BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031513
MTSLASKASQNQYQTLGLLRLSLNFLKSFSTTTSASPSTPSPAPASSSTKPKRRKKKNLF
EVAQFLPNWGIGYHMAKTHWANVSYEITKINLYKDGKHGKAWGIVHKDGLPATDAPRKIS
GVHKRCWRYIPSLSKSVESTPKVTAPKEIAPTAEVQAA

High Scoring Gene Products

Symbol, full name Information P value
AT5G58990 protein from Arabidopsis thaliana 1.1e-37
AT5G52370 protein from Arabidopsis thaliana 1.3e-36

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031513
        (158 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2154603 - symbol:AT5G58990 "AT5G58990" species...   404  1.1e-37   1
TAIR|locus:2156732 - symbol:AT5G52370 "AT5G52370" species...   394  1.3e-36   1


>TAIR|locus:2154603 [details] [associations]
            symbol:AT5G58990 "AT5G58990" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB016885
            UniGene:At.26475 HOGENOM:HOG000083265 ProtClustDB:CLSN2686294
            EMBL:AY054492 EMBL:AY081668 IPI:IPI00528046 RefSeq:NP_200707.1
            UniGene:At.49191 PRIDE:Q9FIL3 EnsemblPlants:AT5G58990.1
            GeneID:836016 KEGG:ath:AT5G58990 TAIR:At5g58990 InParanoid:Q9FIL3
            OMA:LAKSHWA PhylomeDB:Q9FIL3 Genevestigator:Q9FIL3 Uniprot:Q9FIL3
        Length = 148

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 81/145 (55%), Positives = 92/145 (63%)

Query:    14 QTLGLLRLSLNFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFEVAQFLPNWGIGY 73
             +T+G   LSL+ L                               NL EVAQFLPNWGIGY
Sbjct:    14 ETVGAFSLSLSLLRNFSAAPSAASTPASENPSSDSNKPKRRKKKNLIEVAQFLPNWGIGY 73

Query:    74 HMAKTHWANVSYEITKINLYKDGKHGKAWGIVHKDGLPATDAPRKISGVHKRCWRYIPSL 133
             HMAK HW  +SYEITKINLYKDG+HGKAWGIVHKDGL A +AP+KISGVHKRCW+YIP+L
Sbjct:    74 HMAKAHWNGISYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKISGVHKRCWKYIPNL 133

Query:   134 SKSVESTPKVTAPKEIAPTAEVQAA 158
             SK+   TP  T       TA+VQAA
Sbjct:   134 SKT---TPATT-------TADVQAA 148


>TAIR|locus:2156732 [details] [associations]
            symbol:AT5G52370 "AT5G52370" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB019226
            EMBL:AY034962 EMBL:AY062973 IPI:IPI00531469 RefSeq:NP_568770.1
            UniGene:At.26475 EnsemblPlants:AT5G52370.1 GeneID:835313
            KEGG:ath:AT5G52370 TAIR:At5g52370 eggNOG:NOG321093
            HOGENOM:HOG000083265 InParanoid:Q9FHC3 OMA:KSTETAS PhylomeDB:Q9FHC3
            ProtClustDB:CLSN2686294 ArrayExpress:Q9FHC3 Genevestigator:Q9FHC3
            Uniprot:Q9FHC3
        Length = 142

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 75/127 (59%), Positives = 85/127 (66%)

Query:    14 QTLGLLRLSLNFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFEVAQFLPNWGIGY 73
             +T+G  RLSLN L                               NL EVAQFLPNWGIGY
Sbjct:    14 ETVGAFRLSLNLLRNFSAAPASENPSSDSSKPKRRKKK------NLIEVAQFLPNWGIGY 67

Query:    74 HMAKTHWANVSYEITKINLYKDGKHGKAWGIVHKDGLPATDAPRKISGVHKRCWRYIPSL 133
             HMAK HW  +SYEITKINLYKDG+HGKAWGIVHKDGL A +AP+KISGVHKRCW+YIP+L
Sbjct:    68 HMAKAHWNGISYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKISGVHKRCWKYIPNL 127

Query:   134 SKSVEST 140
             SK+  +T
Sbjct:   128 SKTAPAT 134


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      158       127   0.00091  102 3  11 22  0.41    31
                                                     29  0.40    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  136 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.80u 0.12s 10.92t   Elapsed:  00:00:00
  Total cpu time:  10.80u 0.12s 10.92t   Elapsed:  00:00:00
  Start:  Sat May 11 04:55:13 2013   End:  Sat May 11 04:55:13 2013

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