Your job contains 1 sequence.
>031501
MEQIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCD
RSLLDSFRFCSLGCKIVGTSKNFQKRKNRLAMGSDSEDSYSSSIHGKLKNRDFSSNNNNK
MQSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031501
(158 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035614 - symbol:AT1G32700 species:3702 "Arabi... 512 4.1e-49 1
TAIR|locus:2141070 - symbol:AT4G17900 species:3702 "Arabi... 476 2.7e-45 1
TAIR|locus:2011721 - symbol:AT1G76590 species:3702 "Arabi... 340 3.2e-39 2
TAIR|locus:2037405 - symbol:AT1G21000 species:3702 "Arabi... 332 4.0e-39 2
TAIR|locus:2178580 - symbol:AT5G46710 species:3702 "Arabi... 376 1.1e-34 1
TAIR|locus:2009879 - symbol:AT1G43000 species:3702 "Arabi... 310 1.0e-27 1
TAIR|locus:2057867 - symbol:AT2G27930 species:3702 "Arabi... 291 1.1e-25 1
TAIR|locus:1009023224 - symbol:AT2G12646 "AT2G12646" spec... 230 4.3e-23 2
TAIR|locus:2015761 - symbol:AT1G31040 species:3702 "Arabi... 212 6.0e-22 2
TAIR|locus:2101881 - symbol:AT3G60670 species:3702 "Arabi... 201 1.3e-18 2
TAIR|locus:4010713610 - symbol:AT2G01818 species:3702 "Ar... 150 4.2e-13 2
TAIR|locus:5019474785 - symbol:AT3G50808 species:3702 "Ar... 93 9.2e-09 2
>TAIR|locus:2035614 [details] [associations]
symbol:AT1G32700 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] EMBL:CP002684 UniGene:At.16977
InterPro:IPR006734 Pfam:PF04640 IPI:IPI00533975 RefSeq:NP_564406.1
EnsemblPlants:AT1G32700.1 GeneID:840164 KEGG:ath:AT1G32700
OMA:TRGGAMG Uniprot:F4IEB6
Length = 213
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 107/157 (68%), Positives = 119/157 (75%)
Query: 3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
QIRRSSYHDVIRVSEIQK LDI+GVQTYVINSA+VVFLNERPQPRPGKGV NTCEVC RS
Sbjct: 65 QIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYRS 124
Query: 63 LLDSFRFCSLGCKIVGTSKNFQKR-KNRLAMGXXXXXXXXXXIHGKLKNRDFSSNNNNKM 121
L+DSFRFCSLGCKI G SK +K N L+ G+LK D NN
Sbjct: 125 LVDSFRFCSLGCKISGISKKKRKEWTNNLSDSDDSYSSTSI---GRLKKNDDIMNN---- 177
Query: 122 QSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGLLIEF 158
SF+PSTPP +AV+ RI+KRRKGIPHRAP GGL+IE+
Sbjct: 178 -SFTPSTPPLSAVNRRIAKRRKGIPHRAPFGGLIIEY 213
>TAIR|locus:2141070 [details] [associations]
symbol:AT4G17900 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687
GenomeReviews:CT486007_GR InterPro:IPR006734 Pfam:PF04640
HOGENOM:HOG000235045 EMBL:BT029385 EMBL:AK227244 IPI:IPI00529939
RefSeq:NP_193524.2 UniGene:At.2047 STRING:Q0WUB8
EnsemblPlants:AT4G17900.1 GeneID:827514 KEGG:ath:AT4G17900
TAIR:At4g17900 InParanoid:Q0WUB8 OMA:NRWPPWL PhylomeDB:Q0WUB8
ProtClustDB:CLSN2918589 Genevestigator:Q0WUB8 Uniprot:Q0WUB8
Length = 227
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 101/152 (66%), Positives = 112/152 (73%)
Query: 3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
QIRRSSYHDVIRV+EIQK LDI G+QTYVINSA+VVFLNERPQPRPGKGVTNTC+VC RS
Sbjct: 87 QIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTCKVCYRS 146
Query: 63 LLD-SFRFCSLGCKIVGTSKNFQKRKNRLAMGXXXXXXXXXXIHGKLKNRDFSSNNNNKM 121
L+D SFRFCSLGCKI GTS+ F+K + L M GK N +
Sbjct: 147 LVDDSFRFCSLGCKIAGTSRGFEKGRENLLMETEDSSSSIAI--GK---------NITNL 195
Query: 122 QSFSPSTPPPTAVSH-RISKRRKGIPHRAPMG 152
QSFSPSTPP T S+ RI KRRKGIPHR+PMG
Sbjct: 196 QSFSPSTPPLTTSSNCRIVKRRKGIPHRSPMG 227
>TAIR|locus:2011721 [details] [associations]
symbol:AT1G76590 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0010286 "heat acclimation"
evidence=RCA] EMBL:CP002684 InterPro:IPR006734 Pfam:PF04640
HOGENOM:HOG000235045 EMBL:BT024468 IPI:IPI00518526
RefSeq:NP_565135.1 UniGene:At.19392 ProteinModelPortal:Q2HIW3
PRIDE:Q2HIW3 EnsemblPlants:AT1G76590.1 GeneID:843992
KEGG:ath:AT1G76590 TAIR:At1g76590 InParanoid:Q2HIW3 OMA:YEGEWES
PhylomeDB:Q2HIW3 ProtClustDB:CLSN2687886 Genevestigator:Q2HIW3
Uniprot:Q2HIW3
Length = 245
Score = 340 (124.7 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 63/80 (78%), Positives = 73/80 (91%)
Query: 3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
QIRRSSYH+V+RV+EIQK +DIS VQTY+INSAR+VFLNERPQPR GKGVTNTCE+C RS
Sbjct: 71 QIRRSSYHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPRIGKGVTNTCEICCRS 130
Query: 63 LLDSFRFCSLGCKIVGTSKN 82
LLDSFRFCSLGCK+ G ++
Sbjct: 131 LLDSFRFCSLGCKLGGMKRD 150
Score = 95 (38.5 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 24/63 (38%), Positives = 31/63 (49%)
Query: 88 NRLAMGXXXXXXXXXXIHGKLKNRDFSSNNNNKMQSFSPSTPPPTAVSHRISKRRKGIPH 147
NRL G + G ++ SS+ + SP TPP +HR S RRKG+PH
Sbjct: 187 NRLMSGLSISTVKCDYLSG---DQPSSSSGDESGFKLSPGTPP--IYNHRNSSRRKGVPH 241
Query: 148 RAP 150
RAP
Sbjct: 242 RAP 244
>TAIR|locus:2037405 [details] [associations]
symbol:AT1G21000 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 InterPro:IPR006734
Pfam:PF04640 ProtClustDB:CLSN2687886 EMBL:AF375404 EMBL:AF428392
EMBL:AY129471 IPI:IPI00528836 RefSeq:NP_564128.1 UniGene:At.21086
IntAct:Q93V70 STRING:Q93V70 PRIDE:Q93V70 EnsemblPlants:AT1G21000.1
GeneID:838694 KEGG:ath:AT1G21000 TAIR:At1g21000 InParanoid:Q93V70
OMA:KNECNLF PhylomeDB:Q93V70 Genevestigator:Q93V70 Uniprot:Q93V70
Length = 246
Score = 332 (121.9 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 61/76 (80%), Positives = 71/76 (93%)
Query: 3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
QIRRSSYH+V+RV+EIQK +DI+ VQTY+INSA++VFLNERPQPR GKGVTNTCE+C RS
Sbjct: 69 QIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRS 128
Query: 63 LLDSFRFCSLGCKIVG 78
LLDSFRFCSLGCK+ G
Sbjct: 129 LLDSFRFCSLGCKLGG 144
Score = 102 (41.0 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 26/63 (41%), Positives = 33/63 (52%)
Query: 88 NRLAMGXXXXXXXXXXIHGKLKNRDFSSNNNNKMQSFSPSTPPPTAVSHRISKRRKGIPH 147
NRL G +G ++ SS+ + SFSP TPP +HR S RRKG+PH
Sbjct: 186 NRLMSGLSISTVRFDD-YGPNGDQRSSSSGDEGGFSFSPGTPP--IYNHRNSSRRKGVPH 242
Query: 148 RAP 150
RAP
Sbjct: 243 RAP 245
>TAIR|locus:2178580 [details] [associations]
symbol:AT5G46710 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB016882 UniGene:At.29934
UniGene:At.49135 InterPro:IPR006734 Pfam:PF04640
HOGENOM:HOG000235045 EMBL:AY088190 EMBL:BT025786 IPI:IPI00523597
RefSeq:NP_199483.1 EnsemblPlants:AT5G46710.1 GeneID:834714
KEGG:ath:AT5G46710 TAIR:At5g46710 eggNOG:NOG304257
InParanoid:Q9FIQ4 OMA:TIQIRIS PhylomeDB:Q9FIQ4
ProtClustDB:CLSN2916248 Genevestigator:Q9FIQ4 Uniprot:Q9FIQ4
Length = 226
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 80/151 (52%), Positives = 97/151 (64%)
Query: 3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
QIR SSYH+V +V EIQK LDIS +QTYVINS++V+FLNERPQ +PGKG TN C VC R
Sbjct: 81 QIRISSYHNVTKVDEIQKYLDISSIQTYVINSSKVLFLNERPQSKPGKGFTNACMVCYRG 140
Query: 63 LLDS-FRFCSLGCKIVGTSKNFQKRKNRLAMGXXXXXXXXXXIHGKLKNRDFSSNNNNKM 121
L ++ FRFCS+GCK+ GTS FQKR G N + N N+ +
Sbjct: 141 LAENCFRFCSIGCKVAGTSGVFQKRVKHTTNDSDNSNNSS----GVENNSSGAENGNSNL 196
Query: 122 QSFSPSTP--PPTAVSHRISKRRKGIPHRAP 150
QS SP TP PP ++ R+ RKGIPHRAP
Sbjct: 197 QSLSPPTPQFPPRSLRKRL---RKGIPHRAP 224
>TAIR|locus:2009879 [details] [associations]
symbol:AT1G43000 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC068324 InterPro:IPR006734
Pfam:PF04640 HOGENOM:HOG000235045 IPI:IPI00521516
RefSeq:NP_174999.1 UniGene:At.52004 EnsemblPlants:AT1G43000.1
GeneID:840898 KEGG:ath:AT1G43000 TAIR:At1g43000 eggNOG:NOG274018
InParanoid:Q9C7R9 OMA:HIDISCI PhylomeDB:Q9C7R9
ProtClustDB:CLSN2914610 Genevestigator:Q9C7R9 Uniprot:Q9C7R9
Length = 216
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 69/154 (44%), Positives = 91/154 (59%)
Query: 3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
QIRRSSYH+V+RVSEIQK +DIS +QTYVINSA++ FLN RPQ R GK + TC++C R+
Sbjct: 62 QIRRSSYHNVVRVSEIQKHIDISCIQTYVINSAKIFFLNARPQCRTGKSLNKTCQICSRN 121
Query: 63 LLDSFRFCSLGCKIVGTSKNFQKRKNRLAMGXXXXXXXX--XXIHGKLKNRDFSSNNNNK 120
LLDSF FCSL CK+ G G I +L + + ++ +
Sbjct: 122 LLDSFLFCSLACKLEGVKNGEDPNLTLFHSGKSDDSSKIINTGICSRLIDGISIAVDDQR 181
Query: 121 MQSFSPSTPP-PTAVSHR---ISKRRKGIPHRAP 150
++ +P P+ SHR + RRKGIP RAP
Sbjct: 182 SETAGVLSPETPSIESHRNYPMKSRRKGIPQRAP 215
>TAIR|locus:2057867 [details] [associations]
symbol:AT2G27930 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002685 InterPro:IPR006734
Pfam:PF04640 IPI:IPI00517385 RefSeq:NP_180360.4 UniGene:At.52944
EnsemblPlants:AT2G27930.1 GeneID:817337 KEGG:ath:AT2G27930
OMA:DISEVQT Uniprot:F4IHN4
Length = 189
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 60/97 (61%), Positives = 71/97 (73%)
Query: 3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGK-GVTNT------ 55
QIRRSSYHDV+RVSEI+ LDI GVQTYVINSARV+FLNERPQP+ G ++
Sbjct: 58 QIRRSSYHDVVRVSEIENALDIRGVQTYVINSARVLFLNERPQPKNSSHGAASSTPKTMS 117
Query: 56 --CEVCDRSLLDSFRFCSLGCKIVGTSKNFQKRKNRL 90
CE C R+LLD FRFCSLGCK+ G KN ++ + RL
Sbjct: 118 YFCETCCRTLLDPFRFCSLGCKVEGMRKNKEEEEERL 154
>TAIR|locus:1009023224 [details] [associations]
symbol:AT2G12646 "AT2G12646" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR
InterPro:IPR006734 Pfam:PF04640 EMBL:DQ487530 IPI:IPI00657404
RefSeq:NP_001031352.1 UniGene:At.47712 EnsemblPlants:AT2G12646.1
GeneID:3768403 KEGG:ath:AT2G12646 TAIR:At2g12646 OMA:KRPQNRQ
PhylomeDB:Q1G3Q4 Genevestigator:Q2V486 Uniprot:Q1G3Q4
Length = 256
Score = 230 (86.0 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 42/82 (51%), Positives = 57/82 (69%)
Query: 3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
Q+RR YHDV+R+ ++QK++D S VQ Y INSA+VVF+ +RPQ R KG N C CDRS
Sbjct: 58 QVRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRS 117
Query: 63 LLDSFRFCSLGCKIVGTSKNFQ 84
L + + CSLGCK+ K ++
Sbjct: 118 LQEPYIHCSLGCKVDFVMKRYR 139
Score = 51 (23.0 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 123 SFSPSTPPPTAVSHRISKRRKGIPHRAPM 151
S+ + P +S I+ RRKG+P R+P+
Sbjct: 228 SYKEVSEDPDDISACIN-RRKGVPQRSPL 255
>TAIR|locus:2015761 [details] [associations]
symbol:AT1G31040 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 InterPro:IPR006734
Pfam:PF04640 IPI:IPI00525624 RefSeq:NP_174390.2 UniGene:At.71353
EnsemblPlants:AT1G31040.1 GeneID:839990 KEGG:ath:AT1G31040
OMA:NVCFTCD ArrayExpress:F4I7U9 Uniprot:F4I7U9
Length = 243
Score = 212 (79.7 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 39/74 (52%), Positives = 53/74 (71%)
Query: 3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
Q+RR YHDV+R+S+++K++D S VQ Y IN A+V+FLN+R Q R K +N C CDR
Sbjct: 71 QVRRYVYHDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSR-AKVSSNVCFTCDRI 129
Query: 63 LLDSFRFCSLGCKI 76
L + F FCSL CK+
Sbjct: 130 LQEPFHFCSLSCKV 143
Score = 58 (25.5 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 115 SNNNNKMQSFSPSTPP-----PTAVSHRISKRRKGIPHRAP 150
+N++ K + S P P V + RRKG PHRAP
Sbjct: 201 NNSHKKEKKKSKKKKPESNYLPGMVLSSLGNRRKGAPHRAP 241
>TAIR|locus:2101881 [details] [associations]
symbol:AT3G60670 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=ISS] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL162295
InterPro:IPR006734 Pfam:PF04640 HOGENOM:HOG000235045 EMBL:BT020234
EMBL:BT020501 IPI:IPI00540103 PIR:T47878 RefSeq:NP_191626.1
UniGene:At.50297 EnsemblPlants:AT3G60670.1 GeneID:825238
KEGG:ath:AT3G60670 TAIR:At3g60670 eggNOG:NOG265013
InParanoid:Q9LZZ6 OMA:FINERPQ PhylomeDB:Q9LZZ6
ProtClustDB:CLSN2685070 Genevestigator:Q9LZZ6 Uniprot:Q9LZZ6
Length = 245
Score = 201 (75.8 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 39/74 (52%), Positives = 49/74 (66%)
Query: 3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQPRPGKGVTNTCEVCDRS 62
QIRR Y DV+RV + K++D S +Q Y NS++VVF+NERPQ R +G N C CDRS
Sbjct: 59 QIRRYVYRDVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRGSGNICITCDRS 118
Query: 63 LLDSFRFCSLGCKI 76
L + FC L CKI
Sbjct: 119 LQSPYLFCCLSCKI 132
Score = 37 (18.1 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 141 RRKGIPHRAPM 151
RRK P RAP+
Sbjct: 234 RRKNPPQRAPL 244
>TAIR|locus:4010713610 [details] [associations]
symbol:AT2G01818 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000315
PROSITE:PS50119 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0008270 GO:GO:0005622 EMBL:AC007069 InterPro:IPR006734
Pfam:PF04640 IPI:IPI00846199 RefSeq:NP_001077867.1 UniGene:At.47695
EnsemblPlants:AT2G01818.1 GeneID:5007863 KEGG:ath:AT2G01818
TAIR:At2g01818 eggNOG:NOG247501 HOGENOM:HOG000235045 OMA:CSISCKI
PhylomeDB:A8MQN6 ProtClustDB:CLSN2699066 Genevestigator:A8MQN6
Uniprot:A8MQN6
Length = 222
Score = 150 (57.9 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 37/85 (43%), Positives = 45/85 (52%)
Query: 3 QIRRSSYHDVIRVSEIQKVLDISGVQTYVINSARVVFLNERPQP---RPGKGVTN--TCE 57
QI + Y DVIR+ EIQ D S +QTY IN + + LN RPQ RP N +C
Sbjct: 67 QICKYVYQDVIRLLEIQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGASCV 126
Query: 58 VCDRSLLDSFR-FCSLGCKIVGTSK 81
C R + D FCS+ CKI SK
Sbjct: 127 TCKRYIQDHPNLFCSISCKISTPSK 151
Score = 35 (17.4 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 137 RISKRRKGIPHRAP 150
RI KR KGI R+P
Sbjct: 208 RILKR-KGISRRSP 220
>TAIR|locus:5019474785 [details] [associations]
symbol:AT3G50808 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL049862 PIR:T08402 IPI:IPI00938816
RefSeq:NP_001154670.1 UniGene:At.74656 EnsemblPlants:AT3G50808.1
GeneID:7922401 KEGG:ath:AT3G50808 TAIR:At3g50808 PhylomeDB:P0CB19
Genevestigator:P0CB19 InterPro:IPR006734 Pfam:PF04640
Uniprot:P0CB19
Length = 110
Score = 93 (37.8 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 18 IQKVLDISGVQTYVINSARVVFLNERP---QPRPGKGVTNTCEVCDRSL--LDSFRFCSL 72
+ + +DISG+ Y IN +V++N+R R V + C++C+ + S FCS+
Sbjct: 1 MSQYMDISGIHLYSINGFPIVYINQRRGNNNHRSRSNVMHKCKICEWEIDAASSALFCSM 60
Query: 73 GCK 75
CK
Sbjct: 61 ECK 63
Score = 50 (22.7 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 9/10 (90%), Positives = 9/10 (90%)
Query: 141 RRKGIPHRAP 150
RRKG PHRAP
Sbjct: 99 RRKGSPHRAP 108
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 158 148 0.00068 104 3 11 22 0.44 31
30 0.39 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 554 (59 KB)
Total size of DFA: 129 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.67u 0.15s 16.82t Elapsed: 00:00:01
Total cpu time: 16.67u 0.15s 16.82t Elapsed: 00:00:01
Start: Sat May 11 04:28:04 2013 End: Sat May 11 04:28:05 2013