS 134
I++ K + EGC+VYG L+V +VAGNFH +
Sbjct: 178 TIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFA 217
>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Homo sapiens GN=ERGIC3 PE=1 SV=1
Length = 383
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 38/166 (22%)
Query: 1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
+ VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ G + +
Sbjct: 58 LYVDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSS 117
Query: 61 EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAE-----NMIKKVKHAL----- 110
E + HE K + D +D + +AE N + V+ A
Sbjct: 118 E------AERHELGKVEVTVFDPDSLDPDRCESCYGAEAEDIKCCNTCEDVREAYRRRGW 171
Query: 111 ----------------------ESGEGCRVYGVLDVQRVAGNFHIS 134
+ EGC+VYG L+V +VAGNFH +
Sbjct: 172 AFKNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFA 217
>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Pongo abelii GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 26/160 (16%)
Query: 1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
+ VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ G + +
Sbjct: 58 LYVDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSS 117
Query: 61 E-------------YLTDLVEKEHEEHKHDHNKD------HKDDIDEKLHAFGFDEDAEN 101
E + D ++ + E + + +D+ E G+ +
Sbjct: 118 EAERHELGKVEVTVFDPDSLDPDRCESCYGAEAEDIKCCNTCEDVRETYRRRGWAFKNPD 177
Query: 102 MIKKV-------KHALESGEGCRVYGVLDVQRVAGNFHIS 134
I++ K + EGC+VYG L+V +VAGNFH +
Sbjct: 178 TIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFA 217
>sp|Q09895|YAI8_SCHPO Uncharacterized protein C24B11.08c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.08c PE=3 SV=1
Length = 390
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 26/157 (16%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
V+ G+ + I+ N+TFP +PC +L+VD +D+SG+ + D+ + K RL+ G II +
Sbjct: 60 VNPSHGDRMEINFNITFPRIPCQILTVDVLDVSGEFQRDIHHTVSKTRLSPSGEIISVDD 119
Query: 63 LTDLVEKEH---------------EEHKHDHNKDHKDDIDEKLHAFG------FDEDAEN 101
L D+ ++ + + + D A+G D DA
Sbjct: 120 L-DIGNQQSISDDGAAECGDCYGAADFAPEDTPGCCNTCDAVRDAYGKAHWRIGDVDAFK 178
Query: 102 MIK----KVKHALESGEGCRVYGVLDVQRVAGNFHIS 134
K K + + EGC + G L V R+AGNFHI+
Sbjct: 179 QCKDENFKELYEAQKVEGCNLAGQLSVNRMAGNFHIA 215
>sp|P39727|ERV46_YEAST ER-derived vesicles protein ERV46 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV46 PE=1 SV=2
Length = 415
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 38/170 (22%)
Query: 1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVD-LDTNIWKLRLNSYGHIIG 59
+ VD R L +++++TFP++PCD++++D +D SG+ ++D LD RLNS G +G
Sbjct: 57 LVVDRDRHAKLELNMDVTFPSMPCDLVNLDIMDDSGEMQLDILDAGFTMSRLNSEGRPVG 116
Query: 60 --------------------TEYLTDLVEKEHEEHKHDHNKDHK---DDIDEKLHAF--- 93
Y + + + ++ K D D A+
Sbjct: 117 DATELHVGGNGDGTAPVNNDPNYCGPCYGAKDQSQNENLAQEEKVCCQDCDAVRSAYLEA 176
Query: 94 ---GFDE------DAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHIS 134
FD + E + K+ L EGCR+ G + R+ GN H +
Sbjct: 177 GWAFFDGKNIEQCEREGYVSKINEHLN--EGCRIKGSAQINRIQGNLHFA 224
>sp|O94283|ERV41_SCHPO ER-derived vesicles protein 41 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=erv41 PE=1 SV=1
Length = 333
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 25/129 (19%)
Query: 9 ETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVE 68
E + ++I++T A+PC L +D +D + DL ++ TE LT +E
Sbjct: 70 ELMDLNIDITI-AMPCSNLRIDVVDRTK----DL--------------VLATEALT--LE 108
Query: 69 KEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVA 128
+ + + +K+D L E KK SG CR+YG L V RV
Sbjct: 109 EAFIKDMPTSSTIYKNDRYAGLRW----ARTEKFRKKNNAEPGSGTACRIYGQLVVNRVN 164
Query: 129 GNFHISVHG 137
G HI+ G
Sbjct: 165 GQLHITAPG 173
>sp|Q9LJU2|PDI53_ARATH Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3
PE=2 SV=1
Length = 483
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 8 GETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLV 67
G+ L I N++FPAL C+ SVD D+ G + +++ + K ++ + G E+ + L
Sbjct: 66 GDFLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFPIDPHLRSTGAEFHSGLA 125
Query: 68 EKEHEEHKHDHNKDHKDDIDEKL 90
HN +H ++ E+
Sbjct: 126 L---------HNINHGEETKEEF 139
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 70 EHEEHKHDHNKDHKDDIDEKL--------HAFGFDEDAENMIKKVKHALESGEGCRVYGV 121
EHE + D + D + E L H D + + +K +K +G GCRV G
Sbjct: 241 EHESYYGDRDTDSIVKMVEGLVAPIHPETHKVALDGKSNDTVKHLKKGPVTG-GCRVEGY 299
Query: 122 LDVQRVAGNFHISVH 136
+ V++V GN IS H
Sbjct: 300 VRVKKVPGNLVISAH 314
>sp|Q9T042|PDI54_ARATH Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4
PE=2 SV=1
Length = 480
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 8 GETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
G+ L + N++FP+L C+ SVD D+ G + +++ I K ++S G+E+
Sbjct: 66 GDFLRLDFNISFPSLSCEFASVDVSDVLGTNRLNVTKTIRKFSIDSNMRPTGSEF 120
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 91 HAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVH 136
H ++ ++N + +K A +G GCRV G + V++V GN +S
Sbjct: 270 HNLALEDKSDNSSRTLKKAPSTG-GCRVEGYMRVKKVPGNLMVSAR 314
>sp|Q69SA9|PDI54_ORYSJ Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp.
japonica GN=PDIL5-4 PE=2 SV=1
Length = 485
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 8 GETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLV 67
GE L I N++FPAL C+ SVD D+ G + +++ + K ++ G+E+ +
Sbjct: 66 GEFLRIDFNLSFPALSCEFASVDVSDVLGTNRLNITKTVRKYSIDRNLVPTGSEFHPGPI 125
Query: 68 EKEHEEHKHDHNKDHKDDIDEKLHAFGFD 96
+H D ++H DD L + FD
Sbjct: 126 PTV-SKHGDDVEENH-DDGSVPLSSRNFD 152
>sp|Q6NS19|ERGI1_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Xenopus laevis GN=ergic1 PE=2 SV=1
Length = 290
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 4 DLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRL-NSYG 55
D G + + +N+T P LPC+V+ +D D G+HEV N K+ + N+YG
Sbjct: 62 DKDSGGKIDVTLNVTLPNLPCEVVGLDIQDEMGRHEVGHIDNSMKIPINNAYG 114
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 106 VKHALESGEGCRVYGVLDVQRVAGNFHISVH 136
+K + + GCR G+ + +V GNFH+S H
Sbjct: 105 MKIPINNAYGCRFEGLFSINKVPGNFHVSTH 135
>sp|Q9DC16|ERGI1_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Mus musculus GN=Ergic1 PE=1 SV=1
Length = 290
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 106 VKHALESGEGCRVYGVLDVQRVAGNFHISVH 136
+K L +G GCR G + +V GNFH+S H
Sbjct: 105 MKIPLNNGAGCRFEGQFSINKVPGNFHVSTH 135
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 4 DLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS 53
D G + + +N++ P L C+++ +D D G+HEV N K+ LN+
Sbjct: 62 DKDSGGKIDVSLNISLPNLHCELVGLDIQDEMGRHEVGHIDNSMKIPLNN 111
>sp|Q969X5|ERGI1_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Homo sapiens GN=ERGIC1 PE=1 SV=1
Length = 290
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 106 VKHALESGEGCRVYGVLDVQRVAGNFHISVH 136
+K L +G GCR G + +V GNFH+S H
Sbjct: 105 MKIPLNNGAGCRFEGQFSINKVPGNFHVSTH 135
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 4 DLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS 53
D G + + +N++ P L C+++ +D D G+HEV N K+ LN+
Sbjct: 62 DKDSGGKIDVSLNISLPNLHCELVGLDIQDEMGRHEVGHIDNSMKIPLNN 111
>sp|Q4V8Y6|ERGI1_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Danio rerio GN=ergic1 PE=2 SV=1
Length = 290
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 46/133 (34%), Gaps = 59/133 (44%)
Query: 4 DLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYL 63
D G + + +N++ P L CD++ +D D G+HEV GHI
Sbjct: 62 DKDSGGKIDVSLNISLPNLHCDLVGLDIQDEMGRHEV--------------GHI------ 101
Query: 64 TDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLD 123
EN +K L +G GCR G
Sbjct: 102 ------------------------------------EN---SMKVPLNNGHGCRFEGEFS 122
Query: 124 VQRVAGNFHISVH 136
+ +V GNFH+S H
Sbjct: 123 INKVPGNFHVSTH 135
>sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Macaca fascicularis GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 111 ESGEGCRVYGVLDVQRVAGNFHISV 135
+S + CR++G L V +VAGNFHI+V
Sbjct: 165 QSPDACRIHGHLYVNKVAGNFHITV 189
>sp|Q96RQ1|ERGI2_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Homo sapiens GN=ERGIC2 PE=1 SV=2
Length = 377
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 94 GFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISV 135
F + + + + +S CR++G L V +VAGNFHI+V
Sbjct: 148 AFKSTSTALPPREDDSSQSPNACRIHGHLYVNKVAGNFHITV 189
>sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Gecko japonicus GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 111 ESGEGCRVYGVLDVQRVAGNFHISV 135
+ + CR++G L V +VAGNFHI+V
Sbjct: 165 QPPDACRIHGHLYVNKVAGNFHITV 189
>sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Mus musculus GN=Ergic2 PE=2 SV=1
Length = 377
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 112 SGEGCRVYGVLDVQRVAGNFHISV 135
+ + CR++G L V +VAGNFHI+V
Sbjct: 166 TPDACRIHGHLYVNKVAGNFHITV 189
>sp|Q7T2D4|ERGI2_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Danio rerio GN=ergic2 PE=2 SV=1
Length = 376
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 8/44 (18%)
Query: 100 ENMIKKVKHALESGE--------GCRVYGVLDVQRVAGNFHISV 135
+N++K AL E CR++G L V +VAGNFHI+V
Sbjct: 145 KNVMKGSPTALPPREDDPNQPLNACRIHGHLYVNKVAGNFHITV 188
>sp|Q04651|ERV41_YEAST ER-derived vesicles protein ERV41 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV41 PE=1 SV=1
Length = 352
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 95 FDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMVSSFRSVFY 154
FDE N K L GC V+G + V RV+G I+ L YVA + + +
Sbjct: 146 FDESDPN-----KAHLPEFNGCHVFGSIPVNRVSGELQITAKSLG-YVASRKAPLEELKF 199
Query: 155 SYVI 158
++VI
Sbjct: 200 NHVI 203
>sp|Q6C0K9|BYE1_YARLI Transcription factor BYE1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=BYE1 PE=3 SV=1
Length = 822
Score = 31.6 bits (70), Expect = 2.0, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 65 DLVEKEHE-EHKHDHNKDHKDDID 87
DL + E + EH HDHN DH+D ++
Sbjct: 414 DLAQGESDHEHDHDHNSDHEDKVN 437
>sp|P97924|KALRN_RAT Kalirin OS=Rattus norvegicus GN=Kalrn PE=1 SV=3
Length = 2959
Score = 30.0 bits (66), Expect = 5.4, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 63 LTDLVEKEHEEHKHDHNKDH--KDDIDEKLHAFGFDEDAENMIKKVKHALE------SGE 114
+T L++K H +H H H K +D+ F++DAE M + H E +
Sbjct: 263 ITSLLDKLHSTRQHLHQMWHVRKLKLDQCFQLRLFEQDAEKMFDWISHNKELFLQSHTEI 322
Query: 115 GCRVYGVLDVQRVAGNFHISVHGLNIYV 142
G LD+Q + H +++ +N YV
Sbjct: 323 GVSYQHALDLQ--TQHNHFAMNSMNAYV 348
>sp|A2CG49|KALRN_MOUSE Kalirin OS=Mus musculus GN=Kalrn PE=1 SV=1
Length = 2964
Score = 30.0 bits (66), Expect = 5.4, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 63 LTDLVEKEHEEHKHDHNKDH--KDDIDEKLHAFGFDEDAENMIKKVKHALE------SGE 114
+T L++K H +H H H K +D+ F++DAE M + H E +
Sbjct: 263 ITSLLDKLHSTRQHLHQMWHVRKLKLDQCFQLRLFEQDAEKMFDWISHNKELFLQSHTEI 322
Query: 115 GCRVYGVLDVQRVAGNFHISVHGLNIYV 142
G LD+Q + H +++ +N YV
Sbjct: 323 GVSYQHALDLQ--TQHNHFAMNSMNAYV 348
>sp|A7EQA8|INO80_SCLS1 Putative DNA helicase INO80 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=INO80 PE=3 SV=1
Length = 1707
Score = 30.0 bits (66), Expect = 6.8, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 21/94 (22%)
Query: 32 IDMSGKHEVDLDTNIWKLRLNS-------YGHIIGTEYLTDLVEKEHEE------HKHDH 78
I+ + K E D + N K +LN Y H IG + TD VE+ + K DH
Sbjct: 689 IENAKKAEADREANRQKRKLNFLISQTELYSHFIGKKIKTDEVERSTDHPDVAVPDKADH 748
Query: 79 NKDHKDDIDE--------KLHAFGFDEDAENMIK 104
K D+ E FD + E+++K
Sbjct: 749 AKPDHGDLPEGTAPAKVTNFEDLDFDAEDESVLK 782
>sp|O60229|KALRN_HUMAN Kalirin OS=Homo sapiens GN=KALRN PE=1 SV=2
Length = 2985
Score = 29.6 bits (65), Expect = 7.0, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 63 LTDLVEKEHEEHKHDHNKDH--KDDIDEKLHAFGFDEDAENMIKKVKHALE------SGE 114
+T L++K H +H H H K +D+ F++DAE M + H E +
Sbjct: 281 ITSLLDKLHSTRQHLHQMWHVRKLKLDQCFQLRLFEQDAEKMFDWISHNKELFLQSHTEI 340
Query: 115 GCRVYGVLDVQRVAGNFHISVHGLNIYV 142
G LD+Q + H +++ +N YV
Sbjct: 341 GVSYQYALDLQ--TQHNHFAMNSMNAYV 366
>sp|Q123B6|SYR_POLSJ Arginine--tRNA ligase OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=argS PE=3 SV=1
Length = 561
Score = 29.6 bits (65), Expect = 7.3, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 13/104 (12%)
Query: 25 DVLSVDAIDMSG----KHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEKEHEEHKHDHNK 80
DV +DAI +HE DLD + +R ++Y ++ + Y + V+ ++ K D K
Sbjct: 229 DVEDIDAIRQFAVAYLRHEQDLDLRAFSVRFDNY-YLESSLYSSGRVDSAVQKLK-DAGK 286
Query: 81 DHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDV 124
++ D L + + +D + ++KK G+G Y V DV
Sbjct: 287 TYEQDGALWLKSTDYGDDKDRVMKK-------GDGSYTYFVPDV 323
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,337,649
Number of Sequences: 539616
Number of extensions: 2777692
Number of successful extensions: 9410
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 9205
Number of HSP's gapped (non-prelim): 176
length of query: 158
length of database: 191,569,459
effective HSP length: 108
effective length of query: 50
effective length of database: 133,290,931
effective search space: 6664546550
effective search space used: 6664546550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)