BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031500
(158 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q01417|PM1_SOYBN 18 kDa seed maturation protein OS=Glycine max GN=GMPM1 PE=2 SV=1
Length = 173
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 115/165 (69%), Gaps = 10/165 (6%)
Query: 2 QSMKESAANVAASAKAGMEKTKATAQEKVDKMKAHDPVEKEMATEKKEERRMQAELEKQE 61
+S+KE+A N+ ASAKAGMEKTKAT QEK ++M A DPV+KE+AT+KKE + QAEL+KQ
Sbjct: 9 ESIKETATNIGASAKAGMEKTKATVQEKAERMTARDPVQKELATQKKEAKMNQAELDKQA 68
Query: 62 AREHNSAAKQA---------TGGLGYTTADSYSHSTTGMHGRPTGGQQMSALAGHGTGQP 112
AR+HN+AAKQ+ T + ++STTG +G+P G Q SA+ GHGTGQP
Sbjct: 69 ARQHNTAAKQSATTAGHMGHGHHTTGTGTGTATYSTTGEYGQPMGAHQTSAMPGHGTGQP 128
Query: 113 AGQMTEGVVGSHPMGVNTGTGHNP-AHNTRVGGGGGATGYGTGGS 156
G +TEGVVGSHP+G N G G AHNTR GG GYGTGG+
Sbjct: 129 TGHVTEGVVGSHPIGTNRGPGGTATAHNTRAGGKPNDYGYGTGGT 173
>sp|P09441|LEA13_GOSHI Late embryogenesis abundant protein D-113 OS=Gossypium hirsutum
PE=2 SV=2
Length = 165
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 54/69 (78%), Gaps = 4/69 (5%)
Query: 1 MQSMKESAANVAASAKAGMEKTKATAQEKVDKMKAHDPVEKEMATEKKEERRMQAELEKQ 60
MQSMK++AA SAKAGMEK KA+ QEKVD+MK DP EKEMA E+KEER+ AEL KQ
Sbjct: 1 MQSMKDAAA----SAKAGMEKAKASMQEKVDQMKTRDPNEKEMARERKEERQEDAELRKQ 56
Query: 61 EAREHNSAA 69
EAR HN+ A
Sbjct: 57 EARHHNATA 65
>sp|P46515|LEA11_HELAN 11 kDa late embryogenesis abundant protein OS=Helianthus annuus
PE=2 SV=1
Length = 104
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 61/81 (75%), Gaps = 6/81 (7%)
Query: 18 GMEKTKATAQEKVDKMKAHDPVEKEMATEKKEERRMQAELEKQEAREHNSAAKQATG-GL 76
GMEKTKA+ QEK +KM AHDP++KEMA EKKEER+ +AE EKQ A+EHN+A KQ TG G
Sbjct: 25 GMEKTKASLQEKGEKMTAHDPMQKEMAREKKEERKHEAEYEKQAAKEHNAAQKQTTGIGT 84
Query: 77 GYTTADSYSHSTTGMHGRPTG 97
G ++S++TT + G TG
Sbjct: 85 G-----THSYTTTNVTGHRTG 100
>sp|Q00747|LE25_SOLLC Protein LE25 OS=Solanum lycopersicum GN=LE25 PE=2 SV=1
Length = 88
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 48/62 (77%)
Query: 10 NVAASAKAGMEKTKATAQEKVDKMKAHDPVEKEMATEKKEERRMQAELEKQEAREHNSAA 69
+ A++AKAGMEKTKA QEK ++M DP++KEMATEKKE+R AE+ K++A+ ++A
Sbjct: 6 DAASAAKAGMEKTKANVQEKAERMTTRDPLKKEMATEKKEDRVAAAEMGKRDAKAQHAAE 65
Query: 70 KQ 71
KQ
Sbjct: 66 KQ 67
>sp|A9A565|SYA_NITMS Alanine--tRNA ligase OS=Nitrosopumilus maritimus (strain SCM1)
GN=alaS PE=3 SV=1
Length = 889
Score = 33.9 bits (76), Expect = 0.37, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 14/139 (10%)
Query: 27 QEKVDKMKAHDPVEKEMATEKKEERRMQAE------LEKQEAREH-NSAAKQATGGLGYT 79
QE+ K KA + V KE +++EE + +A LEK A E S G L +T
Sbjct: 735 QEQESKRKAEEAVAKEQLEKQREENKSKAREKIPVLLEKVLAGEDVESDGINTKGKLCFT 794
Query: 80 TA---DSYSHSTTGMHGRPTGGQQMSALAGHGTGQPAGQMTEGVVGSHPMGVNTGTGHNP 136
+ D Y H G + G +A G P ++ V GVN G
Sbjct: 795 ASSDYDDYFHQNFGK--KLVGKDSTAAFCGVFEAGPTIRVM--VFSGEQSGVNAGEIAKK 850
Query: 137 AHNTRVGGGGGATGYGTGG 155
+ G GGG + GG
Sbjct: 851 IASILGGSGGGDAKFAQGG 869
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.303 0.120 0.333
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,763,021
Number of Sequences: 539616
Number of extensions: 3107527
Number of successful extensions: 21598
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 629
Number of HSP's that attempted gapping in prelim test: 17041
Number of HSP's gapped (non-prelim): 3932
length of query: 158
length of database: 191,569,459
effective HSP length: 108
effective length of query: 50
effective length of database: 133,290,931
effective search space: 6664546550
effective search space used: 6664546550
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 56 (26.2 bits)