BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031503
(158 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O32472|PHAJ_AERPU (R)-specific enoyl-CoA hydratase OS=Aeromonas punctata GN=phaJ PE=1
SV=1
Length = 134
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 76/131 (58%), Gaps = 4/131 (3%)
Query: 25 LKTGDILRQTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQI 84
L+ G R ++ F + +V ++ +S D NPLH + A F+ +VHGML+AS+F +
Sbjct: 6 LEVGQKARLSKRFGAAEVAAFAALSEDFNPLHLDPAFAATTAFERPIVHGMLLASLFSGL 65
Query: 85 ISSHFP--GAVYVSQSLHFRLPVYIGDEVLGQLQAVNVREMKKRYLVKFSTKCIKNGELL 142
+ P G++Y+ QSL F+LPV++GDEV +++ +RE K + +T+ G L
Sbjct: 66 LGQQLPGKGSIYLGQSLSFKLPVFVGDEVTAEVEVTALREDKP--IATLTTRIFTQGGAL 123
Query: 143 VLDGEAMAFLP 153
+ GEA+ LP
Sbjct: 124 AVTGEAVVKLP 134
>sp|P86397|HTD2_HUMAN Hydroxyacyl-thioester dehydratase type 2, mitochondrial OS=Homo
sapiens GN=RPP14 PE=1 SV=1
Length = 168
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 10/143 (6%)
Query: 14 LRYFSSLEPRILKTGDILRQTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVH 73
L++F + +K GD R F+ DV +S+++ D NPLH N + A++ F + +VH
Sbjct: 28 LQHFQHMH---IKVGDRAELRRAFTQTDVATFSELTGDVNPLHLNEDFAKHTKFGNTIVH 84
Query: 74 GMLVASMFPQIISSHF--PGAVYVSQSLHFRLPVYIGDEVLGQLQAVNVREMKKRYLVKF 131
G+L+ + ++ + PG V++SQ + F P+YIG+ VL + V+++ KR++
Sbjct: 85 GVLINGLISALLGTKMPGPGCVFLSQEISFPAPLYIGEVVLA---SAEVKKL-KRFIAII 140
Query: 132 STKC-IKNGELLVLDGEAMAFLP 153
+ C + + V++G +P
Sbjct: 141 AVSCSVIESKKTVMEGWVKVMVP 163
>sp|P77455|PAAZ_ECOLI Bifunctional protein PaaZ OS=Escherichia coli (strain K12) GN=paaZ
PE=1 SV=1
Length = 681
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 12 PLLRYFSSLEPRILKTGD-ILRQTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDR 70
P +YF L+P GD +L R + D+V ++ +S D H + +A + F +R
Sbjct: 526 PFRKYFEELQP-----GDSLLTPRRTMTEADIVNFACLSGDHFYAHMDKIAAAESIFGER 580
Query: 71 LVHGMLVASMFPQIISSHFPGAV---YVSQSLHFRLPVYIGDEV 111
+VHG V S + G V Y +SL F PV GD +
Sbjct: 581 VVHGYFVLSAAAGLFVDAGVGPVIANYGLESLRFIEPVKPGDTI 624
>sp|O67879|MTNA_AQUAE Methylthioribose-1-phosphate isomerase OS=Aquifex aeolicus (strain
VF5) GN=mtnA PE=3 SV=1
Length = 456
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 68 DDRLVHGMLV--ASMFPQIISSHFPGAVYVSQSLHFRLPVYIGDEVLGQLQAVNVREMKK 125
D LVHG + A+ + +++ + P V ++ F PV +GDE++ + + + KK
Sbjct: 39 DKGLVHGGFIFSAADYASMLAVNHPNVVLAGANVKFLKPVKVGDEIICKARVSEDKGKKK 98
Query: 126 RYLVKFSTKCIKNGELLVLDGE 147
+ LV +C K GE V +GE
Sbjct: 99 KVLV----ECFK-GEDKVFEGE 115
>sp|Q9VXJ0|DHB4_DROME Peroxisomal multifunctional enzyme type 2 OS=Drosophila
melanogaster GN=Mfe2 PE=1 SV=1
Length = 598
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 38 SSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHFPG---AVY 94
+SED ++S D NPLH + + A AGF ++HG+ + + + F A++
Sbjct: 483 TSEDQAALYRLSGDKNPLHIDPQMALLAGFKTPILHGLCTLGFSVRAVLAQFADNNPALF 542
Query: 95 VSQSLHFRLPVYIGDEVLGQLQAVNVREMKKRYLVKFSTKCIKNGELLV 143
+ + F PV G Q + V K+ + F T ++ G+ ++
Sbjct: 543 KAVKVRFSGPVIPG-------QTLRVDLWKQGTRINFRTVVVETGKEVI 584
>sp|P97852|DHB4_RAT Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus
GN=Hsd17b4 PE=1 SV=3
Length = 735
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 47 KVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHFPG---AVYVSQSLHFRL 103
++S DSNPLH + A AGF+ ++HG+ + + F + + + + F
Sbjct: 505 RLSGDSNPLHIDPSFASIAGFEKPILHGLCTFGFSARHVLQQFADNDVSRFKAIKVRFAK 564
Query: 104 PVYIGDEVLGQLQAVNVREMKKRYLVKFSTKCIKNGELLV 143
PVY G Q + K+ + F TK + G++++
Sbjct: 565 PVYPG-------QTLQTEMWKEGNRIHFQTKVQETGDIVI 597
>sp|P51659|DHB4_HUMAN Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens
GN=HSD17B4 PE=1 SV=3
Length = 736
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Query: 47 KVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHFPG---AVYVSQSLHFRL 103
++S D NPLH + A AGFD ++HG+ + + F + + + F
Sbjct: 506 RLSGDWNPLHIDPNFASLAGFDKPILHGLCTFGFSARRVLQQFADNDVSRFKAIKARFAK 565
Query: 104 PVYIGDEVLGQLQAVNVREMKKRYLVKFSTKCIKNGELLV 143
PVY G Q + K+ + F TK + G++++
Sbjct: 566 PVYPG-------QTLQTEMWKEGNRIHFQTKVQETGDIVI 598
>sp|P49251|MAOC_ENTAE Protein MaoC OS=Enterobacter aerogenes GN=maoC PE=3 SV=2
Length = 335
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 30/130 (23%)
Query: 12 PLLRYFSSLEPRILKTGD-ILRQTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDR 70
P +YF ++P GD +L R + D+V ++ +S D H + +A + F +R
Sbjct: 193 PFRKYFEEIQP-----GDSLLTPRRTLTEADIVNFACLSGDHFYAHMDKIAAAESIFGER 247
Query: 71 LVHGMLV----------ASMFPQIISSHFPGAVYVSQSLHFRLPVYIGDEVLGQLQAVNV 120
+VHG + A + P I A Y ++L F PV GD + V
Sbjct: 248 VVHGYFLISAAAGLFVDAGVRPVI-------ANYGMENLRFIEPVKPGD-------TIQV 293
Query: 121 REMKKRYLVK 130
R KR VK
Sbjct: 294 RLTCKRKTVK 303
>sp|P22414|FOX2_CANTR Peroxisomal hydratase-dehydrogenase-epimerase OS=Candida tropicalis
PE=1 SV=2
Length = 906
Score = 37.0 bits (84), Expect = 0.056, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 33 QTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVA-----------SMF 81
Q + SED+ ++S D NPLH + A+ A F ++HGM MF
Sbjct: 790 QVDVPVSEDLAALYRLSGDRNPLHIDPNFAKGAKFPKPILHGMCTYGLSAKALIDKFGMF 849
Query: 82 PQIISSHFPGAVYVSQSL 99
+ I + F G V+ ++L
Sbjct: 850 NE-IKARFTGIVFPGETL 866
>sp|P51660|DHB4_MOUSE Peroxisomal multifunctional enzyme type 2 OS=Mus musculus
GN=Hsd17b4 PE=1 SV=3
Length = 735
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 47 KVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHFPG---AVYVSQSLHFRL 103
++S D NPLH + + A AGF+ ++HG+ + + F + + + + F
Sbjct: 505 RLSGDWNPLHIDPDFASVAGFEKPILHGLCTFGFSARHVLQQFADNDVSRFKAIKVRFAK 564
Query: 104 PVYIGDEVLGQLQAVNVREMKKRYLVKFSTKCIKNGELLV 143
PVY G Q + K+ + F TK + G++++
Sbjct: 565 PVYPG-------QTLQTEMWKEGNRIHFQTKVHETGDVVI 597
>sp|P07149|FAS1_YEAST Fatty acid synthase subunit beta OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FAS1 PE=1 SV=2
Length = 2051
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 13/110 (11%)
Query: 45 YSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHFPGAV------YVSQS 98
Y++VS D NP+H + A A + HGM ++ +I + +V Y Q
Sbjct: 1553 YARVSGDLNPIHVSRHFASYANLPGTITHGMFSSASVRALIENWAADSVSSRVRGYTCQF 1612
Query: 99 LHFRLPVYIGDEVLGQLQAVNVREMKKRYLVKFSTKCIKNGELLVLDGEA 148
+ LP + + +N R+ L+KF T+ +++VL GEA
Sbjct: 1613 VDMVLPNTALKTSIQHVGMINGRK-----LIKFETR--NEDDVVVLTGEA 1655
>sp|P34229|FAS1_YARLI Fatty acid synthase subunit beta OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=FAS1 PE=3 SV=2
Length = 2086
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 45 YSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHFPGAVYVSQ----SLH 100
Y+ VS D NP+H + A A + HGM ++ +I + VS+ S
Sbjct: 1584 YAGVSGDYNPIHVSRAFASYASLPGTITHGMYSSAAVRSLIEV-WAAENNVSRVRAFSCQ 1642
Query: 101 FRLPVYIGDEVLGQLQAVNVREMKKRYLVKFSTKCIKNGELLVLDGEAMAFLP 153
F+ V DE++ +L+ V + + R ++K T + E +VL GEA P
Sbjct: 1643 FQGMVLPNDEIVTRLEHVGM--INGRKIIKV-TSTNRETEAVVLSGEAEVEQP 1692
>sp|Q54XZ0|MFEB_DICDI Probable enoyl-CoA hydratase 2 OS=Dictyostelium discoideum GN=mfeB
PE=2 SV=1
Length = 294
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 38 SSED-VVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHF----PGA 92
+SED V Y D NPLH + E ++ GF+ ++HG+ + + + HF P
Sbjct: 176 TSEDQAVIYRLAGGDLNPLHIDPEMSKIGGFEVPILHGLCTYGIASRGVLEHFCDNDPSR 235
Query: 93 VYVSQSLHFRLPVYIGDEVLGQLQAVNVREMKKRYLVKFSTKCIKNGELLVLDGEAM 149
+ S F VY G+ + ++ +N + F +K ++G ++ G A+
Sbjct: 236 LK-SIKTRFTKHVYPGETIETEMWKIN------PTTILFQSKTNRDGSYVLSSGVAI 285
>sp|Q00706|STCK_EMENI Putative sterigmatocystin biosynthesis fatty acid synthase subunit
beta OS=Emericella nidulans (strain FGSC A4 / ATCC 38163
/ CBS 112.46 / NRRL 194 / M139) GN=stcK PE=3 SV=2
Length = 1914
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 22 PRILKTGDILRQTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMF 81
PR TGD + Y+ VS D+NP+H +R AG +VHG+ +++
Sbjct: 1413 PRAGWTGDDAASISFTAPAQSEGYAMVSGDTNPIHVCPLFSRFAGLGQPVVHGLHLSATV 1472
Query: 82 PQII 85
+I+
Sbjct: 1473 RRIL 1476
>sp|Q02207|FOX2_YEAST Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FOX2 PE=1
SV=1
Length = 900
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 33 QTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHFPGA 92
+ I +++D ++S D NPLH + A+ F ++HG+ + + + H+
Sbjct: 785 EAEISTNKDQAALYRLSGDFNPLHIDPTLAKAVKFPTPILHGLCTLGISAKALFEHY--G 842
Query: 93 VYVSQSLHFRLPVYIGDEVLGQLQAVNVREMKKRYLVKFST-KCIKNGELLVLDGEAM 149
Y + F V+ GD + V+ K+ +V F T +N ++VLD A+
Sbjct: 843 PYEELKVRFTNVVFPGD-------TLKVKAWKQGSVVVFQTIDTTRN--VIVLDNAAV 891
>sp|Q8VYI3|ECH2_ARATH Enoyl-CoA hydratase 2, peroxisomal OS=Arabidopsis thaliana GN=ECH2
PE=1 SV=1
Length = 309
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 47 KVSHDSNPLHFNSESARNAGFDDRLVHGMLV 77
++S D NPLH + E A+ AGF ++HG+
Sbjct: 204 RLSGDYNPLHSDPEFAKLAGFPRPILHGLCT 234
>sp|Q73SG5|Y4109_MYCPA UPF0336 protein MAP_4109 OS=Mycobacterium paratuberculosis (strain
ATCC BAA-968 / K-10) GN=MAP_4109 PE=3 SV=1
Length = 167
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Query: 36 IFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHFPG---- 91
+ E + +++ + +P HF+ ++A G D ++ + A++F +++ F
Sbjct: 19 VVGREQLRQFALSVKNRHPAHFSEDAAAELGHD-AIIAPLTFATIFAKLVQLDFFRHVDI 77
Query: 92 ------AVYVSQSLHFRLPVYIGDEVLGQLQAVNVREMKKRYLVKFSTKCIKNGELLVLD 145
V V Q F P+ GD++ ++ V+V E +V C + LVL+
Sbjct: 78 GMETLVIVQVDQRFVFSKPIKAGDKLWARMDIVSVDERFGADIVVTKNICTNDDGELVLE 137
Query: 146 G 146
Sbjct: 138 A 138
>sp|Q6PJP8|DCR1A_HUMAN DNA cross-link repair 1A protein OS=Homo sapiens GN=DCLRE1A PE=1
SV=3
Length = 1040
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 87 SHFPGAVYVSQSLHFRLPVYIGDEVLGQLQAVNVREMKKRYL--VKFSTKCIKNGELLVL 144
+HF Y S HF PVY E+ G L N ++++Y+ + T+CI NG +VL
Sbjct: 731 THFHSDHYAGLSKHFTFPVYCS-EITGNL-LKNKLHVQEQYIHPLPLDTECIVNGVKVVL 788
>sp|Q92215|TOXC_COCCA Putative fatty acid synthase subunit TOXC OS=Cochliobolus carbonum
GN=TOXC PE=3 SV=1
Length = 2080
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 45 YSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQII 85
Y++ S D NP+H + A AG + HGM ++ ++
Sbjct: 1571 YARTSGDLNPIHVSRTFAEYAGLPGLITHGMYCSAAIQDLV 1611
>sp|Q03587|RPOB_THEAC DNA-directed RNA polymerase subunit B OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=rpoB PE=3 SV=1
Length = 1195
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 40 EDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHG 74
+ +V+ +KVS D++P +F + A+ G D R+ +G
Sbjct: 37 QQIVDETKVSDDADPGYFVLDPAKTGGHDIRIYYG 71
>sp|P96807|ECH1_MYCTU Probable enoyl-CoA hydratase 1 OS=Mycobacterium tuberculosis
GN=Rv0130 PE=1 SV=1
Length = 151
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 14 LRYFSSLEPRILKTGDILRQTR--IFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRL 71
+R F S+ G+ + Q+ + E+V ++ + D +H + E A F +
Sbjct: 1 MRTFESVADLAAAAGEKVGQSDWVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTI 60
Query: 72 VHGMLVASMFPQI 84
HG + ++ P++
Sbjct: 61 AHGFMTLALLPRL 73
>sp|Q7U2S5|ECH1_MYCBO Probable enoyl-CoA hydratase 1 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb0135 PE=3 SV=1
Length = 151
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 14 LRYFSSLEPRILKTGDILRQTR--IFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRL 71
+R F S+ G+ + Q+ + E+V ++ + D +H + E A F +
Sbjct: 1 MRTFESVADLAAAAGEKVGQSDWVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTI 60
Query: 72 VHGMLVASMFPQI 84
HG + ++ P++
Sbjct: 61 AHGFMTLALLPRL 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,979,948
Number of Sequences: 539616
Number of extensions: 2001742
Number of successful extensions: 4509
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4490
Number of HSP's gapped (non-prelim): 24
length of query: 158
length of database: 191,569,459
effective HSP length: 108
effective length of query: 50
effective length of database: 133,290,931
effective search space: 6664546550
effective search space used: 6664546550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)