BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031510
(158 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|388513279|gb|AFK44701.1| unknown [Medicago truncatula]
Length = 203
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 99/143 (69%), Gaps = 15/143 (10%)
Query: 1 MKQSKDPFEAALEESPGDSPDELEIETQPQTGT----AAGSATAAVTGELEDEFDNLESQ 56
MKQSKDPFEAA EESP +SP +E E P T + S+ T E+E +++++
Sbjct: 1 MKQSKDPFEAAFEESPPESP--IETEPDPDASTENPNSTNSSLPQSTLTHEEEHNHIKT- 57
Query: 57 APMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTEDQ 116
P + T++K+KDE D+E+++N+DVEL KFP++ DP KMAKMQAIL+QFTE+Q
Sbjct: 58 --------PNSNNTITKHKDEEDDEEEDNMDVELAKFPTAGDPHKMAKMQAILSQFTEEQ 109
Query: 117 MNRYESFRRSALQKSNMRRVFIA 139
M+RYESFRR+ QK+NM+R+ +
Sbjct: 110 MSRYESFRRAGFQKANMKRLLTS 132
>gi|388491516|gb|AFK33824.1| unknown [Medicago truncatula]
Length = 203
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 99/143 (69%), Gaps = 15/143 (10%)
Query: 1 MKQSKDPFEAALEESPGDSPDELEIETQPQTGT----AAGSATAAVTGELEDEFDNLESQ 56
MKQSKDPFEAA EESP +SP +E E P T + S+ T E+E +++++
Sbjct: 1 MKQSKDPFEAAFEESPPESP--IETEPDPDASTENPNSTNSSLPQSTLAHEEEHNHIKT- 57
Query: 57 APMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTEDQ 116
P + T++K+KDE D+E+++N+DVEL KFP++ DP KMAKMQAIL+QFTE+Q
Sbjct: 58 --------PNSNNTITKHKDEEDDEEEDNMDVELAKFPTAGDPHKMAKMQAILSQFTEEQ 109
Query: 117 MNRYESFRRSALQKSNMRRVFIA 139
M+RYESFRR+ QK+NM+R+ +
Sbjct: 110 MSRYESFRRAGFQKANMKRLLTS 132
>gi|225462089|ref|XP_002277017.1| PREDICTED: transcription initiation factor TFIID subunit 11 [Vitis
vinifera]
gi|296086768|emb|CBI32917.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 101/151 (66%), Gaps = 22/151 (14%)
Query: 1 MKQSKDPFEAALEES-PGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFD-NLESQAP 58
MKQSKDPFE A EES P DSP E EI V G++EDE D N+
Sbjct: 1 MKQSKDPFEVAFEESSPPDSPVE-EI----------------VGGQIEDEDDANVNVHPT 43
Query: 59 MSVSAGPAAKMTM---SKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTED 115
+ SA P++ T+ +K+KDE +EE++EN+DVELGK P+S DP KMAKMQAIL+QFTE+
Sbjct: 44 STPSAAPSSGTTVPPTAKSKDEDEEEEEENMDVELGKLPTSGDPHKMAKMQAILSQFTEE 103
Query: 116 QMNRYESFRRSALQKSNMRRVFIASLNSLNL 146
QM+RYESFRRS QK+NM+++ ++ S +
Sbjct: 104 QMSRYESFRRSGFQKANMKKLLVSITGSQKI 134
>gi|217072422|gb|ACJ84571.1| unknown [Medicago truncatula]
Length = 203
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 98/143 (68%), Gaps = 15/143 (10%)
Query: 1 MKQSKDPFEAALEESPGDSPDELEIETQPQTGT----AAGSATAAVTGELEDEFDNLESQ 56
MKQSKDPFEAA EES +SP +E E P T + S+ T E+E +++++
Sbjct: 1 MKQSKDPFEAAFEESLPESP--IETEPDPDASTENPNSTNSSLPQSTLTHEEEHNHIKT- 57
Query: 57 APMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTEDQ 116
P + T++K+KDE D+E+++N+DVEL KFP++ DP KMAKMQAIL+QFTE+Q
Sbjct: 58 --------PNSNNTITKHKDEEDDEEEDNMDVELAKFPTAGDPHKMAKMQAILSQFTEEQ 109
Query: 117 MNRYESFRRSALQKSNMRRVFIA 139
M+RYESFRR+ QK+NM+R+ +
Sbjct: 110 MSRYESFRRAGFQKANMKRLLTS 132
>gi|388503812|gb|AFK39972.1| unknown [Lotus japonicus]
Length = 205
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 94/149 (63%), Gaps = 6/149 (4%)
Query: 1 MKQSKDPFEAALEESPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDNLESQAPMS 60
MKQSKDPFEAA ESP +SP E+E E + A S+ A + +++ L +
Sbjct: 1 MKQSKDPFEAAFVESPPESPVEIEAEPDGEAQNPASSSGVAQVTQAQEDGKKLSKTGTGT 60
Query: 61 VSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTEDQMNRY 120
+ KNKD+ +EE+++N+DVEL K + DP KMAKMQAIL+QFTE+QM+RY
Sbjct: 61 -----SGGGGGGKNKDDEEEEEEDNMDVELTKLQPTGDPQKMAKMQAILSQFTEEQMSRY 115
Query: 121 ESFRRSALQKSNMRRVFIASLNSLNLVRL 149
ESFRR+ QK+NM+R+ +AS+ + +
Sbjct: 116 ESFRRAGFQKANMKRL-LASITGTQKITI 143
>gi|224072412|ref|XP_002303723.1| predicted protein [Populus trichocarpa]
gi|222841155|gb|EEE78702.1| predicted protein [Populus trichocarpa]
Length = 186
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 86/154 (55%), Gaps = 35/154 (22%)
Query: 1 MKQSKDPFEAAL---EESPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDNLESQA 57
MK SKDPFEAA EESP +SP +D++D S A
Sbjct: 1 MKHSKDPFEAAYVEQEESPPESPI------------------------AQDDYDTQTSNA 36
Query: 58 PMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTEDQM 117
AG K KNK + +EE D N+DVEL K S++DP KMA MQAIL QFTE+QM
Sbjct: 37 ----YAGLCKK---GKNKQDEEEEQD-NMDVELWKLASTADPDKMANMQAILAQFTEEQM 88
Query: 118 NRYESFRRSALQKSNMRRVFIASLNSLNLVRLFM 151
+RYESFRRSALQK+NM+R + + ++F+
Sbjct: 89 SRYESFRRSALQKTNMKRKIYLPIVVCGIAKMFV 122
>gi|255583916|ref|XP_002532706.1| Transcription initiation factor TFIID subunit, putative [Ricinus
communis]
gi|223527552|gb|EEF29673.1| Transcription initiation factor TFIID subunit, putative [Ricinus
communis]
Length = 205
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 100/152 (65%), Gaps = 26/152 (17%)
Query: 1 MKQSKDPFEAALEE---SPGDSP---DELEIETQPQTGTAAGSATAAVTGELEDEFDNLE 54
MKQSKDPFEAA EE +P +SP DEL +++Q T A AAV E +D
Sbjct: 10 MKQSKDPFEAAYEEQEETPPESPLGADEL-LDSQ-TAATTAQDPDAAVLQEDDD------ 61
Query: 55 SQAPMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTE 114
+ S G +++E+DEE++ENVDVEL KFPS++DP KMAKMQAIL+QFTE
Sbjct: 62 ----IGSSGG--------GSREEFDEEEEENVDVELAKFPSTADPDKMAKMQAILSQFTE 109
Query: 115 DQMNRYESFRRSALQKSNMRRVFIASLNSLNL 146
+QM RYESFRRSALQK+NMRR+ ++ S +
Sbjct: 110 NQMTRYESFRRSALQKANMRRLLVSITGSQKI 141
>gi|224057892|ref|XP_002299376.1| predicted protein [Populus trichocarpa]
gi|222846634|gb|EEE84181.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 95/163 (58%), Gaps = 22/163 (13%)
Query: 1 MKQSKDPFEAAL---EESPGDSP---DELEIETQPQTGTAAGSATAAVTGE--------- 45
MKQSKDPFEAA EESP +SP D+ + + A S A V +
Sbjct: 1 MKQSKDPFEAAYVEQEESPPESPVAQDDYDTQASNAAAAADDSQGAVVGQDDDDLGGGGR 60
Query: 46 --LEDEFDNLESQAPMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMA 103
D+ + PM SA AK NKD+ +EE+++N+DVEL K S++DP KMA
Sbjct: 61 NDFAHSSDHPSASRPMLGSARSKAK-----NKDDDEEEEEDNMDVELSKLASTADPDKMA 115
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNL 146
KMQ IL QFTE QM+RYESFRRSALQK+NM+R+ ++ S +
Sbjct: 116 KMQTILAQFTEGQMSRYESFRRSALQKTNMKRLLVSITGSQKI 158
>gi|351734450|ref|NP_001236012.1| uncharacterized protein LOC100305481 [Glycine max]
gi|255625637|gb|ACU13163.1| unknown [Glycine max]
Length = 155
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 79/155 (50%), Gaps = 56/155 (36%)
Query: 1 MKQSKDPFEAALEESPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDNLESQAPMS 60
MKQSKDPFEAA EESP P++ TA
Sbjct: 1 MKQSKDPFEAAFEESP------------PESPTAT------------------------- 23
Query: 61 VSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTEDQMNRY 120
E +EED N+DVEL K PS+ DP KMAKMQAIL+QFTE+QM+RY
Sbjct: 24 ----------------ETEEED--NMDVELAKLPSTGDPHKMAKMQAILSQFTEEQMSRY 65
Query: 121 ESFRRSALQKSNMRRVFIASLNSLNLVRLFMFSVT 155
ESFRR+ QK+NM+R+ +AS+ + + M V
Sbjct: 66 ESFRRAGFQKANMKRL-LASITGTQKISVPMTIVV 99
>gi|297804116|ref|XP_002869942.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315778|gb|EFH46201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 75/100 (75%), Gaps = 2/100 (2%)
Query: 47 EDEFDNLESQAPMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQ 106
EDE ++ + PM A + +T +KNKDE DEE++EN++VEL K+P+SSDPAKMAKMQ
Sbjct: 50 EDE-RPVDVRRPMK-KAKTSVVVTEAKNKDEDDEEEEENMEVELTKYPTSSDPAKMAKMQ 107
Query: 107 AILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNL 146
IL+QFTEDQM+RYESFRRSALQ+ M+++ I S +
Sbjct: 108 TILSQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKI 147
>gi|449460461|ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207528 [Cucumis sativus]
gi|449494264|ref|XP_004159496.1| PREDICTED: uncharacterized protein LOC101229675 [Cucumis sativus]
Length = 220
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 109/172 (63%), Gaps = 25/172 (14%)
Query: 1 MKQSKDPFEAALEE---SPGDSP---DELEIETQPQTGTAAGSATAAVTGELEDEFDNLE 54
MKQSKDPFEAA EE SP +SP D+LEI T T A S A +L+D D+ +
Sbjct: 1 MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPT-----TVAPSPADAF--DLQDGDDDPK 53
Query: 55 SQAPMSVSAGPAAKMTM-----------SKNKDEYDEEDDENVDVELGKFPSSSDPAKMA 103
S + + S PA+ +M K K++ +EE++ENV+VEL KFPSS DP KMA
Sbjct: 54 SASVATHSVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMA 113
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNLVRLFMFSVT 155
KMQAIL+QFTE+QM+RYESFRR+ QK+NM+R +AS++ + + M V
Sbjct: 114 KMQAILSQFTEEQMSRYESFRRAGFQKANMKR-LLASISGTQKISVPMTIVV 164
>gi|2982445|emb|CAA18253.1| putative protein [Arabidopsis thaliana]
gi|7268823|emb|CAB79028.1| putative protein [Arabidopsis thaliana]
Length = 221
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 50/58 (86%)
Query: 86 VDVELGKFPSSSDPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNS 143
+DVEL K+P+SSDPAKMAKMQ+IL+QFTEDQM+RYESFRRSALQ+ M++V I S
Sbjct: 86 MDVELTKYPTSSDPAKMAKMQSILSQFTEDQMSRYESFRRSALQRPQMKKVLIGVTGS 143
>gi|15235369|ref|NP_193761.1| transcription initiation factor TFIID subunit D9 [Arabidopsis
thaliana]
gi|7638155|gb|AAF65405.1|AF238326_1 putative TATA binding protein associated factor 24kDa subunit
[Arabidopsis thaliana]
gi|13877757|gb|AAK43956.1|AF370141_1 unknown protein [Arabidopsis thaliana]
gi|15293301|gb|AAK93761.1| unknown protein [Arabidopsis thaliana]
gi|39545902|gb|AAR28014.1| TAF11 [Arabidopsis thaliana]
gi|332658898|gb|AEE84298.1| transcription initiation factor TFIID subunit D9 [Arabidopsis
thaliana]
Length = 210
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 50/61 (81%)
Query: 86 VDVELGKFPSSSDPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLN 145
+DVEL K+P+SSDPAKMAKMQ IL+QFTEDQM+RYESFRRSALQ+ M+++ I S
Sbjct: 86 MDVELTKYPTSSDPAKMAKMQTILSQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQK 145
Query: 146 L 146
+
Sbjct: 146 I 146
>gi|357135940|ref|XP_003569565.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Brachypodium distachyon]
Length = 216
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 90/162 (55%), Gaps = 31/162 (19%)
Query: 5 KDPFEAALEE--SPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDN---------- 52
KDPFEAA+EE SP DSP QP+ AA + A + +++D
Sbjct: 2 KDPFEAAVEEQESPPDSP------AQPEEDAAAEAPHA-----ISEDYDGGAASGGPRAP 50
Query: 53 -----LESQAPMSVSAGPAAKMTMSKNKDEYDEEDDENVDVE--LGKFPS-SSDPAKMAK 104
S A S S PA T +++ E D++DDE +E L K PS +SDP K+AK
Sbjct: 51 PPRPQPSSHAGPSTSVAPALPRTKVRHQKEQDDDDDEEDHMEVDLDKLPSGTSDPDKLAK 110
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNL 146
M A+L+QFTEDQMNRYESFRRS QKSNM+++ + S +
Sbjct: 111 MNALLSQFTEDQMNRYESFRRSGFQKSNMKKLLASITGSQKI 152
>gi|413950935|gb|AFW83584.1| transcription initiation factor TFIID subunit 11, mRNA [Zea mays]
Length = 199
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 14/147 (9%)
Query: 5 KDPFEAALEESPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDN----LESQAPMS 60
KDPFEA +EE + AA E +++D + AP S
Sbjct: 2 KDPFEADVEE---------QDSPPESPAPPEDEPGAAGPAEDPEDYDGGPPPRQPSAPAS 52
Query: 61 VSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSS-DPAKMAKMQAILNQFTEDQMNR 119
+AG AK + + + E D+ED++ ++V+L K PSS+ DP K+AKM AIL+QFT+ QMNR
Sbjct: 53 HAAGAKAKARVHREQQEDDDEDEDQIEVDLEKLPSSTGDPDKLAKMNAILSQFTQQQMNR 112
Query: 120 YESFRRSALQKSNMRRVFIASLNSLNL 146
YESFRRS QKSNM+R+ + S +
Sbjct: 113 YESFRRSGFQKSNMKRLLASITGSQKI 139
>gi|223973147|gb|ACN30761.1| unknown [Zea mays]
Length = 203
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 14/147 (9%)
Query: 5 KDPFEAALEESPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDN----LESQAPMS 60
KDPFEA +EE + AA E +++D + AP S
Sbjct: 2 KDPFEADVEE---------QDSPPESPAPPEDEPGAAGPAEDPEDYDGGPPPRQPSAPAS 52
Query: 61 VSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSS-DPAKMAKMQAILNQFTEDQMNR 119
+AG AK + + + E D+ED++ ++V+L K PSS+ DP K+AKM AIL+QFT+ QMNR
Sbjct: 53 HAAGAKAKARVHREQQEDDDEDEDQIEVDLEKLPSSTGDPDKLAKMNAILSQFTQQQMNR 112
Query: 120 YESFRRSALQKSNMRRVFIASLNSLNL 146
YESFRRS QKSNM+R+ + S +
Sbjct: 113 YESFRRSGFQKSNMKRLLASITGSQKI 139
>gi|297597371|ref|NP_001043872.2| Os01g0680400 [Oryza sativa Japonica Group]
gi|56202157|dbj|BAD73490.1| transcription initiation factor IID p30 beta chain-like [Oryza
sativa Japonica Group]
gi|56202287|dbj|BAD73746.1| transcription initiation factor IID p30 beta chain-like [Oryza
sativa Japonica Group]
gi|215695424|dbj|BAG90663.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619047|gb|EEE55179.1| hypothetical protein OsJ_03014 [Oryza sativa Japonica Group]
gi|255673555|dbj|BAF05786.2| Os01g0680400 [Oryza sativa Japonica Group]
Length = 211
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 87/147 (59%), Gaps = 6/147 (4%)
Query: 5 KDPFEAALEE--SPGDSP--DELEIETQPQTGTAAGSATAAVTGELEDEFDNLESQAPMS 60
KDPFEAA+EE SP +SP +E + P+ G S + L +
Sbjct: 2 KDPFEAAVEEQESPPESPAANEEDAAGAPE-GYDGASGSRGPPLRLPPSRAAPSGSGGAA 60
Query: 61 VSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPS-SSDPAKMAKMQAILNQFTEDQMNR 119
+A + + K + E +++++++++V+L K PS +SDP K+AKM AIL+QFTEDQMNR
Sbjct: 61 AAAARGKVVRVQKEQQEEEDDEEDHMEVDLDKLPSGTSDPDKLAKMNAILSQFTEDQMNR 120
Query: 120 YESFRRSALQKSNMRRVFIASLNSLNL 146
YESFRRS QKSNM+++ + S +
Sbjct: 121 YESFRRSGFQKSNMKKLLASITGSQKI 147
>gi|226504464|ref|NP_001151617.1| transcription initiation factor TFIID subunit 11 [Zea mays]
gi|195648128|gb|ACG43532.1| transcription initiation factor TFIID subunit 11 [Zea mays]
Length = 205
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 16/149 (10%)
Query: 5 KDPFEAALEESPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDN----LESQAPMS 60
KDPFEA +EE + AA E +++D + AP S
Sbjct: 2 KDPFEADVEE---------QDSPPESPAPPEDEPGAAGPAEDPEDYDGGPPPRQPSAPAS 52
Query: 61 --VSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSS-DPAKMAKMQAILNQFTEDQM 117
V+AG AK + + + E D+ED++ ++V+L K PSS+ DP K+AKM AIL+QFT+ QM
Sbjct: 53 HAVTAGAKAKARIHREQQEDDDEDEDQIEVDLEKLPSSTGDPDKLAKMNAILSQFTQQQM 112
Query: 118 NRYESFRRSALQKSNMRRVFIASLNSLNL 146
NRYESFRRS QKSNM+R+ + S +
Sbjct: 113 NRYESFRRSGFQKSNMKRLLASITGSQKI 141
>gi|242054007|ref|XP_002456149.1| hypothetical protein SORBIDRAFT_03g031220 [Sorghum bicolor]
gi|241928124|gb|EES01269.1| hypothetical protein SORBIDRAFT_03g031220 [Sorghum bicolor]
Length = 209
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 26/156 (16%)
Query: 5 KDPFEAALEESPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDNLESQAPMSVSAG 64
KDPFEAA+EE DSP E + + G AAG A D+ ++ + P ++
Sbjct: 2 KDPFEAAVEEQ--DSPPESPAPAEEEPG-AAGPA---------DDPEDYDGGGPRGLAPR 49
Query: 65 PAAKMT-------------MSKNKDEYDEEDDENVDVELGKFPSSS-DPAKMAKMQAILN 110
+ + + + E D+++++ ++V+L K PSS+ DP K+AKM AIL+
Sbjct: 50 QPSAPASHAAAAAAKAKGRVQREQQEDDDDEEDQMEVDLEKLPSSTGDPDKLAKMNAILS 109
Query: 111 QFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNL 146
QFTE QMNRYESFRRS QKSNM+R+ + S +
Sbjct: 110 QFTEQQMNRYESFRRSGFQKSNMKRLLVGITGSQKI 145
>gi|218188845|gb|EEC71272.1| hypothetical protein OsI_03273 [Oryza sativa Indica Group]
Length = 210
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 5 KDPFEAALEE--SPGDSP--DELEIETQPQT-GTAAGSATAAVTGELEDEFDNLESQAPM 59
KDPFEAA+EE SP +SP +E + P+ A+GS + + A
Sbjct: 2 KDPFEAAVEEQESPPESPAANEEDAAGAPEGYDGASGSRGPPLRLPPSRAAPSGSGGAAA 61
Query: 60 SVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPS-SSDPAKMAKMQAILNQFTEDQMN 118
+ + G K+ + + E +++++++++V+L K PS +SDP K+AKM AIL+QFTEDQMN
Sbjct: 62 AAARG---KVVRVQEQQEEEDDEEDHMEVDLDKLPSGTSDPDKLAKMNAILSQFTEDQMN 118
Query: 119 RYESFRRSALQKSNMRRVFIASLNSLNLVRL 149
RYESFRRS QKSNM++ +AS+ + L
Sbjct: 119 RYESFRRSGFQKSNMKK-LLASITGSQKISL 148
>gi|226501726|ref|NP_001152593.1| transcription initiation factor TFIID subunit 11 [Zea mays]
gi|195657891|gb|ACG48413.1| transcription initiation factor TFIID subunit 11 [Zea mays]
gi|414880994|tpg|DAA58125.1| TPA: transcription initiation factor TFIID subunit 11 [Zea mays]
Length = 205
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
Query: 86 VDVELGKFPSSS-DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
++V+L K PSS+ DP K+AKM AIL+QFT+ QMNRYESFRRS QKSNM+R+
Sbjct: 80 MEVDLDKLPSSTGDPDKLAKMNAILSQFTQQQMNRYESFRRSGFQKSNMKRLL 132
>gi|8778998|gb|AAF79913.1|AC022472_22 Contains similarity to PRO2134 mRNA from Homo sapiens gb|AF118094
[Arabidopsis thaliana]
Length = 233
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 67/137 (48%), Gaps = 39/137 (28%)
Query: 1 MKQSKDPFEAALEESPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDNLESQAPMS 60
MK SKDPFEAA+EE +SP E E +T A +V E
Sbjct: 61 MKHSKDPFEAAMEEQE-ESPVETE-QTLEGDERAVKKCKTSVVAE--------------- 103
Query: 61 VSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMA-KMQAILNQFTEDQMNR 119
+KNKDE VE K + +DP A KMQ IL+QFTE+QM+R
Sbjct: 104 -----------AKNKDE----------VEFTKNITGADPVTRANKMQKILSQFTEEQMSR 142
Query: 120 YESFRRSALQKSNMRRV 136
YESFRRS +KS+M ++
Sbjct: 143 YESFRRSGFKKSDMEKL 159
>gi|15223727|ref|NP_173429.1| TBP-associated factor 11B [Arabidopsis thaliana]
gi|332191800|gb|AEE29921.1| TBP-associated factor 11B [Arabidopsis thaliana]
Length = 204
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 67/137 (48%), Gaps = 39/137 (28%)
Query: 1 MKQSKDPFEAALEESPGDSPDELEIETQPQTGTAAGSATAAVTGELEDEFDNLESQAPMS 60
MK SKDPFEAA+EE +SP E E +T A +V E
Sbjct: 32 MKHSKDPFEAAMEEQE-ESPVETE-QTLEGDERAVKKCKTSVVAE--------------- 74
Query: 61 VSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMA-KMQAILNQFTEDQMNR 119
+KNKDE VE K + +DP A KMQ IL+QFTE+QM+R
Sbjct: 75 -----------AKNKDE----------VEFTKNITGADPVTRANKMQKILSQFTEEQMSR 113
Query: 120 YESFRRSALQKSNMRRV 136
YESFRRS +KS+M ++
Sbjct: 114 YESFRRSGFKKSDMEKL 130
>gi|297850404|ref|XP_002893083.1| hypothetical protein ARALYDRAFT_472225 [Arabidopsis lyrata subsp.
lyrata]
gi|297338925|gb|EFH69342.1| hypothetical protein ARALYDRAFT_472225 [Arabidopsis lyrata subsp.
lyrata]
Length = 141
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 28/30 (93%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNM 133
KMQ IL+QFTEDQM+RYESFRRSA +KS+M
Sbjct: 35 KMQTILSQFTEDQMSRYESFRRSAFKKSDM 64
>gi|303274276|ref|XP_003056460.1| transcription initiation factor TFIID subunit 1 [Micromonas pusilla
CCMP1545]
gi|226462544|gb|EEH59836.1| transcription initiation factor TFIID subunit 1 [Micromonas pusilla
CCMP1545]
Length = 139
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+M ++N FTE+QMNRYES+RRS+L KS ++R+F
Sbjct: 28 EMVELVNIFTEEQMNRYESYRRSSLPKSVLKRIF 61
>gi|341874020|gb|EGT29955.1| CBN-TAF-11.1 protein [Caenorhabditis brenneri]
Length = 349
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNLVRLFMFSVTLL 157
K Q +L+ F+++Q+ RYES+RRS+ QKS +RR+ N N+ + + ++ L
Sbjct: 239 KTQLLLSNFSQEQLERYESYRRSSFQKSTIRRLIAQYTNGANVNQSVVIAIAGL 292
>gi|443711304|gb|ELU05132.1| hypothetical protein CAPTEDRAFT_182628 [Capitella teleta]
Length = 196
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
KMQ +++ F+EDQ+NRYE FRR+ KS++RR+
Sbjct: 90 KMQVLVSNFSEDQLNRYEMFRRACFPKSSIRRLM 123
>gi|17570127|ref|NP_508727.1| Protein TAF-11.1 [Caenorhabditis elegans]
gi|351060220|emb|CCD67844.1| Protein TAF-11.1 [Caenorhabditis elegans]
Length = 345
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNLVRLFMFSVTLL 157
K Q +L+ F+++Q+ RYES+RRS+ QKS +RR+ +N+ + + ++ L
Sbjct: 235 KTQVLLSNFSQEQLERYESYRRSSFQKSTIRRLISQYTGGVNVGQSVVIAIAGL 288
>gi|349803107|gb|AEQ17026.1| putative taf11 rna polymerase tata box binding protein
(TBP)-associated [Pipa carvalhoi]
Length = 86
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNL 146
D K+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R I S+ ++
Sbjct: 11 DEDKIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKR-LIQSITGCSI 58
>gi|255070759|ref|XP_002507461.1| transcription initiation factor TFIID subunit 1 [Micromonas sp.
RCC299]
gi|226522736|gb|ACO68719.1| transcription initiation factor TFIID subunit 1 [Micromonas sp.
RCC299]
Length = 118
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 103 AKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
A+M +L+QFT +QM RYE +RRS+L KS ++R+F
Sbjct: 10 AQMVDLLSQFTSEQMTRYECYRRSSLPKSILKRLF 44
>gi|410040670|ref|XP_003950861.1| PREDICTED: transcription initiation factor TFIID subunit 11 isoform
1 [Pan troglodytes]
Length = 154
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 31/42 (73%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIA 139
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R ++
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRHWMC 140
>gi|426352838|ref|XP_004043912.1| PREDICTED: transcription initiation factor TFIID subunit 11 isoform
2 [Gorilla gorilla gorilla]
Length = 154
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 31/42 (73%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIA 139
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R ++
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRHWMC 140
>gi|308510935|ref|XP_003117650.1| CRE-TAF-11.1 protein [Caenorhabditis remanei]
gi|308238296|gb|EFO82248.1| CRE-TAF-11.1 protein [Caenorhabditis remanei]
Length = 345
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 9/70 (12%)
Query: 97 SDPAKMA---------KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNLV 147
+DPA A K Q +L+ F+++Q+ RYES+RRS+ QKS +RR+ N+
Sbjct: 219 TDPASRAEEENEISRLKTQLLLSNFSQEQLERYESYRRSSFQKSTIRRLITQFTGGANIG 278
Query: 148 RLFMFSVTLL 157
+ + ++ L
Sbjct: 279 QSVVIAIAGL 288
>gi|126326883|ref|XP_001380196.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Monodelphis domestica]
Length = 215
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRV---FIASLNSLNLV 147
D ++ +MQ +++ F+E+Q+NRYE +RRSA K+ ++R+ +L S N+V
Sbjct: 103 DEDEIERMQILVSSFSEEQLNRYEMYRRSAFPKATIKRLIQTITGTLVSQNVV 155
>gi|332259599|ref|XP_003278874.1| PREDICTED: transcription initiation factor TFIID subunit 11 isoform
2 [Nomascus leucogenys]
Length = 154
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 31/42 (73%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIA 139
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R ++
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRHWMC 140
>gi|410958984|ref|XP_003986092.1| PREDICTED: transcription initiation factor TFIID subunit 11 isoform
2 [Felis catus]
Length = 154
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 31/42 (73%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIA 139
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R ++
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRHWMC 140
>gi|394953994|ref|NP_001257417.1| transcription initiation factor TFIID subunit 11 isoform 2 [Homo
sapiens]
gi|194378830|dbj|BAG63580.1| unnamed protein product [Homo sapiens]
Length = 154
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 31/42 (73%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIA 139
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R ++
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRHWMC 140
>gi|390368264|ref|XP_789830.3| PREDICTED: uncharacterized protein LOC584892 [Strongylocentrotus
purpuratus]
Length = 385
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLN----SLNLVRLFMFSVTLLY 158
KMQ +++ F+E+Q+NRYE FRRS+ K+ ++R F+ S+ S N+V + M + +Y
Sbjct: 279 KMQILVSAFSEEQLNRYEMFRRSSFPKAAIKR-FMQSITGSSVSQNVV-IAMSGIAKVY 335
>gi|402866736|ref|XP_003897531.1| PREDICTED: transcription initiation factor TFIID subunit 11 isoform
2 [Papio anubis]
Length = 154
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 31/41 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFI 138
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R ++
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRHWM 139
>gi|50540162|ref|NP_001002548.1| transcription initiation factor TFIID subunit 11 [Danio rerio]
gi|49903009|gb|AAH76258.1| Zgc:92784 [Danio rerio]
Length = 206
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRV---FIASLNSLNLVRLFMFSVTLLY 158
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+ S S N+V + M + ++
Sbjct: 98 IQKMQVLVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGSSVSQNVV-IAMSGIAKVF 156
>gi|444729083|gb|ELW69511.1| Transcription initiation factor TFIID subunit 11 [Tupaia chinensis]
Length = 211
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|348576354|ref|XP_003473952.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Cavia porcellus]
Length = 210
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNL---VRLFMFSV 154
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R I S+ ++ V + M +
Sbjct: 98 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKR-LIQSITGTSVSQNVVIAMSGI 156
Query: 155 TLLY 158
+ ++
Sbjct: 157 SKVF 160
>gi|410958982|ref|XP_003986091.1| PREDICTED: transcription initiation factor TFIID subunit 11 isoform
1 [Felis catus]
Length = 211
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNL---VRLFMFSV 154
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R I S+ ++ V + M +
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKR-LIQSITGTSVSQNVVIAMSGI 157
Query: 155 TLLY 158
+ ++
Sbjct: 158 SKVF 161
>gi|158253893|gb|AAI54291.1| Zgc:92784 protein [Danio rerio]
Length = 206
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 98 IQKMQVLVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 133
>gi|431916845|gb|ELK16605.1| Transcription initiation factor TFIID subunit 11 [Pteropus alecto]
Length = 211
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|332259597|ref|XP_003278873.1| PREDICTED: transcription initiation factor TFIID subunit 11 isoform
1 [Nomascus leucogenys]
Length = 211
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|402866734|ref|XP_003897530.1| PREDICTED: transcription initiation factor TFIID subunit 11 isoform
1 [Papio anubis]
Length = 211
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNL---VRLFMFSV 154
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R I S+ ++ V + M +
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKR-LIQSITGTSVSQNVVIAMSGI 157
Query: 155 TLLY 158
+ ++
Sbjct: 158 SKVF 161
>gi|301757019|ref|XP_002914347.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Ailuropoda melanoleuca]
gi|281338442|gb|EFB14026.1| hypothetical protein PANDA_002241 [Ailuropoda melanoleuca]
Length = 210
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 98 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 137
>gi|349732112|ref|NP_001231834.1| transcription initiation factor TFIID subunit 11 [Gallus gallus]
Length = 217
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNL---VRLFMFSVTLLY 158
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R I S+ ++ V + M ++ ++
Sbjct: 109 IQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKR-LIQSITGTSVSQNVVIAMSGISKVF 167
>gi|387849226|ref|NP_001248485.1| transcription initiation factor TFIID subunit 11 [Macaca mulatta]
gi|355561614|gb|EHH18246.1| hypothetical protein EGK_14809 [Macaca mulatta]
gi|355748483|gb|EHH52966.1| hypothetical protein EGM_13515 [Macaca fascicularis]
gi|380815976|gb|AFE79862.1| transcription initiation factor TFIID subunit 11 [Macaca mulatta]
gi|383414607|gb|AFH30517.1| transcription initiation factor TFIID subunit 11 [Macaca mulatta]
gi|384949060|gb|AFI38135.1| transcription initiation factor TFIID subunit 11 [Macaca mulatta]
Length = 211
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNL---VRLFMFSV 154
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R I S+ ++ V + M +
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKR-LIQSITGTSVSQNVVIAMSGI 157
Query: 155 TLLY 158
+ ++
Sbjct: 158 SKVF 161
>gi|355723070|gb|AES07773.1| TAF11 RNA polymerase II, TATA box binding protein -associated
factor, 28kDa [Mustela putorius furo]
Length = 210
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNL---VRLFMFSV 154
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R I S+ ++ V + M +
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKR-LIQSITGTSVSQNVVIAMSGI 157
Query: 155 TLLY 158
+ ++
Sbjct: 158 SKVF 161
>gi|296434323|ref|NP_001171823.1| transcription initiation factor TFIID subunit 11 [Sus scrofa]
Length = 211
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|114607008|ref|XP_518419.2| PREDICTED: transcription initiation factor TFIID subunit 11 isoform
2 [Pan troglodytes]
gi|397474215|ref|XP_003808582.1| PREDICTED: transcription initiation factor TFIID subunit 11 [Pan
paniscus]
gi|410213034|gb|JAA03736.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [Pan troglodytes]
gi|410258928|gb|JAA17430.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [Pan troglodytes]
gi|410291852|gb|JAA24526.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [Pan troglodytes]
gi|410328809|gb|JAA33351.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [Pan troglodytes]
Length = 211
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|426352836|ref|XP_004043911.1| PREDICTED: transcription initiation factor TFIID subunit 11 isoform
1 [Gorilla gorilla gorilla]
Length = 211
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|291396073|ref|XP_002714671.1| PREDICTED: TBP-associated factor 11 [Oryctolagus cuniculus]
Length = 211
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNL---VRLFMFSV 154
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R I S+ ++ V + M +
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKR-LIQSITGTSVSQNVVIAMSGI 157
Query: 155 TLLY 158
+ ++
Sbjct: 158 SKVF 161
>gi|197100176|ref|NP_001127402.1| transcription initiation factor TFIID subunit 11 [Pongo abelii]
gi|62511198|sp|Q5RA91.1|TAF11_PONAB RecName: Full=Transcription initiation factor TFIID subunit 11;
AltName: Full=TFIID subunit p30-beta; AltName:
Full=Transcription initiation factor TFIID 28 kDa
subunit; Short=TAF(II)28; Short=TAFII-28; Short=TAFII28
gi|55729165|emb|CAH91319.1| hypothetical protein [Pongo abelii]
Length = 211
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|296197962|ref|XP_002746503.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
isoform 1 [Callithrix jacchus]
Length = 211
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|77735507|ref|NP_001029448.1| transcription initiation factor TFIID subunit 11 [Bos taurus]
gi|73586793|gb|AAI03181.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [Bos taurus]
gi|296474563|tpg|DAA16678.1| TPA: TAF11 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 28kDa [Bos taurus]
gi|440912237|gb|ELR61823.1| Transcription initiation factor TFIID subunit 11 [Bos grunniens
mutus]
Length = 210
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 98 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 137
>gi|403261640|ref|XP_003923223.1| PREDICTED: transcription initiation factor TFIID subunit 11
[Saimiri boliviensis boliviensis]
Length = 211
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|344298790|ref|XP_003421074.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Loxodonta africana]
Length = 210
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 98 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 137
>gi|225707274|gb|ACO09483.1| Transcription initiation factor TFIID subunit 11 [Osmerus mordax]
Length = 203
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 91 DEDEIQKMQVLVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 130
>gi|5032151|ref|NP_005634.1| transcription initiation factor TFIID subunit 11 isoform 1 [Homo
sapiens]
gi|3024707|sp|Q15544.1|TAF11_HUMAN RecName: Full=Transcription initiation factor TFIID subunit 11;
AltName: Full=TFIID subunit p30-beta; AltName:
Full=Transcription initiation factor TFIID 28 kDa
subunit; Short=TAF(II)28; Short=TAFII-28; Short=TAFII28
gi|791057|emb|CAA58780.1| transcription factor TFIID subunit TAFII28 [Homo sapiens]
gi|2645175|dbj|BAA23620.1| TFIID subunit p30beta [Homo sapiens]
gi|18314398|gb|AAH21972.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [Homo sapiens]
gi|27978812|gb|AAO25652.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [Homo sapiens]
gi|49457089|emb|CAG46865.1| TAF11 [Homo sapiens]
gi|54695678|gb|AAV38211.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [Homo sapiens]
gi|54695680|gb|AAV38212.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [Homo sapiens]
gi|61358020|gb|AAX41488.1| TAF11 RNA polymerase II TATA box binding protein [synthetic
construct]
gi|61358024|gb|AAX41489.1| TAF11 RNA polymerase II TATA box binding protein [synthetic
construct]
gi|123993127|gb|ABM84165.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [synthetic construct]
gi|124000119|gb|ABM87568.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [synthetic construct]
gi|189069228|dbj|BAG36260.1| unnamed protein product [Homo sapiens]
gi|208967909|dbj|BAG73793.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [synthetic construct]
gi|1586462|prf||2204193A TFIIB:SUBUNIT=p30beta
Length = 211
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|60827031|gb|AAX36781.1| TAF11 RNA polymerase II TATA box-binding protein [synthetic
construct]
Length = 212
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|395832207|ref|XP_003789166.1| PREDICTED: transcription initiation factor TFIID subunit 11
[Otolemur garnettii]
Length = 211
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|57094432|ref|XP_532116.1| PREDICTED: transcription initiation factor TFIID subunit 11 isoform
1 [Canis lupus familiaris]
Length = 211
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|149043457|gb|EDL96908.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_b [Rattus norvegicus]
Length = 206
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 29/37 (78%)
Query: 101 KMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 102 EIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|56605776|ref|NP_001008351.1| transcription initiation factor TFIID subunit 11 [Rattus
norvegicus]
gi|62511139|sp|Q5U1X0.1|TAF11_RAT RecName: Full=Transcription initiation factor TFIID subunit 11;
AltName: Full=TFIID subunit p30-beta; AltName:
Full=Transcription initiation factor TFIID 28 kDa
subunit; Short=TAF(II)28; Short=TAFII-28; Short=TAFII28
gi|55562731|gb|AAH86421.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Rattus norvegicus]
gi|149043455|gb|EDL96906.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Rattus norvegicus]
gi|149043456|gb|EDL96907.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Rattus norvegicus]
Length = 211
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 103 IQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|213512190|ref|NP_001134864.1| transcription initiation factor TFIID subunit 11 [Salmo salar]
gi|209736676|gb|ACI69207.1| Transcription initiation factor TFIID subunit 11 [Salmo salar]
Length = 203
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 91 DEDEIQKMQVLVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 130
>gi|348502906|ref|XP_003439008.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Oreochromis niloticus]
Length = 204
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 92 DEDEIQKMQVLVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 131
>gi|145342796|ref|XP_001416275.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576500|gb|ABO94568.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 140
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 103 AKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIA----SLNSLNLVRL 149
A+M +L FT QM RYE FRRS L K+ +RR+F A +LN+ L+ L
Sbjct: 27 ARMLELLKTFTPSQMERYECFRRSNLSKTMLRRLFKAASGVTLNANGLIIL 77
>gi|30794436|ref|NP_081112.1| transcription initiation factor TFIID subunit 11 [Mus musculus]
gi|62511223|sp|Q99JX1.1|TAF11_MOUSE RecName: Full=Transcription initiation factor TFIID subunit 11;
AltName: Full=TFIID subunit p30-beta; AltName:
Full=Transcription initiation factor TFIID 28 kDa
subunit; Short=TAF(II)28; Short=TAFII-28; Short=TAFII28
gi|13542802|gb|AAH05603.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
gi|26341438|dbj|BAC34381.1| unnamed protein product [Mus musculus]
gi|74228795|dbj|BAE21886.1| unnamed protein product [Mus musculus]
gi|148690608|gb|EDL22555.1| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
Length = 211
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 103 IQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|346472529|gb|AEO36109.1| hypothetical protein [Amblyomma maculatum]
Length = 224
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNLVRLFMFSVT 155
KMQ +++ F+E Q+NRYE +RRSA K+ ++R + S+ ++ + + +V+
Sbjct: 117 KMQVLVSNFSESQLNRYEMYRRSAFPKAAVKR-LVQSITGCSVSQNVVIAVS 167
>gi|432866571|ref|XP_004070869.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Oryzias latipes]
Length = 206
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 98 IQKMQVLVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 133
>gi|149732136|ref|XP_001498630.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Equus caballus]
Length = 211
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 103 IQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 138
>gi|426251029|ref|XP_004019234.1| PREDICTED: transcription initiation factor TFIID subunit 11 [Ovis
aries]
Length = 335
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 227 IQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 262
>gi|410900027|ref|XP_003963498.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Takifugu rubripes]
Length = 205
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 93 DEDEIQKMQVLVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 132
>gi|27674899|ref|XP_220843.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Rattus norvegicus]
gi|109491633|ref|XP_001081219.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Rattus norvegicus]
Length = 207
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 99 IQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 134
>gi|268579017|ref|XP_002644491.1| C. briggsae CBR-TAF-11.1 protein [Caenorhabditis briggsae]
Length = 352
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 27/34 (79%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
K Q +L+ F+++Q+ RYES+RRS+ QKS +RR+
Sbjct: 243 KSQILLSNFSQEQLERYESYRRSSFQKSTIRRLI 276
>gi|335773290|gb|AEH58343.1| transcription initiation factor TFIID subunit 1-like protein [Equus
caballus]
Length = 129
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 65 IQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 100
>gi|126309885|ref|XP_001378207.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Monodelphis domestica]
Length = 224
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 116 IQKMQILVSSFSEEQLNRYEMYRRSAFPKAAVKRLI 151
>gi|395533995|ref|XP_003769034.1| PREDICTED: transcription initiation factor TFIID subunit 11
[Sarcophilus harrisii]
Length = 243
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 131 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 170
>gi|427786913|gb|JAA58908.1| Putative transcription initiation factor tfii-d subunit
[Rhipicephalus pulchellus]
Length = 228
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNLVRLFMFSVT 155
KMQ +++ F+E Q+NRYE +RRSA K+ ++R + S+ ++ + + +V+
Sbjct: 121 KMQVLVSNFSEAQLNRYEMYRRSAFPKAAVKR-LVQSITGCSVSQNVVIAVS 171
>gi|327271317|ref|XP_003220434.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Anolis carolinensis]
Length = 162
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 54 IQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 89
>gi|349732114|ref|NP_001231835.1| transcription initiation factor TFIID subunit 11 [Taeniopygia
guttata]
Length = 207
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 95 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 134
>gi|120577504|gb|AAI30173.1| LOC100037039 protein [Xenopus laevis]
Length = 182
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 71 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 110
>gi|349732107|ref|NP_001091242.2| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [Xenopus laevis]
Length = 191
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 80 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 119
>gi|326933868|ref|XP_003213020.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Meleagris gallopavo]
Length = 169
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 57 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 96
>gi|149435257|ref|XP_001519104.1| PREDICTED: transcription initiation factor TFIID subunit 11-like,
partial [Ornithorhynchus anatinus]
Length = 154
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 46 IQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 81
>gi|349732106|ref|NP_001120885.2| TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 28kDa [Xenopus (Silurana) tropicalis]
Length = 190
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 79 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 118
>gi|405951873|gb|EKC19746.1| Transcription initiation factor TFIID subunit 11 [Crassostrea
gigas]
Length = 199
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 27/34 (79%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
KMQ +++ FTE+Q+NRYE FRR+A ++ ++R+
Sbjct: 94 KMQVLVSNFTEEQLNRYEMFRRAAFPRAAIKRLM 127
>gi|183986188|gb|AAI66268.1| taf11 protein [Xenopus (Silurana) tropicalis]
Length = 182
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 71 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 110
>gi|332021398|gb|EGI61766.1| Transcription initiation factor TFIID subunit 11 [Acromyrmex
echinatior]
Length = 245
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
MQ +++ FTEDQ++RYE +RRSA K+ ++R+
Sbjct: 139 MQVLVSNFTEDQLDRYEMYRRSAFPKAAIKRIM 171
>gi|354488382|ref|XP_003506349.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Cricetulus griseus]
Length = 169
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 57 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 96
>gi|358336741|dbj|GAA55178.1| transcription initiation factor TFIID subunit 11 [Clonorchis
sinensis]
Length = 277
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF--IASLNSLNLVRLFMFSVTLLY 158
K+ A+L F E+Q+NR+E+FRR+ K+++RR+ +AS V + + +T +Y
Sbjct: 172 KLLALLAHFDEEQLNRFETFRRATFAKASVRRLIQSVASCAVSQNVVIAIAGMTKVY 228
>gi|307168073|gb|EFN61379.1| Transcription initiation factor TFIID subunit 11 [Camponotus
floridanus]
Length = 243
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
MQ +++ FTEDQ++RYE +RRSA K+ ++R+
Sbjct: 137 MQVLVSNFTEDQLDRYEMYRRSAFPKAAIKRIM 169
>gi|320167708|gb|EFW44607.1| transcription initiation factor TFIID subunit 11 [Capsaspora
owczarzaki ATCC 30864]
Length = 480
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 18/75 (24%)
Query: 69 MTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTEDQMNRYESFRRSAL 128
+T +K+ DE D E D + K++ +++ FT +Q++RYE +RRS
Sbjct: 355 ITFAKDDDEIDLESDRD------------------KLKLLVDAFTPEQLHRYECYRRSGF 396
Query: 129 QKSNMRRVFIASLNS 143
++ +R+V LNS
Sbjct: 397 PRAVIRKVMQQQLNS 411
>gi|442760115|gb|JAA72216.1| Putative transcription initiation factor tfii-d subunit [Ixodes
ricinus]
Length = 183
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNLVRLFMFSVT 155
KMQ +++ F+E Q+NRYE +RRSA K+ ++R + S+ ++ + + +V+
Sbjct: 78 KMQVLVSNFSEAQLNRYEMYRRSAFPKAAVKR-LVQSITGCSVSQNVVIAVS 128
>gi|12835252|dbj|BAB23203.1| unnamed protein product [Mus musculus]
Length = 111
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 3 IQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 38
>gi|209738498|gb|ACI70118.1| Transcription initiation factor TFIID subunit 11 [Salmo salar]
gi|303661601|gb|ADM16044.1| Transcription initiation factor TFIID subunit 11 [Salmo salar]
Length = 168
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 56 DEDEIQKMQVLVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 95
>gi|168055949|ref|XP_001779985.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668590|gb|EDQ55194.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 102
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 108 ILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+L FT +QM+RYE +RRS Q++NMRR+
Sbjct: 1 VLATFTPEQMSRYECYRRSGFQRANMRRLL 30
>gi|324524643|gb|ADY48448.1| Transcription initiation factor TFIID subunit 11, partial [Ascaris
suum]
Length = 275
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
KMQ ++ F+++Q+ RYE FRRS+ KS +RR+
Sbjct: 188 KMQVLVANFSQEQLARYECFRRSSFPKSTIRRLI 221
>gi|91079913|ref|XP_966985.1| PREDICTED: similar to Transcription initiation factor TFIID subunit
11 (Transcription initiation factor TFIID 28 kDa subunit
beta) (p28-beta) (TAFII30 beta) [Tribolium castaneum]
gi|270004575|gb|EFA01023.1| hypothetical protein TcasGA2_TC003938 [Tribolium castaneum]
Length = 199
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 19/76 (25%)
Query: 81 EDDENV----DVELGKFP-SSSDPAKMAKM--------------QAILNQFTEDQMNRYE 121
+D+ENV D+ + + P SSS PAK ++ Q +++ FTEDQ++RYE
Sbjct: 50 KDEENVYLESDIIMPEAPQSSSAPAKKKEVKTRKEMEEEEREKMQVLVSNFTEDQLDRYE 109
Query: 122 SFRRSALQKSNMRRVF 137
+RRSA K+ ++R+
Sbjct: 110 MYRRSAFPKAAIKRLM 125
>gi|47229288|emb|CAG04040.1| unnamed protein product [Tetraodon nigroviridis]
Length = 152
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 41 DEDEIQKMQVLVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 80
>gi|342321232|gb|EGU13166.1| ADP/ATP carrier receptor [Rhodotorula glutinis ATCC 204091]
Length = 837
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 17/97 (17%)
Query: 66 AAKMTMSKNKDEYDEEDD--ENVDVELGKFPSSSDPAKMAK----MQAILNQFTEDQMNR 119
A ++ + +E D ED+ E D E G S+ ++AK ++ +L F E QM+R
Sbjct: 691 AGQIVTGPDGEEQDAEDEVFEFSDDEFG-----SNQREVAKQKEDLRVLLEHFDEQQMDR 745
Query: 120 YESFRRSALQKSNMRRVFIASLNS------LNLVRLF 150
YE++RRS L KS++R++ L L +VR F
Sbjct: 746 YEAYRRSGLTKSSVRKLVNQVLQQSVSPSILTVVRGF 782
>gi|391332484|ref|XP_003740664.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Metaseiulus occidentalis]
Length = 205
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNLVRLFMFSVT 155
KM+ +++ F+EDQ+NRYE +RR+A K+ ++R + S+ ++ + + +++
Sbjct: 96 KMRVLVSSFSEDQLNRYEMYRRAAFPKAAIKR-LVQSIAGCSVSQNVVIAIS 146
>gi|324518927|gb|ADY47239.1| Transcription initiation factor TFIID subunit 11 [Ascaris suum]
Length = 296
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
KMQ ++ F+++Q+ RYE FRRS+ KS +RR+
Sbjct: 188 KMQVLVANFSQEQLARYECFRRSSFPKSTIRRLI 221
>gi|430814289|emb|CCJ28464.1| unnamed protein product [Pneumocystis jirovecii]
Length = 149
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLN 142
D KM +++ +L+ F EDQM RYE FRR+ L +S+ RR+ + LN
Sbjct: 37 DEEKM-RLKILLDSFNEDQMRRYEIFRRANLDRSSFRRMVNSMLN 80
>gi|430814283|emb|CCJ28458.1| unnamed protein product [Pneumocystis jirovecii]
Length = 148
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLN 142
D KM +++ +L+ F EDQM RYE FRR+ L +S+ RR+ + LN
Sbjct: 36 DEEKM-RLKILLDSFNEDQMRRYEIFRRANLDRSSFRRMVNSMLN 79
>gi|440494450|gb|ELQ76829.1| Transcription initiation factor TFIID, subunit TAF11
[Trachipleistophora hominis]
Length = 143
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 99 PAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLN 142
P++ ++ I++Q TE Q++RYESFRRS K N++++ LN
Sbjct: 34 PSQTVQLLQIVDQMTEPQLHRYESFRRSGFLKVNIKKLVNNVLN 77
>gi|350416840|ref|XP_003491129.1| PREDICTED: hypothetical protein LOC100748775 [Bombus impatiens]
Length = 243
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
MQ +++ FTEDQ++RYE +RR+A K+ ++R+
Sbjct: 137 MQVLVSNFTEDQLDRYEMYRRAAFPKAAIKRIM 169
>gi|340729205|ref|XP_003402897.1| PREDICTED: putative TAF11-like protein ENSP00000332601-like [Bombus
terrestris]
Length = 243
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
MQ +++ FTEDQ++RYE +RR+A K+ ++R+
Sbjct: 137 MQVLVSNFTEDQLDRYEMYRRAAFPKAAIKRIM 169
>gi|307204822|gb|EFN83380.1| Transcription initiation factor TFIID subunit 11 [Harpegnathos
saltator]
Length = 241
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
MQ +++ FTEDQ++RYE +RR+A K+ ++R+
Sbjct: 135 MQVLVSNFTEDQLDRYEMYRRAAFPKAAIKRIM 167
>gi|380016912|ref|XP_003692412.1| PREDICTED: uncharacterized protein LOC100866916 [Apis florea]
Length = 243
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
MQ +++ FTEDQ++RYE +RR+A K+ ++R+
Sbjct: 137 MQVLVSNFTEDQLDRYEMYRRAAFPKAAIKRIM 169
>gi|383855852|ref|XP_003703424.1| PREDICTED: uncharacterized protein LOC100877095 [Megachile
rotundata]
Length = 240
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
MQ +++ FTEDQ++RYE +RR+A K+ ++R+
Sbjct: 134 MQVLVSNFTEDQLDRYEMYRRAAFPKAAIKRIM 166
>gi|66511593|ref|XP_394618.2| PREDICTED: hypothetical protein LOC411144 isoform 1 [Apis
mellifera]
Length = 243
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
MQ +++ FTEDQ++RYE +RR+A K+ ++R+
Sbjct: 137 MQVLVSNFTEDQLDRYEMYRRAAFPKAAIKRIM 169
>gi|291222651|ref|XP_002731323.1| PREDICTED: TBP-associated factor 11-like [Saccoglossus kowalevskii]
Length = 215
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRV---FIASLNSLNLVRLFMFSVTLLY 158
KM +++ F+E+Q+NRYE +RRS+ K+ ++R+ I + S N+V + M + +Y
Sbjct: 109 KMHTLVSAFSEEQLNRYEMYRRSSFPKAVIKRLMQSIIGTSVSQNVV-IAMAGIAKVY 165
>gi|328865352|gb|EGG13738.1| transcription initiation factor TFIID subunit [Dictyostelium
fasciculatum]
Length = 410
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSLNLVR---LFMFSVTLLY 158
++ + +QF+E+Q RYE +RRS+ ++N+++V A + S N+ + + M +T ++
Sbjct: 305 IETLFDQFSEEQQTRYEFYRRSSFNRANIKKVMQAVIPSTNVNQNSVIIMAGITKVF 361
>gi|56755351|gb|AAW25855.1| SJCHGC03793 protein [Schistosoma japonicum]
Length = 293
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
K+ A+L F E+Q+NR+E+FRR+ L KS ++R+
Sbjct: 188 KLLALLAHFDEEQLNRFETFRRATLAKSVVKRLI 221
>gi|322800378|gb|EFZ21382.1| hypothetical protein SINV_05994 [Solenopsis invicta]
Length = 252
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
MQ +++ FTEDQ++RYE +RR+A K+ ++R+
Sbjct: 146 MQVLVSNFTEDQLDRYEMYRRAAFPKAAIKRIM 178
>gi|345569903|gb|EGX52729.1| hypothetical protein AOL_s00007g512 [Arthrobotrys oligospora ATCC
24927]
Length = 287
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
++ +++ F EDQM RYE++RR LQKS +++V
Sbjct: 162 RLNVLMDNFDEDQMARYEAYRRGTLQKSAVKKV 194
>gi|345480192|ref|XP_003424102.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Nasonia vitripennis]
Length = 189
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTEDQ++RYE +RR+A K+ ++R+
Sbjct: 83 MQVLVSNFTEDQLDRYEMYRRAAFPKAAIKRI 114
>gi|313232388|emb|CBY24055.1| unnamed protein product [Oikopleura dioica]
Length = 273
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 108 ILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
++N F+E+Q+NRYE +RRS QK+ ++R+
Sbjct: 169 LINNFSEEQINRYEMYRRSCFQKNQIKRLM 198
>gi|313219884|emb|CBY30799.1| unnamed protein product [Oikopleura dioica]
Length = 273
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 108 ILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
++N F+E+Q+NRYE +RRS QK+ ++R+
Sbjct: 169 LINNFSEEQINRYEMYRRSCFQKNQIKRLM 198
>gi|170038770|ref|XP_001847221.1| transcription initiation factor TFIID subunit 11 [Culex
quinquefasciatus]
gi|167882467|gb|EDS45850.1| transcription initiation factor TFIID subunit 11 [Culex
quinquefasciatus]
Length = 209
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 28/36 (77%)
Query: 102 MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+ KMQ +++ FTE+Q++RYE +RR+A K+ ++R+
Sbjct: 99 LEKMQVLVSNFTEEQLDRYEMYRRAAFPKAAVKRLM 134
>gi|6650834|gb|AAF22038.1|AF118094_33 PRO2134 [Homo sapiens]
Length = 127
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
MQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 1 MQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 33
>gi|344245410|gb|EGW01514.1| Transcription initiation factor TFIID subunit 11 [Cricetulus
griseus]
Length = 106
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
MQ +++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 1 MQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 33
>gi|241856636|ref|XP_002416068.1| transcription initiation factor TFII-D subunit, putative [Ixodes
scapularis]
gi|215510282|gb|EEC19735.1| transcription initiation factor TFII-D subunit, putative [Ixodes
scapularis]
Length = 139
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
KMQ +++ F+E Q+NRYE +RRSA K+ ++R+
Sbjct: 34 KMQVLVSNFSEAQLNRYEMYRRSAFPKAAVKRLV 67
>gi|443921779|gb|ELU41331.1| TAFII28 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 520
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 109 LNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNS 143
+N FT DQ+ RYE++RRS L K ++RR SL +
Sbjct: 91 MNSFTPDQLARYETYRRSTLNKQSVRRFIHQSLGA 125
>gi|444515278|gb|ELV10810.1| Protein FAM135A [Tupaia chinensis]
Length = 1340
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 29/40 (72%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ +++ F+E+Q+NRY+ + RSA K+ ++R+
Sbjct: 69 DEDEIQKMQILVSSFSEEQLNRYKMYHRSAFPKAAIKRLI 108
>gi|193664477|ref|XP_001952262.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Acyrthosiphon pisum]
Length = 170
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
KM+ +++ FTE+Q++RYE FRRS K+ ++R+
Sbjct: 63 KMRVLVSNFTEEQLDRYEMFRRSVFPKAAIKRI 95
>gi|402591072|gb|EJW85002.1| hypothetical protein WUBG_04088 [Wuchereria bancrofti]
Length = 289
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 51 DNLESQAPMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELG-KFPSSSDPAKMAKMQAIL 109
DN +S + +GP+ +N E + DDE + L K S D KMQ ++
Sbjct: 132 DNEKSSIRDASRSGPS-----RRNSPETENSDDEQNEAALQPKKLSRQDEILRQKMQILV 186
Query: 110 NQFTEDQMNRYESFRRSALQKSNMRRVF 137
F+ +Q+ RYE FRRS+ KS +R++
Sbjct: 187 ANFSAEQLARYECFRRSSFPKSAIRKLI 214
>gi|194765607|ref|XP_001964918.1| GF21885 [Drosophila ananassae]
gi|190617528|gb|EDV33052.1| GF21885 [Drosophila ananassae]
Length = 197
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 27/33 (81%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
+MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 89 RMQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRL 121
>gi|332373392|gb|AEE61837.1| unknown [Dendroctonus ponderosae]
Length = 224
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 118 MQVLVSNFTEEQLDRYEMYRRSAFPKAAIKRLM 150
>gi|125985191|ref|XP_001356359.1| GA17941 [Drosophila pseudoobscura pseudoobscura]
gi|195147028|ref|XP_002014482.1| GL19212 [Drosophila persimilis]
gi|54644682|gb|EAL33422.1| GA17941 [Drosophila pseudoobscura pseudoobscura]
gi|194106435|gb|EDW28478.1| GL19212 [Drosophila persimilis]
Length = 195
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 27/33 (81%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
+MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 87 RMQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRL 119
>gi|281205198|gb|EFA79391.1| transcription initiation factor TFIID subunit [Polysphondylium
pallidum PN500]
Length = 454
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
++ + FTE+Q RYE +RRS+L ++N+++V
Sbjct: 348 LEGLFTHFTEEQQTRYEFYRRSSLNRANVKKVM 380
>gi|256074941|ref|XP_002573780.1| transcription initiation factor iid 28 kD subunit-related
[Schistosoma mansoni]
gi|360043359|emb|CCD78772.1| transcription initiation factor iid, 28 kD subunit-related
[Schistosoma mansoni]
Length = 284
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
K+ A+L F E+Q+NR+E+FRR+ K+ +RR+
Sbjct: 179 KLLALLAHFDEEQLNRFETFRRATFTKAVVRRLI 212
>gi|321472662|gb|EFX83631.1| hypothetical protein DAPPUDRAFT_100237 [Daphnia pulex]
Length = 105
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 1 MQVLVSNFTEEQLDRYEMYRRSAFPKAAIKRL 32
>gi|321472849|gb|EFX83818.1| hypothetical protein DAPPUDRAFT_47763 [Daphnia pulex]
Length = 105
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 1 MQVLVSNFTEEQLDRYEMYRRSAFPKAAIKRL 32
>gi|198434319|ref|XP_002119604.1| PREDICTED: similar to TAF11 RNA polymerase II, TATA box binding
protein (TBP)-associated factor, 28kDa [Ciona
intestinalis]
Length = 181
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 97 SDPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRR 135
SD KM ++ F+E+Q+NRYE +RRS+ K++++R
Sbjct: 68 SDCEDRLKMHRLVTSFSEEQLNRYEMYRRSSFPKASIKR 106
>gi|432094190|gb|ELK25865.1| Transcription initiation factor TFIID subunit 11 [Myotis davidii]
Length = 124
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 97 SDPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
DP K KM+ +L F+E+Q+ RYE +R+S + +R V
Sbjct: 49 GDPNKAQKMRVLLASFSEEQLTRYEGYRQSTCPSTAIRHVV 89
>gi|312374502|gb|EFR22045.1| hypothetical protein AND_15818 [Anopheles darlingi]
Length = 200
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 27/34 (79%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
KMQ +++ FTE+Q++RYE +RR+A K+ ++R+
Sbjct: 92 KMQVLVSNFTEEQLDRYEMYRRAAFPKAAVKRLM 125
>gi|158294307|ref|XP_315522.4| AGAP005522-PA [Anopheles gambiae str. PEST]
gi|157015504|gb|EAA11172.4| AGAP005522-PA [Anopheles gambiae str. PEST]
Length = 209
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 27/33 (81%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
KMQ +++ FTE+Q++RYE +RR+A K+ ++R+
Sbjct: 101 KMQVLVSNFTEEQLDRYEMYRRAAFPKAAVKRL 133
>gi|351704047|gb|EHB06966.1| Transcription initiation factor TFIID subunit 11 [Heterocephalus
glaber]
Length = 211
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 98 DPAKMAKMQAILNQFTEDQM-NRYESFRRSALQKSNMRRVFIASLNSLNL---VRLFMFS 153
D ++ KMQ +++ F+E+Q+ NRYE +RRSA K+ ++R I S+ ++ V + M
Sbjct: 98 DEDEIQKMQILVSSFSEEQLKNRYEMYRRSAFPKAAIKR-LIQSITGTSVSQNVVIAMSG 156
Query: 154 VTLLY 158
++ ++
Sbjct: 157 ISKVF 161
>gi|242023943|ref|XP_002432390.1| transcription initiation factor TFIID subunit, putative [Pediculus
humanus corporis]
gi|212517813|gb|EEB19652.1| transcription initiation factor TFIID subunit, putative [Pediculus
humanus corporis]
Length = 194
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 90 MQVLVSNFTEEQLDRYEMYRRSAFPKAAIKRL 121
>gi|402468236|gb|EJW03421.1| hypothetical protein EDEG_02241 [Edhazardia aedis USNM 41457]
Length = 141
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 27/39 (69%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLN 142
++Q I++ TE+++ RYE+FRR+ K +R++ + LN
Sbjct: 36 RIQKIIDNMTEEELRRYETFRRAGFNKGGIRKICNSILN 74
>gi|195997765|ref|XP_002108751.1| hypothetical protein TRIADDRAFT_52029 [Trichoplax adhaerens]
gi|190589527|gb|EDV29549.1| hypothetical protein TRIADDRAFT_52029 [Trichoplax adhaerens]
Length = 206
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 15/93 (16%)
Query: 45 ELEDEFDNLESQAPMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAK 104
++E+ D+ P+++ A ++T S N +++ E N+D E +
Sbjct: 50 KVEETGDDYNFAKPLTIPK-KANEITTSANNNDHWER--RNIDEE------------TER 94
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
MQ ++ FTE+Q NRYE +RR+A KS ++R+
Sbjct: 95 MQLLVASFTEEQHNRYEMYRRAAFPKSIVKRLI 127
>gi|255717877|ref|XP_002555219.1| KLTH0G04202p [Lachancea thermotolerans]
gi|238936603|emb|CAR24782.1| KLTH0G04202p [Lachancea thermotolerans CBS 6340]
Length = 355
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 87 DVELGKFPSSSDPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
D +L P + + ++ +L E+QMNR+E FRR++L K+N++++
Sbjct: 124 DSQLAALPQPRELDQSEQLNLLLTNLDEEQMNRFEVFRRTSLAKNNIKKI 173
>gi|384246121|gb|EIE19612.1| TAFII28-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 198
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
K Q +L T +QM+RYE+FRRS L K +MR++
Sbjct: 90 KNQEVLKLLTPEQMDRYEAFRRSKLAKPSMRKLL 123
>gi|195063356|ref|XP_001996365.1| GH25071 [Drosophila grimshawi]
gi|193895230|gb|EDV94096.1| GH25071 [Drosophila grimshawi]
Length = 192
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 85 MQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRL 116
>gi|195339527|ref|XP_002036371.1| GM12298 [Drosophila sechellia]
gi|195577903|ref|XP_002078808.1| GD22339 [Drosophila simulans]
gi|194130251|gb|EDW52294.1| GM12298 [Drosophila sechellia]
gi|194190817|gb|EDX04393.1| GD22339 [Drosophila simulans]
Length = 196
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 89 MQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRL 120
>gi|24583119|ref|NP_723484.1| TBP-associated factor 11 [Drosophila melanogaster]
gi|1729813|sp|P49906.1|TAF11_DROME RecName: Full=Transcription initiation factor TFIID subunit 11;
AltName: Full=TAFII30 beta; AltName: Full=Transcription
initiation factor TFIID 28 kDa subunit beta;
Short=p28-beta
gi|457005|gb|AAB29541.1| dTAFII30 beta [Drosophila sp.]
gi|458678|gb|AAB19245.1| transcription initiation factor TFIID 28 kDa subunit [Drosophila
melanogaster]
gi|7297552|gb|AAF52806.1| TBP-associated factor 11 [Drosophila melanogaster]
gi|354682018|gb|AER29914.1| FI15907p1 [Drosophila melanogaster]
gi|739459|prf||2003282B transcription factor IID:SUBUNIT=beta
Length = 196
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 89 MQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRL 120
>gi|195385046|ref|XP_002051219.1| GJ14786 [Drosophila virilis]
gi|194147676|gb|EDW63374.1| GJ14786 [Drosophila virilis]
Length = 190
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 83 MQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRL 114
>gi|195473365|ref|XP_002088966.1| GE10358 [Drosophila yakuba]
gi|194175067|gb|EDW88678.1| GE10358 [Drosophila yakuba]
Length = 196
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 89 MQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRL 120
>gi|426248432|ref|XP_004017967.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Ovis aries]
Length = 209
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KMQ IL F+E+Q+N YE +RRSA K+ ++R+
Sbjct: 98 DEDEIQKMQ-ILVSFSEEQLNHYEMYRRSAFPKAAIKRLI 136
>gi|195438377|ref|XP_002067113.1| GK24821 [Drosophila willistoni]
gi|194163198|gb|EDW78099.1| GK24821 [Drosophila willistoni]
Length = 197
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 90 MQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRL 121
>gi|194859254|ref|XP_001969340.1| GG24011 [Drosophila erecta]
gi|190661207|gb|EDV58399.1| GG24011 [Drosophila erecta]
Length = 196
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 89 MQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRL 120
>gi|195118933|ref|XP_002003986.1| GI18207 [Drosophila mojavensis]
gi|193914561|gb|EDW13428.1| GI18207 [Drosophila mojavensis]
Length = 185
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 26/32 (81%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTE+Q++RYE +RRSA K+ ++R+
Sbjct: 78 MQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRL 109
>gi|268580607|ref|XP_002645286.1| Hypothetical protein CBG00192 [Caenorhabditis briggsae]
Length = 303
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
KM+ +L F+++Q +RYE FR+S Q++ +RR+
Sbjct: 203 KMEVLLKNFSKEQFDRYEVFRQSKFQRTMIRRLM 236
>gi|157107394|ref|XP_001649759.1| hypothetical protein AaeL_AAEL014850 [Aedes aegypti]
gi|157124884|ref|XP_001660570.1| hypothetical protein AaeL_AAEL010019 [Aedes aegypti]
gi|108868687|gb|EAT32912.1| AAEL014850-PA [Aedes aegypti]
gi|108873810|gb|EAT38035.1| AAEL010019-PA [Aedes aegypti]
Length = 226
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 26/32 (81%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTE+Q++RYE +RR+A K+ ++R+
Sbjct: 119 MQVLVSNFTEEQLDRYEMYRRAAFPKAAVKRL 150
>gi|393909235|gb|EFO16938.2| hypothetical protein LOAG_11565 [Loa loa]
Length = 288
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 51 DNLESQAPMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELG-KFPSSSDPAKMAKMQAIL 109
DN + + + AGP+ ++ E DDE + L K S D KMQ ++
Sbjct: 131 DNEKPRIREAAEAGPS-----RRDFPEIQNSDDEQSETALQPKKLSRQDEILRQKMQILV 185
Query: 110 NQFTEDQMNRYESFRRSALQKSNMRRVF 137
F+ +Q+ RYE FRRS+ KS +R++
Sbjct: 186 ANFSAEQLARYECFRRSSFPKSAVRKLI 213
>gi|50289151|ref|XP_447005.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526314|emb|CAG59938.1| unnamed protein product [Candida glabrata]
Length = 364
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 53 LESQAPMSVSAGPAAKMTMSKNKDEYDEE---DDENVDVELGKFPSSSDPAKMAKMQAIL 109
++ + P +S P ++ +D Y++E + E++D L + S PA + + ++
Sbjct: 82 MKKRYPNQISGVPP---NLTFVQDLYEKEMKKESEDIDKSLREMHQPSIPAD-EQFKLLV 137
Query: 110 NQFTEDQMNRYESFRRSALQKSNMRRVFIASLN-SLNL-VRLFMFSVTLLY 158
EDQ NR+E F R+AL K+ ++++ +N S+N +R+F+ ++ ++
Sbjct: 138 TNLDEDQTNRFEVFHRTALSKTQVKKLATTVVNQSINENIRVFLQAIGKIF 188
>gi|308801134|ref|XP_003075348.1| Transcription initiation factor TFIID, subunit TAF11 (ISS)
[Ostreococcus tauri]
gi|116061902|emb|CAL52620.1| Transcription initiation factor TFIID, subunit TAF11 (ISS)
[Ostreococcus tauri]
Length = 140
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 87 DVELGKFPSSSDPAKMAK-------MQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIA 139
D++L + + +D A A+ M +L FT QM RYES+RRS L K +R++F A
Sbjct: 6 DLDLRRRDAETDSATEARRDADRQRMLELLKTFTPSQMERYESYRRSNLSKPMLRKLFRA 65
Query: 140 S 140
+
Sbjct: 66 A 66
>gi|312091852|ref|XP_003147131.1| hypothetical protein LOAG_11565 [Loa loa]
Length = 327
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
KMQ ++ F+ +Q+ RYE FRRS+ KS +R++
Sbjct: 219 KMQILVANFSAEQLARYECFRRSSFPKSAVRKLI 252
>gi|260809315|ref|XP_002599451.1| hypothetical protein BRAFLDRAFT_223882 [Branchiostoma floridae]
gi|229284730|gb|EEN55463.1| hypothetical protein BRAFLDRAFT_223882 [Branchiostoma floridae]
Length = 106
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 25/31 (80%)
Query: 106 QAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
+ ++ F+E+Q+NRYE FRRSA K++++R+
Sbjct: 2 RVLVASFSEEQLNRYEMFRRSAFPKASIKRI 32
>gi|66815969|ref|XP_642001.1| transcription initiation factor TFIID subunit [Dictyostelium
discoideum AX4]
gi|74897247|sp|Q54XM9.1|TAF11_DICDI RecName: Full=Transcription initiation factor TFIID subunit 11
gi|60470042|gb|EAL68023.1| transcription initiation factor TFIID subunit [Dictyostelium
discoideum AX4]
Length = 450
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 28/39 (71%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNS 143
M ++ F+EDQ R+E ++RS+ Q++N+++V + L++
Sbjct: 344 MNTLIKHFSEDQQTRFEYYKRSSFQRANIKKVMQSVLSA 382
>gi|429965188|gb|ELA47185.1| hypothetical protein VCUG_01285 [Vavraia culicis 'floridensis']
Length = 144
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 99 PAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLN 142
P + ++ I++Q +E Q++RYESFRRS K N++++ LN
Sbjct: 35 PQQNIQILQIVDQMSEPQLHRYESFRRSGFLKVNIKKLVNNVLN 78
>gi|357625381|gb|EHJ75845.1| transcription initiation factor TFIID subunit 11 [Danaus plexippus]
Length = 308
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
MQ +++ FTE+Q+ RYE +RR+A K+ ++R+
Sbjct: 189 MQVLVSNFTEEQLGRYEMYRRAAFPKAAVKRL 220
>gi|194223994|ref|XP_001499638.2| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Equus caballus]
Length = 240
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ +M+ +L+ +E+Q NRYE +RRSA ++ MR +
Sbjct: 128 DEEEVQRMKILLSSLSEEQQNRYEMYRRSAFRQETMRSLI 167
>gi|339237351|ref|XP_003380230.1| 60S ribosomal protein L12 [Trichinella spiralis]
gi|316976969|gb|EFV60154.1| 60S ribosomal protein L12 [Trichinella spiralis]
Length = 415
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
KMQ +++ F+++Q++RYE FRRS K +R++
Sbjct: 307 KMQLLVSNFSKEQLSRYEMFRRSVFPKPFIRKII 340
>gi|302773742|ref|XP_002970288.1| hypothetical protein SELMODRAFT_93288 [Selaginella moellendorffii]
gi|300161804|gb|EFJ28418.1| hypothetical protein SELMODRAFT_93288 [Selaginella moellendorffii]
Length = 101
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 109 LNQFTEDQMNRYESFRRSALQKSNMRRV 136
+ +FT DQ++RYE +RRS K+ MRR+
Sbjct: 1 MGRFTADQLDRYEHYRRSGFPKTQMRRL 28
>gi|302793372|ref|XP_002978451.1| hypothetical protein SELMODRAFT_152658 [Selaginella moellendorffii]
gi|300153800|gb|EFJ20437.1| hypothetical protein SELMODRAFT_152658 [Selaginella moellendorffii]
Length = 101
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 109 LNQFTEDQMNRYESFRRSALQKSNMRRV 136
+ +FT DQ++RYE +RRS K+ MRR+
Sbjct: 1 MGRFTADQLDRYEHYRRSGFPKTQMRRL 28
>gi|170573302|ref|XP_001892416.1| zgc:92784 [Brugia malayi]
gi|158602047|gb|EDP38754.1| zgc:92784, putative [Brugia malayi]
Length = 206
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRR 135
KMQ ++ F+ +Q+ RYE FRRS+ KS +R+
Sbjct: 175 KMQILVANFSSEQLARYECFRRSSFPKSAIRK 206
>gi|388582933|gb|EIM23236.1| TAFII28-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 201
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLN 142
+ +L F+ +Q+ RYE +RR+AL K+ +R++ +LN
Sbjct: 100 LGVLLQHFSSEQLQRYEVYRRAALNKNTIRKLCNQTLN 137
>gi|296475693|tpg|DAA17808.1| TPA: TBP-associated factor 11-like [Bos taurus]
Length = 208
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIA 139
KM+ ++ +++Q+NRYE FRRSA KS ++ + A
Sbjct: 103 KMRTLVAAMSKEQLNRYEVFRRSAFPKSTIKHLIQA 138
>gi|431917283|gb|ELK16819.1| Transcription initiation factor TFIID subunit 11 [Pteropus alecto]
Length = 199
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 28/40 (70%)
Query: 98 DPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ KM+ +++ +E+Q+NRYE + RSA ++ ++RV
Sbjct: 87 DEVEVQKMKLLVSSLSEEQLNRYEMYGRSAFRREAVKRVI 126
>gi|19114403|ref|NP_593491.1| transcription factor TFIID complex subunit Taf11 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74665562|sp|Q9US54.1|TAF11_SCHPO RecName: Full=Transcription initiation factor TFIID subunit 11;
AltName: Full=TBP-associated factor 11
gi|6689261|emb|CAB65604.1| transcription factor TFIID complex subunit Taf11 (predicted)
[Schizosaccharomyces pombe]
Length = 199
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 64 GPAAKMTMSKNKDEYD--EEDDEN------VDVELGKFPSSSDPAKMAKMQA--ILNQFT 113
P++K + N+ E + EEDD + + GK P +D K++ +L F
Sbjct: 43 APSSKEKENWNRQEENDLEEDDRDDFGTAAISKVAGK-PGETDDEANEKLRTKYLLESFD 101
Query: 114 EDQMNRYESFRRSALQKSNMRRVFIASLN 142
E+QM RYE FRR+ L K+N++++ LN
Sbjct: 102 EEQMQRYEVFRRANLNKTNVKKLANQILN 130
>gi|440853951|gb|ELR44411.1| hypothetical protein M91_07424, partial [Bos grunniens mutus]
Length = 172
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIA 139
KM+ ++ +++Q+NRYE FRRSA KS ++ + A
Sbjct: 67 KMRTLVAAMSKEQLNRYEVFRRSAFPKSTIKHLIQA 102
>gi|219126064|ref|XP_002183285.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405041|gb|EEC44985.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 192
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 77 EYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
E EEDD+ D+E DPA +A+ QA++ Q Q NR E R A+QK MR +
Sbjct: 14 EVQEEDDDVPDLE----TQGMDPAMLAQAQAMMQQEEFKQQNRNEKKSRKAMQKLGMRAI 69
>gi|156353976|ref|XP_001623181.1| predicted protein [Nematostella vectensis]
gi|156209854|gb|EDO31081.1| predicted protein [Nematostella vectensis]
Length = 108
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 24/29 (82%)
Query: 108 ILNQFTEDQMNRYESFRRSALQKSNMRRV 136
+++ F+EDQ+NRYE +RR+A K+ ++R+
Sbjct: 4 LVSSFSEDQLNRYEMYRRAAFPKAAIKRL 32
>gi|121483810|gb|ABM54199.1| TAF11 [Pan paniscus]
gi|124054114|gb|ABM89243.1| TAF11 [Pongo pygmaeus]
gi|124111096|gb|ABM91924.1| TAF11 [Pan troglodytes]
Length = 104
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 108 ILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 2 LVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 31
>gi|254569710|ref|XP_002491965.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031762|emb|CAY69685.1| Hypothetical protein PAS_chr2-2_0231 [Komagataella pastoris GS115]
gi|328351540|emb|CCA37939.1| Transcription initiation factor TFIID subunit 11 [Komagataella
pastoris CBS 7435]
Length = 281
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 100 AKMAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLNSL--NLVRLFMFSVTLL 157
++ K+ +L F +DQM RYE FRR+ + KS +R+ + L N V L + +V+ +
Sbjct: 124 SRQEKVGLLLENFDQDQMTRYEFFRRANVNKSVAKRIVQSVLGQSINNNVALLVSTVSKM 183
Query: 158 Y 158
+
Sbjct: 184 F 184
>gi|122934847|gb|ABM68162.1| TAF11 [Lagothrix lagotricha]
gi|124013511|gb|ABM88000.1| TAF11 [Macaca nemestrina]
Length = 61
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 108 ILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+++ F+E+Q+NRYE +RRSA K+ ++R+
Sbjct: 2 LVSSFSEEQLNRYEMYRRSAFPKAAIKRLI 31
>gi|393214934|gb|EJD00426.1| TAFII28-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 106
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 109 LNQFTEDQMNRYESFRRSALQKSNMRRVFIASLN 142
++ F+ DQ +RYE++RR+AL K +RRV SL
Sbjct: 1 MDNFSADQYDRYEAYRRNALPKQAVRRVVQQSLG 34
>gi|328768238|gb|EGF78285.1| hypothetical protein BATDEDRAFT_90778 [Batrachochytrium
dendrobatidis JAM81]
Length = 247
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 106 QAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
+A+L+ F +Q+ RYE +RR+ L KS+MR+
Sbjct: 138 KALLDTFNPEQLQRYEVYRRAHLPKSSMRKYL 169
>gi|213407346|ref|XP_002174444.1| transcription initiation factor TFIID subunit 11
[Schizosaccharomyces japonicus yFS275]
gi|212002491|gb|EEB08151.1| transcription initiation factor TFIID subunit 11
[Schizosaccharomyces japonicus yFS275]
Length = 202
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLN 142
K + +L F E QM RYE FRR+ L K+N++++ LN
Sbjct: 95 KTRYLLESFDETQMQRYEVFRRANLNKANVKKLANQILN 133
>gi|299738385|ref|XP_001838323.2| TAF11 [Coprinopsis cinerea okayama7#130]
gi|298403283|gb|EAU83511.2| TAF11 [Coprinopsis cinerea okayama7#130]
Length = 198
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 18/88 (20%)
Query: 65 PAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKM----------QAILNQFTE 114
P ++K ++E D EDD P+ +D A+M + +++ FT
Sbjct: 47 PPGSTVVAKQEEEADGEDD--------LLPAMADDDYSAQMSFQTQSKDNLKVLMDNFTP 98
Query: 115 DQMNRYESFRRSALQKSNMRRVFIASLN 142
+Q +R+E++RR L K +R+V +L
Sbjct: 99 EQYDRFEAYRRHLLPKQAVRKVIQQTLG 126
>gi|50553334|ref|XP_504078.1| YALI0E17809p [Yarrowia lipolytica]
gi|49649947|emb|CAG79671.1| YALI0E17809p [Yarrowia lipolytica CLIB122]
Length = 196
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLN 142
K++ ++ F +QMNRYE FRR+ + + ++++ A LN
Sbjct: 72 KLRILMKNFDTEQMNRYEVFRRANINRPGVKKLANAVLN 110
>gi|449675191|ref|XP_002161376.2| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Hydra magnipapillata]
Length = 156
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 25/32 (78%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRR 135
K+ +++ F+E+Q+NRYE +RR++ K+ ++R
Sbjct: 50 KLSMLVSAFSEEQLNRYEMYRRASFPKAAIKR 81
>gi|401838307|gb|EJT42002.1| VTC3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 837
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 40 AAVTGELEDEFDNLESQAPMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGK-----FP 94
A+V E +D DNLES M P A++ M+ + + + N DVE+GK FP
Sbjct: 234 ASVPNENDDFVDNLESDVRMQ----PEARLNMATKTNSLLSDTNSNEDVEIGKPKSSIFP 289
Query: 95 SSSDPA 100
S DP
Sbjct: 290 QSYDPT 295
>gi|332228691|ref|XP_003263527.1| PREDICTED: LOW QUALITY PROTEIN: talin-1 [Nomascus leucogenys]
Length = 2528
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 36 GSATAAVTGELEDEFDNLESQAPMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPS 95
G+A AVT L + ++++ A + AGPA + YD+ D + V F S
Sbjct: 755 GAAATAVTQALNELLQHVKAHA---IGAGPAGR---------YDQATDTILTVTENIFSS 802
Query: 96 SSDPAKMAKMQAILNQFTEDQMN 118
D +M + IL Q T D +N
Sbjct: 803 MGDAGEMVRQARILAQATSDLVN 825
>gi|260946313|ref|XP_002617454.1| hypothetical protein CLUG_02898 [Clavispora lusitaniae ATCC 42720]
gi|238849308|gb|EEQ38772.1| hypothetical protein CLUG_02898 [Clavispora lusitaniae ATCC 42720]
Length = 231
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 104 KMQAILNQFTEDQMNRYESFRRSALQKSNMRRV 136
K + ++ FTEDQM R+E++RR + K +++V
Sbjct: 77 KRRLLITSFTEDQMERFEAYRRMTVNKPGVKKV 109
>gi|326434262|gb|EGD79832.1| hypothetical protein PTSG_10815 [Salpingoeca sp. ATCC 50818]
Length = 319
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 66 AAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMA-KMQAILNQFTEDQMNRYESFR 124
A + ++++ Y E+DE D EL F +D + A K++ ++ FTE+Q R+ES+R
Sbjct: 178 AERKAFERDEEVYALEEDE--DAELRAF--RNDKERYAEKLKILMASFTEEQRIRHESYR 233
Query: 125 RSALQKSNMRRVFIASLNSL 144
RS +R+V + SL
Sbjct: 234 RSRFDPKVLRKVVGRAHQSL 253
>gi|301618470|ref|XP_002938641.1| PREDICTED: uncharacterized protein C14orf45 homolog [Xenopus
(Silurana) tropicalis]
Length = 471
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 64 GPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFTEDQMNRYESF 123
G KMTM KD +D+E E + V++G ++ K+Q IL+ E +MNR +
Sbjct: 240 GALEKMTMEMEKDAHDKESQELLQVQVGN-------VELQKVQKILH-MKEREMNRIKKL 291
Query: 124 RRSAL-QKSNMRRVFIASL 141
R+ L +++ + F+ +L
Sbjct: 292 ARNILEERTEVEHFFLDAL 310
>gi|432110771|gb|ELK34248.1| Talin-1 [Myotis davidii]
Length = 1024
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
Query: 34 AAGSATAAVTGELEDEFDNLESQAPMSVSAGPAAKMTMSKNKDEYDEEDDENVDVELGKF 93
G+A AVT L D ++ + A AGPA + YD+ D + V F
Sbjct: 766 GVGAAATAVTQALNDLLQHVRAHAS---GAGPAGR---------YDQATDTILTVTENIF 813
Query: 94 PSSSDPAKMAKMQAILNQFTEDQMN 118
S D +M + IL Q T D +N
Sbjct: 814 SSMGDAGEMVRQARILAQATSDLVN 838
>gi|340371725|ref|XP_003384395.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Amphimedon queenslandica]
Length = 160
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 87 DVELGKFPSSSDPAK-----MAKMQAILNQFTEDQMNRYESFRRSALQKSNMRRVF 137
D ++ K P D AK K+Q +++ F+ Q+++YE FRR+ QKS ++++
Sbjct: 32 DDKVEKSPDKDDDAKEEMGQAEKLQLLVSAFSSQQLDQYEIFRRATFQKSTVKKLM 87
>gi|389743713|gb|EIM84897.1| TAFII28-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 213
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 105 MQAILNQFTEDQMNRYESFRRSALQKSNMRRVFIASLN 142
++ +++ FT +Q R+E++RR AL K +R+V +L
Sbjct: 104 LKVLMDSFTPEQYERFEAYRRHALPKQAVRKVIQQTLG 141
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.308 0.124 0.327
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,242,533,152
Number of Sequences: 23463169
Number of extensions: 84646678
Number of successful extensions: 364392
Number of sequences better than 100.0: 627
Number of HSP's better than 100.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 408
Number of HSP's that attempted gapping in prelim test: 363328
Number of HSP's gapped (non-prelim): 1216
length of query: 158
length of database: 8,064,228,071
effective HSP length: 120
effective length of query: 38
effective length of database: 9,543,615,087
effective search space: 362657373306
effective search space used: 362657373306
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 71 (32.0 bits)