Query 031515
Match_columns 158
No_of_seqs 151 out of 1150
Neff 8.2
Searched_HMMs 29240
Date Tue Mar 26 00:36:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031515.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031515hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 100.0 9.7E-30 3.3E-34 184.1 13.5 110 43-156 39-150 (151)
2 4eld_A MJ16.5-P1, small heat s 100.0 8.3E-30 2.8E-34 186.2 12.6 105 47-156 56-161 (161)
3 3gla_A Low molecular weight he 100.0 1.3E-28 4.4E-33 166.5 13.4 98 45-147 2-99 (100)
4 3aab_A Putative uncharacterize 100.0 6.8E-28 2.3E-32 168.8 10.6 114 23-149 4-119 (123)
5 4fei_A Heat shock protein-rela 99.9 4.4E-27 1.5E-31 159.7 11.4 96 44-149 3-98 (102)
6 3l1e_A Alpha-crystallin A chai 99.9 6.4E-26 2.2E-30 154.9 12.8 97 48-156 3-105 (106)
7 2wj5_A Heat shock protein beta 99.9 9.4E-26 3.2E-30 152.8 11.0 98 48-157 2-100 (101)
8 2klr_A Alpha-crystallin B chai 99.9 9.3E-25 3.2E-29 161.2 9.4 97 49-157 65-163 (175)
9 3q9p_A Heat shock protein beta 99.9 1.7E-23 5.7E-28 137.5 9.9 83 52-146 2-85 (85)
10 2y1y_A Alpha-crystallin B chai 99.9 3.5E-23 1.2E-27 137.3 10.4 86 54-151 3-89 (90)
11 2bol_A TSP36, small heat shock 99.9 8.1E-23 2.8E-27 163.0 13.1 98 45-156 96-198 (314)
12 2bol_A TSP36, small heat shock 99.8 1.5E-20 5.1E-25 149.9 8.1 89 48-145 221-313 (314)
13 2xcm_C SGT1-like protein, cyto 99.1 2.5E-10 8.7E-15 74.9 8.1 82 47-148 2-83 (92)
14 1rl1_A Suppressor of G2 allele 99.1 2.2E-10 7.6E-15 78.3 8.0 83 46-148 8-90 (114)
15 3eud_A Protein SHQ1; CS domain 98.6 2.2E-06 7.6E-11 58.1 12.3 81 44-149 14-99 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.6 2.6E-07 8.8E-12 64.6 7.9 79 46-149 2-85 (134)
17 3igf_A ALL4481 protein; two-do 98.5 5.2E-07 1.8E-11 73.4 8.2 71 48-145 298-369 (374)
18 1x5m_A Calcyclin-binding prote 98.1 7E-05 2.4E-09 51.7 12.0 82 47-148 20-105 (127)
19 1wh0_A Ubiquitin carboxyl-term 98.1 4.4E-05 1.5E-09 53.4 10.0 92 46-148 18-113 (134)
20 1wgv_A KIAA1068 protein; CS do 98.0 8.9E-05 3.1E-09 51.0 10.8 85 43-147 15-102 (124)
21 3qor_A Nuclear migration prote 97.9 0.0002 6.7E-09 49.1 10.4 83 42-147 11-97 (121)
22 1ejf_A Progesterone receptor P 97.8 0.00021 7.1E-09 49.2 9.2 78 49-147 5-82 (125)
23 1wfi_A Nuclear distribution ge 97.8 0.00015 5E-09 50.4 8.4 81 44-147 4-88 (131)
24 2o30_A Nuclear movement protei 97.7 0.00042 1.4E-08 48.0 10.3 76 47-146 4-80 (131)
25 2rh0_A NUDC domain-containing 97.6 0.00057 1.9E-08 48.9 9.0 78 46-147 12-91 (157)
26 2kmw_A Uncharacterized protein 97.5 0.00037 1.3E-08 49.6 7.7 78 47-147 4-82 (150)
27 2cg9_X CO-chaperone protein SB 97.5 4E-05 1.4E-09 53.6 1.8 84 47-146 6-97 (134)
28 3q9p_A Heat shock protein beta 86.5 1.8 6.3E-05 26.9 5.5 34 113-147 8-41 (85)
29 3gla_A Low molecular weight he 81.1 3.5 0.00012 26.2 5.2 34 113-147 15-48 (100)
30 2y1y_A Alpha-crystallin B chai 80.1 3.9 0.00013 25.6 5.1 33 113-146 7-39 (90)
31 3l1e_A Alpha-crystallin A chai 77.4 4.8 0.00016 26.1 5.0 32 113-145 13-44 (106)
32 3aab_A Putative uncharacterize 77.3 6.8 0.00023 25.9 5.9 34 113-147 35-69 (123)
33 2wj5_A Heat shock protein beta 77.2 5.1 0.00018 25.7 5.1 32 114-146 13-44 (101)
34 4eld_A MJ16.5-P1, small heat s 77.1 7.7 0.00026 27.0 6.4 33 114-147 68-100 (161)
35 4fei_A Heat shock protein-rela 76.9 6 0.00021 25.3 5.4 34 112-146 16-49 (102)
36 2nwt_A UPF0165 protein AF_2212 71.9 6.6 0.00023 23.8 4.2 30 127-157 3-32 (69)
37 1gme_A Heat shock protein 16.9 67.2 14 0.00047 25.5 5.7 33 114-147 55-88 (151)
38 2cql_A OK/SW-CL.103, 60S ribos 62.4 20 0.00069 23.1 5.4 18 70-88 20-37 (100)
39 2klr_A Alpha-crystallin B chai 62.2 13 0.00045 26.4 4.9 32 114-146 75-106 (175)
40 1rl6_A Protein (ribosomal prot 60.1 23 0.00079 25.3 5.9 46 70-145 11-56 (177)
41 3qqz_A Putative uncharacterize 58.6 50 0.0017 24.7 7.9 64 64-141 21-86 (255)
42 1nkw_E 50S ribosomal protein L 56.9 29 0.00098 25.6 6.0 46 70-145 39-84 (212)
43 3j21_F 50S ribosomal protein L 51.9 29 0.001 24.9 5.3 44 70-142 14-57 (184)
44 3v2d_H 50S ribosomal protein L 50.7 44 0.0015 23.8 6.1 43 70-142 12-54 (180)
45 1vq8_E 50S ribosomal protein L 48.4 40 0.0014 24.1 5.5 46 70-144 9-54 (178)
46 3u5e_H L8, RP24, YL11, 60S rib 39.8 1E+02 0.0035 22.1 6.9 18 70-88 13-30 (191)
47 2o30_A Nuclear movement protei 39.6 43 0.0015 22.2 4.4 32 112-143 14-45 (131)
48 1ew4_A CYAY protein; friedreic 38.6 16 0.00056 23.8 2.0 17 128-144 29-45 (106)
49 3iz5_F 60S ribosomal protein L 37.5 88 0.003 22.5 5.9 18 70-88 13-30 (190)
50 1q5l_A Chaperone protein DNAK; 36.9 80 0.0027 21.1 5.4 30 128-157 99-131 (135)
51 3oeq_A Frataxin homolog, mitoc 35.1 29 0.00098 23.4 2.8 16 129-144 49-64 (123)
52 2gjh_A Designed protein; oblig 33.4 30 0.001 19.5 2.2 23 69-92 31-53 (62)
53 2zkr_e 60S ribosomal protein L 33.0 83 0.0028 22.6 5.2 23 65-88 8-30 (192)
54 1wgv_A KIAA1068 protein; CS do 29.9 74 0.0025 20.8 4.2 33 111-143 28-61 (124)
55 3bbo_I Ribosomal protein L6; l 29.3 32 0.0011 25.6 2.4 47 70-145 54-100 (223)
56 3r8s_G 50S ribosomal protein L 29.1 36 0.0012 24.3 2.6 42 70-141 11-52 (176)
57 1n91_A ORF, hypothetical prote 28.5 1E+02 0.0034 20.1 4.5 36 52-89 8-44 (108)
58 1ulv_A Glucodextranase; GH fam 25.9 92 0.0032 28.3 5.2 90 49-146 810-915 (1020)
59 3t3l_A Frataxin, mitochondrial 25.8 42 0.0015 22.6 2.4 17 127-143 40-56 (129)
60 1qys_A TOP7; alpha-beta, novel 25.8 59 0.002 20.1 2.8 24 67-91 73-96 (106)
61 1nvp_C Transcription initiatio 25.4 32 0.0011 21.1 1.5 15 126-140 46-60 (76)
62 3lyc_A Putative pectinase; str 25.1 1.1E+02 0.0038 22.2 4.9 28 117-145 40-67 (241)
63 2hyk_A Beta-1,3-glucanase; fam 22.3 81 0.0028 23.0 3.6 44 76-123 53-99 (245)
64 3dqg_A Heat shock 70 kDa prote 21.6 1.9E+02 0.0067 19.5 6.5 30 127-156 81-113 (151)
65 3dob_A Heat shock 70 kDa prote 21.5 2E+02 0.0067 19.5 5.7 30 127-156 81-113 (152)
66 3d33_A Domain of unknown funct 21.3 1.7E+02 0.006 18.9 5.2 26 115-145 22-47 (108)
67 3h0x_A 78 kDa glucose-regulate 21.0 2E+02 0.0069 19.4 6.0 30 127-156 81-113 (152)
68 2rh0_A NUDC domain-containing 20.8 2.1E+02 0.0071 19.5 6.4 33 111-143 22-54 (157)
69 1nh2_C Transcription initiatio 20.3 46 0.0016 20.6 1.5 15 126-140 48-62 (79)
70 2op6_A Heat shock 70 kDa prote 20.1 2E+02 0.0069 19.2 5.1 29 128-156 82-113 (152)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.97 E-value=9.7e-30 Score=184.08 Aligned_cols=110 Identities=45% Similarity=0.687 Sum_probs=98.0
Q ss_pred ccCCCCceeEEEeCCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCC
Q 031515 43 KAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPD 122 (158)
Q Consensus 43 ~~~~~p~~~i~e~~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~ 122 (158)
...+.|+++|+|++++|+|.++|||+++++|+|++.+|+.|+|+|++.... +.++..|+++|+.+|.|.|+|.||.
T Consensus 39 ~~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~----~~~~~~~~~~Er~~g~F~R~~~LP~ 114 (151)
T 1gme_A 39 AAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEK----EDKNDKWHRVERSSGKFVRRFRLLE 114 (151)
T ss_dssp HHHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCC----CCTTCEEEECCCCCCCEEEEEECSS
T ss_pred ccccCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEcccc----ccCCceEEEEeEeccEEEEEEECCC
Confidence 445679999999999999999999999999999996468999999988766 4567899999999999999999999
Q ss_pred CcccCCeeEEEeCCEEEEEEecCCCCCC--ceEEEe
Q 031515 123 NANVEKISALCQDGVLIVTVEKVPPPQP--KTIQVQ 156 (158)
Q Consensus 123 ~vd~~~i~A~~~nGvL~I~~pk~~~~~~--~~I~I~ 156 (158)
+||.++|+|+|+||+|+|++||.+..++ ++|+|+
T Consensus 115 ~vd~~~i~A~~~nGvL~I~lPK~~~~~~~~~~I~I~ 150 (151)
T 1gme_A 115 DAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQIS 150 (151)
T ss_dssp CCCGGGCEEEEETTEEEEEEECCCCCTTCCCCCCCC
T ss_pred CccccceEEEEECCEEEEEEEccCcCCCCCeEeeeC
Confidence 9999999999999999999999987665 555553
No 2
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.97 E-value=8.3e-30 Score=186.20 Aligned_cols=105 Identities=20% Similarity=0.290 Sum_probs=96.7
Q ss_pred CCceeEEEeCCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEee-ecceEEEEEECCCCcc
Q 031515 47 ATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMER-RFGKFMRKFVLPDNAN 125 (158)
Q Consensus 47 ~p~~~i~e~~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~-~~~~f~r~~~LP~~vd 125 (158)
.++++|+|++++|+|+++|||+++++|+|++++ +.|+|+|++.... ..++.+|+++|+ .+|.|.|+|.||.+||
T Consensus 56 ~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~~~----~~~~~~~~~~Er~~~g~f~R~~~LP~~vd 130 (161)
T 4eld_A 56 FMPISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSPLM----ITESERIIYSEIPEEEEIYRTIKLPATVK 130 (161)
T ss_dssp CCCEEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCCCC----CCSSCEEEEECSCCCCEEEEEEECSSCBC
T ss_pred ccceeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEcccc----cCCCceEEEEEeeccccEEEEEECCCCcc
Confidence 445999999999999999999999999999994 8999999988765 445678999999 9999999999999999
Q ss_pred cCCeeEEEeCCEEEEEEecCCCCCCceEEEe
Q 031515 126 VEKISALCQDGVLIVTVEKVPPPQPKTIQVQ 156 (158)
Q Consensus 126 ~~~i~A~~~nGvL~I~~pk~~~~~~~~I~I~ 156 (158)
.++|+|+|+||+|+|++||.+..++++|+|+
T Consensus 131 ~~~i~A~~~nGvL~I~lpK~~~~~~r~I~Ie 161 (161)
T 4eld_A 131 EENASAKFENGVLSVILPKAESSIKKGINIE 161 (161)
T ss_dssp GGGCEEEEETTEEEEEEEBCGGGSCCCCCCC
T ss_pred cccEEEEEECCEEEEEEEcCCCCCCcEeecC
Confidence 9999999999999999999998888999885
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.96 E-value=1.3e-28 Score=166.51 Aligned_cols=98 Identities=37% Similarity=0.708 Sum_probs=90.4
Q ss_pred CCCCceeEEEeCCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCc
Q 031515 45 MAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNA 124 (158)
Q Consensus 45 ~~~p~~~i~e~~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~v 124 (158)
.+.|+++|.+++++|+|.++|||+++++|+|+++ ++.|+|+|++.... ..++..|+++|+.+|.|.|+|.||.+|
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~-~~~L~I~g~~~~~~----~~~~~~~~~~er~~g~f~r~~~LP~~v 76 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMD-KGILSIRGERKSES----STETERFSRIERRYGSFHRRFALPDSA 76 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEE-TTEEEEEEEECCGG----GSSGGGEEEECCCCEEEEEEEECCTTB
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEE-CCEEEEEEEEcCcC----ccCCccEEEEeecceEEEEEEECCCCc
Confidence 4679999999999999999999999999999999 58999999998766 456788999999999999999999999
Q ss_pred ccCCeeEEEeCCEEEEEEecCCC
Q 031515 125 NVEKISALCQDGVLIVTVEKVPP 147 (158)
Q Consensus 125 d~~~i~A~~~nGvL~I~~pk~~~ 147 (158)
|.++|+|+|+||+|+|++||.+.
T Consensus 77 d~~~i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 77 DADGITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CTTSCEEEEETTEEEEEEEBC--
T ss_pred ChHHeEEEEeCCEEEEEEecCCC
Confidence 99999999999999999999875
No 4
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.95 E-value=6.8e-28 Score=168.78 Aligned_cols=114 Identities=23% Similarity=0.293 Sum_probs=90.6
Q ss_pred chHHhhhhcCCCccccccccccCCCCceeEEEeCCEEEEEEEcCCCCCCCeEEEEeeC-cEEEEEEEEecCCCCcCCCCC
Q 031515 23 LPEEQENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESE-NVLVVSGERKRDPKEKDNKDG 101 (158)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~e~~d~~~i~~~lPG~~~~~i~v~v~d~-~~L~I~g~~~~~~~~~~~~~~ 101 (158)
++++|.+.|.+..+.+. ..+.|+++|.+++++|+|.++|||+++++|+|++. + +.|+|+|++.... +
T Consensus 4 ~~~em~~~~~~~~~~~~----~~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~-~~~~L~I~g~~~~~~-------~ 71 (123)
T 3aab_A 4 LGKELQKRSEELSRGFY----ELVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVS-GQNELIIEAEREITE-------P 71 (123)
T ss_dssp ----------CCCHHHH----HHHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEE-TTTEEEEEEECCCCC-------C
T ss_pred HHHHHHHHHHHHhhhcc----ccCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEe-CCCEEEEEEEEeccC-------C
Confidence 44455555555444432 23459999999999999999999999999999999 5 8999999976432 5
Q ss_pred ceEEEEeeecceEEEEEECCCCcccCCe-eEEEeCCEEEEEEecCCCCC
Q 031515 102 VKYVRMERRFGKFMRKFVLPDNANVEKI-SALCQDGVLIVTVEKVPPPQ 149 (158)
Q Consensus 102 ~~~~~~e~~~~~f~r~~~LP~~vd~~~i-~A~~~nGvL~I~~pk~~~~~ 149 (158)
.+|+++|+.+ .|.|+|.||.+||.++| +|.|+||+|+|++||.+..+
T Consensus 72 ~~~~~~Er~~-~f~R~~~LP~~vd~~~i~~A~~~~GvL~I~lPK~~~~~ 119 (123)
T 3aab_A 72 GVKYLTQRPK-YVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIAGTSV 119 (123)
T ss_dssp SCEEEECSCS-EEEEEEECSSEECTTCCCEEEEETTEEEEEEEGGGEEC
T ss_pred CeEEEEEEeE-EEEEEEECCCCcCcchhCeeEEcCCEEEEEEEcCCCCc
Confidence 7899999999 99999999999999999 99999999999999987654
No 5
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.95 E-value=4.4e-27 Score=159.65 Aligned_cols=96 Identities=28% Similarity=0.415 Sum_probs=87.6
Q ss_pred cCCCCceeEEEeCCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCC
Q 031515 44 AMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDN 123 (158)
Q Consensus 44 ~~~~p~~~i~e~~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~ 123 (158)
+.+.|+++|.++++.|+|.++|||+++++|+|+++ ++.|+|+|++.. +.+|+++|+.+|.|.|+|.||.+
T Consensus 3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~-~~~L~I~g~~~~---------~~~~~~~er~~g~f~R~~~LP~~ 72 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAED-GGQLTVSGERPG---------TEHLLRSERPSGRFVRELAFPEP 72 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEE-TTEEEEEEEECC---------CSSCSSCCSEEEEEEEEEECSSC
T ss_pred CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEE-CCEEEEEEEEec---------CCCEEEEEEeccEEEEEEECCCC
Confidence 45779999999999999999999999999999999 589999999742 24677889999999999999999
Q ss_pred cccCCeeEEEeCCEEEEEEecCCCCC
Q 031515 124 ANVEKISALCQDGVLIVTVEKVPPPQ 149 (158)
Q Consensus 124 vd~~~i~A~~~nGvL~I~~pk~~~~~ 149 (158)
||.++|+|+|+||+|+|++||.++..
T Consensus 73 vd~~~i~A~~~~GvL~I~lpK~~~~~ 98 (102)
T 4fei_A 73 VRPASGVASLAGGVLTVRFEKLRPTI 98 (102)
T ss_dssp BCTTCCEEEEETTEEEEEEEBSSCCC
T ss_pred cchhHcEEEEECCEEEEEEEccCccc
Confidence 99999999999999999999988653
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.94 E-value=6.4e-26 Score=154.95 Aligned_cols=97 Identities=23% Similarity=0.460 Sum_probs=84.7
Q ss_pred CceeEEEeCCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccC
Q 031515 48 TPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVE 127 (158)
Q Consensus 48 p~~~i~e~~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~ 127 (158)
+..+|++++++|.|.++|||+++++|+|++.+ +.|+|+|++.... ++..|++++ |.|+|.||.+||.+
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~------~~~~~~~~e-----F~R~~~LP~~vd~~ 70 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNERQ------DDHGYISRE-----FHRRYRLPSNVDQS 70 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEE------TTTEEEEEE-----EEEEEECCTTBCTT
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcccc------CCCCEEEEE-----EEEEEECCCCcChh
Confidence 45799999999999999999999999999995 8999999976443 234566543 99999999999999
Q ss_pred CeeEEE-eCCEEEEEEecCCCC-----CCceEEEe
Q 031515 128 KISALC-QDGVLIVTVEKVPPP-----QPKTIQVQ 156 (158)
Q Consensus 128 ~i~A~~-~nGvL~I~~pk~~~~-----~~~~I~I~ 156 (158)
+|+|.| +||+|+|++||.++. ++|+|+|+
T Consensus 71 ~i~A~~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 71 ALSCSLSADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp SCEEEECTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred HcEEEECCCCEEEEEEEccCcccccCCCCeEeeec
Confidence 999999 899999999999876 45889885
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.93 E-value=9.4e-26 Score=152.83 Aligned_cols=98 Identities=19% Similarity=0.346 Sum_probs=84.0
Q ss_pred CceeEEEeCCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccC
Q 031515 48 TPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVE 127 (158)
Q Consensus 48 p~~~i~e~~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~ 127 (158)
..+||++++++|.|.++|||+++++|+|++.+ +.|+|+|++.... ++..|+++| |.|+|.||.+||.+
T Consensus 2 ~~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~------~~~~~~~~e-----F~R~~~LP~~vd~~ 69 (101)
T 2wj5_A 2 AMAQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHEERP------DEHGFIARE-----FHRRYRLPPGVDPA 69 (101)
T ss_dssp CCCCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEECS------STTCCEEEE-----EEEEEECCTTBCTT
T ss_pred CcEEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc------CCCCEEEEE-----EEEEEECCCCcChh
Confidence 35799999999999999999999999999994 8999999987544 334566555 99999999999999
Q ss_pred CeeEEE-eCCEEEEEEecCCCCCCceEEEee
Q 031515 128 KISALC-QDGVLIVTVEKVPPPQPKTIQVQV 157 (158)
Q Consensus 128 ~i~A~~-~nGvL~I~~pk~~~~~~~~I~I~~ 157 (158)
+|+|+| +||+|+|++||.+..+++.++|.+
T Consensus 70 ~i~A~~s~nGvL~I~lPK~~~~~~~~~~i~~ 100 (101)
T 2wj5_A 70 AVTSALSPEGVLSIQATPASAQASLPSPPAA 100 (101)
T ss_dssp CCEEEECTTSEEEEEECBCCCCCSSCC----
T ss_pred HCEEEECCCCEEEEEEECCCcCCCCCCcccc
Confidence 999999 899999999999998888888754
No 8
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.91 E-value=9.3e-25 Score=161.24 Aligned_cols=97 Identities=24% Similarity=0.401 Sum_probs=73.2
Q ss_pred ceeEEEeCCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCC
Q 031515 49 PADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEK 128 (158)
Q Consensus 49 ~~~i~e~~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~ 128 (158)
.++|.+++++|.|.++|||+++++|+|++.+ +.|+|+|++.... ++.+|+++| |.|+|.||.+||.++
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~------~~~~~~~re-----F~R~~~LP~~Vd~~~ 132 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQ------DEHGFISRE-----FHRKYRIPADVDPLT 132 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEEEEE------ETTEEEEEE-----EEEEEECTTTCCTTT
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcccc------cCCceEEEE-----EEEEEECCCCcChhH
Confidence 4799999999999999999999999999995 8999999986543 345676654 999999999999999
Q ss_pred eeEEE-eCCEEEEEEecCCCCCC-ceEEEee
Q 031515 129 ISALC-QDGVLIVTVEKVPPPQP-KTIQVQV 157 (158)
Q Consensus 129 i~A~~-~nGvL~I~~pk~~~~~~-~~I~I~~ 157 (158)
|+|+| +||+|+|++||.+..++ ++|+|+.
T Consensus 133 i~A~~s~dGvL~I~lPK~~~~~~~r~I~I~~ 163 (175)
T 2klr_A 133 ITSSLSSDGVLTVNGPRKQVSGPERTIPITR 163 (175)
T ss_dssp CEEEECTTSCEEEEEECC-------------
T ss_pred eEEEEcCCCEEEEEEECCCCCCCCeEEEEec
Confidence 99999 79999999999876554 8999875
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.90 E-value=1.7e-23 Score=137.54 Aligned_cols=83 Identities=18% Similarity=0.314 Sum_probs=69.1
Q ss_pred EEEeCCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeeE
Q 031515 52 VVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISA 131 (158)
Q Consensus 52 i~e~~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A 131 (158)
+.|++++|.|.++|||+++++|+|++.+ +.|+|+|++.... . +..| ..++|.|+|.||.+||.++|+|
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~----~--~~~~-----~~~~F~R~~~LP~~vd~~~i~A 69 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAARQ----D--EHGY-----ISRCFTRKYTLPPGVDPTQVSS 69 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC-------------C-----CCEEEEEEEECCTTCCGGGCEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcccc----C--CCCE-----EEEEEEEEEECCCCcChHHcEE
Confidence 3578999999999999999999999995 8999999987654 1 1222 3578999999999999999999
Q ss_pred EEe-CCEEEEEEecCC
Q 031515 132 LCQ-DGVLIVTVEKVP 146 (158)
Q Consensus 132 ~~~-nGvL~I~~pk~~ 146 (158)
.|+ ||+|+|++||.+
T Consensus 70 ~~~~~GvL~I~lPK~k 85 (85)
T 3q9p_A 70 SLSPEGTLTVEAPMPK 85 (85)
T ss_dssp EECTTSEEEEEEECCC
T ss_pred EECCCCEEEEEEEcCC
Confidence 998 999999999963
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.90 E-value=3.5e-23 Score=137.35 Aligned_cols=86 Identities=24% Similarity=0.419 Sum_probs=69.1
Q ss_pred EeCCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeeEEE
Q 031515 54 EYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALC 133 (158)
Q Consensus 54 e~~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~ 133 (158)
+++++|+|.++|||+++++|+|++.+ +.|+|+|++.... ++..|++++ |.|+|.||.+||.++|+|.|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~------~~~~~~~~e-----f~R~~~LP~~vd~~~i~A~~ 70 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQ------DEHGFISRE-----FHRKYRIPADVDPLTITSSM 70 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEE------CSSSEEEEE-----EEEEEECCTTBCGGGCEEEE
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc------CCCCEEEEE-----EEEEEECCCCcChhHcEEEE
Confidence 57889999999999999999999994 8999999987543 345566554 99999999999999999999
Q ss_pred -eCCEEEEEEecCCCCCCc
Q 031515 134 -QDGVLIVTVEKVPPPQPK 151 (158)
Q Consensus 134 -~nGvL~I~~pk~~~~~~~ 151 (158)
+||+|+|++||.+.++++
T Consensus 71 ~~~GvL~I~~pK~~~~~p~ 89 (90)
T 2y1y_A 71 SSDGVLTVNGPRKQVSGPE 89 (90)
T ss_dssp CTTSEEEEEECBC------
T ss_pred CCCCEEEEEEEcCCCCCCC
Confidence 899999999999877654
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.89 E-value=8.1e-23 Score=162.98 Aligned_cols=98 Identities=21% Similarity=0.273 Sum_probs=84.9
Q ss_pred CCCCceeEEEeCC----EEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEEC
Q 031515 45 MAATPADVVEYPN----SYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVL 120 (158)
Q Consensus 45 ~~~p~~~i~e~~d----~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~L 120 (158)
.+.|++||+|+++ +|.|.++|||+++++|+|++.+ +.|+|+|++.... +++ +.+|.|.|+|.|
T Consensus 96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~~~------e~~------r~~g~F~R~~~L 162 (314)
T 2bol_A 96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQKSVAC------GDA------AMSESVGRSIPL 162 (314)
T ss_dssp TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEEECCBSST------TCC------CBCCCEEEEEEC
T ss_pred cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEEEEEeccC------CCC------EEEEEEEEEEEC
Confidence 3568999999999 9999999999999999999995 8999999987443 111 668999999999
Q ss_pred CCCcccCCeeEEEe-CCEEEEEEecCCCCCCceEEEe
Q 031515 121 PDNANVEKISALCQ-DGVLIVTVEKVPPPQPKTIQVQ 156 (158)
Q Consensus 121 P~~vd~~~i~A~~~-nGvL~I~~pk~~~~~~~~I~I~ 156 (158)
|.+||.++|+|+|+ ||+|+|++||.++.. +.|+|+
T Consensus 163 P~~Vd~e~i~A~~~~nGVL~I~lPK~~~~~-~~I~it 198 (314)
T 2bol_A 163 PPSVDRNHIQATITTDDVLVIEAPVNEPNY-KAIKLS 198 (314)
T ss_dssp CTTBCGGGCEEEECSSSEEEEEEEBSSCCT-TTEEEE
T ss_pred CCCccccccEEEEeCCCEEEEEEeccCccc-ceeecc
Confidence 99999999999999 999999999988653 445543
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.82 E-value=1.5e-20 Score=149.91 Aligned_cols=89 Identities=18% Similarity=0.308 Sum_probs=70.7
Q ss_pred CceeEEEeC---CEEEEEEEc-CCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCC
Q 031515 48 TPADVVEYP---NSYVFVVDM-PGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDN 123 (158)
Q Consensus 48 p~~~i~e~~---d~~~i~~~l-PG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~ 123 (158)
..++|.+++ +.|.|.++| ||+++++|+|++++ +.|+|+|+++... + .++++|+.+|.|+|+|.||++
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~~~----~----~~~~~Er~~g~F~R~~~LP~~ 291 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGKEE----K----TENASHSEHREFYKAFVTPEV 291 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC--------------------CEEEEEEEECSSE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEeccC----C----ceEEEEEeeeEEEEEEECCCC
Confidence 346777755 489999999 99999999999994 8999999987654 1 468889999999999999999
Q ss_pred cccCCeeEEEeCCEEEEEEecC
Q 031515 124 ANVEKISALCQDGVLIVTVEKV 145 (158)
Q Consensus 124 vd~~~i~A~~~nGvL~I~~pk~ 145 (158)
||.++|+|+|+||+|+|++||.
T Consensus 292 vd~~~i~A~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 292 VDASKTQAEIVDGLMVVEAPLF 313 (314)
T ss_dssp ECGGGCEEEEETTEEEEEEEEE
T ss_pred cChHHeEEEEeCCEEEEEEecC
Confidence 9999999999999999999996
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.12 E-value=2.5e-10 Score=74.90 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=71.4
Q ss_pred CCceeEEEeCCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCccc
Q 031515 47 ATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANV 126 (158)
Q Consensus 47 ~p~~~i~e~~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~ 126 (158)
.|++++.++.+.+.|.+.+||+.++++.|.+.+ +.|.|++... . ...|...+.|+..|++
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~--~-----------------~~~y~~~~~L~~~I~~ 61 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEVP--G-----------------EDAYYLQPRLFGKIIP 61 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECCT--T-----------------SCCEEECCBBSSCBCG
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEcC--C-----------------CcEEEEeeEcCCccCc
Confidence 478999999999999999999999999999995 8999997532 1 1237788999999999
Q ss_pred CCeeEEEeCCEEEEEEecCCCC
Q 031515 127 EKISALCQDGVLIVTVEKVPPP 148 (158)
Q Consensus 127 ~~i~A~~~nGvL~I~~pk~~~~ 148 (158)
++.++++.+|.|.|+|+|.++.
T Consensus 62 ~~s~~~~~~~~l~i~L~K~~~~ 83 (92)
T 2xcm_C 62 DKCKYEVLSTKIEICLAKADII 83 (92)
T ss_dssp GGCEEEECSSCEEEEEEBSSSC
T ss_pred hhEEEEEECCEEEEEEEcCCCC
Confidence 9999999999999999998754
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.12 E-value=2.2e-10 Score=78.27 Aligned_cols=83 Identities=10% Similarity=0.052 Sum_probs=72.1
Q ss_pred CCCceeEEEeCCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcc
Q 031515 46 AATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNAN 125 (158)
Q Consensus 46 ~~p~~~i~e~~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd 125 (158)
..|++++.++.+.+.|.+.+||+.++++.|.+.+ +.|.|++... . ...|...+.|+..|+
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~--~-----------------~~~y~~~~~L~~~I~ 67 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLP--S-----------------GEDYNLKLELLHPII 67 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECT--T-----------------SSEEEEEECBSSCCC
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeC--C-----------------CcEEEEEeeCCCcCC
Confidence 4577999999999999999999999999999995 7899997632 1 113778899999999
Q ss_pred cCCeeEEEeCCEEEEEEecCCCC
Q 031515 126 VEKISALCQDGVLIVTVEKVPPP 148 (158)
Q Consensus 126 ~~~i~A~~~nGvL~I~~pk~~~~ 148 (158)
++..++.+.+|.|+|+|+|.+..
T Consensus 68 ~e~s~~~~~~~~l~i~L~K~~~~ 90 (114)
T 1rl1_A 68 PEQSTFKVLSTKIEIKLKKPEAV 90 (114)
T ss_dssp GGGEEEEECSSSEEEEEECSSCC
T ss_pred ccccEEEEECCEEEEEEEcCCCC
Confidence 99999999999999999998753
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.57 E-value=2.2e-06 Score=58.06 Aligned_cols=81 Identities=15% Similarity=0.274 Sum_probs=69.2
Q ss_pred cCCCCceeEEEeCCEEEEEEEcCCCC--CCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECC
Q 031515 44 AMAATPADVVEYPNSYVFVVDMPGIK--ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLP 121 (158)
Q Consensus 44 ~~~~p~~~i~e~~d~~~i~~~lPG~~--~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP 121 (158)
.+..|...|.++++.++|.+.+|.+. ..++++.++ |+.+....+ .|.-++.||
T Consensus 14 ~~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd-~~~F~F~~~------------------------PYyLRL~lP 68 (115)
T 3eud_A 14 KMITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQ-ENMIIFHLS------------------------PYYLRLRFP 68 (115)
T ss_dssp CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEE-TTEEEEEET------------------------TEEEEEECS
T ss_pred CEeCCcEEEEECCCEEEEEEEcCceecccCccEEEEe-CCEEEEecC------------------------CeEEEEecC
Confidence 45679999999999999999999877 789999999 688888732 266789999
Q ss_pred CCc-ccCCeeEEEe--CCEEEEEEecCCCCC
Q 031515 122 DNA-NVEKISALCQ--DGVLIVTVEKVPPPQ 149 (158)
Q Consensus 122 ~~v-d~~~i~A~~~--nGvL~I~~pk~~~~~ 149 (158)
..+ +.+.-+|+|+ +|.++|++||..+.+
T Consensus 69 ~~vved~~~~A~YD~d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 69 HELIDDERSTAQYDSKDECINVKVAKLNKNE 99 (115)
T ss_dssp SCEECSTTCEEEEETTTTEEEEEEEESSTTC
T ss_pred cceecCCCcceEEeCCCcEEEEEEcCCcCCC
Confidence 998 6677899996 999999999997654
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.56 E-value=2.6e-07 Score=64.61 Aligned_cols=79 Identities=14% Similarity=0.266 Sum_probs=68.1
Q ss_pred CCCceeEEEeCCEEEEEEEcCCCC--CCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCC
Q 031515 46 AATPADVVEYPNSYVFVVDMPGIK--ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDN 123 (158)
Q Consensus 46 ~~p~~~i~e~~d~~~i~~~lPG~~--~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~ 123 (158)
..|...+.++++.++|.+.+|... .+++++.++ |..+.... ..|.-++.||..
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~-~~~F~F~~------------------------~PYyLRL~LP~~ 56 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQ-ENMIIFHL------------------------SPYYLRLRFPHE 56 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEEC-SSSEEECS------------------------SSSCEEECCSSC
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEe-CCEEEEec------------------------CCeEEEecCCCe
Confidence 358889999999999999999999 899999999 57888772 226667999999
Q ss_pred c-ccCCeeEEEe--CCEEEEEEecCCCCC
Q 031515 124 A-NVEKISALCQ--DGVLIVTVEKVPPPQ 149 (158)
Q Consensus 124 v-d~~~i~A~~~--nGvL~I~~pk~~~~~ 149 (158)
| +.+..+|+|+ .|.|+|++||..+.+
T Consensus 57 V~e~~~~kA~YD~d~~~~~VtLpK~~~Ge 85 (134)
T 2k8q_A 57 LIDDERSTAQYDSKDECINVKVAKLNKNE 85 (134)
T ss_dssp EECCSSCEEEEETTTTEEEEEEEESSTTC
T ss_pred eecCCCcceeEeccCCEEEEEEeCCCCCC
Confidence 9 8888999996 899999999987653
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.45 E-value=5.2e-07 Score=73.42 Aligned_cols=71 Identities=20% Similarity=0.258 Sum_probs=61.4
Q ss_pred CceeEEEeCCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccC
Q 031515 48 TPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVE 127 (158)
Q Consensus 48 p~~~i~e~~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~ 127 (158)
+++.|... .|.+++.|||+++++|++... |..|+|+ .|.|+|.+.||..+...
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~-gdeL~v~------------------------~g~~rR~i~LP~~L~~~ 350 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQY-GPEVTVE------------------------AGDQRRNIFLPPALSGR 350 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEE-TTEEEEE------------------------ETTEEEEEECCTTTTTC
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEE-CCeEEEE------------------------ECCEeecccCCHHHcCC
Confidence 45555433 899999999999999999999 7999999 67799999999998777
Q ss_pred Ce-eEEEeCCEEEEEEecC
Q 031515 128 KI-SALCQDGVLIVTVEKV 145 (158)
Q Consensus 128 ~i-~A~~~nGvL~I~~pk~ 145 (158)
.+ .|.|+||.|+|.+-..
T Consensus 351 ~v~~A~~~~~~L~i~~~~~ 369 (374)
T 3igf_A 351 PITGAKFQNNYLIISFLEH 369 (374)
T ss_dssp CEEEEEEETTEEEEEECCC
T ss_pred CccccEEECCEEEEEEehh
Confidence 76 7999999999998654
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.13 E-value=7e-05 Score=51.74 Aligned_cols=82 Identities=10% Similarity=0.099 Sum_probs=68.0
Q ss_pred CCceeEEEeCCEEEEEEEcCCC---CCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEE-CCC
Q 031515 47 ATPADVVEYPNSYVFVVDMPGI---KASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFV-LPD 122 (158)
Q Consensus 47 ~p~~~i~e~~d~~~i~~~lPG~---~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~-LP~ 122 (158)
.+.+++.++.+.+.|.+.+||+ .++++.|.+.. +.|.|.+... .+. .|.-.+. |-.
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~---------~~~----------~y~~~~~~L~~ 79 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNL---------NGK----------SYSMIVNNLLK 79 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSC---------SSS----------CEEEEEECBSS
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcC---------CCC----------cEEEEhHHhcC
Confidence 3578999999999999999999 88999999995 8999986421 111 2666785 999
Q ss_pred CcccCCeeEEEeCCEEEEEEecCCCC
Q 031515 123 NANVEKISALCQDGVLIVTVEKVPPP 148 (158)
Q Consensus 123 ~vd~~~i~A~~~nGvL~I~~pk~~~~ 148 (158)
.|++++-+.....+.+.|+|.|....
T Consensus 80 ~I~~e~S~~~v~~~kVei~L~K~~~~ 105 (127)
T 1x5m_A 80 PISVEGSSKKVKTDTVLILCRKKVEN 105 (127)
T ss_dssp CCCTTTCEEEEETTEEEEEEECSSSS
T ss_pred ccCcccCEEEEeCCEEEEEEEECCCC
Confidence 99999988889999999999998753
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.06 E-value=4.4e-05 Score=53.41 Aligned_cols=92 Identities=16% Similarity=0.163 Sum_probs=69.9
Q ss_pred CCCceeEEEe-CCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecc---eEEEEEECC
Q 031515 46 AATPADVVEY-PNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFG---KFMRKFVLP 121 (158)
Q Consensus 46 ~~p~~~i~e~-~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~---~f~r~~~LP 121 (158)
..++++++++ .+.+.|.+.++++.++++.|.+.+ +.|.|+...... . ..+.-...| .|.-.+.|-
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~~---------~-~l~~~~a~g~~~~y~~~~~L~ 86 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRDG---------N-FLRLHPGCGPHTTFRWQVKLR 86 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCCH---------H-HHHHSTTCCTTSCEEEEEEBS
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCCC---------c-ccccccccCcceeEEEecccc
Confidence 3578999999 999999999999999999999995 899998643210 0 000000001 367778899
Q ss_pred CCcccCCeeEEEeCCEEEEEEecCCCC
Q 031515 122 DNANVEKISALCQDGVLIVTVEKVPPP 148 (158)
Q Consensus 122 ~~vd~~~i~A~~~nGvL~I~~pk~~~~ 148 (158)
..|++++-+.....+.+.|+|.|.+..
T Consensus 87 ~~I~pe~S~~~v~~~kIeI~L~K~e~~ 113 (134)
T 1wh0_A 87 NLIEPEQCTFCFTASRIDICLRKRQSQ 113 (134)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEESSSC
T ss_pred ccCCchhCEEEEeCCEEEEEEEECCCC
Confidence 999999888888899999999998643
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=98.02 E-value=8.9e-05 Score=51.00 Aligned_cols=85 Identities=16% Similarity=0.172 Sum_probs=68.1
Q ss_pred ccCCCCceeEEEeCCEEEEEEEcC-CC-CCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEEC
Q 031515 43 KAMAATPADVVEYPNSYVFVVDMP-GI-KASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVL 120 (158)
Q Consensus 43 ~~~~~p~~~i~e~~d~~~i~~~lP-G~-~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~L 120 (158)
.+...|.+.+.++.+...|++.|| |+ +.+++.|.+.. +.|.|.++.. .+.. +.-...|
T Consensus 15 nG~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~---------~~~~----------~~~~~~L 74 (124)
T 1wgv_A 15 NGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEE---------NGER----------VLMEGKL 74 (124)
T ss_dssp SSBCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECS---------SSEE----------EEEEEEB
T ss_pred CCCcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEcc---------CCCc----------eEEcccc
Confidence 344568899999999999999999 88 89999999995 8999986521 1111 2245789
Q ss_pred CCCcccCCeeEEEeCCE-EEEEEecCCC
Q 031515 121 PDNANVEKISALCQDGV-LIVTVEKVPP 147 (158)
Q Consensus 121 P~~vd~~~i~A~~~nGv-L~I~~pk~~~ 147 (158)
...|+++.-+..+.++. |.|+|-|...
T Consensus 75 ~~~I~~e~S~w~i~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 75 THKINTESSLWSLEPGKCVLVNLSKVGE 102 (124)
T ss_dssp SSCBCTTTCEEEECTTSEEEEEECBSSS
T ss_pred cCcCCCcCCEEEEeCCCEEEEEEEECCC
Confidence 99999999999998875 9999999864
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.88 E-value=0.0002 Score=49.13 Aligned_cols=83 Identities=20% Similarity=0.219 Sum_probs=66.8
Q ss_pred cccCCCCceeEEEeCCEEEEEEEcC-C--CCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEE
Q 031515 42 AKAMAATPADVVEYPNSYVFVVDMP-G--IKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKF 118 (158)
Q Consensus 42 ~~~~~~p~~~i~e~~d~~~i~~~lP-G--~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~ 118 (158)
..+...|.+.+.++.+.+.|++.|| | ++.+++.|.+.. +.|.|..+.. . +.-..
T Consensus 11 ~nG~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~--~--------------------~~~~g 67 (121)
T 3qor_A 11 GNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKGQ--P--------------------AIIDG 67 (121)
T ss_dssp TSSCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEETTS--C--------------------CSEEE
T ss_pred CCCCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEcCc--c--------------------eEEec
Confidence 3445568899999999999999999 5 788999999994 8898864311 1 12246
Q ss_pred ECCCCcccCCeeEEEeCC-EEEEEEecCCC
Q 031515 119 VLPDNANVEKISALCQDG-VLIVTVEKVPP 147 (158)
Q Consensus 119 ~LP~~vd~~~i~A~~~nG-vL~I~~pk~~~ 147 (158)
.|...|+++.-...+.+| .|.|+|-|...
T Consensus 68 ~L~~~I~~deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 68 ELYNEVKVEESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp EBSSCBCGGGCEEEEETTTEEEEEEEBSSS
T ss_pred cccccccccccEEEEcCCCEEEEEEEECCC
Confidence 799999999989999988 99999999864
No 22
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.78 E-value=0.00021 Score=49.23 Aligned_cols=78 Identities=13% Similarity=0.068 Sum_probs=65.0
Q ss_pred ceeEEEeCCEEEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCC
Q 031515 49 PADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEK 128 (158)
Q Consensus 49 ~~~i~e~~d~~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~ 128 (158)
.++++++.+.+.|++.+|+. +++.|.+. .+.|.+++...... ..|.-.+.|-..|++++
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~-~~~l~~~~~~~~~~------------------~~y~~~l~L~~~I~~e~ 63 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFE-KSKLTFSCLGGSDN------------------FKHLNEIDLFHCIDPND 63 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEE-TTEEEEEEEETTTT------------------EEEEEEEEBSSCEEEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEE-CCEEEEEEEeCCCC------------------ceEEEEEEccceecccc
Confidence 79999999999999999995 68999999 48999997642111 12667789999999998
Q ss_pred eeEEEeCCEEEEEEecCCC
Q 031515 129 ISALCQDGVLIVTVEKVPP 147 (158)
Q Consensus 129 i~A~~~nGvL~I~~pk~~~ 147 (158)
.+.+..++.+.|+|.|..+
T Consensus 64 S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 64 SKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp EEEEECSSCEEEEEEESST
T ss_pred CEEEECCCEEEEEEEECCC
Confidence 8888888899999999864
No 23
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.77 E-value=0.00015 Score=50.35 Aligned_cols=81 Identities=21% Similarity=0.238 Sum_probs=65.8
Q ss_pred cCCCCceeEEEeCCEEEEEEEcC-C--CCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEEC
Q 031515 44 AMAATPADVVEYPNSYVFVVDMP-G--IKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVL 120 (158)
Q Consensus 44 ~~~~p~~~i~e~~d~~~i~~~lP-G--~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~L 120 (158)
+...|.+.+.++.+...|.+.|| | +.++++.|.+. .+.|.|..+.. . +.-...|
T Consensus 4 g~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~-~~~l~v~~kg~--~--------------------~~~~~~L 60 (131)
T 1wfi_A 4 GSSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQ-RRHLRVGLKGQ--P--------------------PVVDGEL 60 (131)
T ss_dssp SSSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEE-TTEEEEEETTS--C--------------------CSBCSCB
T ss_pred CCCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEe-CCEEEEEECCc--e--------------------EEEeccc
Confidence 34457899999999999999999 6 88999999999 48999985310 0 1123568
Q ss_pred CCCcccCCeeEEEeCC-EEEEEEecCCC
Q 031515 121 PDNANVEKISALCQDG-VLIVTVEKVPP 147 (158)
Q Consensus 121 P~~vd~~~i~A~~~nG-vL~I~~pk~~~ 147 (158)
...|+++.-+..+.+| .|.|+|-|...
T Consensus 61 ~~~I~~e~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 61 YNEVKVEESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp SSCBCSTTCEEEEETTTEEEEEEEBSSS
T ss_pred ccccccccCEEEEcCCCEEEEEEEECCC
Confidence 8899999999999988 89999999865
No 24
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.73 E-value=0.00042 Score=48.03 Aligned_cols=76 Identities=14% Similarity=0.067 Sum_probs=61.6
Q ss_pred CCceeEEEeCCEEEEEEEcC-CCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcc
Q 031515 47 ATPADVVEYPNSYVFVVDMP-GIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNAN 125 (158)
Q Consensus 47 ~p~~~i~e~~d~~~i~~~lP-G~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd 125 (158)
.|.+.+.++.+.+.|.+.|| |++++++.|.+. .+.|.|.+. . .. .-...|...|+
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~-~~~l~v~~~----g--------~~-----------~~~~~L~~~I~ 59 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMV-GKKICVKNQ----G--------EI-----------VIDGELLHEVD 59 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEE-TTEEEEEET----T--------EE-----------EEEEEBSSCEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEE-CCEEEEEEC----C--------Ee-----------eEccccccccc
Confidence 47899999999999999996 899999999999 589999852 1 00 12467999999
Q ss_pred cCCeeEEEeCCEEEEEEecCC
Q 031515 126 VEKISALCQDGVLIVTVEKVP 146 (158)
Q Consensus 126 ~~~i~A~~~nGvL~I~~pk~~ 146 (158)
++.-+..+.+|.|.|+|-|..
T Consensus 60 ~e~S~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 60 VSSLWWVINGDVVDVNVTKKR 80 (131)
T ss_dssp EEEEEEEEETTEEEEEEEESS
T ss_pred cccCEEEEeCCEEEEEEEECC
Confidence 998889999999999999983
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.55 E-value=0.00057 Score=48.94 Aligned_cols=78 Identities=14% Similarity=0.121 Sum_probs=65.1
Q ss_pred CCCceeEEEeCCEEEEEEEcC-CCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCc
Q 031515 46 AATPADVVEYPNSYVFVVDMP-GIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNA 124 (158)
Q Consensus 46 ~~p~~~i~e~~d~~~i~~~lP-G~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~v 124 (158)
..|.+.+.++.+.+.|+|.|| |++.++|.|.+.. +.|.|..+ . .. + -...|...|
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k----g--------~~----------~-l~g~L~~~I 67 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVG----G--------RE----------I-LKGKLFDST 67 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEET----T--------EE----------E-EEEEBSSCB
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEEC----C--------EE----------E-Eeecccccc
Confidence 457899999999999999998 8899999999994 89999842 1 00 2 346799999
Q ss_pred ccCCeeEEEeCCE-EEEEEecCCC
Q 031515 125 NVEKISALCQDGV-LIVTVEKVPP 147 (158)
Q Consensus 125 d~~~i~A~~~nGv-L~I~~pk~~~ 147 (158)
+++.-+..+.++. |.|+|-|...
T Consensus 68 ~~eeS~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 68 IADEGTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp CGGGCEEEEECCCEEEEEEEBSSC
T ss_pred CccccEEEEcCCcEEEEEEEEcCC
Confidence 9999999998875 9999999875
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.52 E-value=0.00037 Score=49.55 Aligned_cols=78 Identities=15% Similarity=0.168 Sum_probs=63.7
Q ss_pred CCceeEEEeCCEEEEEEEcCCCCCCCeEEEEe-eCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcc
Q 031515 47 ATPADVVEYPNSYVFVVDMPGIKASEIKVQVE-SENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNAN 125 (158)
Q Consensus 47 ~p~~~i~e~~d~~~i~~~lPG~~~~~i~v~v~-d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd 125 (158)
.|.+.++++.+.++|++.||++ +++.|.++ + +.|.+++. ... + ..|.-.+.|=..|+
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~--~~~-------~----------~~y~~~l~L~~~Id 61 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL--GAQ-------G----------ERFEFSLELYGKIM 61 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE--TTT-------T----------EEEEEEEEBSSCEE
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE--cCC-------C----------ceEEEEeEhhhccc
Confidence 4889999999999999999997 47888888 5 68999986 111 1 12667789999999
Q ss_pred cCCeeEEEeCCEEEEEEecCCC
Q 031515 126 VEKISALCQDGVLIVTVEKVPP 147 (158)
Q Consensus 126 ~~~i~A~~~nGvL~I~~pk~~~ 147 (158)
++ -+.+.....+.|+|.|+++
T Consensus 62 pe-S~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 62 TE-YRKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EE-EEEEEESSSEEEEEEECCS
T ss_pred cc-ceEEecCCEEEEEEEECCC
Confidence 99 8888888889999999875
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.46 E-value=4e-05 Score=53.60 Aligned_cols=84 Identities=8% Similarity=0.124 Sum_probs=59.0
Q ss_pred CCceeEEEeCCE-------EEEEEEcCCCCCCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEE
Q 031515 47 ATPADVVEYPNS-------YVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFV 119 (158)
Q Consensus 47 ~p~~~i~e~~d~-------~~i~~~lPG~~~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~ 119 (158)
.|.+.+.++.+. ++|++.+|++. ++.|.+.. +.|.+++...... .... ...|.-.+.
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~~~----g~~~---------~~~y~~~l~ 69 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQSKPHV----GDEN---------VHHYQLHID 69 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC--------------------CEEBCEEEE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEeccccc----CCcc---------CceEEEEEE
Confidence 467888888766 99999999974 88888884 8999987643210 0000 012566789
Q ss_pred CCCCcccCCeeEEEeCCE-EEEEEecCC
Q 031515 120 LPDNANVEKISALCQDGV-LIVTVEKVP 146 (158)
Q Consensus 120 LP~~vd~~~i~A~~~nGv-L~I~~pk~~ 146 (158)
|...|++++.+..+.++. |.|+|.|..
T Consensus 70 L~~~Idpe~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 70 LYKEIIPEKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp CSSCCCSSSEEEEECCC--CEEEEEECS
T ss_pred ChhhccccccEEEECCCEEEEEEEEECC
Confidence 999999999999999888 999999987
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=86.47 E-value=1.8 Score=26.95 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=28.9
Q ss_pred eEEEEEECCCCcccCCeeEEEeCCEEEEEEecCCC
Q 031515 113 KFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPP 147 (158)
Q Consensus 113 ~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pk~~~ 147 (158)
.|.-.+.|| +++++.|+..+.+|.|+|..-+...
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~~ 41 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAAR 41 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC--
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEccc
Confidence 477889999 6999999999999999999987643
No 29
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=81.15 E-value=3.5 Score=26.21 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=29.4
Q ss_pred eEEEEEECCCCcccCCeeEEEeCCEEEEEEecCCC
Q 031515 113 KFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPP 147 (158)
Q Consensus 113 ~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pk~~~ 147 (158)
.|.-.+.|| +++.+.|+..+++|.|+|..-+...
T Consensus 15 ~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~~ 48 (100)
T 3gla_A 15 HFVLYADLP-GIDPSQIEVQMDKGILSIRGERKSE 48 (100)
T ss_dssp EEEEEEECT-TSCGGGCEEEEETTEEEEEEEECCG
T ss_pred EEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcCc
Confidence 477789999 6999999999999999999877643
No 30
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=80.15 E-value=3.9 Score=25.63 Aligned_cols=33 Identities=12% Similarity=0.127 Sum_probs=28.8
Q ss_pred eEEEEEECCCCcccCCeeEEEeCCEEEEEEecCC
Q 031515 113 KFMRKFVLPDNANVEKISALCQDGVLIVTVEKVP 146 (158)
Q Consensus 113 ~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pk~~ 146 (158)
.|.-.+.|| +++++.|+..+.+|.|+|..-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 377889999 799999999999999999987653
No 31
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=77.43 E-value=4.8 Score=26.11 Aligned_cols=32 Identities=13% Similarity=0.154 Sum_probs=28.3
Q ss_pred eEEEEEECCCCcccCCeeEEEeCCEEEEEEecC
Q 031515 113 KFMRKFVLPDNANVEKISALCQDGVLIVTVEKV 145 (158)
Q Consensus 113 ~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pk~ 145 (158)
.|.-.+.|| +++++.|+..+.+|.|+|..-+.
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 478889999 79999999999999999998654
No 32
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=77.33 E-value=6.8 Score=25.93 Aligned_cols=34 Identities=26% Similarity=0.198 Sum_probs=29.7
Q ss_pred eEEEEEECCCCcccCCeeEEEeC-CEEEEEEecCCC
Q 031515 113 KFMRKFVLPDNANVEKISALCQD-GVLIVTVEKVPP 147 (158)
Q Consensus 113 ~f~r~~~LP~~vd~~~i~A~~~n-GvL~I~~pk~~~ 147 (158)
.|.-.+.|| +++.+.|+..+.+ |.|+|..-+...
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 477789999 6999999999999 999999987664
No 33
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=77.24 E-value=5.1 Score=25.69 Aligned_cols=32 Identities=16% Similarity=0.069 Sum_probs=28.7
Q ss_pred EEEEEECCCCcccCCeeEEEeCCEEEEEEecCC
Q 031515 114 FMRKFVLPDNANVEKISALCQDGVLIVTVEKVP 146 (158)
Q Consensus 114 f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pk~~ 146 (158)
|.-.+.|| +++++.|+..+.+|.|+|..-+..
T Consensus 13 ~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 13 FSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp EEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 77789999 799999999999999999987754
No 34
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=77.11 E-value=7.7 Score=26.99 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=28.6
Q ss_pred EEEEEECCCCcccCCeeEEEeCCEEEEEEecCCC
Q 031515 114 FMRKFVLPDNANVEKISALCQDGVLIVTVEKVPP 147 (158)
Q Consensus 114 f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pk~~~ 147 (158)
|.-.+.|| +++.+.|+..+++|.|+|..-+...
T Consensus 68 ~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~~ 100 (161)
T 4eld_A 68 IKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSPL 100 (161)
T ss_dssp EEEEEECT-TCCGGGEEEEEETTEEEEEEECCCC
T ss_pred EEEEEECC-CCChHhEEEEEECCEEEEEEEEccc
Confidence 66678998 6899999999999999999987763
No 35
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=76.94 E-value=6 Score=25.30 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=29.1
Q ss_pred ceEEEEEECCCCcccCCeeEEEeCCEEEEEEecCC
Q 031515 112 GKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVP 146 (158)
Q Consensus 112 ~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pk~~ 146 (158)
..|.-.+.|| +++.+.|+..++++.|+|..-+..
T Consensus 16 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~ 49 (102)
T 4fei_A 16 THLDLLLDVP-GVDAGTLALAEDGGQLTVSGERPG 49 (102)
T ss_dssp TEEEEEEECT-TCCGGGCEEEEETTEEEEEEEECC
T ss_pred CEEEEEEECC-CCchHhEEEEEECCEEEEEEEEec
Confidence 3477889999 799999999999999999887643
No 36
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=71.95 E-value=6.6 Score=23.81 Aligned_cols=30 Identities=17% Similarity=0.327 Sum_probs=18.6
Q ss_pred CCeeEEEeCCEEEEEEecCCCCCCceEEEee
Q 031515 127 EKISALCQDGVLIVTVEKVPPPQPKTIQVQV 157 (158)
Q Consensus 127 ~~i~A~~~nGvL~I~~pk~~~~~~~~I~I~~ 157 (158)
..|+|.|+||+|+-.=| ..-++..++.|.+
T Consensus 3 k~IeAiYEnGVfkPLe~-l~L~EG~kV~I~I 32 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQK-VDLKEGERVKIKL 32 (69)
T ss_dssp CCEEEEEETTEEEESSC-CCCCTTEEEEEEC
T ss_pred ceEEEEEECCEEeECCc-CCCCCCCEEEEEE
Confidence 45899999999974322 2233445555544
No 37
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=67.17 E-value=14 Score=25.49 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=27.2
Q ss_pred EEEEEECCCCcccCCeeEEEe-CCEEEEEEecCCC
Q 031515 114 FMRKFVLPDNANVEKISALCQ-DGVLIVTVEKVPP 147 (158)
Q Consensus 114 f~r~~~LP~~vd~~~i~A~~~-nGvL~I~~pk~~~ 147 (158)
|.-.+.|| +++.+.|+..+. ++.|+|..-+...
T Consensus 55 ~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 55 HVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp EEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred EEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 56678899 689999999995 6799999977654
No 38
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=62.44 E-value=20 Score=23.08 Aligned_cols=18 Identities=11% Similarity=0.466 Sum_probs=15.2
Q ss_pred CCCeEEEEeeCcEEEEEEE
Q 031515 70 ASEIKVQVESENVLVVSGE 88 (158)
Q Consensus 70 ~~~i~v~v~d~~~L~I~g~ 88 (158)
|+.++|+++ ++.++|+|.
T Consensus 20 P~gV~V~i~-~~~VtVKGP 37 (100)
T 2cql_A 20 PENVDITLK-GRTVIVKGP 37 (100)
T ss_dssp CSSCEEEEE-TTEEEEEET
T ss_pred CCCCEEEEe-CCEEEEECC
Confidence 567899999 689999976
No 39
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=62.18 E-value=13 Score=26.40 Aligned_cols=32 Identities=13% Similarity=0.103 Sum_probs=28.1
Q ss_pred EEEEEECCCCcccCCeeEEEeCCEEEEEEecCC
Q 031515 114 FMRKFVLPDNANVEKISALCQDGVLIVTVEKVP 146 (158)
Q Consensus 114 f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pk~~ 146 (158)
|.-.+.|| +++++.|+..+.+|.|+|..-+..
T Consensus 75 ~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 75 FSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 67789999 799999999999999999987654
No 40
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=60.13 E-value=23 Score=25.31 Aligned_cols=46 Identities=22% Similarity=0.335 Sum_probs=31.3
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeeEEEeCCEEEEEEecC
Q 031515 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKV 145 (158)
Q Consensus 70 ~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pk~ 145 (158)
|+.++|+++ ++.++|+|. .|...+ .|+..+ +...+||.|.|..+..
T Consensus 11 P~gV~V~i~-~~~VtVkGp----------------------kG~L~~--~~~~~v-----~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVN-GNTVTVKGP----------------------KGELTR--TFHPDM-----TITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEE-TTEEEEEET----------------------TEEEEE--ECCTTC-----EEEEETTEEEEECSCC
T ss_pred CCCCEEEEe-CCEEEEECC----------------------CeEEEE--EcCCCE-----EEEEeCCEEEEEcCCC
Confidence 567899998 689999976 233444 345444 5557899988875543
No 41
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=58.63 E-value=50 Score=24.68 Aligned_cols=64 Identities=20% Similarity=0.356 Sum_probs=41.1
Q ss_pred EcCCCCCCCeE-EEEe-eCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeeEEEeCCEEEEE
Q 031515 64 DMPGIKASEIK-VQVE-SENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVT 141 (158)
Q Consensus 64 ~lPG~~~~~i~-v~v~-d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~ 141 (158)
.|||+..+ ++ +... +++.|.+... +....+..... |.+.++++|...-|++.|... .+|.+.|.
T Consensus 21 ~l~g~~~~-lSGla~~~~~~~L~aV~d-----------~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 21 EIAGITNN-ISSLTWSAQSNTLFSTIN-----------KPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-GDNQFVIS 86 (255)
T ss_dssp ECTTCCSC-EEEEEEETTTTEEEEEEE-----------TTEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-STTEEEEE
T ss_pred ECCCcccC-cceeEEeCCCCEEEEEEC-----------CCCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-CCCEEEEE
Confidence 58999874 54 6665 3467776533 23334433333 789999999877888888653 56665553
No 42
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=56.87 E-value=29 Score=25.63 Aligned_cols=46 Identities=17% Similarity=0.297 Sum_probs=30.7
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeeEEEeCCEEEEEEecC
Q 031515 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKV 145 (158)
Q Consensus 70 ~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pk~ 145 (158)
|+.++|+++ ++.++|+|.+ |...+. |+.. ++...+||.|.|..+..
T Consensus 39 P~gV~V~i~-~~~VtVKGPk----------------------G~L~~~--~~~~-----v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQ-DGVFKVKGPK----------------------GELTVP--YNTE-----LTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEe-CCEEEEECCC----------------------EEEEEE--CCCC-----eEEEEECCEEEEEcCCC
Confidence 567889998 5899999763 233443 3443 44556888888876543
No 43
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=51.86 E-value=29 Score=24.94 Aligned_cols=44 Identities=27% Similarity=0.494 Sum_probs=28.9
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeeEEEeCCEEEEEE
Q 031515 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTV 142 (158)
Q Consensus 70 ~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~ 142 (158)
|+.++|++. |+.++|+|. .|...+.|.-| . ++...+++.|.|..
T Consensus 14 P~gV~v~i~-~~~V~VkGp----------------------kG~L~~~~~~~-~-----v~i~~~~~~l~v~~ 57 (184)
T 3j21_F 14 PEGVEVTVE-GYKVKVKGP----------------------KGELEREFFWP-G-----IQIFTEDGNVVIYK 57 (184)
T ss_dssp CSSCEEEES-SSEEEEECS----------------------SCEEEEECCCT-T-----CEEEEETTEEEEEC
T ss_pred CCCcEEEEe-CCEEEEEcC----------------------CeEEEEEecCC-c-----EEEEEeCCEEEEEE
Confidence 468899998 689999965 23344444312 2 34457788888864
No 44
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=50.73 E-value=44 Score=23.85 Aligned_cols=43 Identities=19% Similarity=0.306 Sum_probs=29.5
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeeEEEeCCEEEEEE
Q 031515 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTV 142 (158)
Q Consensus 70 ~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~ 142 (158)
|+.++|++. ++.++|+|. .|...+. |+..+ +...+++.|.|..
T Consensus 12 P~gV~v~i~-~~~v~VkGp----------------------kG~L~~~--~~~~v-----~i~~~~~~l~v~~ 54 (180)
T 3v2d_H 12 PKGVSVEVA-PGRVKVKGP----------------------KGELEVP--VSPEM-----RVVVEEGVVRVER 54 (180)
T ss_dssp CTTCEEEEE-TTEEEEECS----------------------SCEEEEE--CCTTS-----EEEEETTEEEEEC
T ss_pred CCCcEEEEe-CCEEEEEeC----------------------CcEEEEE--eCCCE-----EEEEECCEEEEEE
Confidence 578999998 689999965 2334444 45444 4456789888874
No 45
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=48.42 E-value=40 Score=24.07 Aligned_cols=46 Identities=11% Similarity=0.336 Sum_probs=30.5
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeeEEEeCCEEEEEEec
Q 031515 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEK 144 (158)
Q Consensus 70 ~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pk 144 (158)
|+.++|+++ ++.++|+|.+ |...+.|. +.. ++...++|.|.|..+.
T Consensus 9 P~gV~v~i~-~~~vtVkGpk----------------------G~L~~~~~-~~~-----v~i~~~~~~i~v~~~~ 54 (178)
T 1vq8_E 9 PEDVDAEQD-HLDITVEGDN----------------------GSVTRRLW-YPD-----IDVSVDGDTVVIESDE 54 (178)
T ss_dssp CTTCEEEEE-TTEEEEEETT----------------------EEEEEECC-CTT-----CEEEEETTEEEEECSC
T ss_pred CCCCEEEEe-CCEEEEECCC----------------------eEEEEEEE-CCe-----EEEEEECCEEEEEcCC
Confidence 467899998 6899999762 33444432 333 3555789998887554
No 46
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=39.83 E-value=1e+02 Score=22.14 Aligned_cols=18 Identities=17% Similarity=0.427 Sum_probs=15.4
Q ss_pred CCCeEEEEeeCcEEEEEEE
Q 031515 70 ASEIKVQVESENVLVVSGE 88 (158)
Q Consensus 70 ~~~i~v~v~d~~~L~I~g~ 88 (158)
|+.++|++. |+.++|+|.
T Consensus 13 P~gV~v~i~-~~~V~VkGP 30 (191)
T 3u5e_H 13 PEGVTVSIK-SRIVKVVGP 30 (191)
T ss_dssp CTTCEEEEE-TTEEEEEET
T ss_pred CCCcEEEEe-CCEEEEEcC
Confidence 578999998 689999976
No 47
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=39.64 E-value=43 Score=22.22 Aligned_cols=32 Identities=13% Similarity=0.138 Sum_probs=24.3
Q ss_pred ceEEEEEECCCCcccCCeeEEEeCCEEEEEEe
Q 031515 112 GKFMRKFVLPDNANVEKISALCQDGVLIVTVE 143 (158)
Q Consensus 112 ~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~p 143 (158)
....-.|.||.+++.+.+...+...-|.|.+.
T Consensus 14 ~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 14 NEINIQFPVTGDADSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp TEEEEEEECC---CCSCEEEEEETTEEEEEET
T ss_pred CEEEEEEECCCCCCccceEEEEECCEEEEEEC
Confidence 34566799999999999999999999999873
No 48
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=38.61 E-value=16 Score=23.81 Aligned_cols=17 Identities=35% Similarity=0.509 Sum_probs=14.5
Q ss_pred CeeEEEeCCEEEEEEec
Q 031515 128 KISALCQDGVLIVTVEK 144 (158)
Q Consensus 128 ~i~A~~~nGvL~I~~pk 144 (158)
.+.+.+.+|||+|+++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 37888999999999973
No 49
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=37.53 E-value=88 Score=22.48 Aligned_cols=18 Identities=33% Similarity=0.521 Sum_probs=15.3
Q ss_pred CCCeEEEEeeCcEEEEEEE
Q 031515 70 ASEIKVQVESENVLVVSGE 88 (158)
Q Consensus 70 ~~~i~v~v~d~~~L~I~g~ 88 (158)
|+.++|++. |+.++|+|.
T Consensus 13 P~gV~v~i~-~~~V~VkGP 30 (190)
T 3iz5_F 13 PEGVTVQVA-AKVVTVEGP 30 (190)
T ss_dssp CTTCEEEEE-TTEEEEEET
T ss_pred CCCCEEEEe-CCEEEEECC
Confidence 578899998 689999976
No 50
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=36.91 E-value=80 Score=21.06 Aligned_cols=30 Identities=20% Similarity=0.378 Sum_probs=20.1
Q ss_pred CeeEEE---eCCEEEEEEecCCCCCCceEEEee
Q 031515 128 KISALC---QDGVLIVTVEKVPPPQPKTIQVQV 157 (158)
Q Consensus 128 ~i~A~~---~nGvL~I~~pk~~~~~~~~I~I~~ 157 (158)
+|+..| .||+|.|++--....+...|.|+.
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~ 131 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDKNSGKEQKITIKA 131 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEEC
T ss_pred EEEEEEEECCCCEEEEEEEECCCCCEEEEEEec
Confidence 566665 399999999655544446666653
No 51
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=35.13 E-value=29 Score=23.37 Aligned_cols=16 Identities=13% Similarity=0.218 Sum_probs=14.1
Q ss_pred eeEEEeCCEEEEEEec
Q 031515 129 ISALCQDGVLIVTVEK 144 (158)
Q Consensus 129 i~A~~~nGvL~I~~pk 144 (158)
+.+.+.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 6888999999999974
No 52
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=33.43 E-value=30 Score=19.46 Aligned_cols=23 Identities=17% Similarity=0.318 Sum_probs=18.2
Q ss_pred CCCCeEEEEeeCcEEEEEEEEecC
Q 031515 69 KASEIKVQVESENVLVVSGERKRD 92 (158)
Q Consensus 69 ~~~~i~v~v~d~~~L~I~g~~~~~ 92 (158)
--+||.|..+ |+.+++.|+.+..
T Consensus 31 gyndinvtwd-gdtvtvegqlegg 53 (62)
T 2gjh_A 31 GYNDINVTWD-GDTVTVEGQLEGG 53 (62)
T ss_dssp TCCSCEEEEC-SSCEEEEEECCCC
T ss_pred CcccceeEEc-CCEEEEEeEEcCC
Confidence 4468899998 7899999986543
No 53
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=33.01 E-value=83 Score=22.65 Aligned_cols=23 Identities=9% Similarity=0.219 Sum_probs=16.9
Q ss_pred cCCCCCCCeEEEEeeCcEEEEEEE
Q 031515 65 MPGIKASEIKVQVESENVLVVSGE 88 (158)
Q Consensus 65 lPG~~~~~i~v~v~d~~~L~I~g~ 88 (158)
.|=-=|+.++|++. ++.++|+|.
T Consensus 8 ~pI~IP~gV~V~i~-~~~VtVkGp 30 (192)
T 2zkr_e 8 QTVDIPENVDITLK-GRTVIVKGP 30 (192)
T ss_dssp --CCCCTTCEEEEE-TTEEEEEET
T ss_pred CcEEcCCCCEEEEe-CCEEEEECC
Confidence 34334678999999 689999976
No 54
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=29.91 E-value=74 Score=20.79 Aligned_cols=33 Identities=9% Similarity=0.213 Sum_probs=27.1
Q ss_pred cceEEEEEECCCCc-ccCCeeEEEeCCEEEEEEe
Q 031515 111 FGKFMRKFVLPDNA-NVEKISALCQDGVLIVTVE 143 (158)
Q Consensus 111 ~~~f~r~~~LP~~v-d~~~i~A~~~nGvL~I~~p 143 (158)
.....-.|.||.++ +.+.+...+...-|.|.+.
T Consensus 28 ~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 28 YTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp TTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred ccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 34456679999888 8999999999999999873
No 55
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=29.30 E-value=32 Score=25.58 Aligned_cols=47 Identities=21% Similarity=0.306 Sum_probs=30.1
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeeEEEeCCEEEEEEecC
Q 031515 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKV 145 (158)
Q Consensus 70 ~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~pk~ 145 (158)
|+.++|+++ ++.++|+|.+ |...+ .|+..++.. ..+||.|.|..+..
T Consensus 54 P~gV~V~i~-~~~VtVKGPk----------------------G~L~~--~~~~~v~i~----~~e~~~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALE-GQDLKVKGPL----------------------GELAL--TYPREVELT----KEESGFLRVKKTVE 100 (223)
T ss_dssp STTSCEEES-SSEEEECCSS----------------------CCEEE--ECCSSCEEE----ECSSSCEEEECSSC
T ss_pred CCCCEEEEe-CCEEEEECCC----------------------eEEEE--EcCCCEEEE----EecCCEEEEEcCCC
Confidence 567889998 5899998752 33444 445554331 45788888876543
No 56
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=29.05 E-value=36 Score=24.25 Aligned_cols=42 Identities=19% Similarity=0.387 Sum_probs=28.3
Q ss_pred CCCeEEEEeeCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeeEEEeCCEEEEE
Q 031515 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVT 141 (158)
Q Consensus 70 ~~~i~v~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~ 141 (158)
|+.++|++. ++.++|+|.+. ...+. |+..+ +...+++.|.|.
T Consensus 11 P~gV~v~i~-~~~V~VkGpkG----------------------~L~~~--~~~~v-----~i~~~~~~l~v~ 52 (176)
T 3r8s_G 11 PAGVDVKIN-GQVITIKGKNG----------------------ELTRT--LNDAV-----EVKHADNTLTFG 52 (176)
T ss_dssp CTTCCCEES-SSEEECCBTTB----------------------CCEEE--CCSSC-----EEEEETTEEEEE
T ss_pred CCCcEEEEe-CCEEEEEcCCE----------------------EEEEE--CCCCE-----EEEEeCCEEEEE
Confidence 567888888 68999886532 23443 35444 455788988887
No 57
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=28.47 E-value=1e+02 Score=20.11 Aligned_cols=36 Identities=14% Similarity=0.143 Sum_probs=26.5
Q ss_pred EEEeCCEEEEEEEc-CCCCCCCeEEEEeeCcEEEEEEEE
Q 031515 52 VVEYPNSYVFVVDM-PGIKASEIKVQVESENVLVVSGER 89 (158)
Q Consensus 52 i~e~~d~~~i~~~l-PG~~~~~i~v~v~d~~~L~I~g~~ 89 (158)
+.+.++.+.|.+.+ ||.+++.|. .+. ++.|.|+-..
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I~-g~~-~~~LkV~v~A 44 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSIV-GLH-GDEVKVAITA 44 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEEE-EEC-SSCEEEECCC
T ss_pred EEECCCeEEEEEEEeeCCCcceee-ccc-CCEEEEEEec
Confidence 45678889999988 899998773 456 4678777443
No 58
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=25.89 E-value=92 Score=28.28 Aligned_cols=90 Identities=16% Similarity=0.221 Sum_probs=52.8
Q ss_pred ceeEEEeCCEEEEEEEc----------CCCCCCCeEEEEeeCcEEEEEEEE---ecCCCCcCCCCCceEEEEeeecceEE
Q 031515 49 PADVVEYPNSYVFVVDM----------PGIKASEIKVQVESENVLVVSGER---KRDPKEKDNKDGVKYVRMERRFGKFM 115 (158)
Q Consensus 49 ~~~i~e~~d~~~i~~~l----------PG~~~~~i~v~v~d~~~L~I~g~~---~~~~~~~~~~~~~~~~~~e~~~~~f~ 115 (158)
.+.|.+.++.|++++.+ |||+..-|.|.++++.. |.. .... ...+..|...=+..|-|-
T Consensus 810 ~~~v~~~~~~~~~~~~~~~~~~npw~~~gfs~q~~~iy~~~~~~----g~~~~l~~~~----~~~~~~W~~~~~~~G~~~ 881 (1020)
T 1ulv_A 810 GVDVYDAGDDYAFVATIAGEVTNPWGGQAISHQRVNIYLGKGEG----GATPGLPGTN----INLEHAWDSVIVTDGRFD 881 (1020)
T ss_dssp EEEEEEETTEEEEEEEESSCCCCTTCCSSCSSEEEEEEEECSCS----SCEECSGGGC----CEESSCEEEEEEECCSTT
T ss_pred eeEEEEcCCEEEEEEEecccCCCCCCCCCcceeEEEEEEECCCC----CCcccCCccc----CCCCCCccEEEEEeccCC
Confidence 56889999999999988 68999999999986321 111 0111 122333443322233232
Q ss_pred EE-EECCCCcccCC--eeEEEeCCEEEEEEecCC
Q 031515 116 RK-FVLPDNANVEK--ISALCQDGVLIVTVEKVP 146 (158)
Q Consensus 116 r~-~~LP~~vd~~~--i~A~~~nGvL~I~~pk~~ 146 (158)
.. +..|.+-.... |.+.-.+..+++++||+-
T Consensus 882 ~~~~~~~~g~~~~~~~v~~~~~~~~i~~~v~~~~ 915 (1020)
T 1ulv_A 882 GAGVYAPDGTRTSAVSLLAVPEARQIVTRVPKAA 915 (1020)
T ss_dssp CCEEECTTSCEEECCEEEEETTTTEEEEEEEGGG
T ss_pred CcceECCCCCcCCCceEEEecCCCEEEEEEcHHH
Confidence 21 45565443333 344445889999999954
No 59
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=25.80 E-value=42 Score=22.64 Aligned_cols=17 Identities=29% Similarity=0.364 Sum_probs=14.5
Q ss_pred CCeeEEEeCCEEEEEEe
Q 031515 127 EKISALCQDGVLIVTVE 143 (158)
Q Consensus 127 ~~i~A~~~nGvL~I~~p 143 (158)
..+.+.+.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45788899999999995
No 60
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=25.77 E-value=59 Score=20.09 Aligned_cols=24 Identities=17% Similarity=0.368 Sum_probs=17.8
Q ss_pred CCCCCCeEEEEeeCcEEEEEEEEec
Q 031515 67 GIKASEIKVQVESENVLVVSGERKR 91 (158)
Q Consensus 67 G~~~~~i~v~v~d~~~L~I~g~~~~ 91 (158)
.+--++|.|.++ |+.+++.|+.+.
T Consensus 73 elgyndinvtfd-gdtvtvegqleg 96 (106)
T 1qys_A 73 ELGYNDINVTFD-GDTVTVEGQLEG 96 (106)
T ss_dssp HTTCCEEEEEEE-TTEEEEEEEC--
T ss_pred HhCCcceeEEEc-CCeEEEEeEEcC
Confidence 344578999999 799999998653
No 61
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=25.39 E-value=32 Score=21.13 Aligned_cols=15 Identities=20% Similarity=0.284 Sum_probs=12.2
Q ss_pred cCCeeEEEeCCEEEE
Q 031515 126 VEKISALCQDGVLIV 140 (158)
Q Consensus 126 ~~~i~A~~~nGvL~I 140 (158)
..+=++.+++|||.|
T Consensus 46 KnkWKc~LKdGim~i 60 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNL 60 (76)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CceEEEEEeccEEEE
Confidence 345689999999987
No 62
>3lyc_A Putative pectinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lipoprotein; HET: MSE; 2.30A {Parabacteroides distasonis}
Probab=25.11 E-value=1.1e+02 Score=22.19 Aligned_cols=28 Identities=18% Similarity=0.105 Sum_probs=19.2
Q ss_pred EEECCCCcccCCeeEEEeCCEEEEEEecC
Q 031515 117 KFVLPDNANVEKISALCQDGVLIVTVEKV 145 (158)
Q Consensus 117 ~~~LP~~vd~~~i~A~~~nGvL~I~~pk~ 145 (158)
.+.=|+++ .+.++...++|.|+|.+++.
T Consensus 40 ~i~~~~nl-~~~v~~~v~~g~L~I~~~~~ 67 (241)
T 3lyc_A 40 EIKTDRNI-FEKYEFNVENHKLKIRPKKE 67 (241)
T ss_dssp EEEEEHHH-HTTEEEEEETTEEEEEECGG
T ss_pred EEEECccc-cceEEEEEECCEEEEEEcCC
Confidence 33334333 46678888899999988876
No 63
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=22.33 E-value=81 Score=23.04 Aligned_cols=44 Identities=11% Similarity=0.348 Sum_probs=24.1
Q ss_pred EEeeCcEEEEEEEEecCCCCcCCCCCceEEEEe---eecceEEEEEECCCC
Q 031515 76 QVESENVLVVSGERKRDPKEKDNKDGVKYVRME---RRFGKFMRKFVLPDN 123 (158)
Q Consensus 76 ~v~d~~~L~I~g~~~~~~~~~~~~~~~~~~~~e---~~~~~f~r~~~LP~~ 123 (158)
.+.+++.|+|++.+.... .-.+.++.+.. ..+|.|+-+++||..
T Consensus 53 ~v~~~G~L~I~~~~~~~~----~~~S~~i~S~~~f~~~yG~~E~r~klp~g 99 (245)
T 2hyk_A 53 ALDGNGNLVITARQEADG----GYTSARLTTQNKVQPQYGRVEASIQIPRG 99 (245)
T ss_dssp EECSSSCEEEEEEECTTS----CEEECEEECTTTCCCCSEEEEEEEECCCS
T ss_pred EEecCCEEEEEEEecCCC----CEEEEEEEccCcccccCCeEEEEEEcCCC
Confidence 445324688888765421 11122222221 336788888999964
No 64
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=21.64 E-value=1.9e+02 Score=19.53 Aligned_cols=30 Identities=13% Similarity=0.287 Sum_probs=19.9
Q ss_pred CCeeEEE--e-CCEEEEEEecCCCCCCceEEEe
Q 031515 127 EKISALC--Q-DGVLIVTVEKVPPPQPKTIQVQ 156 (158)
Q Consensus 127 ~~i~A~~--~-nGvL~I~~pk~~~~~~~~I~I~ 156 (158)
-+|+..| + ||+|.|.+--....+...|.|+
T Consensus 81 ~~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~ 113 (151)
T 3dqg_A 81 PQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQ 113 (151)
T ss_dssp SCEEEEEEECTTSEEEEEEEETTTCCEEEEEEE
T ss_pred cEEEEEEEeccCcEEEEEEEEccCCCEeEEEEe
Confidence 3465555 3 9999999975554444666664
No 65
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=21.49 E-value=2e+02 Score=19.53 Aligned_cols=30 Identities=23% Similarity=0.399 Sum_probs=19.6
Q ss_pred CCeeEEE--e-CCEEEEEEecCCCCCCceEEEe
Q 031515 127 EKISALC--Q-DGVLIVTVEKVPPPQPKTIQVQ 156 (158)
Q Consensus 127 ~~i~A~~--~-nGvL~I~~pk~~~~~~~~I~I~ 156 (158)
-+|+..| + ||+|.|.+--....+...|.|+
T Consensus 81 ~~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~ 113 (152)
T 3dob_A 81 PQIEVTFNIDANGILNVSAEDKSTGKSNRITIQ 113 (152)
T ss_dssp CCEEEEEEECTTCCEEEEEEETTTCCEEEEEEC
T ss_pred ceEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 3465555 3 9999999975554444566664
No 66
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=21.32 E-value=1.7e+02 Score=18.85 Aligned_cols=26 Identities=12% Similarity=0.080 Sum_probs=14.3
Q ss_pred EEEEECCCCcccCCeeEEEeCCEEEEEEecC
Q 031515 115 MRKFVLPDNANVEKISALCQDGVLIVTVEKV 145 (158)
Q Consensus 115 ~r~~~LP~~vd~~~i~A~~~nGvL~I~~pk~ 145 (158)
.|++..|.+ ++|.++|.+|.|.+.+.
T Consensus 22 ~RSI~~~iP-----i~A~id~~~L~I~F~~~ 47 (108)
T 3d33_A 22 IRSAATNCP-----ITVFTDGYLLTLKNASP 47 (108)
T ss_dssp ------CCS-----EEEEEETTEEEEEESSC
T ss_pred ccccCCCCC-----cEEEEECCEEEEEECCc
Confidence 577764433 47888888999988543
No 67
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=20.99 E-value=2e+02 Score=19.43 Aligned_cols=30 Identities=17% Similarity=0.337 Sum_probs=20.0
Q ss_pred CCeeEEE--e-CCEEEEEEecCCCCCCceEEEe
Q 031515 127 EKISALC--Q-DGVLIVTVEKVPPPQPKTIQVQ 156 (158)
Q Consensus 127 ~~i~A~~--~-nGvL~I~~pk~~~~~~~~I~I~ 156 (158)
-+|+..| + ||+|.|++--....+...|.|+
T Consensus 81 ~~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~ 113 (152)
T 3h0x_A 81 PQIEVTFALDANGILKVSATDKGTGKSESITIT 113 (152)
T ss_dssp SCEEEEEEECTTSEEEEEEEETTTCCEEEEEEE
T ss_pred ceEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEe
Confidence 3466555 3 9999999976554444566664
No 68
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=20.82 E-value=2.1e+02 Score=19.55 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=27.1
Q ss_pred cceEEEEEECCCCcccCCeeEEEeCCEEEEEEe
Q 031515 111 FGKFMRKFVLPDNANVEKISALCQDGVLIVTVE 143 (158)
Q Consensus 111 ~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~p 143 (158)
.....-.|.||.++..+.+...+...-|.|.+.
T Consensus 22 ~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 22 LEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp SSEEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred CCEEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 334566799999999999999999999998773
No 69
>1nh2_C Transcription initiation factor IIA large chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: b.56.1.1 PDB: 1ytf_C*
Probab=20.34 E-value=46 Score=20.56 Aligned_cols=15 Identities=20% Similarity=0.372 Sum_probs=12.2
Q ss_pred cCCeeEEEeCCEEEE
Q 031515 126 VEKISALCQDGVLIV 140 (158)
Q Consensus 126 ~~~i~A~~~nGvL~I 140 (158)
..+=++.+++|||.|
T Consensus 48 KnKWKc~LKdGi~~i 62 (79)
T 1nh2_C 48 KARWKCSLKDGVVTI 62 (79)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred cceEEEEEeeeEEEE
Confidence 345689999999987
No 70
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=20.07 E-value=2e+02 Score=19.18 Aligned_cols=29 Identities=17% Similarity=0.340 Sum_probs=18.0
Q ss_pred CeeEEE--e-CCEEEEEEecCCCCCCceEEEe
Q 031515 128 KISALC--Q-DGVLIVTVEKVPPPQPKTIQVQ 156 (158)
Q Consensus 128 ~i~A~~--~-nGvL~I~~pk~~~~~~~~I~I~ 156 (158)
+|+..| + ||+|.|++--....+...|.|+
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~ 113 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTIT 113 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEee
Confidence 566655 3 9999999864433333555553
Done!