Query 031500
Match_columns 158
No_of_seqs 68 out of 70
Neff 3.2
Searched_HMMs 13730
Date Tue Mar 26 00:15:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031500.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031500hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vpma_ d.38.1.1 (A:) Acyl-CoA 8.0 82 0.006 21.4 1.8 23 32-54 127-152 (155)
2 d1k4ta3 e.15.1.1 (A:201-430) E 7.2 2.4E+02 0.017 21.5 4.4 18 24-41 107-124 (230)
3 d1oisa_ e.15.1.1 (A:) Eukaryot 6.4 2.1E+02 0.015 21.7 3.7 20 24-43 99-118 (223)
4 d2ahme1 d.302.1.1 (E:43-197) N 6.3 1.1E+02 0.008 22.3 1.8 35 37-71 10-46 (155)
5 d1l2pa_ f.23.21.1 (A:) F1F0 AT 5.4 3.3E+02 0.024 16.3 3.8 32 3-34 6-41 (61)
6 d1y7ua1 d.38.1.1 (A:8-171) Acy 4.6 4.4E+02 0.032 17.6 4.3 18 36-53 130-150 (164)
7 d1imla2 g.39.1.3 (A:29-76) Cys 4.5 1.6E+02 0.012 17.5 1.4 12 146-157 34-45 (48)
8 d3b8ma1 d.58.60.1 (A:64-330) E 4.0 6.2E+02 0.045 18.1 5.0 30 37-66 159-188 (267)
9 d1aepa_ a.63.1.1 (A:) Apolipop 3.9 6.2E+02 0.045 17.4 5.4 48 5-58 97-144 (153)
10 d1dpjb_ a.137.7.1 (B:) Protein 3.3 3.3E+02 0.024 14.4 1.9 16 5-20 3-18 (29)
No 1
>d1vpma_ d.38.1.1 (A:) Acyl-CoA hydrolase BH0798 {Bacillus halodurans [TaxId: 86665]}
Probab=8.00 E-value=82 Score=21.43 Aligned_cols=23 Identities=26% Similarity=0.442 Sum_probs=12.2
Q ss_pred hhccCChhHHH---HHHHHHHHHHHH
Q 031500 32 KMKAHDPVEKE---MATEKKEERRMQ 54 (158)
Q Consensus 32 KatAr~~~eKe---~A~erk~ak~aq 54 (158)
+....+++|++ .|.+|++.|+.+
T Consensus 127 ~l~p~t~ee~~~~~~a~~r~~~r~~~ 152 (155)
T d1vpma_ 127 QVEPQTEEEKRLYETAPARKENRKKR 152 (155)
T ss_dssp EEECCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 34455677774 455555555443
No 2
>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.16 E-value=2.4e+02 Score=21.47 Aligned_cols=18 Identities=17% Similarity=0.108 Sum_probs=9.6
Q ss_pred HhHhhhhhhhccCChhHH
Q 031500 24 ATAQEKVDKMKAHDPVEK 41 (158)
Q Consensus 24 A~aqEKaEKatAr~~~eK 41 (158)
.-.+.+.|+-.+.+++||
T Consensus 107 ~~~~~~ke~kK~~skeEK 124 (230)
T d1k4ta3 107 QYFKAQTEARKQMSKEEK 124 (230)
T ss_dssp HHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHcCCHHHH
Confidence 344555555555555555
No 3
>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=6.45 E-value=2.1e+02 Score=21.72 Aligned_cols=20 Identities=20% Similarity=0.086 Sum_probs=8.8
Q ss_pred HhHhhhhhhhccCChhHHHH
Q 031500 24 ATAQEKVDKMKAHDPVEKEM 43 (158)
Q Consensus 24 A~aqEKaEKatAr~~~eKe~ 43 (158)
.-.+.+.|+-.+.+++||..
T Consensus 99 ~~~~~~kE~kk~~tkEEKk~ 118 (223)
T d1oisa_ 99 DYFQLQKEQKKQLTSQEKKQ 118 (223)
T ss_dssp HHHHHHHHHHTTC---CHHH
T ss_pred HHHHHHHHHHHhcCHHHHHH
Confidence 33455555555555555543
No 4
>d2ahme1 d.302.1.1 (E:43-197) Nonstructural protein 8, NSP8 {SARS coronavirus [TaxId: 227859]}
Probab=6.27 E-value=1.1e+02 Score=22.32 Aligned_cols=35 Identities=20% Similarity=0.379 Sum_probs=20.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHH--HHHHHhcHHHHH
Q 031500 37 DPVEKEMATEKKEERRMQAELEK--QEAREHNSAAKQ 71 (158)
Q Consensus 37 ~~~eKe~A~erk~ak~aqAe~~k--h~aka~nAA~k~ 71 (158)
+.-|++.|-+||-+|+++.-|-- .++|+.++..|.
T Consensus 10 s~~drd~avqrKLerMAe~Amt~MYKeARa~drksKv 46 (155)
T d2ahme1 10 SEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKV 46 (155)
T ss_dssp SCCSTTTHHHHHHHHHHHHHHHTTCCCSCCHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 44567788888888887765532 234444444443
No 5
>d1l2pa_ f.23.21.1 (A:) F1F0 ATP synthase subunit B, membrane domain {Escherichia coli [TaxId: 562]}
Probab=5.45 E-value=3.3e+02 Score=16.27 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=16.6
Q ss_pred hHHHHHHhHHHhHhhh----hhhhhHhHhhhhhhhc
Q 031500 3 SMKESAANVAASAKAG----MEKTKATAQEKVDKMK 34 (158)
Q Consensus 3 s~KEkaan~aASAKag----~ektKA~aqEKaEKat 34 (158)
.+|..++.+-.-|+.. ++.+|..+++-.++..
T Consensus 6 eAK~eAa~Ii~qA~~ra~qIveeak~~A~~Ea~rI~ 41 (61)
T d1l2pa_ 6 KAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIV 41 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666666544 3344444444444433
No 6
>d1y7ua1 d.38.1.1 (A:8-171) Acyl-coa hydrolase BC2038 {Bacillus cereus [TaxId: 1396]}
Probab=4.61 E-value=4.4e+02 Score=17.56 Aligned_cols=18 Identities=33% Similarity=0.481 Sum_probs=8.0
Q ss_pred CChhHHH---HHHHHHHHHHH
Q 031500 36 HDPVEKE---MATEKKEERRM 53 (158)
Q Consensus 36 r~~~eKe---~A~erk~ak~a 53 (158)
.+++|++ .|.+|++.|..
T Consensus 130 ~t~eE~~~~~~a~~r~~~R~~ 150 (164)
T d1y7ua1 130 DTEEEKESHRIAVLRAEQRHI 150 (164)
T ss_dssp CSHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 3556653 33344444433
No 7
>d1imla2 g.39.1.3 (A:29-76) Cysteine-rich (intestinal) protein, CRP, CRIP {Rat (Rattus rattus) [TaxId: 10117]}
Probab=4.48 E-value=1.6e+02 Score=17.54 Aligned_cols=12 Identities=25% Similarity=0.158 Sum_probs=7.3
Q ss_pred CCCccccCCCCC
Q 031500 146 GGATGYGTGGSY 157 (158)
Q Consensus 146 ~~~~g~~~g~~~ 157 (158)
|-++|+|..++|
T Consensus 34 PkG~g~Gg~gs~ 45 (48)
T d1imla2 34 PKGFGRGGAESH 45 (48)
T ss_dssp CCCSSCCCSSSC
T ss_pred CCccccCCccce
Confidence 566666655554
No 8
>d3b8ma1 d.58.60.1 (A:64-330) Enterochelin transport protein FepE {Escherichia coli [TaxId: 562]}
Probab=4.03 E-value=6.2e+02 Score=18.09 Aligned_cols=30 Identities=3% Similarity=-0.051 Sum_probs=19.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 031500 37 DPVEKEMATEKKEERRMQAELEKQEAREHN 66 (158)
Q Consensus 37 ~~~eKe~A~erk~ak~aqAe~~kh~aka~n 66 (158)
-..+++.|+++++.|+.+.+.-+.-|++.+
T Consensus 159 ~~~~~~~ak~~~~~~i~~l~~Al~IA~~ag 188 (267)
T d3b8ma1 159 LAQDRIKMKNQLDANIQRLNYSLDIANAAG 188 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344566677777777777776666665433
No 9
>d1aepa_ a.63.1.1 (A:) Apolipophorin-III {African locust (Locusta migratoria) [TaxId: 7004]}
Probab=3.87 E-value=6.2e+02 Score=17.42 Aligned_cols=48 Identities=27% Similarity=0.356 Sum_probs=28.5
Q ss_pred HHHHHhHHHhHhhhhhhhhHhHhhhhhhhccCChhHHHHHHHHHHHHHHHHHHH
Q 031500 5 KESAANVAASAKAGMEKTKATAQEKVDKMKAHDPVEKEMATEKKEERRMQAELE 58 (158)
Q Consensus 5 KEkaan~aASAKag~ektKA~aqEKaEKatAr~~~eKe~A~erk~ak~aqAe~~ 58 (158)
.....|++--=..-..|++|++|| +-.|.+-.+-+...+-|++.|.++
T Consensus 97 qsaltnvghqwqdiatktqasaqe------awapvqsalqeaaektkeaaanlq 144 (153)
T d1aepa_ 97 QSALTNVGHQWQDIATKTQASAQE------AWAPVQSALQEAAEKTKEAAANLQ 144 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTC------TTGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhHHHHHHHHhHhhHHH------HHhhHHHHHHHHHHHHHHHHHHHH
Confidence 334455555444445667777776 455777666666666666666554
No 10
>d1dpjb_ a.137.7.1 (B:) Proteinase A inhibitor IA3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=3.26 E-value=3.3e+02 Score=14.41 Aligned_cols=16 Identities=13% Similarity=0.333 Sum_probs=11.3
Q ss_pred HHHHHhHHHhHhhhhh
Q 031500 5 KESAANVAASAKAGME 20 (158)
Q Consensus 5 KEkaan~aASAKag~e 20 (158)
..|++.+-.|.|+++.
T Consensus 3 qqkvseifqsskeklq 18 (29)
T d1dpjb_ 3 QQKVSEIFQSSKEKLQ 18 (29)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHhc
Confidence 4677888778777653
Done!