Your job contains 1 sequence.
>031516
MCFDDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEH
QEVCGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPP
PPNEFYRKRFLLTIAITGIAVLLGSLFFPRKTETSQVH
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031516
(158 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024351 - symbol:AT1G09920 species:3702 "Arabi... 464 5.0e-44 1
ZFIN|ZDB-GENE-060929-840 - symbol:zgc:153893 "zgc:153893"... 185 1.8e-14 1
UNIPROTKB|Q6GPH4 - symbol:XAF1 "XIAP-associated factor 1"... 182 6.2e-14 1
UNIPROTKB|C9J7Z8 - symbol:XAF1 "XIAP-associated factor 1"... 168 1.2e-12 1
UNIPROTKB|I3L3D9 - symbol:XAF1 "XIAP-associated factor 1"... 168 1.2e-12 1
UNIPROTKB|F8VVF3 - symbol:TRAFD1 "TRAF-type zinc finger d... 160 8.2e-12 1
UNIPROTKB|Q58DH1 - symbol:XAF1 "XIAP-associated factor 1"... 163 9.0e-12 1
ZFIN|ZDB-GENE-070410-43 - symbol:zgc:162228 "zgc:162228" ... 167 1.5e-11 1
UNIPROTKB|F8VNX8 - symbol:TRAFD1 "TRAF-type zinc finger d... 160 1.6e-11 1
RGD|620171 - symbol:Trafd1 "TRAF type zinc finger domain ... 166 2.0e-11 1
UNIPROTKB|Q99MM4 - symbol:Trafd1 "TRAF-type zinc finger d... 166 2.0e-11 1
MGI|MGI:1923551 - symbol:Trafd1 "TRAF type zinc finger do... 165 2.6e-11 1
UNIPROTKB|B4DI89 - symbol:TRAFD1 "TRAF-type zinc finger d... 155 2.8e-11 1
UNIPROTKB|Q58D05 - symbol:TRAFD1 "TRAF-type zinc finger d... 160 8.9e-11 1
UNIPROTKB|O14545 - symbol:TRAFD1 "TRAF-type zinc finger d... 160 9.0e-11 1
UNIPROTKB|Q4R970 - symbol:TRAFD1 "TRAF-type zinc finger d... 160 9.0e-11 1
UNIPROTKB|E1BXU9 - symbol:XAF1 "Uncharacterized protein" ... 145 3.2e-10 1
UNIPROTKB|E2RS24 - symbol:TRAFD1 "Uncharacterized protein... 153 5.1e-10 1
UNIPROTKB|I3L509 - symbol:XAF1 "XIAP-associated factor 1"... 131 9.7e-09 1
UNIPROTKB|E1BQZ6 - symbol:TRAFD1 "Uncharacterized protein... 139 1.5e-08 1
UNIPROTKB|C9K044 - symbol:XAF1 "XIAP-associated factor 1"... 129 6.0e-08 1
TAIR|locus:2130120 - symbol:AT4G15420 species:3702 "Arabi... 126 3.8e-07 1
UNIPROTKB|E1C626 - symbol:TRAF6 "Uncharacterized protein"... 116 4.4e-06 1
UNIPROTKB|Q28DL4 - symbol:traf6 "TNF receptor-associated ... 115 1.2e-05 1
MGI|MGI:3772572 - symbol:Xaf1 "XIAP associated factor 1" ... 112 2.2e-05 1
RGD|1585988 - symbol:XAF1 "XIAP associated factor-1" spec... 111 4.7e-05 1
UNIPROTKB|Q9Y4K3 - symbol:TRAF6 "TNF receptor-associated ... 110 0.00015 1
UNIPROTKB|B6CJY4 - symbol:TRAF6 "TNF receptor-associated ... 110 0.00015 1
UNIPROTKB|B6CJY5 - symbol:TRAF6 "TNF receptor-associated ... 110 0.00015 1
UNIPROTKB|E1BW11 - symbol:TRAF3 "Uncharacterized protein"... 108 0.00020 1
RGD|1306853 - symbol:Traf6 "TNF receptor-associated facto... 109 0.00024 1
UNIPROTKB|Q3ZCC3 - symbol:TRAF6 "TNF receptor-associated ... 109 0.00025 1
UNIPROTKB|F1NMN9 - symbol:TRAF3 "Uncharacterized protein"... 108 0.00035 1
UNIPROTKB|E2RDE8 - symbol:TRAF6 "Uncharacterized protein"... 108 0.00036 1
UNIPROTKB|H0YL25 - symbol:TRAF3 "TNF receptor-associated ... 102 0.00044 1
UNIPROTKB|Q6DJN2 - symbol:traf6-b "TNF receptor-associate... 107 0.00050 1
DICTYBASE|DDB_G0290883 - symbol:DDB_G0290883 "TRAF-type z... 106 0.00057 1
ASPGD|ASPL0000066677 - symbol:AN10877 species:162425 "Eme... 107 0.00074 1
UNIPROTKB|E1BBH2 - symbol:TRAF3 "Uncharacterized protein"... 106 0.00077 1
>TAIR|locus:2024351 [details] [associations]
symbol:AT1G09920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:NOG75133 EMBL:AY136379 EMBL:BT000197 IPI:IPI00545372
RefSeq:NP_563857.1 UniGene:At.42203 ProteinModelPortal:Q8L7A5
SMR:Q8L7A5 PaxDb:Q8L7A5 PRIDE:Q8L7A5 EnsemblPlants:AT1G09920.1
GeneID:837524 KEGG:ath:AT1G09920 TAIR:At1g09920
HOGENOM:HOG000070958 InParanoid:Q8L7A5 OMA:LRERYNH PhylomeDB:Q8L7A5
ProtClustDB:CLSN2687749 ArrayExpress:Q8L7A5 Genevestigator:Q8L7A5
Uniprot:Q8L7A5
Length = 192
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 93/145 (64%), Positives = 105/145 (72%)
Query: 10 LHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTE 69
L+ +ACS C ET+EREI HKGE CP+RIVTC+FCEFPLPAVDLAEHQEVCGNRTE
Sbjct: 55 LNTHAPIACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTE 114
Query: 70 LCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNV-RAAESDQGAHRRPAPPPPNEFYRK 128
LC+ CN Y+RLRERYNHE++C G TV SSR + RAAE D RR N K
Sbjct: 115 LCYQCNSYVRLRERYNHETKCPG----TVESSRRIPRAAEGDGNGRRRR---DGNGVSNK 167
Query: 129 RFLLTIAITGIAVLLGSLFFPRKTE 153
R TIAITGIAV++GSLFF RK E
Sbjct: 168 RLFFTIAITGIAVIIGSLFFQRKPE 192
>ZFIN|ZDB-GENE-060929-840 [details] [associations]
symbol:zgc:153893 "zgc:153893" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001293 InterPro:IPR015880 PROSITE:PS50145
SMART:SM00355 ZFIN:ZDB-GENE-060929-840 GO:GO:0008270 GO:GO:0005622
eggNOG:NOG87143 OrthoDB:EOG4MGS7S EMBL:BC124485 IPI:IPI00807132
RefSeq:NP_001070115.1 UniGene:Dr.89531 ProteinModelPortal:Q08BZ9
GeneID:767709 KEGG:dre:767709 HOVERGEN:HBG105504 InParanoid:Q08BZ9
NextBio:20918097 Uniprot:Q08BZ9
Length = 273
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 34/94 (36%), Positives = 54/94 (57%)
Query: 11 HAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTEL 70
HA +V C +C + MER L H+ CP+R C+FC+ LP L H+ CG+RTE
Sbjct: 56 HA--EVKCKKCKKKMERRHLLDHENNECPERFEICEFCQLELPLSTLKVHKVSCGSRTER 113
Query: 71 CHLCNRYIRLRERYNHESRCTGVPENTVGSSRNV 104
C C++Y+++ ++ +H C P T +SR++
Sbjct: 114 CSDCDQYVKMTDQIDHAQIC---PATTQTTSRDL 144
>UNIPROTKB|Q6GPH4 [details] [associations]
symbol:XAF1 "XIAP-associated factor 1" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005829
"cytosol" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0060337 "type I interferon-mediated
signaling pathway" evidence=TAS] [GO:0035456 "response to
interferon-beta" evidence=IDA] InterPro:IPR001293 PROSITE:PS50145
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 Reactome:REACT_6900
GO:GO:0006915 EMBL:CH471108 GO:GO:0060337 GO:GO:0046872
GO:GO:0008270 GO:GO:0035456 CTD:54739 eggNOG:NOG87143
HOVERGEN:HBG108681 EMBL:X99699 EMBL:EF028165 EMBL:EF028166
EMBL:AK290276 EMBL:AK292710 EMBL:AK292848 EMBL:BC032776
EMBL:BC073156 EMBL:BX649188 IPI:IPI00013986 IPI:IPI00395806
IPI:IPI00788966 IPI:IPI00796968 IPI:IPI00889533 IPI:IPI00889535
IPI:IPI00889586 RefSeq:NP_059993.2 RefSeq:NP_954590.1
UniGene:Hs.441975 ProteinModelPortal:Q6GPH4 SMR:Q6GPH4
IntAct:Q6GPH4 STRING:Q6GPH4 DMDM:74736479 PRIDE:Q6GPH4
Ensembl:ENST00000346752 Ensembl:ENST00000361842
Ensembl:ENST00000571673 Ensembl:ENST00000574962 GeneID:54739
KEGG:hsa:54739 UCSC:uc002gdm.1 UCSC:uc002gdo.3 UCSC:uc002gdp.3
GeneCards:GC17P006659 HGNC:HGNC:30932 MIM:606717 neXtProt:NX_Q6GPH4
PharmGKB:PA162409299 OMA:CAMCQQS ChiTaRS:XAF1 GenomeRNAi:54739
NextBio:57333 ArrayExpress:Q6GPH4 Bgee:Q6GPH4 CleanEx:HS_XAF1
Genevestigator:Q6GPH4 Uniprot:Q6GPH4
Length = 301
Score = 182 (69.1 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 4 DDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEV 63
++ C H +QV C+ C ++M++ L HK C +R V C FC+ + L H+
Sbjct: 47 EEHCKLEH--QQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESY 104
Query: 64 CGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPN 123
CG+RTELC C ++I R H C + +G + A E + H P N
Sbjct: 105 CGSRTELCQGCGQFIMHRMLAQHRDVCRS-EQAQLGKGERISAPEREIYCHYCNQMIPEN 163
Query: 124 EFY 126
+++
Sbjct: 164 KYF 166
>UNIPROTKB|C9J7Z8 [details] [associations]
symbol:XAF1 "XIAP-associated factor 1" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 PROSITE:PS50145 GO:GO:0008270 HGNC:HGNC:30932
ChiTaRS:XAF1 EMBL:AC034305 IPI:IPI00952715 SMR:C9J7Z8 STRING:C9J7Z8
Ensembl:ENST00000438512 Ensembl:ENST00000576724 UCSC:uc010clr.1
HOGENOM:HOG000203872 Uniprot:C9J7Z8
Length = 164
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 30/87 (34%), Positives = 45/87 (51%)
Query: 4 DDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEV 63
++ C H +QV C+ C ++M++ L HK C +R V C FC+ + L H+
Sbjct: 47 EEHCKLEH--QQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESY 104
Query: 64 CGNRTELCHLCNRYIRLRERYNHESRC 90
CG+RTELC C ++I R H C
Sbjct: 105 CGSRTELCQGCGQFIMHRMLAQHRDVC 131
>UNIPROTKB|I3L3D9 [details] [associations]
symbol:XAF1 "XIAP-associated factor 1" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 PROSITE:PS50145 GO:GO:0008270 HGNC:HGNC:30932
ChiTaRS:XAF1 EMBL:AC034305 Ensembl:ENST00000574394 Bgee:I3L3D9
Uniprot:I3L3D9
Length = 133
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 30/87 (34%), Positives = 45/87 (51%)
Query: 4 DDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEV 63
++ C H +QV C+ C ++M++ L HK C +R V C FC+ + L H+
Sbjct: 47 EEHCKLEH--QQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESY 104
Query: 64 CGNRTELCHLCNRYIRLRERYNHESRC 90
CG+RTELC C ++I R H C
Sbjct: 105 CGSRTELCQGCGQFIMHRMLAQHRDVC 131
>UNIPROTKB|F8VVF3 [details] [associations]
symbol:TRAFD1 "TRAF-type zinc finger domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0034097 "response to cytokine stimulus" evidence=IEA]
[GO:0045824 "negative regulation of innate immune response"
evidence=IEA] InterPro:IPR015880 SMART:SM00355 GO:GO:0008270
GO:GO:0034097 GO:GO:0005622 GO:GO:0045824 EMBL:AC073575
HGNC:HGNC:24808 ChiTaRS:TRAFD1 IPI:IPI01021568
ProteinModelPortal:F8VVF3 SMR:F8VVF3 Ensembl:ENST00000549358
ArrayExpress:F8VVF3 Bgee:F8VVF3 Uniprot:F8VVF3
Length = 135
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
QV C +C++ +E+ +L H+ CP R+ C C+ L + L EH++ CG RTELC C
Sbjct: 61 QVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNC 119
Query: 75 NRYIRLRERYNHESRC 90
R + +++ H C
Sbjct: 120 GRNVLVKDLKTHPEVC 135
>UNIPROTKB|Q58DH1 [details] [associations]
symbol:XAF1 "XIAP-associated factor 1" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
PROSITE:PS50145 GO:GO:0005739 GO:GO:0005634 GO:GO:0006915
GO:GO:0046872 GeneTree:ENSGT00530000063869 EMBL:BT021626
EMBL:BC122801 IPI:IPI00688124 IPI:IPI00890677 RefSeq:NP_001030247.1
UniGene:Bt.33242 ProteinModelPortal:Q58DH1 STRING:Q58DH1
PRIDE:Q58DH1 Ensembl:ENSBTAT00000045638 GeneID:509740
KEGG:bta:509740 CTD:54739 eggNOG:NOG87143 HOGENOM:HOG000154869
HOVERGEN:HBG108681 NextBio:20869101 Uniprot:Q58DH1
Length = 297
Score = 163 (62.4 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 36/125 (28%), Positives = 61/125 (48%)
Query: 4 DDFCYSLHAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFP--LPAVDLAEHQ 61
++ C H +QV C+ C +++ + L H+ + C +R V C FC+ L VDL EH
Sbjct: 47 EEHCQGGH--QQVGCAMCQQSVPKHSLDSHEAQECQERPVECQFCQLAVRLNKVDLHEHH 104
Query: 62 EVCGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPP 121
CG +TELC C +++ LR H C + + +++ ES+ H P
Sbjct: 105 --CGQQTELCPDCGQHVMLRVLARHREECQR-EQLRLQKGKSIPVPESNICCHYCNQMIP 161
Query: 122 PNEFY 126
N+++
Sbjct: 162 GNKYF 166
>ZFIN|ZDB-GENE-070410-43 [details] [associations]
symbol:zgc:162228 "zgc:162228" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001293 PROSITE:PS50145
ZFIN:ZDB-GENE-070410-43 GO:GO:0008270 eggNOG:NOG75133
OrthoDB:EOG466VM2 GeneTree:ENSGT00530000063869 EMBL:CR559930
EMBL:BC134929 IPI:IPI00613229 RefSeq:NP_001082984.1
UniGene:Dr.42370 Ensembl:ENSDART00000114473 GeneID:100037363
KEGG:dre:100037363 HOGENOM:HOG000206390 HOVERGEN:HBG098843
OMA:ILIPCEF NextBio:20788527 Uniprot:A4IG51
Length = 565
Score = 167 (63.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 35/93 (37%), Positives = 49/93 (52%)
Query: 11 HAFEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTEL 70
HA EQ C +C +E+ L H+ C R+V C FC+ L + EH+E CG RTE
Sbjct: 55 HAEEQ--C-KCGLKIEKRFLETHQRSECSHRLVPCQFCDLELASFQAKEHEEYCGTRTEP 111
Query: 71 CHLCNRYIRLRERYNHESRCTGV-PENTVGSSR 102
C +C + LRE++ H + C + P SSR
Sbjct: 112 CPVCKCNVMLREQHIHPALCGSLTPPEERHSSR 144
>UNIPROTKB|F8VNX8 [details] [associations]
symbol:TRAFD1 "TRAF-type zinc finger domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0034097 "response to cytokine stimulus" evidence=IEA]
[GO:0045824 "negative regulation of innate immune response"
evidence=IEA] InterPro:IPR015880 SMART:SM00355 GO:GO:0008270
GO:GO:0034097 GO:GO:0005622 GO:GO:0045824 EMBL:AC073575
HGNC:HGNC:24808 ChiTaRS:TRAFD1 IPI:IPI01022706
ProteinModelPortal:F8VNX8 SMR:F8VNX8 Ensembl:ENST00000552896
UCSC:uc009zwb.2 ArrayExpress:F8VNX8 Bgee:F8VNX8 Uniprot:F8VNX8
Length = 283
Score = 160 (61.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
QV C +C++ +E+ +L H+ CP R+ C C+ L + L EH++ CG RTELC C
Sbjct: 61 QVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNC 119
Query: 75 NRYIRLRERYNHESRC 90
R + +++ H C
Sbjct: 120 GRNVLVKDLKTHPEVC 135
>RGD|620171 [details] [associations]
symbol:Trafd1 "TRAF type zinc finger domain containing 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034097 "response to cytokine stimulus"
evidence=IEP] [GO:0045824 "negative regulation of innate immune
response" evidence=IEA;ISO;ISS] InterPro:IPR001293
InterPro:IPR015880 PROSITE:PS50145 SMART:SM00355 RGD:620171
GO:GO:0046872 GO:GO:0008270 GO:GO:0034097 GO:GO:0005622
GO:GO:0045824 HOVERGEN:HBG094084 eggNOG:NOG75133
HOGENOM:HOG000154674 OrthoDB:EOG466VM2 EMBL:AABR03082041
EMBL:BC088344 EMBL:AF329825 IPI:IPI00765398 IPI:IPI00829457
UniGene:Rn.16272 ProteinModelPortal:Q99MM4 SMR:Q99MM4 STRING:Q99MM4
PhosphoSite:Q99MM4 PRIDE:Q99MM4 UCSC:RGD:620171 InParanoid:Q99MM4
Genevestigator:Q99MM4 Uniprot:Q99MM4
Length = 576
Score = 166 (63.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
QV C +C++ +E+ L H CP R+ C C+ L V L EH++ CG RTELC C
Sbjct: 61 QVTC-KCNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSC 119
Query: 75 NRYIRLRERYNHESRCTGVPE 95
R + ++E H + C V E
Sbjct: 120 GRNVLVKELQTHPAVCGRVEE 140
>UNIPROTKB|Q99MM4 [details] [associations]
symbol:Trafd1 "TRAF-type zinc finger domain-containing
protein 1" species:10116 "Rattus norvegicus" [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001293 InterPro:IPR015880 PROSITE:PS50145
SMART:SM00355 RGD:620171 GO:GO:0046872 GO:GO:0008270 GO:GO:0034097
GO:GO:0005622 GO:GO:0045824 HOVERGEN:HBG094084 eggNOG:NOG75133
HOGENOM:HOG000154674 OrthoDB:EOG466VM2 EMBL:AABR03082041
EMBL:BC088344 EMBL:AF329825 IPI:IPI00765398 IPI:IPI00829457
UniGene:Rn.16272 ProteinModelPortal:Q99MM4 SMR:Q99MM4 STRING:Q99MM4
PhosphoSite:Q99MM4 PRIDE:Q99MM4 UCSC:RGD:620171 InParanoid:Q99MM4
Genevestigator:Q99MM4 Uniprot:Q99MM4
Length = 576
Score = 166 (63.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
QV C +C++ +E+ L H CP R+ C C+ L V L EH++ CG RTELC C
Sbjct: 61 QVTC-KCNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSC 119
Query: 75 NRYIRLRERYNHESRCTGVPE 95
R + ++E H + C V E
Sbjct: 120 GRNVLVKELQTHPAVCGRVEE 140
>MGI|MGI:1923551 [details] [associations]
symbol:Trafd1 "TRAF type zinc finger domain containing 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0045824 "negative regulation of innate
immune response" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001293 InterPro:IPR015880 PROSITE:PS50145
SMART:SM00355 MGI:MGI:1923551 GO:GO:0046872 GO:GO:0008270
GO:GO:0034097 GO:GO:0005622 GO:GO:0045824 CTD:10906
HOVERGEN:HBG094084 eggNOG:NOG75133 HOGENOM:HOG000154674 OMA:HEETECP
OrthoDB:EOG466VM2 EMBL:AK150038 EMBL:BC038396 IPI:IPI00229315
IPI:IPI00828907 RefSeq:NP_001156942.1 RefSeq:NP_758479.2
UniGene:Mm.20488 ProteinModelPortal:Q3UDK1 SMR:Q3UDK1 IntAct:Q3UDK1
STRING:Q3UDK1 PhosphoSite:Q3UDK1 PaxDb:Q3UDK1 PRIDE:Q3UDK1
Ensembl:ENSMUST00000042312 Ensembl:ENSMUST00000120784 GeneID:231712
KEGG:mmu:231712 UCSC:uc008ziy.2 UCSC:uc008ziz.2
GeneTree:ENSGT00530000063869 InParanoid:Q3UDK1 NextBio:380715
Bgee:Q3UDK1 CleanEx:MM_TRAFD1 Genevestigator:Q3UDK1 Uniprot:Q3UDK1
Length = 580
Score = 165 (63.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
QV C +C++ +E+ L H CP R+ C C+ L V L EH++ CG RTELC C
Sbjct: 61 QVTC-KCNKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSC 119
Query: 75 NRYIRLRERYNHESRCTGVPE 95
R + ++E H C V E
Sbjct: 120 GRNVLVKELKTHPEVCGRVEE 140
>UNIPROTKB|B4DI89 [details] [associations]
symbol:TRAFD1 "TRAF-type zinc finger domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR015880 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
EMBL:AC073575 UniGene:Hs.5148 HGNC:HGNC:24808 ChiTaRS:TRAFD1
EMBL:AK295474 IPI:IPI00908631 SMR:B4DI89 STRING:B4DI89
Ensembl:ENST00000552890 HOGENOM:HOG000202836 Uniprot:B4DI89
Length = 164
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
QV C +C++ +E+ +L H+ CP R+ C C+ L + L EH++ CG RTELC C
Sbjct: 61 QVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNC 119
Query: 75 NRYIRLRERYNH 86
R + +++ H
Sbjct: 120 GRNVLVKDLKTH 131
>UNIPROTKB|Q58D05 [details] [associations]
symbol:TRAFD1 "TRAF-type zinc finger domain-containing
protein 1" species:9913 "Bos taurus" [GO:0045824 "negative
regulation of innate immune response" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR015880 PROSITE:PS50145 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 GO:GO:0045824
EMBL:BT021792 EMBL:BC123486 IPI:IPI00703971 IPI:IPI00829539
RefSeq:NP_001014908.1 UniGene:Bt.55490 ProteinModelPortal:Q58D05
SMR:Q58D05 PRIDE:Q58D05 GeneID:512642 KEGG:bta:512642 CTD:10906
HOVERGEN:HBG094084 NextBio:20870483 Uniprot:Q58D05
Length = 580
Score = 160 (61.4 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 32/102 (31%), Positives = 51/102 (50%)
Query: 15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
QV C +C++ +E+ L H+ CP R+ C C+ L + L +H++ CG RTELC C
Sbjct: 61 QVTC-KCNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHEDYCGARTELCGTC 119
Query: 75 NRYIRLRERYNHESRC-TGVPENTVGSSRNVRAAESDQGAHR 115
R + +++ H C V E V ++ A + G R
Sbjct: 120 GRNVLVKDLKTHPEVCGRDVEEKRVEAAMPPNAYDESWGPDR 161
>UNIPROTKB|O14545 [details] [associations]
symbol:TRAFD1 "TRAF-type zinc finger domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0034097 "response to cytokine stimulus" evidence=IEA]
[GO:0045824 "negative regulation of innate immune response"
evidence=ISS] InterPro:IPR015880 PROSITE:PS50145 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0034097 GO:GO:0005622
GO:GO:0045824 CTD:10906 HOVERGEN:HBG094084 EMBL:AB007447
EMBL:BC003553 EMBL:AK291331 IPI:IPI00009146 RefSeq:NP_001137378.1
RefSeq:NP_006691.1 UniGene:Hs.5148 PDB:2D9K PDBsum:2D9K
ProteinModelPortal:O14545 SMR:O14545 IntAct:O14545 STRING:O14545
PhosphoSite:O14545 PaxDb:O14545 PeptideAtlas:O14545 PRIDE:O14545
DNASU:10906 Ensembl:ENST00000257604 Ensembl:ENST00000412615
GeneID:10906 KEGG:hsa:10906 UCSC:uc001tto.3 GeneCards:GC12P112563
HGNC:HGNC:24808 HPA:HPA039254 HPA:HPA039266 MIM:613197
neXtProt:NX_O14545 PharmGKB:PA142670704 eggNOG:NOG75133
HOGENOM:HOG000154674 InParanoid:O14545 OMA:HEETECP
OrthoDB:EOG466VM2 PhylomeDB:O14545 ChiTaRS:TRAFD1
EvolutionaryTrace:O14545 GenomeRNAi:10906 NextBio:41423
ArrayExpress:O14545 Bgee:O14545 CleanEx:HS_TRAFD1
Genevestigator:O14545 Uniprot:O14545
Length = 582
Score = 160 (61.4 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
QV C +C++ +E+ +L H+ CP R+ C C+ L + L EH++ CG RTELC C
Sbjct: 61 QVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNC 119
Query: 75 NRYIRLRERYNHESRC 90
R + +++ H C
Sbjct: 120 GRNVLVKDLKTHPEVC 135
>UNIPROTKB|Q4R970 [details] [associations]
symbol:TRAFD1 "TRAF-type zinc finger domain-containing
protein 1" species:9541 "Macaca fascicularis" [GO:0045824 "negative
regulation of innate immune response" evidence=ISS]
InterPro:IPR015880 PROSITE:PS50145 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 GO:GO:0045824 HOVERGEN:HBG094084
EMBL:AB168226 ProteinModelPortal:Q4R970 SMR:Q4R970 Uniprot:Q4R970
Length = 582
Score = 160 (61.4 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
QV C +C++ +E+ +L H+ CP R+ C C+ L + L EH++ CG RTELC C
Sbjct: 61 QVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNC 119
Query: 75 NRYIRLRERYNHESRC 90
R + +++ H C
Sbjct: 120 GRNVLVKDLKTHPEVC 135
>UNIPROTKB|E1BXU9 [details] [associations]
symbol:XAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 PROSITE:PS50145 GO:GO:0008270
GeneTree:ENSGT00530000063869 EMBL:AADN02025673 IPI:IPI00819108
Ensembl:ENSGALT00000038884 Uniprot:E1BXU9
Length = 164
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 18 CSQCSETMEREILAIHKGE------NCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELC 71
CS+C E + R+ + H+ E C +R + C CE +P L EH C +RTE C
Sbjct: 34 CSECDEPVARKDMKDHQTEAHKQTKECHKRAMKCKICELEMPFNKLQEHLNTCASRTERC 93
Query: 72 HLCNRYIRLRERYNHESRCTGVPEN 96
CN+Y+ +++ H+ C +N
Sbjct: 94 WECNKYVMYKDQKKHKDICQNSEKN 118
>UNIPROTKB|E2RS24 [details] [associations]
symbol:TRAFD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045824 "negative regulation of innate immune
response" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR015880 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
GO:GO:0045824 CTD:10906 OMA:HEETECP GeneTree:ENSGT00530000063869
EMBL:AAEX03014677 RefSeq:XP_534682.2 Ensembl:ENSCAFT00000014027
GeneID:477484 KEGG:cfa:477484 Uniprot:E2RS24
Length = 583
Score = 153 (58.9 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
QV C +C++ +E+ L H+ CP R+ C C+ L + L +H++ CG RTELC C
Sbjct: 61 QVTC-KCNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHEDYCGARTELCGSC 119
Query: 75 NRYIRLRERYNHESRC 90
R + +++ H C
Sbjct: 120 GRNVLVKDLKTHPEVC 135
>UNIPROTKB|I3L509 [details] [associations]
symbol:XAF1 "XIAP-associated factor 1" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 PROSITE:PS50145 GO:GO:0008270 HGNC:HGNC:30932
ChiTaRS:XAF1 EMBL:AC034305 ProteinModelPortal:I3L509 SMR:I3L509
Ensembl:ENST00000572546 Bgee:I3L509 Uniprot:I3L509
Length = 145
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 29/81 (35%), Positives = 38/81 (46%)
Query: 16 VACSQCSE-----TMEREILAIHKGEN-CPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTE 69
V C +C E TME H+ N C +R V C FC+ + L H+ CG+RTE
Sbjct: 32 VLCPECEEPVPKETMEEHCKLEHQQANECQERPVECKFCKLDMQLSKLELHESYCGSRTE 91
Query: 70 LCHLCNRYIRLRERYNHESRC 90
LC C ++I R H C
Sbjct: 92 LCQGCGQFIMHRMLAQHRDVC 112
>UNIPROTKB|E1BQZ6 [details] [associations]
symbol:TRAFD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0045824 "negative regulation of innate immune
response" evidence=IEA] GO:GO:0045824 GeneTree:ENSGT00530000063869
OMA:EDHETSA EMBL:AADN02034931 EMBL:AADN02034932 EMBL:AADN02034933
EMBL:AADN02034934 IPI:IPI00821864 Ensembl:ENSGALT00000007665
ArrayExpress:E1BQZ6 Uniprot:E1BQZ6
Length = 563
Score = 139 (54.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 34/101 (33%), Positives = 47/101 (46%)
Query: 15 QVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLC 74
QV C +CS +E+ +L H+ CP R C C+ L L +H+ CG RTE+C C
Sbjct: 60 QVTC-KCSMKVEKSLLEDHETSACPLRPAVCQHCDIQLTFNKLQDHESYCGARTEMCSGC 118
Query: 75 NRYIRLRERYNHESRCTGVPENTVGSSRNVRAAES-DQGAH 114
I +++ H C G V S+ V E D G H
Sbjct: 119 GLNIMVKDLKEHPQVC-GKEAKRV--SKTVPHFEGEDAGLH 156
>UNIPROTKB|C9K044 [details] [associations]
symbol:XAF1 "XIAP-associated factor 1" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 PROSITE:PS50145 GO:GO:0008270
HOGENOM:HOG000154869 HGNC:HGNC:30932 ChiTaRS:XAF1 OrthoDB:EOG4MGS7S
EMBL:AC034305 IPI:IPI00952596 ProteinModelPortal:C9K044 SMR:C9K044
STRING:C9K044 Ensembl:ENST00000441631 ArrayExpress:C9K044
Bgee:C9K044 Uniprot:C9K044
Length = 301
Score = 129 (50.5 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 27/93 (29%), Positives = 41/93 (44%)
Query: 34 KGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTGV 93
K C +R V C FC+ + L H+ CG+RTELC C ++I R H C
Sbjct: 75 KANECQERPVECKFCKLDMQLSKLELHESYCGSRTELCQGCGQFIMHRMLAQHRDVCRS- 133
Query: 94 PENTVGSSRNVRAAESDQGAHRRPAPPPPNEFY 126
+ +G + A E + H P N+++
Sbjct: 134 EQAQLGKGERISAPEREIYCHYCNQMIPENKYF 166
>TAIR|locus:2130120 [details] [associations]
symbol:AT4G15420 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR004854 InterPro:IPR015880 Pfam:PF03152 SMART:SM00355
EMBL:CP002687 GO:GO:0008270 GO:GO:0005622 GO:GO:0006511
InterPro:IPR007280 Pfam:PF04151 PANTHER:PTHR12555 EMBL:AF446353
EMBL:AY086035 EMBL:AY143927 EMBL:DQ778953 IPI:IPI00544100
RefSeq:NP_567465.1 UniGene:At.4344 UniGene:At.71880
ProteinModelPortal:Q8W1E7 SMR:Q8W1E7 STRING:Q8W1E7 PRIDE:Q8W1E7
EnsemblPlants:AT4G15420.1 GeneID:827213 KEGG:ath:AT4G15420
InParanoid:Q8W1E7 OMA:FHEPLQC ProtClustDB:PLN03086
Genevestigator:Q8W1E7 Uniprot:Q8W1E7
Length = 561
Score = 126 (49.4 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 14 EQVACSQCSETMEREILAIHKGENCPQRIVTCDFC----EFPLPAVD-------LAEHQE 62
E + C C +E+E + H+G++CP R++ C FC E A D ++EH+
Sbjct: 470 EPLTCG-CGIVLEKEQMVQHQGKDCPLRLIACRFCGDMVEAGNSAADTRDRMRGMSEHES 528
Query: 63 VCGNRTELCHLCNRYIRLRERYNHE 87
CG+RT C C R + L++ H+
Sbjct: 529 TCGSRTAPCDSCGRSVMLKDMDIHQ 553
>UNIPROTKB|E1C626 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0002726 "positive
regulation of T cell cytokine production" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0009898 "internal side of plasma membrane" evidence=IEA]
[GO:0019886 "antigen processing and presentation of exogenous
peptide antigen via MHC class II" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA] [GO:0035631
"CD40 receptor complex" evidence=IEA] [GO:0042088 "T-helper 1 type
immune response" evidence=IEA] [GO:0042102 "positive regulation of
T cell proliferation" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043011 "myeloid dendritic
cell differentiation" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0045084 "positive regulation of interleukin-12 biosynthetic
process" evidence=IEA] [GO:0045410 "positive regulation of
interleukin-6 biosynthetic process" evidence=IEA] [GO:0045453 "bone
resorption" evidence=IEA] [GO:0045672 "positive regulation of
osteoclast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IEA]
[GO:0002218 "activation of innate immune response" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling
pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=TAS] [GO:0034146 "toll-like receptor 5 signaling
pathway" evidence=TAS] [GO:0034154 "toll-like receptor 7 signaling
pathway" evidence=TAS] [GO:0035419 "activation of MAPK activity
involved in innate immune response" evidence=TAS] [GO:0035681
"toll-like receptor 15 signaling pathway" evidence=TAS] [GO:0035682
"toll-like receptor 21 signaling pathway" evidence=TAS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 Pfam:PF13639 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 GO:GO:0005829 GO:GO:0048471 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0035419 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0042102 GO:GO:0004842 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0002755
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0007249
Reactome:REACT_102124 SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0045672
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 Reactome:REACT_147795 GO:GO:0035681 GO:GO:0034146
GO:GO:2000679 GO:GO:0045084 GO:GO:0035682 GO:GO:0034154
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359
OMA:SEAPIRQ PANTHER:PTHR10131:SF48 EMBL:AADN02033086
IPI:IPI00571717 Ensembl:ENSGALT00000012888 Uniprot:E1C626
Length = 548
Score = 116 (45.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 25/89 (28%), Positives = 37/89 (41%)
Query: 8 YSLHA-FEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGN 66
+ LH F V C QC ++ L H + CP+R V C C + D H + C
Sbjct: 154 HQLHCDFTTVECPQCQGAFQKNHLKEHMTQECPRRQVCCPNCATSMAYEDKELHDQTCPL 213
Query: 67 RTELCHLCNRYIRLRERYNH-ESRCTGVP 94
C CN + ++ NH ++ C P
Sbjct: 214 ANVFCEYCNTMLIRQQMPNHYDNDCPTAP 242
>UNIPROTKB|Q28DL4 [details] [associations]
symbol:traf6 "TNF receptor-associated factor 6"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248
KO:K03175 PANTHER:PTHR10131:SF48 EMBL:CR855449 EMBL:BC082342
RefSeq:NP_001008162.2 UniGene:Str.8271 ProteinModelPortal:Q28DL4
SMR:Q28DL4 STRING:Q28DL4 GeneID:493524 KEGG:xtr:493524
Xenbase:XB-GENE-480628 InParanoid:Q641J5 Uniprot:Q28DL4
Length = 558
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/84 (32%), Positives = 37/84 (44%)
Query: 13 FEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCH 72
F V CSQC + + L HK E CP+R + C+ C + D H + C C
Sbjct: 159 FAGVECSQCQSSFPKYSLQKHKFEECPRRQIFCENCAVAMALEDKLNHDQTCPLAYVTCE 218
Query: 73 LCNRYIRLRERYN-HESR-CTGVP 94
C + +RE+ H S CT P
Sbjct: 219 YCQTNL-IREQMPAHYSMDCTMAP 241
>MGI|MGI:3772572 [details] [associations]
symbol:Xaf1 "XIAP associated factor 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0031333 "negative
regulation of protein complex assembly" evidence=ISO] [GO:0035456
"response to interferon-beta" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] PROSITE:PS50145 MGI:MGI:3772572
GO:GO:0005739 GO:GO:0005634 GO:GO:0006915 GO:GO:0046872
EMBL:AL929071 GeneTree:ENSGT00530000063869 CTD:54739
eggNOG:NOG87143 HOGENOM:HOG000154869 HOVERGEN:HBG108681 OMA:CAMCQQS
EMBL:AK140315 IPI:IPI00380900 IPI:IPI00919016 RefSeq:NP_001032802.2
UniGene:Mm.291131 ProteinModelPortal:Q5NBU8 SMR:Q5NBU8
STRING:Q5NBU8 PhosphoSite:Q5NBU8 PRIDE:Q5NBU8 DNASU:327959
Ensembl:ENSMUST00000140842 Ensembl:ENSMUST00000146233
Ensembl:ENSMUST00000151440 GeneID:327959 KEGG:mmu:327959
UCSC:uc007jyr.2 OrthoDB:EOG4MGS7S NextBio:398041 Bgee:Q5NBU8
Genevestigator:Q5NBU8 Uniprot:Q5NBU8
Length = 273
Score = 112 (44.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 28/89 (31%), Positives = 42/89 (47%)
Query: 16 VACSQCSET-----MEREILAIHKG-ENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTE 69
V C +C E M+ + +H+ + Q C FCE + +L H+ CG+RTE
Sbjct: 32 VLCPECEEPIPESKMKEHMEVVHQQTKESQQHPAKCKFCELAVQLSNLDVHESHCGSRTE 91
Query: 70 LCHLCNRYIRLRERYNHESRCT---GVPE 95
C CN+ I L+ H++ C G PE
Sbjct: 92 HCPHCNQPITLQVLSQHKAMCLSAKGRPE 120
>RGD|1585988 [details] [associations]
symbol:XAF1 "XIAP associated factor-1" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0031333 "negative regulation of protein
complex assembly" evidence=IDA] [GO:0035456 "response to
interferon-beta" evidence=ISO] NCBI:XP_001053682
REFSEQ:XM_001053682
Length = 326
Score = 111 (44.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 26/81 (32%), Positives = 38/81 (46%)
Query: 16 VACSQCSET-----MEREILAIHKG-ENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTE 69
V C +C E M+ + A+H+ + Q C FCE + L H+ CG+RTE
Sbjct: 32 VLCPECEEPIPESKMKEHVEAVHQQTKESQQDPAECKFCELAVQLSKLDVHEYHCGSRTE 91
Query: 70 LCHLCNRYIRLRERYNHESRC 90
C CN+ + LR H+ C
Sbjct: 92 HCPHCNQRVILRVLAQHKDLC 112
>UNIPROTKB|Q9Y4K3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IEA] [GO:0030316 "osteoclast differentiation"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0042088 "T-helper 1 type immune response" evidence=IEA]
[GO:0042102 "positive regulation of T cell proliferation"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0043011 "myeloid dendritic cell
differentiation" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0048661 "positive
regulation of smooth muscle cell proliferation" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0070498 "interleukin-1-mediated signaling pathway"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0051865 "protein
autoubiquitination" evidence=IDA;TAS] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IMP] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IMP]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IMP] [GO:0050870 "positive regulation of T cell
activation" evidence=IC] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=EXP;IDA;TAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IMP;TAS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IMP;IDA;TAS] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0043422 "protein kinase B binding" evidence=IPI]
[GO:0070534 "protein K63-linked ubiquitination" evidence=IGI;IDA]
[GO:0043507 "positive regulation of JUN kinase activity"
evidence=IDA;NAS] [GO:0070555 "response to interleukin-1"
evidence=IDA] [GO:0032147 "activation of protein kinase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IDA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IDA;TAS] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IPI] [GO:0047485
"protein N-terminus binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031996 "thioesterase
binding" evidence=IPI] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0000187 "activation of MAPK activity" evidence=TAS] [GO:0002224
"toll-like receptor signaling pathway" evidence=TAS] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=TAS]
[GO:0007254 "JNK cascade" evidence=TAS] [GO:0008063 "Toll signaling
pathway" evidence=TAS] [GO:0010008 "endosome membrane"
evidence=TAS] [GO:0031293 "membrane protein intracellular domain
proteolysis" evidence=TAS] [GO:0034130 "toll-like receptor 1
signaling pathway" evidence=TAS] [GO:0034134 "toll-like receptor 2
signaling pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3
signaling pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4
signaling pathway" evidence=TAS] [GO:0035666 "TRIF-dependent
toll-like receptor signaling pathway" evidence=TAS] [GO:0035872
"nucleotide-binding domain, leucine rich repeat containing receptor
signaling pathway" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0051403 "stress-activated MAPK
cascade" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;NAS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0009898 "internal side of plasma
membrane" evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=NAS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IDA]
[GO:0035631 "CD40 receptor complex" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] Reactome:REACT_6782 InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005938 GO:GO:0048471 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway
Pathway_Interaction_DB:cd8tcrpathway EMBL:CH471064 GO:GO:0042981
Pathway_Interaction_DB:tcrpathway GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 Pathway_Interaction_DB:bcr_5pathway GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0045087
GO:GO:0000187 GO:GO:0010008 GO:GO:0000122 GO:GO:0031293
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0031398
GO:GO:0070555 GO:GO:0004842 GO:GO:0001503 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0048468
GO:GO:0051865 GO:GO:0002755 GO:GO:0008063 GO:GO:0034130
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
Pathway_Interaction_DB:nfkappabcanonicalpathway
Pathway_Interaction_DB:p38_mkk3_6pathway GO:GO:0007249
SUPFAM:SSF49599 GO:GO:0043011 GO:GO:0050870 GO:GO:0035631
Pathway_Interaction_DB:p38alphabetapathway GO:GO:0045672
GO:GO:0030316 GO:GO:0070423 Pathway_Interaction_DB:il1pathway
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AC009656 PDB:1LB6 PDBsum:1LB6 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:U78798
EMBL:AY228337 EMBL:AK292978 EMBL:AC061999 EMBL:BC031052
IPI:IPI00743663 PIR:S71821 RefSeq:NP_004611.1 RefSeq:NP_665802.1
UniGene:Hs.444172 UniGene:Hs.591983 PDB:1LB4 PDB:1LB5 PDB:2ECI
PDB:2JMD PDB:3HCS PDB:3HCT PDB:3HCU PDBsum:1LB4 PDBsum:1LB5
PDBsum:2ECI PDBsum:2JMD PDBsum:3HCS PDBsum:3HCT PDBsum:3HCU
ProteinModelPortal:Q9Y4K3 SMR:Q9Y4K3 DIP:DIP-27515N IntAct:Q9Y4K3
MINT:MINT-88585 STRING:Q9Y4K3 PhosphoSite:Q9Y4K3 DMDM:30580642
PaxDb:Q9Y4K3 PRIDE:Q9Y4K3 DNASU:7189 Ensembl:ENST00000348124
Ensembl:ENST00000526995 GeneID:7189 KEGG:hsa:7189 UCSC:uc001mwq.2
GeneCards:GC11M036467 HGNC:HGNC:12036 HPA:CAB004605 HPA:HPA019805
HPA:HPA020599 MIM:602355 neXtProt:NX_Q9Y4K3 PharmGKB:PA36713
InParanoid:Q9Y4K3 PhylomeDB:Q9Y4K3 ChiTaRS:Traf6
EvolutionaryTrace:Q9Y4K3 GenomeRNAi:7189 NextBio:28192 Bgee:Q9Y4K3
CleanEx:HS_TRAF6 Genevestigator:Q9Y4K3 GermOnline:ENSG00000175104
Uniprot:Q9Y4K3
Length = 522
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 13 FEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCH 72
F + C QC ++ + IH ++CP+R V+CD C + D H + C +C
Sbjct: 157 FALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEIHDQNCPLANVICE 216
Query: 73 LCNRYIRLRERY-NH-ESRCTGVP 94
CN I +RE+ NH + C P
Sbjct: 217 YCNT-ILIREQMPNHYDLDCPTAP 239
>UNIPROTKB|B6CJY4 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9531 "Cercocebus atys" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005938 GO:GO:0005634
GO:GO:0007165 GO:GO:0042981 GO:GO:0005811 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599 HOVERGEN:HBG060248
PANTHER:PTHR10131:SF48 EMBL:EU204928 ProteinModelPortal:B6CJY4
Uniprot:B6CJY4
Length = 522
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 13 FEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCH 72
F V C QC ++ + IH ++CP+R V+CD C + D H + C +C
Sbjct: 157 FALVDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAALVAFEDKEIHDQNCPLANVICE 216
Query: 73 LCNRYIRLRERY-NH-ESRCTGVP 94
CN I +RE+ NH + C P
Sbjct: 217 YCNT-ILIREQMPNHYDLDCPTAP 239
>UNIPROTKB|B6CJY5 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9544 "Macaca mulatta" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005886 GO:GO:0005938 GO:GO:0048471
GO:GO:0042981 GO:GO:0050852 GO:GO:0005811 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0070555 GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907
GO:GO:0070534 SUPFAM:SSF49599 GO:GO:0045672 GO:GO:0032743
GO:GO:0043507 GO:GO:2000679 GO:GO:0002726 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
PANTHER:PTHR10131:SF48 EMBL:EU204929 RefSeq:NP_001129268.1
UniGene:Mmu.17706 STRING:B6CJY5 GeneID:716907 KEGG:mcc:716907
NextBio:19981456 Uniprot:B6CJY5
Length = 522
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 13 FEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCH 72
F V C QC ++ + IH ++CP+R V+CD C + D H + C +C
Sbjct: 157 FALVDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAALVAFEDKEIHDQNCPLANVICE 216
Query: 73 LCNRYIRLRERY-NH-ESRCTGVP 94
CN I +RE+ NH + C P
Sbjct: 217 YCNT-ILIREQMPNHYDLDCPTAP 239
>UNIPROTKB|E1BW11 [details] [associations]
symbol:TRAF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001817 "regulation of cytokine production"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008063 "Toll signaling pathway" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0032088 "negative
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0033209 "tumor necrosis factor-mediated signaling
pathway" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0050688 "regulation of defense response to virus"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR027128
PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF45
EMBL:AADN02003763 EMBL:AADN02003761 EMBL:AADN02003762
IPI:IPI00570962 Ensembl:ENSGALT00000018576 Uniprot:E1BW11
Length = 378
Score = 108 (43.1 bits), Expect = 0.00020, P = 0.00020
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 13 FEQVAC--SQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEV-CGNRTE 69
FE++ C + C E + R+ L H + C R TC +C+ +P + L +H++ C
Sbjct: 142 FEELPCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCKSQVPMIMLQKHEDTDCPCVMV 201
Query: 70 LC-HLCNRYIRLRERYN-HESRCTGVP 94
C H C+ +R N H S C P
Sbjct: 202 SCPHKCSVKTLMRSELNAHLSECINAP 228
>RGD|1306853 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IEA;ISO] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005811
"lipid particle" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IMP] [GO:0006955 "immune response"
evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA;ISO] [GO:0007254 "JNK cascade" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0009898 "internal side of plasma
membrane" evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=IMP] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=IEA;ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030316
"osteoclast differentiation" evidence=IEA;ISO] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA;ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0031996
"thioesterase binding" evidence=IEA;ISO] [GO:0032147 "activation of
protein kinase activity" evidence=ISO] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA;ISO]
[GO:0035631 "CD40 receptor complex" evidence=IEA;ISO] [GO:0042088
"T-helper 1 type immune response" evidence=IEA;ISO] [GO:0042102
"positive regulation of T cell proliferation" evidence=IEA;ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA;ISO] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043234 "protein
complex" evidence=IMP] [GO:0043422 "protein kinase B binding"
evidence=IEA;ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA;ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA;ISO] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA;ISO] [GO:0045453 "bone resorption" evidence=IEA;ISO]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0046849 "bone remodeling" evidence=ISO]
[GO:0047485 "protein N-terminus binding" evidence=IEA;ISO]
[GO:0048468 "cell development" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048661
"positive regulation of smooth muscle cell proliferation"
evidence=IMP] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA;ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IEA;ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;ISS]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
RGD:1306853 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0043234 GO:GO:0006461 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 EMBL:CH473949 GO:GO:0045672
GO:GO:0030316 GO:GO:0032743 GO:GO:0051023 GO:GO:0043507
GO:GO:0070498 GO:GO:0045410 GO:GO:2000679 GO:GO:0045084
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:BC168921
IPI:IPI00363697 RefSeq:NP_001101224.1 UniGene:Rn.220435
ProteinModelPortal:B5DF45 STRING:B5DF45 PhosphoSite:B5DF45
Ensembl:ENSRNOT00000006148 GeneID:311245 KEGG:rno:311245
UCSC:RGD:1306853 NextBio:663249 Genevestigator:B5DF45
Uniprot:B5DF45
Length = 530
Score = 109 (43.4 bits), Expect = 0.00024, P = 0.00024
Identities = 27/90 (30%), Positives = 42/90 (46%)
Query: 8 YSLHA-FEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGN 66
+ +H F V C QC ++ + H E+CP+R V+C C P+P + H + C
Sbjct: 151 HQVHCEFALVICPQCQRFFQKCQINKHIIEDCPRRQVSCVNCAVPMPYEEKEIHDQSCPL 210
Query: 67 RTELCHLCNRYIRLRERY-NH-ESRCTGVP 94
+C C I +RE+ NH + C P
Sbjct: 211 ANIICEYCGT-ILIREQMPNHYDLDCPTAP 239
>UNIPROTKB|Q3ZCC3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9913 "Bos taurus" [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0045410 "positive regulation of interleukin-6 biosynthetic
process" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0042102 "positive regulation of T cell
proliferation" evidence=IEA] [GO:0042088 "T-helper 1 type immune
response" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0032743 "positive regulation of interleukin-2
production" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031666 "positive regulation of lipopolysaccharide-mediated
signaling pathway" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=IEA] [GO:0009898 "internal side of plasma
membrane" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0007249
"I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0042981 GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 GO:GO:0005811 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0031965 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 GeneTree:ENSGT00550000074359 EMBL:DQ319074
EMBL:DQ407276 EMBL:BC102522 IPI:IPI00710621 RefSeq:NP_001029833.1
UniGene:Bt.89201 ProteinModelPortal:Q3ZCC3 SMR:Q3ZCC3 STRING:Q3ZCC3
PRIDE:Q3ZCC3 Ensembl:ENSBTAT00000021630 GeneID:539124
KEGG:bta:539124 CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625
HOVERGEN:HBG060248 InParanoid:Q3ZCC3 KO:K03175 OMA:SEAPIRQ
OrthoDB:EOG4320XV NextBio:20877796 PANTHER:PTHR10131:SF48
Uniprot:Q3ZCC3
Length = 542
Score = 109 (43.4 bits), Expect = 0.00025, P = 0.00025
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 13 FEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCH 72
F ++C QC ++ L IH + CP+R V C+ C + D H++ C +C
Sbjct: 158 FALMSCPQCQRPFQKCHLNIHILKECPRRQVPCENCAVSMAFEDKEIHEQNCPLANVICE 217
Query: 73 LCNRYIRLRERY-NH-ESRCTGVP 94
CN + +RE+ NH + C P
Sbjct: 218 YCNTML-IREQMPNHYDLDCPTAP 240
>UNIPROTKB|F1NMN9 [details] [associations]
symbol:TRAF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008063 "Toll signaling pathway" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0002224 "toll-like receptor
signaling pathway" evidence=IEA] [GO:0009898 "internal side of
plasma membrane" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0030162 "regulation of proteolysis" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0031996 "thioesterase binding" evidence=IEA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0032648 "regulation of interferon-beta
production" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0035631 "CD40
receptor complex" evidence=IEA] [GO:0050688 "regulation of defense
response to virus" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027128
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907
SUPFAM:SSF49599 GO:GO:0002224 GO:GO:0035631 GO:GO:0050688
Gene3D:3.90.890.10 GO:GO:0032648 GeneTree:ENSGT00550000074359
OMA:YGCTFQG PANTHER:PTHR10131:SF45 EMBL:AADN02003763
EMBL:AADN02003761 EMBL:AADN02003762 IPI:IPI00820500
Ensembl:ENSGALT00000037491 Uniprot:F1NMN9
Length = 549
Score = 108 (43.1 bits), Expect = 0.00035, P = 0.00035
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 13 FEQVAC--SQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEV-CGNRTE 69
FE++ C + C E + R+ L H + C R TC +C+ +P + L +H++ C
Sbjct: 124 FEELPCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCKSQVPMIMLQKHEDTDCPCVMV 183
Query: 70 LC-HLCNRYIRLRERYN-HESRCTGVP 94
C H C+ +R N H S C P
Sbjct: 184 SCPHKCSVKTLMRSELNAHLSECINAP 210
>UNIPROTKB|E2RDE8 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070498 "interleukin-1-mediated signaling
pathway" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0046849 "bone remodeling" evidence=IEA] [GO:0045672 "positive
regulation of osteoclast differentiation" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF48
EMBL:AAEX03011373 Ensembl:ENSCAFT00000010962 OMA:CLMALRN
Uniprot:E2RDE8
Length = 562
Score = 108 (43.1 bits), Expect = 0.00036, P = 0.00036
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 8 YSLHA-FEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGN 66
+ LH F + C QC T ++ L IH + CP+R V+C C + D H + C
Sbjct: 151 HQLHCEFALMNCLQCQRTFQKCQLNIHILKECPRRQVSCMNCAALMAFEDKEIHDQNCPL 210
Query: 67 RTELCHLCNRYIRLRERY-NH-ESRCTGVP 94
+C CN + +RE+ NH + C P
Sbjct: 211 ANVICEYCNTML-IREQMPNHYDLDCPTAP 239
>UNIPROTKB|H0YL25 [details] [associations]
symbol:TRAF3 "TNF receptor-associated factor 3"
species:9606 "Homo sapiens" [GO:0001817 "regulation of cytokine
production" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008063 "Toll signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0033209 "tumor necrosis factor-mediated
signaling pathway" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0050688 "regulation of defense response
to virus" evidence=IEA] InterPro:IPR001293 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR027128 PROSITE:PS50145 GO:GO:0046872
GO:GO:0008270 GO:GO:0004842 EMBL:AL117209 SUPFAM:SSF49599
Gene3D:3.90.890.10 HGNC:HGNC:12033 ChiTaRS:TRAF3
PANTHER:PTHR10131:SF45 EMBL:AL132801 Ensembl:ENST00000558700
Bgee:H0YL25 Uniprot:H0YL25
Length = 207
Score = 102 (41.0 bits), Expect = 0.00044, P = 0.00044
Identities = 26/87 (29%), Positives = 40/87 (45%)
Query: 13 FEQVACSQ--CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEV-CGNRTE 69
FE++ C + C E + R+ L H + C R TC C+ +P + L +H++ C
Sbjct: 58 FEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVV 117
Query: 70 LC-HLCNRYIRLRERYN-HESRCTGVP 94
C H C+ LR + H S C P
Sbjct: 118 SCPHKCSVQTLLRSELSAHLSECVNAP 144
>UNIPROTKB|Q6DJN2 [details] [associations]
symbol:traf6-b "TNF receptor-associated factor 6-B"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:BC075143 RefSeq:NP_001086348.1 UniGene:Xl.29694
ProteinModelPortal:Q6DJN2 SMR:Q6DJN2 GeneID:444777 KEGG:xla:444777
CTD:444777 Xenbase:XB-GENE-865394 Uniprot:Q6DJN2
Length = 556
Score = 107 (42.7 bits), Expect = 0.00050, P = 0.00050
Identities = 25/84 (29%), Positives = 38/84 (45%)
Query: 13 FEQVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCH 72
F V CSQC + + L H C +R + CD C + D++ H+ +C C
Sbjct: 159 FASVECSQCQGSFPKSRLEKHMEHECGRRKIFCDNCGLAMAYEDMSGHELICPLAYVTCE 218
Query: 73 LCNRYIRLRERY-NHESR-CTGVP 94
C + +RE+ +H S CT P
Sbjct: 219 YCQTNL-IREQMPSHYSMDCTMAP 241
>DICTYBASE|DDB_G0290883 [details] [associations]
symbol:DDB_G0290883 "TRAF-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 Pfam:PF00917 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
dictyBase:DDB_G0290883 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF49599
eggNOG:NOG321306 ProtClustDB:CLSZ2429617 EMBL:AAFI02000171
RefSeq:XP_635511.1 ProteinModelPortal:Q54FG0
EnsemblProtists:DDB0238325 GeneID:8627878 KEGG:ddi:DDB_G0290883
OMA:HISECEN Uniprot:Q54FG0
Length = 460
Score = 106 (42.4 bits), Expect = 0.00057, P = 0.00057
Identities = 27/77 (35%), Positives = 35/77 (45%)
Query: 21 CSETMEREILAIHKGENCPQRIVTCDF--CEFPLPAVDLAEHQEVCGNRTELCHLCNRY- 77
C E +E + + H NC + VTC F CE L L HQ CG + +C C R
Sbjct: 130 CKEKIEVDQIDSHL-INCQYKFVTCSFKGCEKILRMNSLESHQNECGFKLVICDFCKRDD 188
Query: 78 IRLRERYNHESRCTGVP 94
I+ +E H C VP
Sbjct: 189 IKKKELETHYKTCPMVP 205
>ASPGD|ASPL0000066677 [details] [associations]
symbol:AN10877 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR004854
Pfam:PF03152 EMBL:BN001304 GO:GO:0006511 PANTHER:PTHR12555
EnsemblFungi:CADANIAT00000493 OMA:GIREFSA Uniprot:C8VCB5
Length = 756
Score = 107 (42.7 bits), Expect = 0.00074, P = 0.00074
Identities = 27/86 (31%), Positives = 37/86 (43%)
Query: 17 ACSQCS-ETMEREILAIHKGENCPQRIVTCDFCEFPLP---------------AVDLAEH 60
+C C E + LA H+ CP + + C FC +P L H
Sbjct: 468 SCRACGFEAEGLQHLAQHRTTVCPAKPILCSFCHLEVPQQGESDPDMHDPEVLVSGLTPH 527
Query: 61 QEVCGNRTELCHLCNRYIRLRERYNH 86
+ V G RT CHLCN+ +RLR+ H
Sbjct: 528 ELVDGGRTNECHLCNKIVRLRDMKTH 553
>UNIPROTKB|E1BBH2 [details] [associations]
symbol:TRAF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0032648 "regulation of interferon-beta
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0030162 "regulation of
proteolysis" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0009898 "internal side of plasma membrane"
evidence=IEA] [GO:0002224 "toll-like receptor signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008063 "Toll
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027128
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907
SUPFAM:SSF49599 GO:GO:0002224 GO:GO:0035631 GO:GO:0050688
Gene3D:3.90.890.10 GO:GO:0032648 GeneTree:ENSGT00550000074359
CTD:7187 KO:K03174 OMA:YGCTFQG PANTHER:PTHR10131:SF45
EMBL:DAAA02053290 IPI:IPI00716910 RefSeq:NP_001192515.1
UniGene:Bt.18290 Ensembl:ENSBTAT00000017918 GeneID:506182
KEGG:bta:506182 NextBio:20867485 Uniprot:E1BBH2
Length = 568
Score = 106 (42.4 bits), Expect = 0.00077, P = 0.00077
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 13 FEQVAC--SQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEV-CGNRTE 69
FE++ C + C E + R+ L H + C R TC C+ +P V L +H++ C
Sbjct: 143 FEELPCVRADCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMVTLQKHEDTECPCVAV 202
Query: 70 LC-HLCNRYIRLRERYN-HESRCTGVP 94
C H C+ LR + H S C P
Sbjct: 203 SCPHKCSVQTLLRSELSAHLSECVNAP 229
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.137 0.442 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 158 158 0.00085 106 3 11 22 0.44 31
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 572 (61 KB)
Total size of DFA: 160 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.05u 0.09s 18.14t Elapsed: 00:00:01
Total cpu time: 18.05u 0.09s 18.14t Elapsed: 00:00:01
Start: Sat May 11 04:59:09 2013 End: Sat May 11 04:59:10 2013