Query 031518
Match_columns 158
No_of_seqs 120 out of 754
Neff 6.7
Searched_HMMs 13730
Date Tue Mar 26 00:41:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031518.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031518hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1am9a_ a.38.1.1 (A:) SREBP-1a 99.5 3.5E-15 2.6E-19 99.8 5.7 54 3-56 12-67 (80)
2 d1uklc_ a.38.1.1 (C:) SREBP-2 99.5 1.6E-15 1.2E-19 96.7 2.4 49 9-57 1-51 (61)
3 d1nkpb_ a.38.1.1 (B:) Max prot 99.5 1.8E-14 1.3E-18 96.8 6.8 54 3-56 8-64 (83)
4 d1nlwa_ a.38.1.1 (A:) Mad prot 99.5 1.7E-14 1.3E-18 96.0 6.5 54 3-56 7-64 (79)
5 d1a0aa_ a.38.1.1 (A:) Pho4 B/H 99.5 9.4E-15 6.9E-19 93.6 3.8 46 3-48 8-61 (63)
6 d1mdya_ a.38.1.1 (A:) Myod B/H 99.5 1E-14 7.5E-19 94.8 3.7 47 3-49 18-67 (68)
7 d1nkpa_ a.38.1.1 (A:) Myc prot 99.5 5.3E-14 3.8E-18 95.4 6.8 54 3-56 12-69 (88)
8 d1an4a_ a.38.1.1 (A:) Usf B/HL 99.3 2.4E-13 1.7E-17 87.4 3.1 45 3-47 11-62 (65)
9 d1zpva1 d.58.18.7 (A:1-83) UPF 97.7 0.00042 3.1E-08 44.6 11.4 68 80-151 3-70 (83)
10 d1u8sa1 d.58.18.5 (A:2-87) put 97.3 0.0016 1.1E-07 42.2 9.6 67 78-149 4-70 (86)
11 d1u8sa2 d.58.18.5 (A:88-180) p 97.0 0.0071 5.2E-07 39.4 10.9 68 80-152 7-83 (93)
12 d1y7pa2 d.58.18.12 (A:2-78) Hy 95.5 0.0088 6.4E-07 37.8 4.6 35 81-116 3-37 (77)
13 d2f06a1 d.58.18.11 (A:71-141) 95.5 0.089 6.5E-06 32.4 9.2 44 82-126 2-45 (71)
14 d2f06a2 d.58.18.11 (A:1-70) Hy 95.4 0.099 7.2E-06 32.3 9.4 45 81-126 5-49 (70)
15 d1sc6a3 d.58.18.1 (A:327-410) 93.5 0.46 3.4E-05 29.7 9.4 47 79-126 11-57 (84)
16 d2fgca2 d.58.18.6 (A:27-104) A 90.5 0.54 3.9E-05 29.5 6.8 62 80-146 4-67 (78)
17 d1ygya3 d.58.18.1 (A:452-529) 88.4 1.7 0.00012 26.6 8.5 38 78-116 2-39 (78)
18 d1phza1 d.58.18.3 (A:19-115) P 86.9 1.1 7.8E-05 29.0 6.5 68 80-152 17-85 (97)
19 d2f1fa1 d.58.18.6 (A:2-77) Ace 86.7 0.85 6.2E-05 28.4 5.7 45 81-126 3-49 (76)
20 d2pc6a2 d.58.18.6 (A:1-77) Ace 83.8 1.3 9.7E-05 27.5 5.6 46 81-127 4-51 (77)
21 d2qmwa2 d.58.18.3 (A:185-264) 80.8 4.3 0.00032 24.8 9.0 57 86-147 9-66 (80)
22 d2hmfa3 d.58.18.10 (A:304-403) 59.0 18 0.0013 22.7 8.2 68 74-150 10-80 (100)
23 d2hmfa2 d.58.18.10 (A:404-470) 49.4 21 0.0015 20.7 5.6 50 91-148 15-64 (67)
24 d1j8ba_ d.222.1.1 (A:) Hypothe 47.3 15 0.0011 22.8 4.6 24 35-58 2-25 (92)
25 d1lrza1 a.2.7.4 (A:245-309) Me 39.5 12 0.00085 22.2 2.9 18 39-56 3-20 (65)
26 d2cdqa2 d.58.18.10 (A:329-419) 35.3 44 0.0032 20.3 9.9 36 77-113 11-49 (91)
27 d1gtda_ d.284.1.1 (A:) PurS su 27.9 22 0.0016 21.6 2.9 33 80-113 2-38 (82)
28 d1s5qb_ a.59.1.1 (B:) Sin3A {M 26.6 18 0.0013 22.2 2.3 17 33-49 9-25 (89)
29 d2f05a1 a.59.1.1 (A:1-85) Sin3 26.6 19 0.0014 21.9 2.3 16 34-49 7-22 (85)
30 d2j0wa2 d.58.18.10 (A:295-385) 26.5 18 0.0013 22.3 2.2 42 71-112 5-49 (91)
31 d1hroa_ a.3.1.1 (A:) Cytochrom 24.3 11 0.00077 23.9 0.8 36 10-45 65-105 (105)
32 d1ql3a_ a.3.1.1 (A:) Cytochrom 21.3 24 0.0018 21.9 2.1 35 11-45 60-99 (99)
33 d2clyb1 f.53.1.1 (B:4-123) ATP 21.1 37 0.0027 22.1 3.2 27 32-58 92-118 (120)
No 1
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=3.5e-15 Score=99.84 Aligned_cols=54 Identities=19% Similarity=0.362 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHHhHHHhhcCCC--CCCCcccchHHHHHHHHHHHHHHHHHHHHhhh
Q 031518 3 SREHKKAAALHEKLQLLRSITN--SHALSKTSIIVDASNYIEELKQKVERLNRDIE 56 (158)
Q Consensus 3 ~aER~RR~kln~~~~~LRslvP--~~K~DKaSil~dAI~YIk~Lq~~v~~Le~e~~ 56 (158)
.+||+||.+||+.|..|++++| ..|+||++||..||+||++|+.+++.|..+..
T Consensus 12 ~~Er~RR~~in~~~~~L~~llP~~~~k~~K~~iL~~a~~yI~~L~~~~~~L~~e~~ 67 (80)
T d1am9a_ 12 AIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENL 67 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999988 67999999999999999999999999988754
No 2
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.6e-15 Score=96.73 Aligned_cols=49 Identities=18% Similarity=0.347 Sum_probs=45.2
Q ss_pred HHHHHHhHHHhhcCCC--CCCCcccchHHHHHHHHHHHHHHHHHHHHhhhc
Q 031518 9 AAALHEKLQLLRSITN--SHALSKTSIIVDASNYIEELKQKVERLNRDIEN 57 (158)
Q Consensus 9 R~kln~~~~~LRslvP--~~K~DKaSil~dAI~YIk~Lq~~v~~Le~e~~~ 57 (158)
|.+||++|..||+++| .+|+|||+||.+||+||+.||.+++.|+++...
T Consensus 1 R~~in~~f~~L~~lvP~~~~K~~Ka~iL~~Ai~YI~~Lq~~~~~L~~e~~~ 51 (61)
T d1uklc_ 1 RSSINDKIIELKDLVMGTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQENMV 51 (61)
T ss_dssp CCCHHHHHHHHHHHHSCSSCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999988 469999999999999999999999999988654
No 3
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.8e-14 Score=96.82 Aligned_cols=54 Identities=22% Similarity=0.408 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHHhHHHhhcCCC---CCCCcccchHHHHHHHHHHHHHHHHHHHHhhh
Q 031518 3 SREHKKAAALHEKLQLLRSITN---SHALSKTSIIVDASNYIEELKQKVERLNRDIE 56 (158)
Q Consensus 3 ~aER~RR~kln~~~~~LRslvP---~~K~DKaSil~dAI~YIk~Lq~~v~~Le~e~~ 56 (158)
.+||+||.+||+.|..||+++| ..|++|++||..||+||+.|+.++..|..+.+
T Consensus 8 ~~Er~RR~~in~~f~~L~~llP~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~ 64 (83)
T d1nkpb_ 8 ALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDID 64 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSGGGTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999988 57899999999999999999999999987654
No 4
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.7e-14 Score=96.03 Aligned_cols=54 Identities=20% Similarity=0.278 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHhHHHhhcCCC----CCCCcccchHHHHHHHHHHHHHHHHHHHHhhh
Q 031518 3 SREHKKAAALHEKLQLLRSITN----SHALSKTSIIVDASNYIEELKQKVERLNRDIE 56 (158)
Q Consensus 3 ~aER~RR~kln~~~~~LRslvP----~~K~DKaSil~dAI~YIk~Lq~~v~~Le~e~~ 56 (158)
..||+||.+||+.|..||+++| ..|++|++||..||+||+.|+.+++.|..+.+
T Consensus 7 ~~Er~RR~~in~~f~~L~~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~ 64 (79)
T d1nlwa_ 7 EMEKNRRAHLRLSLEKLKGLVPLGPDSSRHTTLSLLTKAKLHIKKLEDSDRKAVHQID 64 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCSSSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999988 45899999999999999999999999987654
No 5
>d1a0aa_ a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.47 E-value=9.4e-15 Score=93.61 Aligned_cols=46 Identities=30% Similarity=0.330 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHhHHHhhcCCC--------CCCCcccchHHHHHHHHHHHHHHH
Q 031518 3 SREHKKAAALHEKLQLLRSITN--------SHALSKTSIIVDASNYIEELKQKV 48 (158)
Q Consensus 3 ~aER~RR~kln~~~~~LRslvP--------~~K~DKaSil~dAI~YIk~Lq~~v 48 (158)
.+||+||.+||+.|..||+++| ..|+||++||..||+||+.||+++
T Consensus 8 ~~Er~RR~~in~~~~~L~~llP~~~~~~~~~~k~sKa~iL~~Av~yI~~Lq~~v 61 (63)
T d1a0aa_ 8 HAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKATTVEAACRYIRHLQQNG 61 (63)
T ss_dssp GGTHHHHHHHHHHHHHHHHTSCHHHHTSSCCCCSCTTHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccccCCcccccHHHHHHHHHHHHHHHHHhh
Confidence 4799999999999999999988 368999999999999999999865
No 6
>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=1e-14 Score=94.85 Aligned_cols=47 Identities=28% Similarity=0.471 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHHhHHHhhcCCC---CCCCcccchHHHHHHHHHHHHHHHH
Q 031518 3 SREHKKAAALHEKLQLLRSITN---SHALSKTSIIVDASNYIEELKQKVE 49 (158)
Q Consensus 3 ~aER~RR~kln~~~~~LRslvP---~~K~DKaSil~dAI~YIk~Lq~~v~ 49 (158)
..||+||.+||+.|..||+++| ..|+||++||..||+||+.||+.++
T Consensus 18 ~~Er~Rr~~in~~~~~L~~llP~~~~~k~sK~~iL~~Ai~YI~~Lq~~l~ 67 (68)
T d1mdya_ 18 MRERRRLSKVNEAFETLKRSTSSNPNQRLPKVEILRNAIRYIEGLQALLR 67 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCSCTTSCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 4699999999999999999988 4688999999999999999998764
No 7
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=5.3e-14 Score=95.42 Aligned_cols=54 Identities=19% Similarity=0.277 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHhHHHhhcCCC----CCCCcccchHHHHHHHHHHHHHHHHHHHHhhh
Q 031518 3 SREHKKAAALHEKLQLLRSITN----SHALSKTSIIVDASNYIEELKQKVERLNRDIE 56 (158)
Q Consensus 3 ~aER~RR~kln~~~~~LRslvP----~~K~DKaSil~dAI~YIk~Lq~~v~~Le~e~~ 56 (158)
.+||+||.+||+.|..||+++| ..|++|++||..||+||+.|+++++.|..+.+
T Consensus 12 ~~Er~RR~~in~~f~~Lr~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~ 69 (88)
T d1nkpa_ 12 VLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEED 69 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999987 35799999999999999999999999987654
No 8
>d1an4a_ a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=2.4e-13 Score=87.42 Aligned_cols=45 Identities=31% Similarity=0.440 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHhHHHhhcCCC-C------CCCcccchHHHHHHHHHHHHHH
Q 031518 3 SREHKKAAALHEKLQLLRSITN-S------HALSKTSIIVDASNYIEELKQK 47 (158)
Q Consensus 3 ~aER~RR~kln~~~~~LRslvP-~------~K~DKaSil~dAI~YIk~Lq~~ 47 (158)
.+||+||.+||+.|..|++++| . .|++|++||..||+||+.||++
T Consensus 11 ~~Er~RR~~in~~f~~L~~lvP~~~~~~~~~k~sK~~iL~~av~yI~~Lq~~ 62 (65)
T d1an4a_ 11 EVERRRRDKINNWIVQLSKIIPDSSMESTKSGQSKGGILSKASDYIQELRQS 62 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCCCCCSSTTCCCTTTTTTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4799999999999999999998 3 3899999999999999999864
No 9
>d1zpva1 d.58.18.7 (A:1-83) UPF0237 protein SP0238 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=97.71 E-value=0.00042 Score=44.55 Aligned_cols=68 Identities=16% Similarity=0.212 Sum_probs=54.0
Q ss_pred EEEEEEecCCCCchHHHHHHHHhhCCCeEEEEEEEeeCCeEEEEEeeeecCCCCccCHHHHHHHHHHHHhhh
Q 031518 80 FMINVFSKKSCPGLLVSILETFEELALNVLEARVSCTDTFSLQAIGGENEEQGETIDAHVVKQALLQVIRNW 151 (158)
Q Consensus 80 ~~i~i~c~~~~~gll~~il~aLe~l~L~V~~a~is~~~~~~l~~~~v~~~~~~~~~~~~~l~~~l~~ai~~~ 151 (158)
+.|++.|+.+ ||++..|...|-+.|.++.+.+-...+++..-.+.+.. +...+.+.+..+|...-.+.
T Consensus 3 ~vitv~g~Dr-pGiVa~vt~~l~~~g~NI~d~~q~~~~~~f~~~~~v~~---~~~~~~~~l~~~l~~la~~l 70 (83)
T d1zpva1 3 AIITVVGKDK-SGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSS---DEKQDFTYLRNEFEAFGQTL 70 (83)
T ss_dssp EEEEEEESCC-TTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEE---SSCCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCC-CCHHHHHHHHHHHCCCeEEEEEeEEeCCEEEEEEEEEE---ecCCCHHHHHHHHHHHHHHc
Confidence 5789999999 99999999999999999999999888875433444544 23567888998887765543
No 10
>d1u8sa1 d.58.18.5 (A:2-87) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=97.26 E-value=0.0016 Score=42.16 Aligned_cols=67 Identities=10% Similarity=0.147 Sum_probs=53.0
Q ss_pred CeEEEEEEecCCCCchHHHHHHHHhhCCCeEEEEEEEeeCCeEEEEEeeeecCCCCccCHHHHHHHHHHHHh
Q 031518 78 KGFMINVFSKKSCPGLLVSILETFEELALNVLEARVSCTDTFSLQAIGGENEEQGETIDAHVVKQALLQVIR 149 (158)
Q Consensus 78 ~~~~i~i~c~~~~~gll~~il~aLe~l~L~V~~a~is~~~~~~l~~~~v~~~~~~~~~~~~~l~~~l~~ai~ 149 (158)
+.+.|.+.|+++ ||++.++...|-+.|.++.+++....+++..-.+.+... + -+.+.+...|.+.-.
T Consensus 4 ~~~vitv~G~Dr-pGiva~vt~~l~~~g~NI~d~~~~~~~~~~~~~~~v~~~--~--~~~~~l~~~L~~l~~ 70 (86)
T d1u8sa1 4 QHLVITAVGTDR-PGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS--P--SNITRVETTLPLLGQ 70 (86)
T ss_dssp EEEEEEEEEECC-TTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC--H--HHHHHHHHHHHHHHH
T ss_pred cEEEEEEEeCCC-ChHHHHHHHHHHHCCCeEEEeEeEEECCeeEEEEEEEcC--c--ccHHHHHHHHHHHHH
Confidence 358899999999 999999999999999999999999999876555555532 1 246677777665544
No 11
>d1u8sa2 d.58.18.5 (A:88-180) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=96.98 E-value=0.0071 Score=39.40 Aligned_cols=68 Identities=9% Similarity=0.101 Sum_probs=50.9
Q ss_pred EEEEEEecCCCCchHHHHHHHHhhCCCeEEEEEEEeeCC---------eEEEEEeeeecCCCCccCHHHHHHHHHHHHhh
Q 031518 80 FMINVFSKKSCPGLLVSILETFEELALNVLEARVSCTDT---------FSLQAIGGENEEQGETIDAHVVKQALLQVIRN 150 (158)
Q Consensus 80 ~~i~i~c~~~~~gll~~il~aLe~l~L~V~~a~is~~~~---------~~l~~~~v~~~~~~~~~~~~~l~~~l~~ai~~ 150 (158)
+.|.|.|+.+ ||++..|-..|-++|+++.+.+..+..+ |.++... .. +...+..++++.+......
T Consensus 7 v~v~v~g~Dr-pGIV~~it~~la~~~~nI~~l~t~~~~a~~~~~~~~~f~~~~~~-~~---p~~~~~~~l~~~l~~l~~~ 81 (93)
T d1u8sa2 7 VEVYVESDDK-LGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISA-RV---DSGCNLMQLQEEFDALCTA 81 (93)
T ss_dssp EEEEEEESCC-TTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEE-EE---CTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEEECCC-CCHHHHHHHHHHHcCCCchhhhcccccccCCcccCccEEEEEEE-Ec---CccccHHHHHHHHHHHHHH
Confidence 6788999999 9999999999999999999988766432 3333332 22 3457889999999776554
Q ss_pred hh
Q 031518 151 WS 152 (158)
Q Consensus 151 ~~ 152 (158)
.+
T Consensus 82 l~ 83 (93)
T d1u8sa2 82 LD 83 (93)
T ss_dssp HT
T ss_pred ce
Confidence 43
No 12
>d1y7pa2 d.58.18.12 (A:2-78) Hypothetical protein AF1403, N-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.52 E-value=0.0088 Score=37.84 Aligned_cols=35 Identities=14% Similarity=0.141 Sum_probs=28.1
Q ss_pred EEEEEecCCCCchHHHHHHHHhhCCCeEEEEEEEee
Q 031518 81 MINVFSKKSCPGLLVSILETFEELALNVLEARVSCT 116 (158)
Q Consensus 81 ~i~i~c~~~~~gll~~il~aLe~l~L~V~~a~is~~ 116 (158)
-|+|.|..+ ||+|.+|..++-+.+.++.+.+..+.
T Consensus 3 ~i~i~~~Dr-~GlL~di~~~ia~~~~NI~~i~~~~~ 37 (77)
T d1y7pa2 3 GLRIIAENK-IGVLRDLTTIIAEEGGNITFAQTFLI 37 (77)
T ss_dssp EEEEEEECC-TTHHHHHHHHCC----CEEEEEEEEC
T ss_pred eEEEEEecC-CChHHHHHHHHHHcCCCeEEEEeecc
Confidence 478999999 99999999999999999999997763
No 13
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=95.45 E-value=0.089 Score=32.43 Aligned_cols=44 Identities=11% Similarity=0.125 Sum_probs=38.5
Q ss_pred EEEEecCCCCchHHHHHHHHhhCCCeEEEEEEEeeCCeEEEEEee
Q 031518 82 INVFSKKSCPGLLVSILETFEELALNVLEARVSCTDTFSLQAIGG 126 (158)
Q Consensus 82 i~i~c~~~~~gll~~il~aLe~l~L~V~~a~is~~~~~~l~~~~v 126 (158)
|.|..+.+ ||.|.+++++|.+.|+++....+....++.+-.+.+
T Consensus 2 iaV~v~d~-pG~L~~v~~~L~~~~InI~~~y~~~~~~~~~~vl~v 45 (71)
T d2f06a1 2 VGISCPNV-PGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRP 45 (71)
T ss_dssp EEEEEESS-TTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEecCC-ccHHHHHHHHHHHCCCCEEEEEEEcCCCcEEEEEEE
Confidence 67888999 999999999999999999999988888877655555
No 14
>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=95.44 E-value=0.099 Score=32.30 Aligned_cols=45 Identities=13% Similarity=0.204 Sum_probs=38.7
Q ss_pred EEEEEecCCCCchHHHHHHHHhhCCCeEEEEEEEeeCCeEEEEEee
Q 031518 81 MINVFSKKSCPGLLVSILETFEELALNVLEARVSCTDTFSLQAIGG 126 (158)
Q Consensus 81 ~i~i~c~~~~~gll~~il~aLe~l~L~V~~a~is~~~~~~l~~~~v 126 (158)
.|.|..+.+ ||.|.++...|...|+++....++...++.+--+++
T Consensus 5 QisV~~eNk-pG~L~~v~~~~~~~~inI~sl~v~~t~~~~i~Riiv 49 (70)
T d2f06a2 5 QLSIFLENK-SGRLTEVTEVLAKENINLSALCIAENADFGILRGIV 49 (70)
T ss_dssp EEEEEECSS-SSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE
T ss_pred EEEEEEeCC-CcHHHHHHHHHHHCCCCEEEEEEeecCCCCEEEEEE
Confidence 478999999 999999999999999999999998888876544444
No 15
>d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]}
Probab=93.49 E-value=0.46 Score=29.68 Aligned_cols=47 Identities=17% Similarity=0.302 Sum_probs=37.0
Q ss_pred eEEEEEEecCCCCchHHHHHHHHhhCCCeEEEEEEEeeCCeEEEEEee
Q 031518 79 GFMINVFSKKSCPGLLVSILETFEELALNVLEARVSCTDTFSLQAIGG 126 (158)
Q Consensus 79 ~~~i~i~c~~~~~gll~~il~aLe~l~L~V~~a~is~~~~~~l~~~~v 126 (158)
+..+-+.-..+ ||.+.+|...|-+.|+++.+......++.-.-.+.+
T Consensus 11 ~~rl~i~~~d~-PGvla~I~~~l~~~~iNI~~~~~~~~~~~~~a~~~i 57 (84)
T d1sc6a3 11 GRRLMHIHENR-PGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 57 (84)
T ss_dssp SEEEEEEEESC-TTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred CeEEEEEeCCc-CCHHHHHHHHHHHcCCCHHHhccccCCCCcEEEEEE
Confidence 35666777889 999999999999999999998888777654333333
No 16
>d2fgca2 d.58.18.6 (A:27-104) Acetolactate synthase small subunit, IlvH {Thermotoga maritima [TaxId: 2336]}
Probab=90.54 E-value=0.54 Score=29.48 Aligned_cols=62 Identities=11% Similarity=0.254 Sum_probs=44.4
Q ss_pred EEEEEEecCCCCchHHHHHHHHhhCCCeEEEEEEEeeC--CeEEEEEeeeecCCCCccCHHHHHHHHHH
Q 031518 80 FMINVFSKKSCPGLLVSILETFEELALNVLEARVSCTD--TFSLQAIGGENEEQGETIDAHVVKQALLQ 146 (158)
Q Consensus 80 ~~i~i~c~~~~~gll~~il~aLe~l~L~V~~a~is~~~--~~~l~~~~v~~~~~~~~~~~~~l~~~l~~ 146 (158)
..|.+..+.+ ||+|.+|...|..-|+++.+-+++... |+.--++++.. ++ -..+.+...|.+
T Consensus 4 ~tisvlv~n~-pGvL~Ri~~lF~rRg~NI~SL~v~~te~~~iSR~tivv~g--~~--~~i~qi~kQl~K 67 (78)
T d2fgca2 4 HLVSMLVHNK-PGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKG--DD--KTIEQIEKQAYK 67 (78)
T ss_dssp EEEEEEEECC-TTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEE--CT--THHHHHHHHHTT
T ss_pred EEEEEEEeCC-CcHHHHHHHHHhhCCcceEEEEEeecCCCCeEEEEEEEEc--CH--HHHHHHHHHHhC
Confidence 5688899999 999999999999999999888887764 45555555543 22 234455444443
No 17
>d1ygya3 d.58.18.1 (A:452-529) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=88.45 E-value=1.7 Score=26.59 Aligned_cols=38 Identities=21% Similarity=0.274 Sum_probs=32.9
Q ss_pred CeEEEEEEecCCCCchHHHHHHHHhhCCCeEEEEEEEee
Q 031518 78 KGFMINVFSKKSCPGLLVSILETFEELALNVLEARVSCT 116 (158)
Q Consensus 78 ~~~~i~i~c~~~~~gll~~il~aLe~l~L~V~~a~is~~ 116 (158)
+|.++-+.-..+ ||.+.+|-..|-+.|+++....++..
T Consensus 2 eG~~L~i~~~D~-PGvi~~I~~~l~~~~iNI~~m~~~~~ 39 (78)
T d1ygya3 2 QGINLIIHYVDR-PGALGKIGTLLGTAGVNIQAAQLSED 39 (78)
T ss_dssp CSEEEEEEESCC-TTHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred CceEEEEEeCCc-CCHHHHHHHHHHhcCcChhhheeeec
Confidence 345666788899 99999999999999999999988765
No 18
>d1phza1 d.58.18.3 (A:19-115) Phenylalanine hydroxylase N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=86.87 E-value=1.1 Score=28.97 Aligned_cols=68 Identities=13% Similarity=0.068 Sum_probs=47.9
Q ss_pred EEEEEEecCCCCchHHHHHHHHhhCCCeEEEEEEEeeCC-eEEEEEeeeecCCCCccCHHHHHHHHHHHHhhhh
Q 031518 80 FMINVFSKKSCPGLLVSILETFEELALNVLEARVSCTDT-FSLQAIGGENEEQGETIDAHVVKQALLQVIRNWS 152 (158)
Q Consensus 80 ~~i~i~c~~~~~gll~~il~aLe~l~L~V~~a~is~~~~-~~l~~~~v~~~~~~~~~~~~~l~~~l~~ai~~~~ 152 (158)
.-|-+.++++ ||.|.++|..|...|+++.+-.+-+..+ ..-+.|.+..+ + . ..+.+..+|...-..|+
T Consensus 17 tSl~f~~~~~-pGaL~~vL~~f~~~~INLt~IeSRP~~~~~~~Y~F~id~e--g-~-~~~~i~~~l~~L~~~~~ 85 (97)
T d1phza1 17 ISLIFSLKEE-VGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLD--K-R-TKPVLGSIIKSLRNDIG 85 (97)
T ss_dssp EEEEEEEECC-TTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBC--G-G-GHHHHHHHHHHHHHTTC
T ss_pred EEEEEEeCCC-CCHHHHHHHHHHHCCCCEEEEEeeccCCCCceEEEEEEcc--c-C-ChHHHHHHHHHHHHhhC
Confidence 6666778899 9999999999999999998888877654 33455666653 2 2 23557766655444444
No 19
>d2f1fa1 d.58.18.6 (A:2-77) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=86.69 E-value=0.85 Score=28.36 Aligned_cols=45 Identities=24% Similarity=0.363 Sum_probs=34.3
Q ss_pred EEEEEecCCCCchHHHHHHHHhhCCCeEEEEEEEeeC--CeEEEEEee
Q 031518 81 MINVFSKKSCPGLLVSILETFEELALNVLEARVSCTD--TFSLQAIGG 126 (158)
Q Consensus 81 ~i~i~c~~~~~gll~~il~aLe~l~L~V~~a~is~~~--~~~l~~~~v 126 (158)
.|.+.-+.+ ||+|.+|...|..-|+++-+-+++... ++.--++++
T Consensus 3 tlsv~v~N~-~GVL~RisglF~rRg~NI~Sl~v~~te~~~iSR~tivv 49 (76)
T d2f1fa1 3 ILSVLLENE-SGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQT 49 (76)
T ss_dssp EEEEEEECC-TTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEE
T ss_pred EEEEEEECC-CcHHHHHHHHHHhcCcceEEEEEcccCCCCeeEEEEEE
Confidence 467788899 999999999999988887777776554 455444544
No 20
>d2pc6a2 d.58.18.6 (A:1-77) Acetolactate synthase small subunit, IlvH {Nitrosomonas europaea [TaxId: 915]}
Probab=83.79 E-value=1.3 Score=27.46 Aligned_cols=46 Identities=20% Similarity=0.257 Sum_probs=36.0
Q ss_pred EEEEEecCCCCchHHHHHHHHhhCCCeEEEEEEEee--CCeEEEEEeee
Q 031518 81 MINVFSKKSCPGLLVSILETFEELALNVLEARVSCT--DTFSLQAIGGE 127 (158)
Q Consensus 81 ~i~i~c~~~~~gll~~il~aLe~l~L~V~~a~is~~--~~~~l~~~~v~ 127 (158)
.|.+..+.+ ||+|.+|...|..-|+++.+-+++.. +|..--++++.
T Consensus 4 tisv~veN~-pGvL~Ris~lF~rRg~NI~Sltv~~te~~~iSRmtivv~ 51 (77)
T d2pc6a2 4 IISLLMENE-AGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTN 51 (77)
T ss_dssp EEEEEEECS-TTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEE
T ss_pred EEEEEEECC-ccHHHHHHHHHhccCcceEEEEEeccCCCCeEEEEEEEE
Confidence 577888999 99999999999888877777777655 45665666664
No 21
>d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=80.78 E-value=4.3 Score=24.81 Aligned_cols=57 Identities=21% Similarity=0.275 Sum_probs=40.7
Q ss_pred ecCCCCchHHHHHHHHhhCCCeEEEEEEEeeCCe-EEEEEeeeecCCCCccCHHHHHHHHHHH
Q 031518 86 SKKSCPGLLVSILETFEELALNVLEARVSCTDTF-SLQAIGGENEEQGETIDAHVVKQALLQV 147 (158)
Q Consensus 86 c~~~~~gll~~il~aLe~l~L~V~~a~is~~~~~-~l~~~~v~~~~~~~~~~~~~l~~~l~~a 147 (158)
-..+ ||.|.+++..+...|++..+-.+-+..+. .-+.|.++.+ + ..+. .++.+|...
T Consensus 9 ~~d~-pGaL~~vL~~F~~~~INLt~IeSRP~~~~~~~Y~F~id~~--g-~~~~-~~~~~l~~L 66 (80)
T d2qmwa2 9 MHDK-PGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQAD--S-AITT-DIKKVIAIL 66 (80)
T ss_dssp SSCC-TTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEES--C-CSCH-HHHHHHHHH
T ss_pred CCCC-CCHHHHHHHHHHHCCCCEEEEEeeecCCCCceEEEEEEEe--c-CCcH-HHHHHHHHH
Confidence 3466 99999999999999999999999888663 3455666663 2 2343 465555443
No 22
>d2hmfa3 d.58.18.10 (A:304-403) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=58.95 E-value=18 Score=22.66 Aligned_cols=68 Identities=18% Similarity=0.234 Sum_probs=44.2
Q ss_pred EEECCeEEEEEEec---CCCCchHHHHHHHHhhCCCeEEEEEEEeeCCeEEEEEeeeecCCCCccCHHHHHHHHHHHHhh
Q 031518 74 KTLEKGFMINVFSK---KSCPGLLVSILETFEELALNVLEARVSCTDTFSLQAIGGENEEQGETIDAHVVKQALLQVIRN 150 (158)
Q Consensus 74 ~~~~~~~~i~i~c~---~~~~gll~~il~aLe~l~L~V~~a~is~~~~~~l~~~~v~~~~~~~~~~~~~l~~~l~~ai~~ 150 (158)
....+-.+|.+... .. ||.+.+++.+|.+.|++|.-..-++.. .. -+|.+.. -+.+...++|++++..
T Consensus 10 ~~~~nva~IsivG~~m~~~-~Gi~arif~~La~~~InV~mIsQ~~Se-~~-Isf~V~~------~d~~~a~~~L~~~f~~ 80 (100)
T d2hmfa3 10 STIKNVALINIFGAGMVGV-SGTAARIFKALGEEEVNVILISQGSSE-TN-ISLVVSE------EDVDKALKALKREFGD 80 (100)
T ss_dssp EEEEEEEEEEEEECSSSCH-HHHHHHHHHHHHHTTCCEEEEEECCTT-CC-EEEEECS------TTHHHHHHHHHHHHCC
T ss_pred EecCCEEEEEEECCCCCCC-cchHHHHHHHHHHcCCCHHHeeccCCc-ce-EEEEEeH------HHHHHHHHHHHHHHHh
Confidence 33444588888764 44 899999999999999888765433322 11 2344432 2556777778877643
No 23
>d2hmfa2 d.58.18.10 (A:404-470) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=49.38 E-value=21 Score=20.65 Aligned_cols=50 Identities=12% Similarity=0.092 Sum_probs=30.8
Q ss_pred CchHHHHHHHHhhCCCeEEEEEEEeeCCeEEEEEeeeecCCCCccCHHHHHHHHHHHH
Q 031518 91 PGLLVSILETFEELALNVLEARVSCTDTFSLQAIGGENEEQGETIDAHVVKQALLQVI 148 (158)
Q Consensus 91 ~gll~~il~aLe~l~L~V~~a~is~~~~~~l~~~~v~~~~~~~~~~~~~l~~~l~~ai 148 (158)
||+..+++.+|.+.|++|.-.+-++.. .. -.+.+.. -+.+.-.++|++++
T Consensus 15 ~gi~arif~~L~~~~InV~mIsq~~Se-~~-Is~~V~~------~d~~~Av~~Lh~~F 64 (67)
T d2hmfa2 15 KGIAGKIFTAVSESGANIKMIAQGSSE-VN-ISFVIDE------KDLLNCVRKLHEKF 64 (67)
T ss_dssp TTHHHHHHHHHHHTTCCCCEEEESSCS-SE-EEEEEEG------GGHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHcCCChHHeeecCcc-ce-EEEEEeH------HHHHHHHHHHHHHH
Confidence 999999999999999888754433332 11 2233432 23455555565553
No 24
>d1j8ba_ d.222.1.1 (A:) Hypothetical protein HI0442 {Haemophilus influenzae [TaxId: 727]}
Probab=47.27 E-value=15 Score=22.76 Aligned_cols=24 Identities=8% Similarity=0.252 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcC
Q 031518 35 VDASNYIEELKQKVERLNRDIENG 58 (158)
Q Consensus 35 ~dAI~YIk~Lq~~v~~Le~e~~~~ 58 (158)
++-.+-.+++|+++++++.+++..
T Consensus 2 ~~mmkqaq~mq~~m~~~q~eL~~~ 25 (92)
T d1j8ba_ 2 GGLMKQAQQMQEKMQKMQEEIAQL 25 (92)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCe
Confidence 345567788999999999988754
No 25
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=39.47 E-value=12 Score=22.15 Aligned_cols=18 Identities=39% Similarity=0.785 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 031518 39 NYIEELKQKVERLNRDIE 56 (158)
Q Consensus 39 ~YIk~Lq~~v~~Le~e~~ 56 (158)
+||.+|+.+...|+.++.
T Consensus 3 eYl~~L~~~~~~L~~~i~ 20 (65)
T d1lrza1 3 EYIKELNEERDILNKDLN 20 (65)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 699999999999988754
No 26
>d2cdqa2 d.58.18.10 (A:329-419) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=35.33 E-value=44 Score=20.31 Aligned_cols=36 Identities=25% Similarity=0.393 Sum_probs=29.7
Q ss_pred CCeEEEEEEec---CCCCchHHHHHHHHhhCCCeEEEEEE
Q 031518 77 EKGFMINVFSK---KSCPGLLVSILETFEELALNVLEARV 113 (158)
Q Consensus 77 ~~~~~i~i~c~---~~~~gll~~il~aLe~l~L~V~~a~i 113 (158)
.+-.+|+|... .. ||.+.+++.+|.+.|++|.-.+.
T Consensus 11 ~~ia~i~v~g~~m~~~-~G~~a~if~~La~~~Inv~~Is~ 49 (91)
T d2cdqa2 11 RNVTMLDIASTRMLGQ-VGFLAKVFSIFEELGISVDVVAT 49 (91)
T ss_dssp EEEEEEEEECGGGTTC-TTHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEEEEeCCCCCC-ccHHHHHHHHHHHcCCcEEEEEe
Confidence 34488888765 56 99999999999999999987653
No 27
>d1gtda_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=27.90 E-value=22 Score=21.63 Aligned_cols=33 Identities=24% Similarity=0.397 Sum_probs=23.8
Q ss_pred EEEEEEecCCCCchH----HHHHHHHhhCCCeEEEEEE
Q 031518 80 FMINVFSKKSCPGLL----VSILETFEELALNVLEARV 113 (158)
Q Consensus 80 ~~i~i~c~~~~~gll----~~il~aLe~l~L~V~~a~i 113 (158)
|.++|.-..+ ||++ ..|..+|.+||+++-++++
T Consensus 2 f~v~V~V~lK-~gVlDPqG~ai~~aL~~lG~~v~~Vr~ 38 (82)
T d1gtda_ 2 FMVEVRIRLK-KGMLNPEAATIERALALLGYEVEDTDT 38 (82)
T ss_dssp EEEEEEEEEC-TTSCCHHHHHHHHHHHHHTCCCEEEEE
T ss_pred eEEEEEEEEC-CCCcCcHHHHHHHHHHHcCCCcceEEE
Confidence 4566666666 6644 5789999999998766655
No 28
>d1s5qb_ a.59.1.1 (B:) Sin3A {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.61 E-value=18 Score=22.19 Aligned_cols=17 Identities=24% Similarity=0.493 Sum_probs=14.6
Q ss_pred hHHHHHHHHHHHHHHHH
Q 031518 33 IIVDASNYIEELKQKVE 49 (158)
Q Consensus 33 il~dAI~YIk~Lq~~v~ 49 (158)
=+.+|+.|++.++.+.+
T Consensus 9 ~~~~A~~yl~kVK~~f~ 25 (89)
T d1s5qb_ 9 EFNHAINYVNKIKNRFQ 25 (89)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHc
Confidence 37899999999999874
No 29
>d2f05a1 a.59.1.1 (A:1-85) Sin3B {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.56 E-value=19 Score=21.90 Aligned_cols=16 Identities=19% Similarity=0.449 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHH
Q 031518 34 IVDASNYIEELKQKVE 49 (158)
Q Consensus 34 l~dAI~YIk~Lq~~v~ 49 (158)
+.||++|++.++.+.+
T Consensus 7 ~~dA~~yl~kVK~rf~ 22 (85)
T d2f05a1 7 FNNAISYVNKIKTRFL 22 (85)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 5799999999998864
No 30
>d2j0wa2 d.58.18.10 (A:295-385) Aspartokinase {Escherichia coli [TaxId: 562]}
Probab=26.47 E-value=18 Score=22.26 Aligned_cols=42 Identities=12% Similarity=0.199 Sum_probs=29.8
Q ss_pred EEEEEECCe-EEEEEEecCCC--CchHHHHHHHHhhCCCeEEEEE
Q 031518 71 VTVKTLEKG-FMINVFSKKSC--PGLLVSILETFEELALNVLEAR 112 (158)
Q Consensus 71 V~V~~~~~~-~~i~i~c~~~~--~gll~~il~aLe~l~L~V~~a~ 112 (158)
|+--...++ .+|.+....-. ||.+.+|+.+|.+.|++|.-..
T Consensus 5 vk~I~~~~~~~~i~v~g~~m~~~~G~~~~if~~L~~~~Inv~mis 49 (91)
T d2j0wa2 5 FRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLIT 49 (91)
T ss_dssp EEEEEEEEEEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEE
T ss_pred ceEEEEeCCEEEEEEEeCCCCCCcCHHHHHHHHHHHcCCcEEEEE
Confidence 443333334 77888654442 7999999999999998887664
No 31
>d1hroa_ a.3.1.1 (A:) Cytochrome c2 {Rhodopila globiformis [TaxId: 1071]}
Probab=24.31 E-value=11 Score=23.91 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=22.2
Q ss_pred HHHHHhHHHhhcCCCCCCCc-----ccchHHHHHHHHHHHH
Q 031518 10 AALHEKLQLLRSITNSHALS-----KTSIIVDASNYIEELK 45 (158)
Q Consensus 10 ~kln~~~~~LRslvP~~K~D-----KaSil~dAI~YIk~Lq 45 (158)
+.|.+-+..=+.++|-++|- +..-+.|-|.|++.||
T Consensus 65 ~~L~~~l~~P~~~~pgt~M~~~gl~~~~~~~dliaYL~sLK 105 (105)
T d1hroa_ 65 DVLFKYIEHPQKIVPGTKMGYPGQPDPQKRADIIAYLETLK 105 (105)
T ss_dssp HHHHHHHHCHHHHSTTCCCCCCCCCCHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHCccccCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 34554444445666756663 3445788999998774
No 32
>d1ql3a_ a.3.1.1 (A:) Cytochrome c552 {Paracoccus denitrificans [TaxId: 266]}
Probab=21.28 E-value=24 Score=21.87 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=21.5
Q ss_pred HHHHhHHHhhcCCCCCCCc-----ccchHHHHHHHHHHHH
Q 031518 11 ALHEKLQLLRSITNSHALS-----KTSIIVDASNYIEELK 45 (158)
Q Consensus 11 kln~~~~~LRslvP~~K~D-----KaSil~dAI~YIk~Lq 45 (158)
.|.+-+..=.+++|-++|- +..-+.|-|.|++.+|
T Consensus 60 ~L~~~l~~P~~~~pgt~M~~~gl~~~~d~~dliaYLks~~ 99 (99)
T d1ql3a_ 60 ALQEFLTNPKAVVKGTKMAFAGLPKIEDRANLIAYLEGQQ 99 (99)
T ss_dssp HHHHHHHCHHHHSTTCSCCCCCCCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHhChHhhCCCCCCCCCCCCCHHHHHHHHHHHhhcC
Confidence 3444444455667755553 3344788899998764
No 33
>d2clyb1 f.53.1.1 (B:4-123) ATP synthase subunit d, mitochondrial {Cow (Bos taurus) [TaxId: 9913]}
Probab=21.12 E-value=37 Score=22.07 Aligned_cols=27 Identities=7% Similarity=0.363 Sum_probs=22.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhhcC
Q 031518 32 SIIVDASNYIEELKQKVERLNRDIENG 58 (158)
Q Consensus 32 Sil~dAI~YIk~Lq~~v~~Le~e~~~~ 58 (158)
-.+.++-.|+++-+.++++|+.+++..
T Consensus 92 e~~~~~~~~~~~s~~rI~~lekeLe~i 118 (120)
T d2clyb1 92 EDVKSCAEFLTQSKTRIQEYEKELEKM 118 (120)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 347788999999999999999988754
Done!