BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031507
MEESVYVNGNHHHSFSSSISQRHVSYSCGSCGYELNLSSCNRNISSIGLKYGKSMKRGII
AFVDIDESRFTQVDELQCIPHFSKNSWGILRHRTKLLCRKCGNPIGIAYTDKTSAYSPKS
NGSDSPSVPGASGRRKYDVRIRALQPSSSEESGIPLFS

High Scoring Gene Products

Symbol, full name Information P value
AT4G08330 protein from Arabidopsis thaliana 1.2e-42
AT2G17705 protein from Arabidopsis thaliana 4.7e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031507
        (158 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2137455 - symbol:AT4G08330 "AT4G08330" species...   451  1.2e-42   1
TAIR|locus:504955974 - symbol:AT2G17705 "AT2G17705" speci...   134  4.7e-09   1


>TAIR|locus:2137455 [details] [associations]
            symbol:AT4G08330 "AT4G08330" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            GO:GO:0005886 GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:AL109819 EMBL:AL161511 EMBL:BT004992 EMBL:AK117649
            IPI:IPI00549080 PIR:T14187 RefSeq:NP_192573.1 UniGene:At.27988
            UniGene:At.71009 ProteinModelPortal:Q9STN5 PaxDb:Q9STN5
            PRIDE:Q9STN5 EnsemblPlants:AT4G08330.1 GeneID:826387
            KEGG:ath:AT4G08330 TAIR:At4g08330 eggNOG:NOG322026
            HOGENOM:HOG000238435 InParanoid:Q9STN5 OMA:RTKLLCR PhylomeDB:Q9STN5
            ProtClustDB:CLSN2916135 Genevestigator:Q9STN5 Uniprot:Q9STN5
        Length = 164

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 88/136 (64%), Positives = 103/136 (75%)

Query:    14 SFSSSISQRHVSYSCGSCGYELNLSSCNRNISSIGLKYGKSMKRGIIAFVDIDESRFTQV 73
             S SSS S RHV+YSCGSCGYELNLSS NR  S+IG KYGKSMK GII+F +IDE RF+QV
Sbjct:    26 SSSSSSSMRHVNYSCGSCGYELNLSSTNRITSTIGSKYGKSMKSGIISFFNIDEGRFSQV 85

Query:    74 DELQCIPHFSKNSWGILRHRTKLLCRKCGNPIGIAYTDKTSAYSPKSNGSDSPSVPGASG 133
             DE QC+PHFS+ SWG+ RHRTKLLCRKC N IG A  +K   Y+  +  SD P+ P    
Sbjct:    86 DEFQCMPHFSRYSWGLFRHRTKLLCRKCNNYIGNASQEKAPEYALVTQNSD-PTSPRIGS 144

Query:   134 RRKYDVRIRALQPSSS 149
               KYD+RIR+LQPSS+
Sbjct:   145 VTKYDIRIRSLQPSSA 160


>TAIR|locus:504955974 [details] [associations]
            symbol:AT2G17705 "AT2G17705" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR002579 GO:GO:0005886 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0033743 Gene3D:2.170.150.20
            EMBL:AY501355 EMBL:AY649283 IPI:IPI00544922 RefSeq:NP_849966.2
            UniGene:At.49344 ProteinModelPortal:Q6RF46 SMR:Q6RF46 PaxDb:Q6RF46
            PRIDE:Q6RF46 DNASU:816279 EnsemblPlants:AT2G17705.1 GeneID:816279
            KEGG:ath:AT2G17705 TAIR:At2g17705 eggNOG:NOG246171
            HOGENOM:HOG000239709 InParanoid:Q6RF46 OMA:WGIQRKR PhylomeDB:Q6RF46
            ProtClustDB:CLSN2681721 Genevestigator:Q6RF46 Uniprot:Q6RF46
        Length = 127

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 40/126 (31%), Positives = 58/126 (46%)

Query:    26 YSCGSCGYELNLSSCNRNISSIGLKYGKSMKRGIIAFVDIDESRFTQVDELQCIPHFSK- 84
             Y+C  CG +LNL   N N       Y ++  +G ++F  +D  +F    E + +P F   
Sbjct:     6 YTCKECGSDLNL---NPNDLFPPDFYFEAGNKGTLSFAAVDAEKFRFEKEDKIMPFFETL 62

Query:    85 NSWGILRHRTKLLCRKCGNPIGIAYTDKTSAYSPKSNGSDSPS--VPGASGRRKYDVRIR 142
             N WGI R RTK+ C  C + IG  Y D              PS  +P A    +Y  + +
Sbjct:    63 NYWGIQRKRTKIKCTSCNHLIGYIYDDGPPLTGGIGQYGFGPSQVIPRAP---RYRFKTK 119

Query:   143 ALQPSS 148
             A+Q SS
Sbjct:   120 AVQVSS 125


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.131   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      158       158   0.00085  106 3  11 22  0.39    32
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  152 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.40u 0.08s 16.48t   Elapsed:  00:00:01
  Total cpu time:  16.40u 0.08s 16.48t   Elapsed:  00:00:01
  Start:  Sat May 11 04:50:03 2013   End:  Sat May 11 04:50:04 2013

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