Query 031524
Match_columns 158
No_of_seqs 144 out of 1383
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 15:20:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031524.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031524hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0412 Dienelactone hydrolase 99.8 5.5E-20 1.2E-24 146.3 11.8 113 44-158 2-126 (236)
2 PF01738 DLH: Dienelactone hyd 99.7 3.2E-18 7E-23 133.0 7.7 101 56-158 1-112 (218)
3 KOG3043 Predicted hydrolase re 99.7 3.1E-16 6.7E-21 122.8 10.8 103 54-158 26-134 (242)
4 PRK13604 luxD acyl transferase 99.6 1E-15 2.2E-20 125.8 10.8 102 48-158 13-122 (307)
5 TIGR03101 hydr2_PEP hydrolase, 99.6 2.9E-15 6.4E-20 121.1 9.8 104 46-158 2-113 (266)
6 TIGR03100 hydr1_PEP hydrolase, 99.5 1.8E-13 4E-18 110.3 11.6 103 45-158 3-114 (274)
7 PRK05077 frsA fermentation/res 99.5 6E-14 1.3E-18 119.7 9.2 107 40-158 164-279 (414)
8 PHA02857 monoglyceride lipase; 99.5 2.4E-13 5.1E-18 108.2 10.7 103 48-158 5-111 (276)
9 COG1647 Esterase/lipase [Gener 99.5 1.7E-13 3.7E-18 107.4 9.3 84 66-158 15-99 (243)
10 PLN02298 hydrolase, alpha/beta 99.5 2.8E-13 6.1E-18 111.0 11.1 106 45-158 33-148 (330)
11 PLN02385 hydrolase; alpha/beta 99.5 6.9E-13 1.5E-17 109.9 12.5 103 48-158 66-176 (349)
12 PRK10566 esterase; Provisional 99.4 3.5E-13 7.7E-18 105.7 8.5 90 65-158 26-121 (249)
13 PRK10749 lysophospholipase L2; 99.4 6.3E-13 1.4E-17 109.6 9.5 112 44-158 30-145 (330)
14 PLN02652 hydrolase; alpha/beta 99.4 1.4E-12 3E-17 110.8 11.1 106 45-158 111-222 (395)
15 PRK00870 haloalkane dehalogena 99.4 5.2E-12 1.1E-16 102.2 10.7 104 45-158 22-129 (302)
16 PRK10985 putative hydrolase; P 99.4 5.8E-12 1.3E-16 103.7 10.2 102 47-157 34-144 (324)
17 PLN02511 hydrolase 99.3 1.1E-11 2.5E-16 104.7 12.1 106 44-158 71-187 (388)
18 COG1506 DAP2 Dipeptidyl aminop 99.3 8.9E-12 1.9E-16 111.2 9.3 114 38-158 359-487 (620)
19 TIGR03611 RutD pyrimidine util 99.3 1.2E-11 2.6E-16 95.2 8.5 82 65-158 12-94 (257)
20 TIGR02240 PHA_depoly_arom poly 99.3 2.8E-11 6.1E-16 96.6 10.3 97 49-158 7-105 (276)
21 KOG2564 Predicted acetyltransf 99.3 7.4E-11 1.6E-15 95.6 12.6 112 40-158 46-160 (343)
22 PLN02824 hydrolase, alpha/beta 99.3 2.2E-11 4.7E-16 98.0 9.4 88 65-158 28-116 (294)
23 TIGR03056 bchO_mg_che_rel puta 99.3 2.8E-11 6E-16 95.1 9.7 92 55-158 17-109 (278)
24 PF12715 Abhydrolase_7: Abhydr 99.3 5.6E-12 1.2E-16 105.9 5.8 120 36-157 80-239 (390)
25 PLN02872 triacylglycerol lipas 99.3 1.2E-11 2.7E-16 105.1 7.9 119 35-157 35-173 (395)
26 TIGR00976 /NonD putative hydro 99.3 1.3E-11 2.7E-16 108.6 7.8 98 50-157 2-110 (550)
27 PRK05855 short chain dehydroge 99.3 3.7E-11 8.1E-16 104.3 10.2 102 46-157 5-107 (582)
28 TIGR03343 biphenyl_bphD 2-hydr 99.2 7.9E-11 1.7E-15 93.4 11.1 104 44-158 7-115 (282)
29 PLN02211 methyl indole-3-aceta 99.2 2.2E-11 4.7E-16 98.2 8.0 85 63-157 14-100 (273)
30 PLN02965 Probable pheophorbida 99.2 1.8E-11 4E-16 96.8 7.5 81 68-158 5-86 (255)
31 PRK10673 acyl-CoA esterase; Pr 99.2 2.1E-11 4.6E-16 95.2 7.5 81 64-158 14-95 (255)
32 TIGR02427 protocat_pcaD 3-oxoa 99.2 4.9E-11 1.1E-15 90.8 9.1 81 65-158 12-93 (251)
33 TIGR01607 PST-A Plasmodium sub 99.2 3.1E-11 6.8E-16 100.0 8.6 102 51-158 4-156 (332)
34 KOG4391 Predicted alpha/beta h 99.2 1.1E-10 2.4E-15 91.9 11.0 121 25-158 36-163 (300)
35 PRK03592 haloalkane dehalogena 99.2 8.9E-11 1.9E-15 94.5 10.9 81 65-158 26-107 (295)
36 PLN00021 chlorophyllase 99.2 4.5E-11 9.7E-16 98.8 9.4 89 54-158 37-140 (313)
37 COG2267 PldB Lysophospholipase 99.2 7.2E-11 1.6E-15 96.9 9.6 103 48-158 13-121 (298)
38 COG0429 Predicted hydrolase of 99.2 8.6E-11 1.9E-15 97.0 9.9 100 48-156 53-160 (345)
39 PLN02679 hydrolase, alpha/beta 99.2 1.4E-10 3.1E-15 96.8 11.3 80 66-157 88-168 (360)
40 PRK10162 acetyl esterase; Prov 99.2 7.2E-11 1.6E-15 97.3 9.2 100 44-158 57-168 (318)
41 KOG1455 Lysophospholipase [Lip 99.2 2.4E-10 5.2E-15 93.3 11.7 106 45-158 28-143 (313)
42 PF12697 Abhydrolase_6: Alpha/ 99.2 2.1E-11 4.5E-16 91.2 4.9 79 69-158 1-80 (228)
43 TIGR03695 menH_SHCHC 2-succiny 99.2 8.6E-11 1.9E-15 89.0 7.2 81 67-158 2-84 (251)
44 TIGR01250 pro_imino_pep_2 prol 99.2 1.8E-10 3.9E-15 89.7 8.7 85 65-158 24-110 (288)
45 PRK14875 acetoin dehydrogenase 99.1 2.6E-10 5.6E-15 94.0 9.9 96 50-158 115-211 (371)
46 PRK10115 protease 2; Provision 99.1 4E-10 8.7E-15 101.7 9.4 113 41-158 413-538 (686)
47 COG2945 Predicted hydrolase of 99.1 1.9E-10 4.2E-15 88.6 5.8 104 44-158 4-117 (210)
48 PRK03204 haloalkane dehalogena 99.1 1.8E-09 3.8E-14 87.3 11.4 98 47-158 17-115 (286)
49 PLN02578 hydrolase 99.1 8.1E-10 1.8E-14 92.0 9.5 82 64-158 84-166 (354)
50 PF12695 Abhydrolase_5: Alpha/ 99.1 3.6E-10 7.8E-15 81.0 6.3 71 68-157 1-74 (145)
51 PRK11126 2-succinyl-6-hydroxy- 99.1 6E-10 1.3E-14 86.5 7.6 78 66-158 2-80 (242)
52 PRK06489 hypothetical protein; 99.0 4.3E-10 9.3E-15 93.7 6.6 90 66-158 69-168 (360)
53 TIGR01840 esterase_phb esteras 99.0 3.7E-10 8.1E-15 87.5 5.8 88 65-158 12-109 (212)
54 TIGR01738 bioH putative pimelo 99.0 4.4E-10 9.6E-15 85.4 5.8 75 66-158 4-79 (245)
55 PF06500 DUF1100: Alpha/beta h 99.0 2.7E-10 5.8E-15 96.9 4.9 107 40-158 161-275 (411)
56 PLN02894 hydrolase, alpha/beta 99.0 1.5E-09 3.3E-14 92.2 9.5 85 65-158 104-190 (402)
57 TIGR01249 pro_imino_pep_1 prol 99.0 1.9E-09 4.2E-14 87.7 9.0 100 48-158 8-109 (306)
58 PF05448 AXE1: Acetyl xylan es 99.0 4.6E-10 1E-14 93.1 5.3 115 41-158 53-189 (320)
59 PLN03087 BODYGUARD 1 domain co 99.0 3.2E-09 6.9E-14 92.4 10.2 99 51-158 183-288 (481)
60 PRK10349 carboxylesterase BioH 99.0 1.9E-09 4.2E-14 84.8 7.8 74 67-158 14-88 (256)
61 KOG1838 Alpha/beta hydrolase [ 99.0 5.4E-09 1.2E-13 88.7 10.8 84 65-157 124-211 (409)
62 KOG4178 Soluble epoxide hydrol 99.0 5E-09 1.1E-13 86.4 9.9 87 62-158 40-127 (322)
63 COG3458 Acetyl esterase (deace 99.0 9.5E-10 2.1E-14 88.8 5.3 115 41-158 53-190 (321)
64 PLN03084 alpha/beta hydrolase 98.9 6E-09 1.3E-13 88.3 9.8 86 64-158 125-211 (383)
65 TIGR03502 lipase_Pla1_cef extr 98.9 1.6E-09 3.6E-14 98.6 6.7 90 66-157 449-568 (792)
66 cd00707 Pancreat_lipase_like P 98.9 3.9E-09 8.5E-14 85.6 8.0 87 65-158 35-126 (275)
67 PF07224 Chlorophyllase: Chlor 98.9 7.9E-09 1.7E-13 83.3 9.4 106 38-158 10-134 (307)
68 TIGR01836 PHA_synth_III_C poly 98.9 5.2E-09 1.1E-13 86.9 8.0 81 66-158 62-150 (350)
69 PF12146 Hydrolase_4: Putative 98.9 1.5E-08 3.2E-13 67.7 7.5 73 55-135 3-78 (79)
70 PF12740 Chlorophyllase2: Chlo 98.8 2.3E-08 5E-13 80.6 8.8 79 64-158 15-105 (259)
71 KOG1552 Predicted alpha/beta h 98.8 7.2E-08 1.6E-12 77.3 10.9 101 45-156 36-142 (258)
72 PRK07581 hypothetical protein; 98.8 9E-09 1.9E-13 84.7 5.7 92 65-158 40-138 (339)
73 TIGR02821 fghA_ester_D S-formy 98.8 7E-08 1.5E-12 77.8 10.4 63 41-104 10-81 (275)
74 COG4757 Predicted alpha/beta h 98.8 2.6E-08 5.7E-13 79.0 7.4 105 47-157 8-118 (281)
75 PRK08775 homoserine O-acetyltr 98.8 2.4E-08 5.2E-13 82.6 7.6 77 68-158 59-152 (343)
76 PF02129 Peptidase_S15: X-Pro 98.8 1.8E-08 4E-13 81.0 6.6 94 54-157 3-114 (272)
77 TIGR01838 PHA_synth_I poly(R)- 98.7 6.2E-08 1.3E-12 85.3 10.0 91 55-157 173-275 (532)
78 COG0657 Aes Esterase/lipase [L 98.7 7.5E-08 1.6E-12 78.6 9.0 89 55-158 63-166 (312)
79 PF00326 Peptidase_S9: Prolyl 98.7 2E-08 4.3E-13 77.4 5.3 69 84-158 5-78 (213)
80 TIGR01392 homoserO_Ac_trn homo 98.7 5.3E-08 1.2E-12 80.8 7.6 89 65-158 30-141 (351)
81 PLN02980 2-oxoglutarate decarb 98.7 1E-07 2.2E-12 93.3 10.3 87 66-158 1371-1459(1655)
82 PF07859 Abhydrolase_3: alpha/ 98.7 1.9E-08 4E-13 77.1 4.0 75 69-158 1-85 (211)
83 PRK11071 esterase YqiA; Provis 98.7 4.7E-08 1E-12 75.1 6.1 72 67-158 2-75 (190)
84 PLN02442 S-formylglutathione h 98.7 2.3E-07 5.1E-12 75.3 10.3 113 44-158 18-157 (283)
85 KOG4667 Predicted esterase [Li 98.7 1.2E-07 2.6E-12 74.7 8.0 105 44-157 10-118 (269)
86 KOG4409 Predicted hydrolase/ac 98.6 1.2E-07 2.5E-12 79.1 8.0 128 21-158 42-174 (365)
87 TIGR03230 lipo_lipase lipoprot 98.6 1.1E-07 2.5E-12 81.9 8.2 87 65-158 40-133 (442)
88 KOG2281 Dipeptidyl aminopeptid 98.6 1.7E-07 3.6E-12 83.3 8.6 108 45-158 614-741 (867)
89 PRK11460 putative hydrolase; P 98.6 6.7E-08 1.4E-12 76.3 5.7 90 65-158 15-117 (232)
90 COG4188 Predicted dienelactone 98.6 1.9E-07 4.1E-12 78.3 7.5 111 44-157 38-172 (365)
91 KOG2382 Predicted alpha/beta h 98.5 2.4E-07 5.1E-12 76.5 7.0 83 64-155 50-134 (315)
92 PF02273 Acyl_transf_2: Acyl t 98.5 5.7E-07 1.2E-11 72.1 8.4 101 49-158 7-115 (294)
93 PF03403 PAF-AH_p_II: Platelet 98.5 1.4E-07 3E-12 80.0 5.1 42 64-107 98-139 (379)
94 PRK00175 metX homoserine O-ace 98.5 3.9E-07 8.5E-12 76.7 7.6 88 66-158 48-161 (379)
95 PF01674 Lipase_2: Lipase (cla 98.4 1.9E-07 4.1E-12 73.8 4.0 83 67-158 2-89 (219)
96 PF05677 DUF818: Chlamydia CHL 98.4 1.8E-06 3.9E-11 72.0 9.9 107 40-157 108-228 (365)
97 KOG1454 Predicted hydrolase/ac 98.4 1.1E-06 2.4E-11 73.1 8.4 84 65-158 57-142 (326)
98 PF07819 PGAP1: PGAP1-like pro 98.4 1.3E-06 2.8E-11 69.1 7.9 84 66-158 4-99 (225)
99 TIGR01839 PHA_synth_II poly(R) 98.4 1.6E-06 3.4E-11 76.6 9.1 91 55-158 200-302 (560)
100 PRK07868 acyl-CoA synthetase; 98.4 1.6E-06 3.5E-11 81.3 9.0 84 66-158 67-155 (994)
101 PF00151 Lipase: Lipase; Inte 98.3 6E-07 1.3E-11 74.9 4.5 87 65-158 70-164 (331)
102 COG3509 LpqC Poly(3-hydroxybut 98.3 1.1E-06 2.5E-11 71.8 5.8 112 43-158 34-158 (312)
103 PF06057 VirJ: Bacterial virul 98.3 5.3E-06 1.1E-10 64.1 8.7 77 68-157 4-81 (192)
104 PF06342 DUF1057: Alpha/beta h 98.2 1.8E-05 3.8E-10 64.7 10.7 81 66-156 35-116 (297)
105 KOG1515 Arylacetamide deacetyl 98.2 1.3E-05 2.9E-10 67.0 9.4 92 53-158 71-180 (336)
106 COG2936 Predicted acyl esteras 98.2 4.4E-06 9.6E-11 73.7 6.4 105 42-156 17-136 (563)
107 PF00975 Thioesterase: Thioest 98.1 5.1E-06 1.1E-10 64.2 5.7 80 67-158 1-80 (229)
108 KOG2100 Dipeptidyl aminopeptid 98.1 1.3E-05 2.7E-10 73.6 8.5 111 43-158 497-622 (755)
109 PF10503 Esterase_phd: Esteras 98.1 9.1E-06 2E-10 64.3 6.5 89 65-158 15-111 (220)
110 KOG2237 Predicted serine prote 98.1 1.5E-05 3.2E-10 71.0 7.8 116 40-158 437-563 (712)
111 cd00312 Esterase_lipase Estera 98.0 2.8E-05 6E-10 67.3 9.2 94 55-158 80-190 (493)
112 KOG2624 Triglyceride lipase-ch 98.0 1.8E-05 4E-10 67.6 7.3 120 35-157 39-174 (403)
113 COG0596 MhpC Predicted hydrola 97.9 4.5E-05 9.8E-10 56.8 7.3 79 66-157 21-101 (282)
114 KOG3847 Phospholipase A2 (plat 97.9 9.2E-06 2E-10 67.2 3.6 39 65-105 117-155 (399)
115 PF00561 Abhydrolase_1: alpha/ 97.9 9.6E-06 2.1E-10 61.4 3.3 57 96-158 1-58 (230)
116 PF05990 DUF900: Alpha/beta hy 97.8 9.8E-05 2.1E-09 58.7 8.2 86 65-157 17-106 (233)
117 PF09752 DUF2048: Uncharacteri 97.8 8.9E-05 1.9E-09 62.1 7.1 92 65-158 91-189 (348)
118 PF05057 DUF676: Putative seri 97.7 4.6E-05 1E-09 59.7 4.7 25 66-90 4-28 (217)
119 PRK05371 x-prolyl-dipeptidyl a 97.7 5.7E-05 1.2E-09 69.4 5.7 64 84-157 270-351 (767)
120 COG2272 PnbA Carboxylesterase 97.7 0.0001 2.3E-09 64.0 6.1 97 55-157 81-193 (491)
121 PF10230 DUF2305: Uncharacteri 97.7 0.00012 2.5E-09 59.3 6.1 92 66-158 2-98 (266)
122 COG3319 Thioesterase domains o 97.6 0.0002 4.3E-09 57.9 7.1 77 67-158 1-79 (257)
123 PF08538 DUF1749: Protein of u 97.6 0.00067 1.5E-08 56.0 10.3 80 65-155 32-119 (303)
124 PF12048 DUF3530: Protein of u 97.5 0.00071 1.5E-08 56.0 9.4 112 44-157 62-206 (310)
125 PRK06765 homoserine O-acetyltr 97.5 5.6E-05 1.2E-09 64.4 2.5 90 64-158 54-175 (389)
126 PRK10252 entF enterobactin syn 97.5 0.0003 6.6E-09 67.0 7.7 80 65-158 1067-1147(1296)
127 COG0400 Predicted esterase [Ge 97.5 0.00016 3.5E-09 56.6 4.9 88 66-158 18-113 (207)
128 PF02230 Abhydrolase_2: Phosph 97.5 8.3E-05 1.8E-09 57.7 2.8 86 65-158 13-119 (216)
129 PLN02733 phosphatidylcholine-s 97.4 0.00019 4E-09 62.2 5.0 69 78-158 106-176 (440)
130 PF05728 UPF0227: Uncharacteri 97.4 0.0003 6.5E-09 54.2 5.6 68 69-158 2-73 (187)
131 PF00135 COesterase: Carboxyle 97.4 6.7E-05 1.4E-09 64.8 2.1 98 51-157 105-221 (535)
132 COG1505 Serine proteases of th 97.4 0.00074 1.6E-08 60.1 8.0 112 41-158 391-514 (648)
133 COG1770 PtrB Protease II [Amin 97.2 0.0014 3.1E-08 58.8 8.0 111 42-157 417-540 (682)
134 COG3208 GrsT Predicted thioest 97.2 0.00073 1.6E-08 54.1 5.5 83 64-158 5-88 (244)
135 COG2021 MET2 Homoserine acetyl 97.2 0.00089 1.9E-08 56.5 5.9 91 64-158 49-161 (368)
136 COG3946 VirJ Type IV secretory 97.2 0.0032 7E-08 53.9 9.0 78 66-156 260-338 (456)
137 PRK10439 enterobactin/ferric e 97.1 0.0056 1.2E-07 52.6 10.4 103 45-158 181-302 (411)
138 COG3571 Predicted hydrolase of 97.1 0.0018 3.9E-08 49.3 6.0 89 60-158 6-103 (213)
139 KOG2984 Predicted hydrolase [G 97.0 0.0055 1.2E-07 48.4 8.4 84 66-158 42-128 (277)
140 KOG1553 Predicted alpha/beta h 97.0 0.0022 4.8E-08 54.1 6.6 102 42-157 212-324 (517)
141 TIGR01849 PHB_depoly_PhaZ poly 96.9 0.0066 1.4E-07 52.2 9.2 77 67-157 103-181 (406)
142 PF06821 Ser_hydrolase: Serine 96.9 0.001 2.2E-08 50.5 3.7 66 69-157 1-68 (171)
143 PF03583 LIP: Secretory lipase 96.9 0.0016 3.5E-08 53.3 5.0 56 93-157 24-84 (290)
144 KOG4627 Kynurenine formamidase 96.9 0.0043 9.3E-08 49.0 7.0 88 55-158 57-150 (270)
145 COG3243 PhaC Poly(3-hydroxyalk 96.9 0.0016 3.4E-08 56.0 4.8 79 67-157 108-194 (445)
146 COG4782 Uncharacterized protei 96.7 0.0042 9.2E-08 52.4 6.3 85 66-157 116-204 (377)
147 COG1075 LipA Predicted acetylt 96.7 0.0043 9.2E-08 51.9 6.1 78 67-157 60-140 (336)
148 KOG3724 Negative regulator of 96.6 0.0047 1E-07 56.7 6.3 84 66-158 89-196 (973)
149 PF10340 DUF2424: Protein of u 96.6 0.015 3.3E-07 49.4 9.0 91 58-158 108-209 (374)
150 COG4814 Uncharacterized protei 96.5 0.0036 7.9E-08 50.6 4.0 84 68-156 47-148 (288)
151 PF03959 FSH1: Serine hydrolas 96.4 0.00087 1.9E-08 52.2 0.3 39 65-105 3-45 (212)
152 PF00756 Esterase: Putative es 96.3 0.003 6.4E-08 49.4 2.8 26 133-158 101-129 (251)
153 PRK04940 hypothetical protein; 96.2 0.012 2.6E-07 45.2 5.5 15 144-158 60-74 (180)
154 PF06028 DUF915: Alpha/beta hy 96.1 0.0064 1.4E-07 49.1 3.7 92 66-157 11-116 (255)
155 KOG1516 Carboxylesterase and r 96.1 0.013 2.8E-07 51.4 5.8 82 66-157 112-208 (545)
156 KOG3101 Esterase D [General fu 95.9 0.029 6.4E-07 44.6 6.3 38 66-104 44-83 (283)
157 KOG2541 Palmitoyl protein thio 95.8 0.046 9.9E-07 44.7 7.3 79 67-158 24-106 (296)
158 PLN02606 palmitoyl-protein thi 95.6 0.055 1.2E-06 44.8 7.2 78 66-157 26-108 (306)
159 KOG3975 Uncharacterized conser 95.6 0.069 1.5E-06 43.4 7.5 99 55-157 17-123 (301)
160 PF05577 Peptidase_S28: Serine 95.5 0.015 3.3E-07 49.8 3.8 92 66-158 29-127 (434)
161 PF07082 DUF1350: Protein of u 95.4 0.14 3E-06 41.4 8.5 87 58-157 8-103 (250)
162 smart00824 PKS_TE Thioesterase 95.3 0.064 1.4E-06 39.7 6.3 67 77-158 10-78 (212)
163 COG3150 Predicted esterase [Ge 95.0 0.083 1.8E-06 40.4 6.0 33 123-158 41-73 (191)
164 COG2819 Predicted hydrolase of 95.0 0.12 2.7E-06 41.9 7.4 15 143-157 136-150 (264)
165 PF02450 LCAT: Lecithin:choles 95.0 0.044 9.6E-07 46.6 5.0 62 81-158 66-133 (389)
166 PF04083 Abhydro_lipase: Parti 94.9 0.051 1.1E-06 34.6 3.9 46 36-81 4-58 (63)
167 PF01764 Lipase_3: Lipase (cla 94.6 0.02 4.3E-07 40.8 1.7 30 129-158 48-78 (140)
168 COG4099 Predicted peptidase [G 94.5 0.3 6.6E-06 40.8 8.6 103 44-157 160-282 (387)
169 PTZ00472 serine carboxypeptida 94.4 0.18 4E-06 43.9 7.5 100 54-158 61-185 (462)
170 cd00519 Lipase_3 Lipase (class 93.7 0.044 9.5E-07 42.7 2.2 31 128-158 111-142 (229)
171 PLN02633 palmitoyl protein thi 93.5 0.34 7.4E-06 40.3 7.1 78 67-157 26-107 (314)
172 PF02089 Palm_thioest: Palmito 93.4 0.18 3.8E-06 41.4 5.2 86 64-157 3-93 (279)
173 KOG4840 Predicted hydrolases o 93.3 0.53 1.1E-05 37.9 7.6 78 67-155 37-118 (299)
174 COG0627 Predicted esterase [Ge 93.1 0.15 3.3E-06 42.4 4.5 39 65-104 53-93 (316)
175 KOG2565 Predicted hydrolases o 92.9 0.52 1.1E-05 40.4 7.3 91 55-157 135-242 (469)
176 PF11187 DUF2974: Protein of u 92.8 0.41 8.8E-06 37.9 6.3 26 133-158 70-98 (224)
177 KOG2112 Lysophospholipase [Lip 92.6 0.45 9.7E-06 37.3 6.2 90 67-158 4-107 (206)
178 PLN02517 phosphatidylcholine-s 92.2 0.25 5.5E-06 44.6 4.9 67 82-157 158-226 (642)
179 KOG2551 Phospholipase/carboxyh 91.7 0.24 5.1E-06 39.4 3.7 90 65-158 4-118 (230)
180 COG3545 Predicted esterase of 91.4 0.78 1.7E-05 35.3 6.2 31 123-157 42-72 (181)
181 KOG2369 Lecithin:cholesterol a 91.0 0.81 1.8E-05 40.1 6.6 67 80-157 124-195 (473)
182 KOG4388 Hormone-sensitive lipa 90.6 0.59 1.3E-05 42.3 5.5 85 55-157 384-482 (880)
183 PLN02454 triacylglycerol lipas 90.4 0.2 4.4E-06 43.2 2.4 33 126-158 207-242 (414)
184 KOG2183 Prolylcarboxypeptidase 90.2 3.9 8.4E-05 35.7 9.9 86 67-158 81-181 (492)
185 KOG4372 Predicted alpha/beta h 90.0 0.42 9.1E-06 41.0 4.0 84 66-158 80-164 (405)
186 PLN02310 triacylglycerol lipas 89.4 0.2 4.3E-06 43.1 1.6 32 127-158 191-223 (405)
187 PLN03037 lipase class 3 family 89.2 0.2 4.3E-06 44.4 1.5 33 126-158 299-332 (525)
188 PF11339 DUF3141: Protein of u 89.1 1.5 3.2E-05 39.2 6.7 79 64-157 67-153 (581)
189 COG3673 Uncharacterized conser 88.8 2.5 5.4E-05 35.7 7.6 89 66-158 31-136 (423)
190 PLN02934 triacylglycerol lipas 87.8 0.37 8E-06 42.6 2.2 29 130-158 306-335 (515)
191 PLN02571 triacylglycerol lipas 87.5 0.28 6.1E-06 42.3 1.3 30 129-158 208-240 (413)
192 PLN02847 triacylglycerol lipas 87.3 1.1 2.5E-05 40.4 5.0 18 141-158 248-265 (633)
193 PLN00413 triacylglycerol lipas 87.2 0.4 8.6E-06 42.1 2.1 28 131-158 270-298 (479)
194 PF11288 DUF3089: Protein of u 86.8 0.63 1.4E-05 36.5 2.8 60 93-157 43-108 (207)
195 KOG2931 Differentiation-relate 86.8 9.4 0.0002 31.9 9.7 102 44-156 22-134 (326)
196 PLN02162 triacylglycerol lipas 86.6 0.46 1E-05 41.6 2.1 29 130-158 263-292 (475)
197 PF03096 Ndr: Ndr family; Int 86.4 2 4.4E-05 35.3 5.6 100 48-156 3-111 (283)
198 PF05705 DUF829: Eukaryotic pr 86.4 4.9 0.00011 31.3 7.8 75 69-157 2-80 (240)
199 PLN02408 phospholipase A1 86.1 0.38 8.3E-06 40.9 1.4 30 129-158 182-214 (365)
200 PLN02324 triacylglycerol lipas 85.5 0.56 1.2E-05 40.5 2.1 32 127-158 195-229 (415)
201 PLN02719 triacylglycerol lipas 84.7 0.61 1.3E-05 41.3 2.0 32 127-158 275-312 (518)
202 PLN02802 triacylglycerol lipas 83.7 0.7 1.5E-05 40.9 1.9 30 129-158 312-344 (509)
203 PLN02753 triacylglycerol lipas 82.7 0.86 1.9E-05 40.5 2.1 31 128-158 290-326 (531)
204 PF01083 Cutinase: Cutinase; 82.4 0.86 1.9E-05 34.6 1.8 30 128-157 64-94 (179)
205 COG2382 Fes Enterochelin ester 81.6 14 0.0003 30.7 8.6 87 64-158 96-191 (299)
206 PLN02761 lipase class 3 family 79.9 0.98 2.1E-05 40.1 1.5 31 128-158 271-308 (527)
207 KOG4569 Predicted lipase [Lipi 76.7 1.3 2.9E-05 37.0 1.3 28 131-158 157-185 (336)
208 KOG3253 Predicted alpha/beta h 74.4 15 0.00034 33.6 7.3 79 66-158 176-264 (784)
209 PF00450 Peptidase_S10: Serine 74.1 34 0.00073 28.5 9.2 99 55-157 25-149 (415)
210 PF05576 Peptidase_S37: PS-10 73.2 62 0.0013 28.4 10.5 138 6-158 6-148 (448)
211 PF09994 DUF2235: Uncharacteri 72.9 3.4 7.3E-05 33.6 2.8 32 127-158 73-106 (277)
212 PF08237 PE-PPE: PE-PPE domain 71.6 6.5 0.00014 31.1 4.0 30 128-158 33-62 (225)
213 PF06441 EHN: Epoxide hydrolas 71.3 11 0.00023 26.7 4.7 37 47-83 71-109 (112)
214 COG2185 Sbm Methylmalonyl-CoA 71.3 39 0.00085 25.0 8.8 77 64-147 10-96 (143)
215 COG5153 CVT17 Putative lipase 70.8 3.2 7E-05 34.6 2.2 17 142-158 274-290 (425)
216 KOG4540 Putative lipase essent 70.8 3.2 7E-05 34.6 2.2 17 142-158 274-290 (425)
217 PF06259 Abhydrolase_8: Alpha/ 66.2 7.9 0.00017 29.6 3.4 30 128-157 91-122 (177)
218 KOG3967 Uncharacterized conser 66.0 45 0.00097 26.9 7.6 15 143-157 189-203 (297)
219 PF06309 Torsin: Torsin; Inte 63.6 11 0.00023 27.4 3.5 45 58-104 43-90 (127)
220 KOG4389 Acetylcholinesterase/B 62.7 8.2 0.00018 34.5 3.2 28 129-156 197-230 (601)
221 COG1073 Hydrolases of the alph 62.5 16 0.00035 28.1 4.6 48 54-103 31-84 (299)
222 PF04301 DUF452: Protein of un 61.2 7.3 0.00016 30.7 2.4 15 143-157 56-70 (213)
223 cd03818 GT1_ExpC_like This fam 60.8 13 0.00028 30.9 4.1 33 69-105 2-34 (396)
224 PF05277 DUF726: Protein of un 58.2 12 0.00025 31.8 3.3 16 142-157 218-233 (345)
225 PLN03016 sinapoylglucose-malat 55.5 1.4E+02 0.003 25.9 10.0 29 129-157 146-178 (433)
226 KOG2182 Hydrolytic enzymes of 53.3 40 0.00086 30.1 5.8 88 65-158 85-186 (514)
227 KOG2029 Uncharacterized conser 52.6 15 0.00033 33.5 3.2 31 128-158 507-540 (697)
228 KOG2872 Uroporphyrinogen decar 51.4 84 0.0018 26.4 7.1 30 66-104 252-281 (359)
229 COG0431 Predicted flavoprotein 51.3 50 0.0011 24.9 5.6 59 77-156 53-113 (184)
230 PRK06490 glutamine amidotransf 50.4 40 0.00087 26.7 5.1 83 67-157 9-98 (239)
231 PF11144 DUF2920: Protein of u 47.5 14 0.00031 31.9 2.2 31 128-158 163-198 (403)
232 COG3340 PepE Peptidase E [Amin 46.4 52 0.0011 26.2 5.0 39 65-105 31-72 (224)
233 COG0529 CysC Adenylylsulfate k 46.1 52 0.0011 25.6 4.8 37 65-103 21-59 (197)
234 COG3727 Vsr DNA G:T-mismatch r 45.2 37 0.00081 25.0 3.7 35 65-101 56-114 (150)
235 TIGR02690 resist_ArsH arsenica 44.6 76 0.0017 25.0 5.8 26 129-155 107-139 (219)
236 TIGR02873 spore_ylxY probable 44.2 23 0.00051 28.7 2.9 34 67-102 231-264 (268)
237 PF03283 PAE: Pectinacetyleste 42.8 21 0.00046 30.2 2.5 29 128-156 137-168 (361)
238 cd03146 GAT1_Peptidase_E Type 42.6 1.1E+02 0.0024 23.5 6.4 38 65-104 30-69 (212)
239 TIGR03623 probable DNA repair 42.5 96 0.0021 29.3 7.0 34 65-100 160-193 (874)
240 TIGR03709 PPK2_rel_1 polyphosp 42.0 45 0.00098 27.1 4.2 37 65-103 54-92 (264)
241 COG1506 DAP2 Dipeptidyl aminop 41.9 1.2E+02 0.0026 27.4 7.3 62 66-141 551-616 (620)
242 COG2939 Carboxypeptidase C (ca 41.5 1.3E+02 0.0028 26.9 7.1 97 56-157 87-211 (498)
243 PF01656 CbiA: CobQ/CobB/MinD/ 40.6 47 0.001 24.3 3.9 33 70-104 2-36 (195)
244 cd03805 GT1_ALG2_like This fam 40.4 36 0.00078 27.8 3.5 32 69-102 3-37 (392)
245 TIGR02884 spore_pdaA delta-lac 39.8 34 0.00075 26.6 3.1 35 66-102 186-221 (224)
246 PF00698 Acyl_transf_1: Acyl t 39.3 16 0.00034 29.9 1.2 23 133-155 73-95 (318)
247 PLN02335 anthranilate synthase 39.3 1E+02 0.0023 24.0 5.8 35 64-103 16-50 (222)
248 KOG2385 Uncharacterized conser 39.2 34 0.00073 30.9 3.2 18 140-157 443-460 (633)
249 TIGR02764 spore_ybaN_pdaB poly 39.0 26 0.00056 26.3 2.3 34 67-102 152-188 (191)
250 KOG1202 Animal-type fatty acid 39.0 55 0.0012 33.0 4.7 74 64-158 2121-2196(2376)
251 cd05312 NAD_bind_1_malic_enz N 38.7 1.1E+02 0.0023 25.3 5.9 82 68-157 26-119 (279)
252 COG1255 Uncharacterized protei 38.7 30 0.00064 25.0 2.3 23 81-105 24-46 (129)
253 PF13439 Glyco_transf_4: Glyco 38.5 24 0.00052 24.7 1.9 30 74-105 10-39 (177)
254 COG0541 Ffh Signal recognition 37.3 2.8E+02 0.006 24.5 8.4 35 65-101 98-134 (451)
255 TIGR00632 vsr DNA mismatch end 37.1 51 0.0011 23.5 3.4 15 85-101 99-113 (117)
256 PF10686 DUF2493: Protein of u 37.0 58 0.0012 20.9 3.4 34 65-101 30-63 (71)
257 PF01583 APS_kinase: Adenylyls 36.8 71 0.0015 23.8 4.3 37 66-104 1-39 (156)
258 TIGR03707 PPK2_P_aer polyphosp 36.6 62 0.0013 25.8 4.1 37 65-103 29-67 (230)
259 PF05706 CDKN3: Cyclin-depende 35.7 1.3E+02 0.0029 22.8 5.6 9 148-156 136-144 (168)
260 PF03446 NAD_binding_2: NAD bi 35.7 32 0.00069 25.2 2.2 29 74-104 5-33 (163)
261 cd04962 GT1_like_5 This family 35.5 57 0.0012 26.2 3.9 33 69-103 5-37 (371)
262 PRK05282 (alpha)-aspartyl dipe 35.3 2.3E+02 0.0049 22.5 7.5 38 65-104 30-70 (233)
263 TIGR01303 IMP_DH_rel_1 IMP deh 35.3 1.2E+02 0.0026 26.8 6.1 31 76-108 220-250 (475)
264 PF12242 Eno-Rase_NADH_b: NAD( 34.9 54 0.0012 21.8 3.0 31 124-154 16-50 (78)
265 COG3233 Predicted deacetylase 34.7 2.4E+02 0.0052 22.6 7.4 40 67-108 4-49 (233)
266 cd01523 RHOD_Lact_B Member of 34.5 78 0.0017 20.7 3.9 36 64-107 60-95 (100)
267 TIGR00223 panD L-aspartate-alp 34.4 1.8E+02 0.0039 21.1 6.8 54 38-103 35-90 (126)
268 PRK06171 sorbitol-6-phosphate 34.4 1.9E+02 0.0042 22.2 6.7 76 69-154 11-86 (266)
269 PF13207 AAA_17: AAA domain; P 34.2 42 0.0009 22.7 2.6 31 69-103 1-32 (121)
270 cd06919 Asp_decarbox Aspartate 34.1 1.7E+02 0.0037 20.7 6.8 54 38-103 34-89 (111)
271 PHA02519 plasmid partition pro 33.9 65 0.0014 27.5 4.1 36 66-103 105-143 (387)
272 cd01521 RHOD_PspE2 Member of t 32.6 1.1E+02 0.0023 20.6 4.4 33 64-100 63-95 (110)
273 PRK05368 homoserine O-succinyl 32.5 21 0.00046 29.6 0.9 26 129-157 122-147 (302)
274 KOG2170 ATPase of the AAA+ sup 32.5 25 0.00054 29.6 1.3 46 57-104 99-147 (344)
275 TIGR01425 SRP54_euk signal rec 32.4 3.4E+02 0.0074 23.7 8.7 37 65-103 98-136 (429)
276 TIGR03371 cellulose_yhjQ cellu 32.0 98 0.0021 23.7 4.6 35 68-104 3-39 (246)
277 TIGR02069 cyanophycinase cyano 31.6 2.7E+02 0.0058 22.2 7.5 39 65-105 27-67 (250)
278 PF00326 Peptidase_S9: Prolyl 31.5 2.2E+02 0.0047 21.2 7.2 41 65-107 143-187 (213)
279 PRK07053 glutamine amidotransf 31.2 89 0.0019 24.6 4.3 34 67-105 4-37 (234)
280 PRK13869 plasmid-partitioning 31.2 73 0.0016 27.3 4.0 35 68-104 122-159 (405)
281 PF08250 Sperm_act_pep: Sperm- 30.8 16 0.00036 14.8 0.0 7 150-156 1-7 (10)
282 TIGR01305 GMP_reduct_1 guanosi 30.7 2E+02 0.0042 24.5 6.3 32 76-109 102-135 (343)
283 PRK13230 nitrogenase reductase 30.7 1E+02 0.0022 24.5 4.6 34 69-105 4-39 (279)
284 cd01983 Fer4_NifH The Fer4_Nif 30.5 95 0.0021 19.3 3.7 31 70-102 2-34 (99)
285 TIGR02964 xanthine_xdhC xanthi 30.4 2.8E+02 0.0061 22.1 8.2 35 65-105 99-133 (246)
286 PLN02209 serine carboxypeptida 30.2 3.7E+02 0.008 23.4 10.4 30 128-157 147-180 (437)
287 TIGR03131 malonate_mdcH malona 29.9 39 0.00085 27.1 2.1 24 133-156 65-88 (295)
288 PRK12467 peptide synthase; Pro 29.7 1.5E+02 0.0032 33.1 6.6 80 66-158 3692-3771(3956)
289 PHA02518 ParA-like protein; Pr 29.5 93 0.002 23.1 4.0 33 70-104 4-38 (211)
290 KOG1551 Uncharacterized conser 29.4 34 0.00074 28.5 1.6 27 132-158 183-209 (371)
291 COG0505 CarA Carbamoylphosphat 29.4 1.1E+02 0.0025 26.1 4.7 74 67-156 180-261 (368)
292 PF03853 YjeF_N: YjeF-related 29.4 57 0.0012 24.2 2.8 37 65-103 24-60 (169)
293 PRK12744 short chain dehydroge 28.9 2.7E+02 0.0057 21.3 7.9 33 69-105 10-42 (257)
294 PF08255 Leader_Trp: Trp-opero 28.9 34 0.00073 15.2 0.8 11 67-77 2-12 (14)
295 PRK06756 flavodoxin; Provision 28.4 1.4E+02 0.0031 21.2 4.7 35 68-104 4-39 (148)
296 smart00827 PKS_AT Acyl transfe 28.2 46 0.001 26.5 2.2 24 133-156 71-94 (298)
297 TIGR01378 thi_PPkinase thiamin 28.0 70 0.0015 24.6 3.1 29 127-156 71-99 (203)
298 KOG3349 Predicted glycosyltran 27.7 91 0.002 23.7 3.5 19 80-100 114-132 (170)
299 PRK09072 short chain dehydroge 27.6 1.1E+02 0.0023 23.7 4.2 31 69-103 7-37 (263)
300 COG0552 FtsY Signal recognitio 27.5 1.2E+02 0.0026 25.7 4.6 36 64-101 136-173 (340)
301 PRK13236 nitrogenase reductase 27.3 1.1E+02 0.0023 24.9 4.2 35 68-104 7-43 (296)
302 PF14253 AbiH: Bacteriophage a 27.2 36 0.00078 26.8 1.4 13 143-155 234-246 (270)
303 PRK12824 acetoacetyl-CoA reduc 26.6 1.1E+02 0.0025 22.9 4.1 31 69-103 4-34 (245)
304 KOG1199 Short-chain alcohol de 26.3 2.6E+02 0.0056 21.9 5.8 79 68-155 10-93 (260)
305 cd02067 B12-binding B12 bindin 26.3 2.1E+02 0.0046 19.4 8.9 64 80-150 14-87 (119)
306 cd02032 Bchl_like This family 26.2 1.2E+02 0.0025 23.9 4.2 29 74-104 7-37 (267)
307 TIGR03840 TMPT_Se_Te thiopurin 26.1 51 0.0011 25.6 2.1 18 85-104 48-65 (213)
308 cd08171 GlyDH-like2 Glycerol d 26.0 2.2E+02 0.0049 23.5 6.0 38 67-106 23-60 (345)
309 TIGR02802 Pal_lipo peptidoglyc 26.0 1.6E+02 0.0034 19.6 4.3 24 129-152 17-40 (104)
310 PRK05844 pyruvate flavodoxin o 25.1 1.4E+02 0.003 22.5 4.3 34 70-105 4-39 (186)
311 PF15142 INCA1: INCA1 25.0 26 0.00057 26.1 0.2 38 2-39 2-40 (178)
312 TIGR01287 nifH nitrogenase iro 24.8 1.3E+02 0.0029 23.7 4.3 32 71-104 4-37 (275)
313 PF03681 UPF0150: Uncharacteri 24.8 88 0.0019 17.9 2.5 13 93-105 11-23 (48)
314 PRK10802 peptidoglycan-associa 24.8 1.5E+02 0.0032 22.3 4.3 24 129-152 86-109 (173)
315 PRK00889 adenylylsulfate kinas 24.8 1.9E+02 0.0042 20.9 4.9 35 66-102 3-39 (175)
316 PRK08177 short chain dehydroge 24.7 1.3E+02 0.0029 22.5 4.2 19 83-103 15-33 (225)
317 COG4822 CbiK Cobalamin biosynt 24.6 3.8E+02 0.0081 21.6 7.0 36 66-103 138-175 (265)
318 PLN02213 sinapoylglucose-malat 24.6 1.9E+02 0.004 23.8 5.2 56 97-157 3-64 (319)
319 PRK05449 aspartate alpha-decar 24.4 2.8E+02 0.0061 20.1 6.9 53 39-103 36-90 (126)
320 PRK05096 guanosine 5'-monophos 24.4 2.7E+02 0.0059 23.7 6.1 31 76-108 103-135 (346)
321 cd03416 CbiX_SirB_N Sirohydroc 24.4 2.2E+02 0.0047 18.8 6.0 23 68-90 2-26 (101)
322 TIGR01302 IMP_dehydrog inosine 24.4 2.9E+02 0.0062 24.0 6.5 36 71-108 214-249 (450)
323 cd02037 MRP-like MRP (Multiple 24.4 1.3E+02 0.0028 21.8 3.9 12 94-105 66-77 (169)
324 cd00532 MGS-like MGS-like doma 24.2 1.3E+02 0.0028 20.6 3.7 29 69-101 3-31 (112)
325 PRK13256 thiopurine S-methyltr 24.2 54 0.0012 26.0 1.8 18 85-104 57-74 (226)
326 cd02036 MinD Bacterial cell di 24.2 1.1E+02 0.0023 22.0 3.4 32 71-104 4-37 (179)
327 PRK08339 short chain dehydroge 24.1 1.3E+02 0.0028 23.5 4.0 31 69-103 10-40 (263)
328 TIGR03453 partition_RepA plasm 23.8 1.2E+02 0.0026 25.6 4.0 36 67-104 104-142 (387)
329 TIGR01281 DPOR_bchL light-inde 23.6 1.5E+02 0.0032 23.3 4.3 29 74-104 7-37 (268)
330 COG0518 GuaA GMP synthase - Gl 23.5 96 0.0021 24.0 3.1 24 68-96 3-26 (198)
331 CHL00175 minD septum-site dete 23.4 2E+02 0.0043 22.8 5.0 36 67-104 16-53 (281)
332 COG0859 RfaF ADP-heptose:LPS h 23.3 1.6E+02 0.0034 24.3 4.6 34 66-101 175-214 (334)
333 PRK13143 hisH imidazole glycer 23.2 3.3E+02 0.0073 20.5 6.3 19 82-102 13-31 (200)
334 PF03949 Malic_M: Malic enzyme 23.2 1.2E+02 0.0025 24.7 3.6 67 84-157 43-120 (255)
335 cd03816 GT1_ALG1_like This fam 23.2 1.8E+02 0.0039 24.6 5.0 36 68-105 6-41 (415)
336 TIGR03708 poly_P_AMP_trns poly 23.1 1.6E+02 0.0035 26.2 4.8 40 64-105 37-78 (493)
337 PF14606 Lipase_GDSL_3: GDSL-l 23.0 2E+02 0.0043 22.0 4.7 28 123-150 72-100 (178)
338 PRK13255 thiopurine S-methyltr 23.0 62 0.0013 25.2 2.0 18 85-104 51-68 (218)
339 cd03144 GATase1_ScBLP_like Typ 22.8 45 0.00097 23.6 1.0 14 145-158 77-90 (114)
340 PRK06101 short chain dehydroge 22.7 1.6E+02 0.0036 22.3 4.4 30 69-102 3-32 (240)
341 PF09370 TIM-br_sig_trns: TIM- 22.7 2.1E+02 0.0046 23.5 5.0 61 84-157 161-224 (268)
342 PRK12828 short chain dehydroge 22.7 1.4E+02 0.0031 22.2 4.0 31 69-103 9-39 (239)
343 PRK08265 short chain dehydroge 22.7 1.4E+02 0.0031 23.0 4.1 31 69-103 8-38 (261)
344 PF03976 PPK2: Polyphosphate k 22.7 57 0.0012 25.9 1.7 37 66-104 30-68 (228)
345 TIGR00128 fabD malonyl CoA-acy 22.6 64 0.0014 25.5 2.0 22 134-155 72-94 (290)
346 PRK10867 signal recognition pa 22.6 5.2E+02 0.011 22.5 8.6 37 65-103 98-137 (433)
347 cd04950 GT1_like_1 Glycosyltra 22.3 1.7E+02 0.0037 24.2 4.6 38 66-105 4-43 (373)
348 PRK12748 3-ketoacyl-(acyl-carr 22.2 1.4E+02 0.0031 22.8 3.9 35 68-104 6-40 (256)
349 PHA01735 hypothetical protein 22.2 75 0.0016 20.7 1.9 20 123-142 27-46 (76)
350 COG2820 Udp Uridine phosphoryl 22.1 67 0.0015 26.0 2.0 32 65-100 57-88 (248)
351 PRK07523 gluconate 5-dehydroge 22.1 1.5E+02 0.0033 22.7 4.0 31 69-103 12-42 (255)
352 KOG3035 Isoamyl acetate-hydrol 22.1 1.6E+02 0.0036 23.6 4.1 81 67-150 37-122 (245)
353 TIGR02016 BchX chlorophyllide 22.0 1.6E+02 0.0035 24.0 4.3 29 74-104 7-37 (296)
354 PRK06843 inosine 5-monophospha 21.9 3.7E+02 0.008 23.3 6.6 30 77-108 149-178 (404)
355 PRK06483 dihydromonapterin red 21.9 1.6E+02 0.0036 22.1 4.2 31 69-103 4-34 (236)
356 COG0853 PanD Aspartate 1-decar 21.9 3.2E+02 0.0069 19.8 6.8 52 40-103 36-89 (126)
357 COG1709 Predicted transcriptio 21.8 2.1E+02 0.0045 23.0 4.6 33 55-90 184-216 (241)
358 KOG1282 Serine carboxypeptidas 21.8 5.6E+02 0.012 22.6 9.4 35 123-157 143-181 (454)
359 PRK06895 putative anthranilate 21.8 1.2E+02 0.0026 22.8 3.3 23 80-104 12-34 (190)
360 cd02040 NifH NifH gene encodes 21.6 1.9E+02 0.0041 22.5 4.6 34 69-105 4-39 (270)
361 cd01653 GATase1 Type 1 glutami 21.6 2.1E+02 0.0045 17.6 4.2 75 81-157 13-91 (115)
362 PRK08703 short chain dehydroge 21.5 1.7E+02 0.0037 22.1 4.2 30 69-102 8-37 (239)
363 PRK13705 plasmid-partitioning 21.4 1.2E+02 0.0026 25.9 3.5 36 66-103 105-143 (388)
364 cd03131 GATase1_HTS Type 1 glu 21.3 14 0.00029 28.2 -2.0 26 129-157 85-110 (175)
365 PRK06603 enoyl-(acyl carrier p 21.2 1.7E+02 0.0037 22.7 4.2 33 68-102 9-41 (260)
366 PRK14029 pyruvate/ketoisovaler 21.1 1.5E+02 0.0033 22.3 3.7 34 70-105 4-39 (185)
367 cd07025 Peptidase_S66 LD-Carbo 21.1 2.9E+02 0.0064 22.2 5.7 23 80-104 14-36 (282)
368 PF06564 YhjQ: YhjQ protein; 21.1 1.4E+02 0.003 24.0 3.6 34 69-104 3-39 (243)
369 PRK07326 short chain dehydroge 21.0 1.6E+02 0.0035 22.1 3.9 30 69-102 8-37 (237)
370 COG2885 OmpA Outer membrane pr 21.0 1.7E+02 0.0036 21.9 4.0 26 127-152 98-123 (190)
371 PRK06200 2,3-dihydroxy-2,3-dih 21.0 1.7E+02 0.0038 22.5 4.2 30 69-102 8-37 (263)
372 TIGR03712 acc_sec_asp2 accesso 20.8 4.7E+02 0.01 23.5 7.1 86 58-156 279-369 (511)
373 PRK12745 3-ketoacyl-(acyl-carr 20.7 1.8E+02 0.0039 22.1 4.2 32 69-104 4-35 (256)
374 cd02033 BchX Chlorophyllide re 20.7 2.3E+02 0.0049 23.8 5.0 37 66-104 30-68 (329)
375 PLN03050 pyridoxine (pyridoxam 20.6 1.9E+02 0.0041 23.1 4.4 34 67-102 61-94 (246)
376 COG0794 GutQ Predicted sugar p 20.6 1.4E+02 0.0031 23.3 3.5 76 70-150 42-121 (202)
377 PRK08643 acetoin reductase; Va 20.5 1.7E+02 0.0037 22.3 4.1 19 83-103 16-34 (256)
378 PRK06114 short chain dehydroge 20.4 1.3E+02 0.0028 23.1 3.4 21 81-103 20-40 (254)
379 KOG2941 Beta-1,4-mannosyltrans 20.4 2.2E+02 0.0047 24.8 4.7 40 64-105 11-50 (444)
380 PRK06194 hypothetical protein; 20.4 1.7E+02 0.0037 22.8 4.1 31 69-103 8-38 (287)
381 PRK05876 short chain dehydroge 20.2 1.7E+02 0.0037 23.1 4.0 31 69-103 8-38 (275)
382 PF01075 Glyco_transf_9: Glyco 20.2 1.8E+02 0.004 22.2 4.2 35 65-101 104-143 (247)
383 PRK08085 gluconate 5-dehydroge 20.1 1.7E+02 0.0037 22.3 4.0 31 69-103 11-41 (254)
384 COG2312 Erythromycin esterase 20.0 1.4E+02 0.0031 25.9 3.7 83 66-152 44-146 (405)
385 PRK07067 sorbitol dehydrogenas 20.0 1.7E+02 0.0037 22.4 4.0 30 69-102 8-37 (257)
386 cd01635 Glycosyltransferase_GT 20.0 1.4E+02 0.003 21.5 3.3 24 77-102 14-37 (229)
No 1
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.83 E-value=5.5e-20 Score=146.26 Aligned_cols=113 Identities=26% Similarity=0.427 Sum_probs=92.8
Q ss_pred ceeEEEeeCCceEEEEEEcCC---CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC--CCCCCC---HHHH
Q 031524 44 FKKIQIQRDDTTFDAYVVGKE---DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR--GKVGLD---TAEA 115 (158)
Q Consensus 44 ~~~i~i~~~~~~l~~~~~~p~---~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g--G~~~~~---~~~~ 115 (158)
.++++++++++.+.+|+..|. +.|+||++|+++|.+.+++++|++|| ++||.|++||+|+ +..... ..+.
T Consensus 2 ~~~v~~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA--~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~ 79 (236)
T COG0412 2 GTDVTIPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLA--KAGYVVLAPDLYGRQGDPTDIEDEPAEL 79 (236)
T ss_pred CcceEeeCCCceEeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHH--hCCcEEEechhhccCCCCCcccccHHHH
Confidence 367899999999999999983 24899999999999999999999999 9999999999997 433221 2222
Q ss_pred HH-HHcCCChhhHHHHHHHHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 116 QH-LMSGLDWPGAVKDIHASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 116 ~~-~~~~~~~~~~~~di~~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
.. .+.+.++.....|+.++++||++++ .++|+++||||||.+|
T Consensus 80 ~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a 126 (236)
T COG0412 80 ETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLA 126 (236)
T ss_pred hhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHH
Confidence 11 2345677788999999999999886 6889999999999864
No 2
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.75 E-value=3.2e-18 Score=133.00 Aligned_cols=101 Identities=30% Similarity=0.482 Sum_probs=78.1
Q ss_pred EEEEEEcCC---CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCC--CCCHHHHHHHHcCC---ChhhH
Q 031524 56 FDAYVVGKE---DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKV--GLDTAEAQHLMSGL---DWPGA 127 (158)
Q Consensus 56 l~~~~~~p~---~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~--~~~~~~~~~~~~~~---~~~~~ 127 (158)
+++|+..|. +.|+||++|+++|.+..++.+|++|+ ++||.|++||+|+|.. ..++.+....+... ..+..
T Consensus 1 ~~ay~~~P~~~~~~~~Vvv~~d~~G~~~~~~~~ad~lA--~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (218)
T PF01738_consen 1 IDAYVARPEGGGPRPAVVVIHDIFGLNPNIRDLADRLA--EEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQV 78 (218)
T ss_dssp EEEEEEEETTSSSEEEEEEE-BTTBS-HHHHHHHHHHH--HTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHH
T ss_pred CeEEEEeCCCCCCCCEEEEEcCCCCCchHHHHHHHHHH--hcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHH
Confidence 578999884 36899999999999999999999999 9999999999998554 44554443333221 24567
Q ss_pred HHHHHHHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 128 VKDIHASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 128 ~~di~~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
.+|+.+++++|++++ .++|+++||||||.+|
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a 112 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLA 112 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHH
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHh
Confidence 899999999999985 5799999999999764
No 3
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.68 E-value=3.1e-16 Score=122.76 Aligned_cols=103 Identities=34% Similarity=0.585 Sum_probs=88.7
Q ss_pred ceEEEEEEcCCCC-CEEEEEcccCCCChH-HHHHHHHHhhcCCCcEEEeeecCCCC---CCCCHHHHHHHHcCCChhhHH
Q 031524 54 TTFDAYVVGKEDA-PGIVVVQEWWGVDFE-IKNHAVKISQLNPGFKALIPDLYRGK---VGLDTAEAQHLMSGLDWPGAV 128 (158)
Q Consensus 54 ~~l~~~~~~p~~~-p~VIllHg~~G~~~~-~~~~A~~La~l~~Gy~V~~~D~~gG~---~~~~~~~~~~~~~~~~~~~~~ 128 (158)
+.+++|+....+. .+||++.+++|.... .+..|+.+| .+||.|++||++.|. ......+..+++.+.+++...
T Consensus 26 ~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A--~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~ 103 (242)
T KOG3043|consen 26 GGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVA--LNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIW 103 (242)
T ss_pred cCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHh--cCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccch
Confidence 4889999986544 489999999999865 889999999 999999999999873 233556677899999999999
Q ss_pred HHHHHHHHHHHhCC-CCcEEEEEeccCCccC
Q 031524 129 KDIHASVNWLKANG-SKKASINNLWNFNRLA 158 (158)
Q Consensus 129 ~di~~av~~l~~~~-~~~I~viG~S~GG~lA 158 (158)
+|+.+.++||++++ ..+||++||||||.++
T Consensus 104 ~~i~~v~k~lk~~g~~kkIGv~GfCwGak~v 134 (242)
T KOG3043|consen 104 KDITAVVKWLKNHGDSKKIGVVGFCWGAKVV 134 (242)
T ss_pred hHHHHHHHHHHHcCCcceeeEEEEeecceEE
Confidence 99999999999886 8999999999999763
No 4
>PRK13604 luxD acyl transferase; Provisional
Probab=99.65 E-value=1e-15 Score=125.83 Aligned_cols=102 Identities=15% Similarity=0.152 Sum_probs=81.6
Q ss_pred EEeeCCc-eEEEEEEcCC-----CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC--CCCCCCHHHHHHHH
Q 031524 48 QIQRDDT-TFDAYVVGKE-----DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR--GKVGLDTAEAQHLM 119 (158)
Q Consensus 48 ~i~~~~~-~l~~~~~~p~-----~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g--G~~~~~~~~~~~~~ 119 (158)
-|.+.++ .|.+|+..|+ +.++||++||+.+...++..+|++|+ ++||.|+.+|+|+ |.++++..+
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La--~~G~~vLrfD~rg~~GeS~G~~~~----- 85 (307)
T PRK13604 13 VICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLS--SNGFHVIRYDSLHHVGLSSGTIDE----- 85 (307)
T ss_pred eEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHH--HCCCEEEEecCCCCCCCCCCcccc-----
Confidence 3556665 9999999984 35899999999998777999999999 9999999999985 566543321
Q ss_pred cCCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 120 SGLDWPGAVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 120 ~~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
.+......|+.++++|+++++.++|+++||||||.+|
T Consensus 86 --~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava 122 (307)
T PRK13604 86 --FTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIA 122 (307)
T ss_pred --CcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHH
Confidence 1222246999999999998877899999999999763
No 5
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.61 E-value=2.9e-15 Score=121.14 Aligned_cols=104 Identities=17% Similarity=0.147 Sum_probs=82.0
Q ss_pred eEEEeeCCceEEEEEEcCC---CCCEEEEEcccCCC----ChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHH
Q 031524 46 KIQIQRDDTTFDAYVVGKE---DAPGIVVVQEWWGV----DFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQH 117 (158)
Q Consensus 46 ~i~i~~~~~~l~~~~~~p~---~~p~VIllHg~~G~----~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~ 117 (158)
.+.++++.+.+.++++.|. +.|+||++||+.+. ...+..+++.|+ ++||.|+++|++| |.+..+.
T Consensus 2 ~~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La--~~Gy~Vl~~Dl~G~G~S~g~~----- 74 (266)
T TIGR03101 2 PFFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFA--AGGFGVLQIDLYGCGDSAGDF----- 74 (266)
T ss_pred CEEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHH--HCCCEEEEECCCCCCCCCCcc-----
Confidence 4677888888888887763 25789999998653 234566899999 9999999999998 7764332
Q ss_pred HHcCCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 118 LMSGLDWPGAVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 118 ~~~~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
...+++.+.+|+..+++++++.+.++|.++||||||.++
T Consensus 75 --~~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vA 113 (266)
T TIGR03101 75 --AAARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLA 113 (266)
T ss_pred --ccCCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHH
Confidence 123677889999999999988767899999999999764
No 6
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.51 E-value=1.8e-13 Score=110.26 Aligned_cols=103 Identities=17% Similarity=0.197 Sum_probs=80.5
Q ss_pred eeEEEeeCCceEEEEEEcCC--CCCEEEEEcccC----CCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHH
Q 031524 45 KKIQIQRDDTTFDAYVVGKE--DAPGIVVVQEWW----GVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQH 117 (158)
Q Consensus 45 ~~i~i~~~~~~l~~~~~~p~--~~p~VIllHg~~----G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~ 117 (158)
+.+.++.++..+.+++..|. +.++||++||.. |....+..+++.|+ ++||.|+++|++| |.+...
T Consensus 3 ~~~~~~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~--~~G~~v~~~Dl~G~G~S~~~------ 74 (274)
T TIGR03100 3 RALTFSCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLA--EAGFPVLRFDYRGMGDSEGE------ 74 (274)
T ss_pred eeEEEEcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHH--HCCCEEEEeCCCCCCCCCCC------
Confidence 46788888889999999885 356888888754 33345667899999 9999999999998 765432
Q ss_pred HHcCCChhhHHHHHHHHHHHHHhC--CCCcEEEEEeccCCccC
Q 031524 118 LMSGLDWPGAVKDIHASVNWLKAN--GSKKASINNLWNFNRLA 158 (158)
Q Consensus 118 ~~~~~~~~~~~~di~~av~~l~~~--~~~~I~viG~S~GG~lA 158 (158)
..+++.+.+|+.++++++++. +.++|.++||||||.++
T Consensus 75 ---~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a 114 (274)
T TIGR03100 75 ---NLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAA 114 (274)
T ss_pred ---CCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHH
Confidence 124556789999999999875 34789999999999763
No 7
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.51 E-value=6e-14 Score=119.70 Aligned_cols=107 Identities=12% Similarity=0.025 Sum_probs=79.5
Q ss_pred CCCCceeEEEeeCCc-eEEEEEEcCC---CCCEEEEEcccCCCC-hHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHH
Q 031524 40 AASPFKKIQIQRDDT-TFDAYVVGKE---DAPGIVVVQEWWGVD-FEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTA 113 (158)
Q Consensus 40 ~~~~~~~i~i~~~~~-~l~~~~~~p~---~~p~VIllHg~~G~~-~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~ 113 (158)
.....++++|+.+++ .+.+|++.|. +.|+||++||+.+.. +.+..+++.|+ ++||+|+++|++| |.+...+
T Consensus 164 ~~~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La--~~Gy~vl~~D~pG~G~s~~~~- 240 (414)
T PRK05077 164 LPGELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLA--PRGIAMLTIDMPSVGFSSKWK- 240 (414)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHH--hCCCEEEEECCCCCCCCCCCC-
Confidence 344678999999888 9999999873 468888888877654 45667889999 9999999999998 7653211
Q ss_pred HHHHHHcCCChhhHHHHHHHHHHHHHhC---CCCcEEEEEeccCCccC
Q 031524 114 EAQHLMSGLDWPGAVKDIHASVNWLKAN---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 114 ~~~~~~~~~~~~~~~~di~~av~~l~~~---~~~~I~viG~S~GG~lA 158 (158)
. ..+. .....++++++.+. +.++|+++||||||.+|
T Consensus 241 ----~--~~d~---~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~A 279 (414)
T PRK05077 241 ----L--TQDS---SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVA 279 (414)
T ss_pred ----c--cccH---HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHH
Confidence 0 0111 12234678888776 36899999999999864
No 8
>PHA02857 monoglyceride lipase; Provisional
Probab=99.49 E-value=2.4e-13 Score=108.21 Aligned_cols=103 Identities=13% Similarity=-0.018 Sum_probs=78.4
Q ss_pred EEeeCCceEEEEEEcCC--CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCCh
Q 031524 48 QIQRDDTTFDAYVVGKE--DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDW 124 (158)
Q Consensus 48 ~i~~~~~~l~~~~~~p~--~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~ 124 (158)
.+..++-.+.++++.|+ +.+.|+++||+.+....+..+++.|+ +.||.|+++|++| |.+.... ....++
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~--~~g~~via~D~~G~G~S~~~~------~~~~~~ 76 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENIS--SLGILVFSHDHIGHGRSNGEK------MMIDDF 76 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHH--hCCCEEEEccCCCCCCCCCcc------CCcCCH
Confidence 34444448999888873 35677777999888888899999999 8999999999999 7764321 111256
Q ss_pred hhHHHHHHHHHHHHHhC-CCCcEEEEEeccCCccC
Q 031524 125 PGAVKDIHASVNWLKAN-GSKKASINNLWNFNRLA 158 (158)
Q Consensus 125 ~~~~~di~~av~~l~~~-~~~~I~viG~S~GG~lA 158 (158)
...++|+...+++++++ +..++.++||||||.+|
T Consensus 77 ~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia 111 (276)
T PHA02857 77 GVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATIS 111 (276)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHH
Confidence 66788888888888654 34689999999999764
No 9
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.49 E-value=1.7e-13 Score=107.40 Aligned_cols=84 Identities=12% Similarity=0.130 Sum_probs=73.5
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCC
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSK 144 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~ 144 (158)
.-+|++|||+.|++..++.+++.|. ++||+|.+|.|+| |..+ + .+-+.++..|.+|+.++.++|++.+.+
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~--e~GyTv~aP~ypGHG~~~---e----~fl~t~~~DW~~~v~d~Y~~L~~~gy~ 85 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLN--ENGYTVYAPRYPGHGTLP---E----DFLKTTPRDWWEDVEDGYRDLKEAGYD 85 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHH--HCCceEecCCCCCCCCCH---H----HHhcCCHHHHHHHHHHHHHHHHHcCCC
Confidence 3799999999999999999999999 9999999999998 6542 1 223458889999999999999988889
Q ss_pred cEEEEEeccCCccC
Q 031524 145 KASINNLWNFNRLA 158 (158)
Q Consensus 145 ~I~viG~S~GG~lA 158 (158)
.|+|+|.||||-+|
T Consensus 86 eI~v~GlSmGGv~a 99 (243)
T COG1647 86 EIAVVGLSMGGVFA 99 (243)
T ss_pred eEEEEeecchhHHH
Confidence 99999999999764
No 10
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.49 E-value=2.8e-13 Score=111.00 Aligned_cols=106 Identities=13% Similarity=-0.007 Sum_probs=78.3
Q ss_pred eeEEEeeCCc-eEEEEEEcCC----CCCEEEEEcccCCCC-hHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHH
Q 031524 45 KKIQIQRDDT-TFDAYVVGKE----DAPGIVVVQEWWGVD-FEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQH 117 (158)
Q Consensus 45 ~~i~i~~~~~-~l~~~~~~p~----~~p~VIllHg~~G~~-~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~ 117 (158)
++..+++.++ .+..+.+.|. ..++||++||+.+.. ..+..++..|+ ++||+|+++|++| |.+.....
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~--~~Gy~V~~~D~rGhG~S~~~~~---- 106 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLA--QMGFACFALDLEGHGRSEGLRA---- 106 (330)
T ss_pred ccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHH--hCCCEEEEecCCCCCCCCCccc----
Confidence 4456666665 7888777652 256799999996543 35667888999 8999999999998 87642110
Q ss_pred HHcCCChhhHHHHHHHHHHHHHhC---CCCcEEEEEeccCCccC
Q 031524 118 LMSGLDWPGAVKDIHASVNWLKAN---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 118 ~~~~~~~~~~~~di~~av~~l~~~---~~~~I~viG~S~GG~lA 158 (158)
...+.+...+|+.+++++++.. +..++.|+||||||.+|
T Consensus 107 --~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia 148 (330)
T PLN02298 107 --YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAIC 148 (330)
T ss_pred --cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHH
Confidence 1125667789999999999764 24579999999999764
No 11
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.47 E-value=6.9e-13 Score=109.89 Aligned_cols=103 Identities=12% Similarity=-0.007 Sum_probs=76.9
Q ss_pred EEeeCCceEEEEEEcCC---CCCEEEEEcccCCCCh-HHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCC
Q 031524 48 QIQRDDTTFDAYVVGKE---DAPGIVVVQEWWGVDF-EIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGL 122 (158)
Q Consensus 48 ~i~~~~~~l~~~~~~p~---~~p~VIllHg~~G~~~-~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~ 122 (158)
.+++++..+..+.+.|. ..+.||++||+.+... .+..++..|+ ++||.|+++|++| |.+.... ....
T Consensus 66 ~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~--~~g~~v~~~D~~G~G~S~~~~------~~~~ 137 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIA--SSGYGVFAMDYPGFGLSEGLH------GYIP 137 (349)
T ss_pred EEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHH--hCCCEEEEecCCCCCCCCCCC------CCcC
Confidence 33434448888888773 3578999999987654 4578899999 8999999999998 7764311 0012
Q ss_pred ChhhHHHHHHHHHHHHHhC---CCCcEEEEEeccCCccC
Q 031524 123 DWPGAVKDIHASVNWLKAN---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 123 ~~~~~~~di~~av~~l~~~---~~~~I~viG~S~GG~lA 158 (158)
+++.+++|+.+.++++... +..++.|+||||||.+|
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~va 176 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVA 176 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHH
Confidence 5677889999999888654 24579999999999864
No 12
>PRK10566 esterase; Provisional
Probab=99.45 E-value=3.5e-13 Score=105.71 Aligned_cols=90 Identities=14% Similarity=0.192 Sum_probs=64.5
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCC-CCHHHH-HHHHcCCChhhHHHHHHHHHHHHHhC
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVG-LDTAEA-QHLMSGLDWPGAVKDIHASVNWLKAN 141 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~-~~~~~~-~~~~~~~~~~~~~~di~~av~~l~~~ 141 (158)
+.|.||++||+.+....+..+++.|+ ++||.|+++|++| |.+. +..... ..+.. ......+|+..+++++.++
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~--~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~ 101 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALA--QAGFRVIMPDAPMHGARFSGDEARRLNHFWQ--ILLQNMQEFPTLRAAIREE 101 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHH--hCCCEEEEecCCcccccCCCccccchhhHHH--HHHHHHHHHHHHHHHHHhc
Confidence 36899999999888777888999999 9999999999997 5431 111100 00000 0113357777888888776
Q ss_pred C---CCcEEEEEeccCCccC
Q 031524 142 G---SKKASINNLWNFNRLA 158 (158)
Q Consensus 142 ~---~~~I~viG~S~GG~lA 158 (158)
+ .++|+++|||+||.++
T Consensus 102 ~~~~~~~i~v~G~S~Gg~~a 121 (249)
T PRK10566 102 GWLLDDRLAVGGASMGGMTA 121 (249)
T ss_pred CCcCccceeEEeecccHHHH
Confidence 3 5799999999999764
No 13
>PRK10749 lysophospholipase L2; Provisional
Probab=99.43 E-value=6.3e-13 Score=109.56 Aligned_cols=112 Identities=13% Similarity=-0.000 Sum_probs=81.3
Q ss_pred ceeEEEeeCCc-eEEEEEEcC-CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHc
Q 031524 44 FKKIQIQRDDT-TFDAYVVGK-EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMS 120 (158)
Q Consensus 44 ~~~i~i~~~~~-~l~~~~~~p-~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~ 120 (158)
.++..+...++ .+..+.+.+ .+.++||++||+.+....+..++..|+ +.||.|+++|++| |.+....... ....
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~--~~g~~v~~~D~~G~G~S~~~~~~~-~~~~ 106 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLF--HLGYDVLIIDHRGQGRSGRLLDDP-HRGH 106 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHH--HCCCeEEEEcCCCCCCCCCCCCCC-CcCc
Confidence 34455555554 777777765 346799999999887777888999999 8999999999998 7664211000 0001
Q ss_pred CCChhhHHHHHHHHHHHHHhC-CCCcEEEEEeccCCccC
Q 031524 121 GLDWPGAVKDIHASVNWLKAN-GSKKASINNLWNFNRLA 158 (158)
Q Consensus 121 ~~~~~~~~~di~~av~~l~~~-~~~~I~viG~S~GG~lA 158 (158)
..+++.+++|+..+++.+... +..++.++||||||.+|
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia 145 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAIL 145 (330)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHH
Confidence 126778889999999887544 45789999999999864
No 14
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.42 E-value=1.4e-12 Score=110.81 Aligned_cols=106 Identities=8% Similarity=-0.066 Sum_probs=80.5
Q ss_pred eeEEEeeCCc-eEEEEEEcCC---CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHH
Q 031524 45 KKIQIQRDDT-TFDAYVVGKE---DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLM 119 (158)
Q Consensus 45 ~~i~i~~~~~-~l~~~~~~p~---~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~ 119 (158)
.+..++.+++ .+..+.+.|. ..+.||++||+.+....+..++..|+ ++||.|+++|++| |.+.....
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~--~~Gy~V~~~D~rGhG~S~~~~~------ 182 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLT--SCGFGVYAMDWIGHGGSDGLHG------ 182 (395)
T ss_pred EEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHH--HCCCEEEEeCCCCCCCCCCCCC------
Confidence 4445555554 7887787762 35789999999887777888999999 8999999999998 76643210
Q ss_pred cCCChhhHHHHHHHHHHHHHhC-CCCcEEEEEeccCCccC
Q 031524 120 SGLDWPGAVKDIHASVNWLKAN-GSKKASINNLWNFNRLA 158 (158)
Q Consensus 120 ~~~~~~~~~~di~~av~~l~~~-~~~~I~viG~S~GG~lA 158 (158)
...+++...+|+..+++++... +..++.++||||||.++
T Consensus 183 ~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ia 222 (395)
T PLN02652 183 YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVV 222 (395)
T ss_pred CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHH
Confidence 1125566789999999999765 34589999999999764
No 15
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.37 E-value=5.2e-12 Score=102.22 Aligned_cols=104 Identities=12% Similarity=0.151 Sum_probs=72.9
Q ss_pred eeEEEeeCCc-eEEEEEEcC--CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHc
Q 031524 45 KKIQIQRDDT-TFDAYVVGK--EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMS 120 (158)
Q Consensus 45 ~~i~i~~~~~-~l~~~~~~p--~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~ 120 (158)
+.+++...++ ...-++... +..|.||++||+.+....+..++..|+ +.||+|+++|++| |.+..... ..
T Consensus 22 ~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~--~~gy~vi~~Dl~G~G~S~~~~~-----~~ 94 (302)
T PRK00870 22 HYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILA--AAGHRVIAPDLIGFGRSDKPTR-----RE 94 (302)
T ss_pred eeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHH--hCCCEEEEECCCCCCCCCCCCC-----cc
Confidence 5566665333 344333322 236899999999888888889999998 8899999999998 76632110 01
Q ss_pred CCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 121 GLDWPGAVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 121 ~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
.++.+..++|+.+.++.+ +.+++.++||||||.+|
T Consensus 95 ~~~~~~~a~~l~~~l~~l---~~~~v~lvGhS~Gg~ia 129 (302)
T PRK00870 95 DYTYARHVEWMRSWFEQL---DLTDVTLVCQDWGGLIG 129 (302)
T ss_pred cCCHHHHHHHHHHHHHHc---CCCCEEEEEEChHHHHH
Confidence 235566677777766655 34689999999999764
No 16
>PRK10985 putative hydrolase; Provisional
Probab=99.35 E-value=5.8e-12 Score=103.67 Aligned_cols=102 Identities=11% Similarity=0.106 Sum_probs=70.6
Q ss_pred EEEeeCCc-eEEE-EEEcC---CCCCEEEEEcccCCCC--hHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHH
Q 031524 47 IQIQRDDT-TFDA-YVVGK---EDAPGIVVVQEWWGVD--FEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHL 118 (158)
Q Consensus 47 i~i~~~~~-~l~~-~~~~p---~~~p~VIllHg~~G~~--~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~ 118 (158)
-.++.+|+ .+.. |...| .+.|.||++||+.|.. .++..++..|+ ++||+|+++|+|| |.++.....
T Consensus 34 ~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~--~~G~~v~~~d~rG~g~~~~~~~~---- 107 (324)
T PRK10985 34 QRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQ--KRGWLGVVMHFRGCSGEPNRLHR---- 107 (324)
T ss_pred eEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHH--HCCCEEEEEeCCCCCCCccCCcc----
Confidence 34566665 4432 32222 2468999999998763 35677899999 9999999999998 544321110
Q ss_pred HcCCChhhHHHHHHHHHHHHHhC-CCCcEEEEEeccCCcc
Q 031524 119 MSGLDWPGAVKDIHASVNWLKAN-GSKKASINNLWNFNRL 157 (158)
Q Consensus 119 ~~~~~~~~~~~di~~av~~l~~~-~~~~I~viG~S~GG~l 157 (158)
.......+|+..++++++++ +..++.++||||||.+
T Consensus 108 ---~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i 144 (324)
T PRK10985 108 ---IYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNM 144 (324)
T ss_pred ---eECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHH
Confidence 11112368899999999875 4678999999999974
No 17
>PLN02511 hydrolase
Probab=99.35 E-value=1.1e-11 Score=104.74 Aligned_cols=106 Identities=11% Similarity=0.165 Sum_probs=73.7
Q ss_pred ceeEEEeeCCc-eEEE-EEEc-----CCCCCEEEEEcccCCCCh--HHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHH
Q 031524 44 FKKIQIQRDDT-TFDA-YVVG-----KEDAPGIVVVQEWWGVDF--EIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTA 113 (158)
Q Consensus 44 ~~~i~i~~~~~-~l~~-~~~~-----p~~~p~VIllHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~ 113 (158)
.+...++++|| .+.. |+.. +...|.||++||+.|... ++..++..+. +.||+|+++|++| |.+....
T Consensus 71 ~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~--~~g~~vv~~d~rG~G~s~~~~- 147 (388)
T PLN02511 71 YRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRAR--SKGWRVVVFNSRGCADSPVTT- 147 (388)
T ss_pred eeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH--HCCCEEEEEecCCCCCCCCCC-
Confidence 34456667665 5543 3321 234689999999987643 4566788887 8999999999998 7653211
Q ss_pred HHHHHHcCCChhhHHHHHHHHHHHHHhC-CCCcEEEEEeccCCccC
Q 031524 114 EAQHLMSGLDWPGAVKDIHASVNWLKAN-GSKKASINNLWNFNRLA 158 (158)
Q Consensus 114 ~~~~~~~~~~~~~~~~di~~av~~l~~~-~~~~I~viG~S~GG~lA 158 (158)
.........+|+..++++++.+ +..++.++||||||.++
T Consensus 148 ------~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~ 187 (388)
T PLN02511 148 ------PQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANIL 187 (388)
T ss_pred ------cCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHH
Confidence 1111234568999999999875 34689999999999763
No 18
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.30 E-value=8.9e-12 Score=111.18 Aligned_cols=114 Identities=15% Similarity=0.207 Sum_probs=83.7
Q ss_pred ccCCCCceeEEEeeCCc-eEEEEEEcCC------CCCEEEEEcccCCC--ChHHHHHHHHHhhcCCCcEEEeeecCC--C
Q 031524 38 DSAASPFKKIQIQRDDT-TFDAYVVGKE------DAPGIVVVQEWWGV--DFEIKNHAVKISQLNPGFKALIPDLYR--G 106 (158)
Q Consensus 38 ~~~~~~~~~i~i~~~~~-~l~~~~~~p~------~~p~VIllHg~~G~--~~~~~~~A~~La~l~~Gy~V~~~D~~g--G 106 (158)
+....+.+.+++++.|| ++++|+..|. +.|+||++||.... ...+....+.|+ .+||.|+.||+|| |
T Consensus 359 ~~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~--~~G~~V~~~n~RGS~G 436 (620)
T COG1506 359 KVKLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLA--SAGYAVLAPNYRGSTG 436 (620)
T ss_pred ccccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHh--cCCeEEEEeCCCCCCc
Confidence 34567789999999887 9999999982 24899999986322 234566788899 9999999999998 3
Q ss_pred CCCCCHHHHHHHHcCCChh-hHHHHHHHHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 107 KVGLDTAEAQHLMSGLDWP-GAVKDIHASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~-~~~~di~~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
+.. +. ...... ++. ...+|+.++++++.+++ .+||+|+|||.||.++
T Consensus 437 yG~-~F--~~~~~~--~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymt 487 (620)
T COG1506 437 YGR-EF--ADAIRG--DWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMT 487 (620)
T ss_pred cHH-HH--HHhhhh--ccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHH
Confidence 321 11 111111 221 24689999999998875 5799999999999864
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.30 E-value=1.2e-11 Score=95.24 Aligned_cols=82 Identities=13% Similarity=0.078 Sum_probs=63.3
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCC
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGS 143 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~ 143 (158)
+.|.||++||+.+....+...+..|. .||.|+++|++| |.+..... ...+.+..++|+.+.++++. .
T Consensus 12 ~~~~iv~lhG~~~~~~~~~~~~~~l~---~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~~~~~i~~~~---~ 79 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWAPQLDVLT---QRFHVVTYDHRGTGRSPGELP------PGYSIAHMADDVLQLLDALN---I 79 (257)
T ss_pred CCCEEEEEcCCCcchhHHHHHHHHHH---hccEEEEEcCCCCCCCCCCCc------ccCCHHHHHHHHHHHHHHhC---C
Confidence 46899999999998888888887776 579999999998 76643211 22466677788887777663 4
Q ss_pred CcEEEEEeccCCccC
Q 031524 144 KKASINNLWNFNRLA 158 (158)
Q Consensus 144 ~~I~viG~S~GG~lA 158 (158)
+++.++||||||.+|
T Consensus 80 ~~~~l~G~S~Gg~~a 94 (257)
T TIGR03611 80 ERFHFVGHALGGLIG 94 (257)
T ss_pred CcEEEEEechhHHHH
Confidence 689999999999764
No 20
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.28 E-value=2.8e-11 Score=96.64 Aligned_cols=97 Identities=11% Similarity=0.053 Sum_probs=71.5
Q ss_pred EeeCCceEEEEEEcCC-CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhh
Q 031524 49 IQRDDTTFDAYVVGKE-DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPG 126 (158)
Q Consensus 49 i~~~~~~l~~~~~~p~-~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~ 126 (158)
++.++.++..+....+ ..+.||++||+.+....+..+...|+ + +|+|+++|++| |.+.... ...+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~--~-~~~vi~~Dl~G~G~S~~~~-------~~~~~~~ 76 (276)
T TIGR02240 7 IDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALD--P-DLEVIAFDVPGVGGSSTPR-------HPYRFPG 76 (276)
T ss_pred eccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhc--c-CceEEEECCCCCCCCCCCC-------CcCcHHH
Confidence 3445556655554322 34789999999888888888888887 4 79999999998 7764211 1235677
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 127 AVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 127 ~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
..+|+.+.++.+. .+++.++||||||.+|
T Consensus 77 ~~~~~~~~i~~l~---~~~~~LvG~S~GG~va 105 (276)
T TIGR02240 77 LAKLAARMLDYLD---YGQVNAIGVSWGGALA 105 (276)
T ss_pred HHHHHHHHHHHhC---cCceEEEEECHHHHHH
Confidence 7888888888873 3689999999999864
No 21
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.28 E-value=7.4e-11 Score=95.58 Aligned_cols=112 Identities=15% Similarity=0.159 Sum_probs=85.1
Q ss_pred CCCCceeEEEeeCCceEEEEEEcC--CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHH
Q 031524 40 AASPFKKIQIQRDDTTFDAYVVGK--EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQ 116 (158)
Q Consensus 40 ~~~~~~~i~i~~~~~~l~~~~~~p--~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~ 116 (158)
.....+.+.++..+.++..|+..| ...|.++++||.....-.+..+|..|.. +.-.+|+++|+|| |.+-.+.+.
T Consensus 46 yFdekedv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s-~~~~r~~a~DlRgHGeTk~~~e~-- 122 (343)
T KOG2564|consen 46 YFDEKEDVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKS-KIRCRCLALDLRGHGETKVENED-- 122 (343)
T ss_pred hhccccccccCCCcceEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHh-hcceeEEEeeccccCccccCChh--
Confidence 345567788888777999999987 3478999999976666667778887764 4567889999998 765433222
Q ss_pred HHHcCCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 117 HLMSGLDWPGAVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 117 ~~~~~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
.++.+...+|+.+.++++-.....+|.+|||||||.+|
T Consensus 123 ----dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIa 160 (343)
T KOG2564|consen 123 ----DLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIA 160 (343)
T ss_pred ----hcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhh
Confidence 24677888999999988854436789999999999875
No 22
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.28 E-value=2.2e-11 Score=98.01 Aligned_cols=88 Identities=10% Similarity=0.026 Sum_probs=65.3
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCC
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGS 143 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~ 143 (158)
+.|.||++||+.+....+..++..|+ +. |+|+++|++| |.+.............++.+...+|+.+.++.+. .
T Consensus 28 ~~~~vlllHG~~~~~~~w~~~~~~L~--~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~---~ 101 (294)
T PLN02824 28 SGPALVLVHGFGGNADHWRKNTPVLA--KS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVV---G 101 (294)
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHH--hC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhc---C
Confidence 35899999999998888999999998 65 6999999999 7764211000000113467777888888887663 4
Q ss_pred CcEEEEEeccCCccC
Q 031524 144 KKASINNLWNFNRLA 158 (158)
Q Consensus 144 ~~I~viG~S~GG~lA 158 (158)
+++.++||||||.++
T Consensus 102 ~~~~lvGhS~Gg~va 116 (294)
T PLN02824 102 DPAFVICNSVGGVVG 116 (294)
T ss_pred CCeEEEEeCHHHHHH
Confidence 789999999999864
No 23
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.28 E-value=2.8e-11 Score=95.09 Aligned_cols=92 Identities=12% Similarity=0.117 Sum_probs=66.7
Q ss_pred eEEEEEEcCCCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHH
Q 031524 55 TFDAYVVGKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHA 133 (158)
Q Consensus 55 ~l~~~~~~p~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~ 133 (158)
.+......+.+.|.||++||+.+....+..+...|+ + +|.|+++|++| |.+..... ...+++..++|+.+
T Consensus 17 ~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~--~-~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~ 87 (278)
T TIGR03056 17 HWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLA--R-SFRVVAPDLPGHGFTRAPFR------FRFTLPSMAEDLSA 87 (278)
T ss_pred EEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHh--h-CcEEEeecCCCCCCCCCccc------cCCCHHHHHHHHHH
Confidence 443333333346899999999988888888888887 4 79999999998 76532111 12466677788887
Q ss_pred HHHHHHhCCCCcEEEEEeccCCccC
Q 031524 134 SVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 134 av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
+++.+. .+++.++||||||.++
T Consensus 88 ~i~~~~---~~~~~lvG~S~Gg~~a 109 (278)
T TIGR03056 88 LCAAEG---LSPDGVIGHSAGAAIA 109 (278)
T ss_pred HHHHcC---CCCceEEEECccHHHH
Confidence 776542 4678999999999864
No 24
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.27 E-value=5.6e-12 Score=105.95 Aligned_cols=120 Identities=14% Similarity=0.208 Sum_probs=73.5
Q ss_pred ccccCCCCceeEEEeeCC-ceEEEEEEcCC----CCCEEEEEcccCCCChH------------------HHHHHHHHhhc
Q 031524 36 MADSAASPFKKIQIQRDD-TTFDAYVVGKE----DAPGIVVVQEWWGVDFE------------------IKNHAVKISQL 92 (158)
Q Consensus 36 ~~~~~~~~~~~i~i~~~~-~~l~~~~~~p~----~~p~VIllHg~~G~~~~------------------~~~~A~~La~l 92 (158)
..+......+.++|.+.. ..+++|+..|+ +.|+||++||..+..+. ...++..|+
T Consensus 80 ~eqrdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LA-- 157 (390)
T PF12715_consen 80 TEQRDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLA-- 157 (390)
T ss_dssp EEEETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHH--
T ss_pred EEecCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHH--
Confidence 446667888999998865 49999999884 46899999987554322 135799999
Q ss_pred CCCcEEEeeecCC-CCCCC----------CHHHH-HHHH-cCCChhh-HHHHHHHHHHHHHhCC---CCcEEEEEeccCC
Q 031524 93 NPGFKALIPDLYR-GKVGL----------DTAEA-QHLM-SGLDWPG-AVKDIHASVNWLKANG---SKKASINNLWNFN 155 (158)
Q Consensus 93 ~~Gy~V~~~D~~g-G~~~~----------~~~~~-~~~~-~~~~~~~-~~~di~~av~~l~~~~---~~~I~viG~S~GG 155 (158)
++||.|+++|..+ |.... +.+.. ..++ -..++.. ..-|...+++||.+++ ++||+++||||||
T Consensus 158 k~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg 237 (390)
T PF12715_consen 158 KRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGG 237 (390)
T ss_dssp TTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGH
T ss_pred hCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccH
Confidence 9999999999997 53211 11121 1221 1223332 3344455899999986 7899999999998
Q ss_pred cc
Q 031524 156 RL 157 (158)
Q Consensus 156 ~l 157 (158)
..
T Consensus 238 ~~ 239 (390)
T PF12715_consen 238 YR 239 (390)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 25
>PLN02872 triacylglycerol lipase
Probab=99.27 E-value=1.2e-11 Score=105.10 Aligned_cols=119 Identities=10% Similarity=0.106 Sum_probs=84.4
Q ss_pred cccccCCCCceeEEEeeCCc-eEEEEEEcC-------CCCCEEEEEcccCCCChH------HHHHHHHHhhcCCCcEEEe
Q 031524 35 SMADSAASPFKKIQIQRDDT-TFDAYVVGK-------EDAPGIVVVQEWWGVDFE------IKNHAVKISQLNPGFKALI 100 (158)
Q Consensus 35 ~~~~~~~~~~~~i~i~~~~~-~l~~~~~~p-------~~~p~VIllHg~~G~~~~------~~~~A~~La~l~~Gy~V~~ 100 (158)
.+......+.|+-.++++|| .|..+...+ .+.|.|+++||+.+.... ...++..|+ ++||+|++
T Consensus 35 ~~i~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La--~~GydV~l 112 (395)
T PLN02872 35 QLIHPAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILA--DHGFDVWV 112 (395)
T ss_pred HHHHHcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHH--hCCCCccc
Confidence 34555688899999999988 666555432 125789999998655433 246788899 99999999
Q ss_pred eecCC-CCCCC----CHHHHHHHHcCCChhhHH-HHHHHHHHHHHhCCCCcEEEEEeccCCcc
Q 031524 101 PDLYR-GKVGL----DTAEAQHLMSGLDWPGAV-KDIHASVNWLKANGSKKASINNLWNFNRL 157 (158)
Q Consensus 101 ~D~~g-G~~~~----~~~~~~~~~~~~~~~~~~-~di~~av~~l~~~~~~~I~viG~S~GG~l 157 (158)
+|+|| +.+.+ +.... .....+|++.. .|+.++++++.+...+++.++|||+||.+
T Consensus 113 ~n~RG~~~s~gh~~~~~~~~--~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~ 173 (395)
T PLN02872 113 GNVRGTRWSYGHVTLSEKDK--EFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIM 173 (395)
T ss_pred ccccccccccCCCCCCccch--hccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHH
Confidence 99998 43211 11110 11234666655 89999999997654579999999999975
No 26
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.26 E-value=1.3e-11 Score=108.65 Aligned_cols=98 Identities=13% Similarity=0.076 Sum_probs=74.1
Q ss_pred eeCCc-eEEEEEEcCC---CCCEEEEEcccCCCCh----HHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHc
Q 031524 50 QRDDT-TFDAYVVGKE---DAPGIVVVQEWWGVDF----EIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMS 120 (158)
Q Consensus 50 ~~~~~-~l~~~~~~p~---~~p~VIllHg~~G~~~----~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~ 120 (158)
+..|+ .|.++++.|. +.|+||++|++..... .....+..|+ ++||.|+++|+|| |.+.+.. .
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~--~~Gy~vv~~D~RG~g~S~g~~-------~ 72 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFV--AQGYAVVIQDTRGRGASEGEF-------D 72 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHH--hCCcEEEEEeccccccCCCce-------E
Confidence 44555 8999888873 5799999999876432 2234567888 9999999999998 7665421 1
Q ss_pred CCChhhHHHHHHHHHHHHHhCC--CCcEEEEEeccCCcc
Q 031524 121 GLDWPGAVKDIHASVNWLKANG--SKKASINNLWNFNRL 157 (158)
Q Consensus 121 ~~~~~~~~~di~~av~~l~~~~--~~~I~viG~S~GG~l 157 (158)
..+ ....+|+.++++|+++++ .++|+++|+|+||.+
T Consensus 73 ~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~ 110 (550)
T TIGR00976 73 LLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVT 110 (550)
T ss_pred ecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHH
Confidence 112 356789999999998874 579999999999975
No 27
>PRK05855 short chain dehydrogenase; Validated
Probab=99.25 E-value=3.7e-11 Score=104.26 Aligned_cols=102 Identities=13% Similarity=0.139 Sum_probs=75.2
Q ss_pred eEEEeeCCceEEEEEEcCCCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCCh
Q 031524 46 KIQIQRDDTTFDAYVVGKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDW 124 (158)
Q Consensus 46 ~i~i~~~~~~l~~~~~~p~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~ 124 (158)
.+.++.++..+..+.+.+.+.|.||++||+.+....+..+...|+ .||.|+++|++| |.+..... ...++.
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~---~~~~Vi~~D~~G~G~S~~~~~-----~~~~~~ 76 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLA---DRFRVVAYDVRGAGRSSAPKR-----TAAYTL 76 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhh---cceEEEEecCCCCCCCCCCCc-----ccccCH
Confidence 334444555777666665557899999999988888888888886 589999999998 76642110 112467
Q ss_pred hhHHHHHHHHHHHHHhCCCCcEEEEEeccCCcc
Q 031524 125 PGAVKDIHASVNWLKANGSKKASINNLWNFNRL 157 (158)
Q Consensus 125 ~~~~~di~~av~~l~~~~~~~I~viG~S~GG~l 157 (158)
+...+|+..+++.+.. .+++.++||||||.+
T Consensus 77 ~~~a~dl~~~i~~l~~--~~~~~lvGhS~Gg~~ 107 (582)
T PRK05855 77 ARLADDFAAVIDAVSP--DRPVHLLAHDWGSIQ 107 (582)
T ss_pred HHHHHHHHHHHHHhCC--CCcEEEEecChHHHH
Confidence 7788999988887642 345999999999964
No 28
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.25 E-value=7.9e-11 Score=93.41 Aligned_cols=104 Identities=10% Similarity=0.033 Sum_probs=65.6
Q ss_pred ceeEEEeeCCc-eEEEEEEcCCCCCEEEEEcccCCCChHHH---HHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHH
Q 031524 44 FKKIQIQRDDT-TFDAYVVGKEDAPGIVVVQEWWGVDFEIK---NHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHL 118 (158)
Q Consensus 44 ~~~i~i~~~~~-~l~~~~~~p~~~p~VIllHg~~G~~~~~~---~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~ 118 (158)
.+.+.++.++. ....++...+..|.||++||+.+....+. .....|+ +.||.|+++|++| |.+......
T Consensus 7 ~~~~~~~~~~~~~~~~~y~~~g~~~~ivllHG~~~~~~~~~~~~~~~~~l~--~~~~~vi~~D~~G~G~S~~~~~~---- 80 (282)
T TIGR03343 7 SKFVKINEKGLSNFRIHYNEAGNGEAVIMLHGGGPGAGGWSNYYRNIGPFV--DAGYRVILKDSPGFNKSDAVVMD---- 80 (282)
T ss_pred ceEEEcccccccceeEEEEecCCCCeEEEECCCCCchhhHHHHHHHHHHHH--hCCCEEEEECCCCCCCCCCCcCc----
Confidence 46666766553 23444434445688999999876544332 3345676 7899999999998 766432100
Q ss_pred HcCCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 119 MSGLDWPGAVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 119 ~~~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
..... ...+|+.++++.+ +.+++.++||||||.++
T Consensus 81 -~~~~~-~~~~~l~~~l~~l---~~~~~~lvG~S~Gg~ia 115 (282)
T TIGR03343 81 -EQRGL-VNARAVKGLMDAL---DIEKAHLVGNSMGGATA 115 (282)
T ss_pred -ccccc-hhHHHHHHHHHHc---CCCCeeEEEECchHHHH
Confidence 00011 2346666666555 35799999999999864
No 29
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.25 E-value=2.2e-11 Score=98.20 Aligned_cols=85 Identities=16% Similarity=0.090 Sum_probs=62.9
Q ss_pred C-CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHh
Q 031524 63 K-EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKA 140 (158)
Q Consensus 63 p-~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~ 140 (158)
| ++.|.||++||+++....+..++..|+ +.||.|+++|++| |.+...+. ...+++...+++.+.++.+.
T Consensus 14 ~~~~~p~vvliHG~~~~~~~w~~~~~~L~--~~g~~vi~~dl~g~G~s~~~~~------~~~~~~~~~~~l~~~i~~l~- 84 (273)
T PLN02211 14 PNRQPPHFVLIHGISGGSWCWYKIRCLME--NSGYKVTCIDLKSAGIDQSDAD------SVTTFDEYNKPLIDFLSSLP- 84 (273)
T ss_pred ccCCCCeEEEECCCCCCcCcHHHHHHHHH--hCCCEEEEecccCCCCCCCCcc------cCCCHHHHHHHHHHHHHhcC-
Confidence 5 457899999999988888889999998 8899999999998 65432210 11355555566655555432
Q ss_pred CCCCcEEEEEeccCCcc
Q 031524 141 NGSKKASINNLWNFNRL 157 (158)
Q Consensus 141 ~~~~~I~viG~S~GG~l 157 (158)
..+++.++||||||.+
T Consensus 85 -~~~~v~lvGhS~GG~v 100 (273)
T PLN02211 85 -ENEKVILVGHSAGGLS 100 (273)
T ss_pred -CCCCEEEEEECchHHH
Confidence 1478999999999976
No 30
>PLN02965 Probable pheophorbidase
Probab=99.25 E-value=1.8e-11 Score=96.75 Aligned_cols=81 Identities=16% Similarity=-0.003 Sum_probs=63.0
Q ss_pred EEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCCcE
Q 031524 68 GIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSKKA 146 (158)
Q Consensus 68 ~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~I 146 (158)
.||++||++.....|...+..|+ +.||.|+++|++| |.+..... ...+.+...+|+.+.++.+.. .+++
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~--~~~~~via~Dl~G~G~S~~~~~------~~~~~~~~a~dl~~~l~~l~~--~~~~ 74 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLD--AAGFKSTCVDLTGAGISLTDSN------TVSSSDQYNRPLFALLSDLPP--DHKV 74 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHh--hCCceEEEecCCcCCCCCCCcc------ccCCHHHHHHHHHHHHHhcCC--CCCE
Confidence 59999999988888888999998 7899999999999 76643211 123566677888888877531 2589
Q ss_pred EEEEeccCCccC
Q 031524 147 SINNLWNFNRLA 158 (158)
Q Consensus 147 ~viG~S~GG~lA 158 (158)
.++||||||.++
T Consensus 75 ~lvGhSmGG~ia 86 (255)
T PLN02965 75 ILVGHSIGGGSV 86 (255)
T ss_pred EEEecCcchHHH
Confidence 999999999864
No 31
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.25 E-value=2.1e-11 Score=95.21 Aligned_cols=81 Identities=16% Similarity=0.191 Sum_probs=64.9
Q ss_pred CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC
Q 031524 64 EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG 142 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~ 142 (158)
...|.||++||+.+....+..++..|+ .+|.|+++|++| |.+... ...+.+...+|+.++++++.
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~---~~~~vi~~D~~G~G~s~~~--------~~~~~~~~~~d~~~~l~~l~--- 79 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLV---NDHDIIQVDMRNHGLSPRD--------PVMNYPAMAQDLLDTLDALQ--- 79 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHh---hCCeEEEECCCCCCCCCCC--------CCCCHHHHHHHHHHHHHHcC---
Confidence 356899999999988888888888887 479999999998 765321 12467778889988888763
Q ss_pred CCcEEEEEeccCCccC
Q 031524 143 SKKASINNLWNFNRLA 158 (158)
Q Consensus 143 ~~~I~viG~S~GG~lA 158 (158)
.+++.++||||||.+|
T Consensus 80 ~~~~~lvGhS~Gg~va 95 (255)
T PRK10673 80 IEKATFIGHSMGGKAV 95 (255)
T ss_pred CCceEEEEECHHHHHH
Confidence 4679999999999864
No 32
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.24 E-value=4.9e-11 Score=90.80 Aligned_cols=81 Identities=17% Similarity=0.089 Sum_probs=62.3
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCC
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGS 143 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~ 143 (158)
+.|.||++||+.+....+..++..|. .||.|+++|++| |.+.... ...+++.+.+|+...++.+. .
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~---~~~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~i~~~~---~ 78 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT---PDFRVLRYDKRGHGLSDAPE-------GPYSIEDLADDVLALLDHLG---I 78 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh---cccEEEEecCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhC---C
Confidence 46899999998777777778888876 589999999998 7653211 12466777888887777663 4
Q ss_pred CcEEEEEeccCCccC
Q 031524 144 KKASINNLWNFNRLA 158 (158)
Q Consensus 144 ~~I~viG~S~GG~lA 158 (158)
+++.++||||||.++
T Consensus 79 ~~v~liG~S~Gg~~a 93 (251)
T TIGR02427 79 ERAVFCGLSLGGLIA 93 (251)
T ss_pred CceEEEEeCchHHHH
Confidence 689999999999763
No 33
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.24 E-value=3.1e-11 Score=99.99 Aligned_cols=102 Identities=14% Similarity=0.015 Sum_probs=73.9
Q ss_pred eCCc-eEEEEEEcCC-CCCEEEEEcccCCCCh--HH------------------------HHHHHHHhhcCCCcEEEeee
Q 031524 51 RDDT-TFDAYVVGKE-DAPGIVVVQEWWGVDF--EI------------------------KNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 51 ~~~~-~l~~~~~~p~-~~p~VIllHg~~G~~~--~~------------------------~~~A~~La~l~~Gy~V~~~D 102 (158)
+.++ .+..+.+.|. +..+|+++||+.++.. ++ ..+++.|+ ++||.|+++|
T Consensus 4 ~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~--~~G~~V~~~D 81 (332)
T TIGR01607 4 NKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFN--KNGYSVYGLD 81 (332)
T ss_pred CCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHH--HCCCcEEEec
Confidence 3444 7777777764 4568999999877653 11 35799999 9999999999
Q ss_pred cCC-CCCCCCHHHHHHHHcC-CChhhHHHHHHHHHHHHHh--------------------CC-CCcEEEEEeccCCccC
Q 031524 103 LYR-GKVGLDTAEAQHLMSG-LDWPGAVKDIHASVNWLKA--------------------NG-SKKASINNLWNFNRLA 158 (158)
Q Consensus 103 ~~g-G~~~~~~~~~~~~~~~-~~~~~~~~di~~av~~l~~--------------------~~-~~~I~viG~S~GG~lA 158 (158)
++| |.+.+.... ... .+++..++|+...++.+++ .+ ..++.++||||||.++
T Consensus 82 ~rGHG~S~~~~~~----~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~ 156 (332)
T TIGR01607 82 LQGHGESDGLQNL----RGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIA 156 (332)
T ss_pred ccccCCCcccccc----ccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHH
Confidence 998 766432110 011 2677888999999988765 22 4579999999999763
No 34
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.24 E-value=1.1e-10 Score=91.86 Aligned_cols=121 Identities=23% Similarity=0.245 Sum_probs=94.3
Q ss_pred CCCCcccccccccccCCCCceeEEEeeCC-ceEEEEEEcCC-CCCEEEEEcccCCCChHHHHHHHHH-hhcCCCcEEEee
Q 031524 25 FPAGYRFAVRSMADSAASPFKKIQIQRDD-TTFDAYVVGKE-DAPGIVVVQEWWGVDFEIKNHAVKI-SQLNPGFKALIP 101 (158)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~i~i~~~~-~~l~~~~~~p~-~~p~VIllHg~~G~~~~~~~~A~~L-a~l~~Gy~V~~~ 101 (158)
+|++-|+-+ -..+.-.-+-+.+++.+.| .++++|....+ +.|+++++|+..|+-.+....++-+ . ..+.+|+.+
T Consensus 36 ~pqgsR~~v-ptP~~~n~pye~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~--~l~mnv~iv 112 (300)
T KOG4391|consen 36 FPQGSRENV-PTPKEFNMPYERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYV--NLKMNVLIV 112 (300)
T ss_pred cccccccCC-CCccccCCCceEEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHH--HcCceEEEE
Confidence 788888776 2333334556889998877 59999998854 5899999999988877766666654 5 569999999
Q ss_pred ecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 102 DLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 102 D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
+||| |.+++.+.|. ...-|.+++++|+..++ ..+|.+.|-|+||.+|
T Consensus 113 sYRGYG~S~GspsE~----------GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAva 163 (300)
T KOG4391|consen 113 SYRGYGKSEGSPSEE----------GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVA 163 (300)
T ss_pred EeeccccCCCCcccc----------ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeE
Confidence 9999 8887655332 34567889999998884 6899999999999865
No 35
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.24 E-value=8.9e-11 Score=94.46 Aligned_cols=81 Identities=15% Similarity=0.120 Sum_probs=64.7
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCC
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGS 143 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~ 143 (158)
+.|.||++||+.+....+..++..|+ +.+ .|+++|++| |.+.... ..++.....+|+...++.+. .
T Consensus 26 ~g~~vvllHG~~~~~~~w~~~~~~L~--~~~-~via~D~~G~G~S~~~~-------~~~~~~~~a~dl~~ll~~l~---~ 92 (295)
T PRK03592 26 EGDPIVFLHGNPTSSYLWRNIIPHLA--GLG-RCLAPDLIGMGASDKPD-------IDYTFADHARYLDAWFDALG---L 92 (295)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHh--hCC-EEEEEcCCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHhC---C
Confidence 45899999999998888999999998 775 999999999 7764311 12466677888888777763 4
Q ss_pred CcEEEEEeccCCccC
Q 031524 144 KKASINNLWNFNRLA 158 (158)
Q Consensus 144 ~~I~viG~S~GG~lA 158 (158)
+++.++||||||.+|
T Consensus 93 ~~~~lvGhS~Gg~ia 107 (295)
T PRK03592 93 DDVVLVGHDWGSALG 107 (295)
T ss_pred CCeEEEEECHHHHHH
Confidence 689999999999864
No 36
>PLN00021 chlorophyllase
Probab=99.24 E-value=4.5e-11 Score=98.79 Aligned_cols=89 Identities=19% Similarity=0.257 Sum_probs=64.6
Q ss_pred ceEEEEEEcC---CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHH
Q 031524 54 TTFDAYVVGK---EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVK 129 (158)
Q Consensus 54 ~~l~~~~~~p---~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~ 129 (158)
..++.+++.| ++.|.||++||+.+....+..+++.|+ ++||.|++||+++ +... .. ...+
T Consensus 37 ~~~p~~v~~P~~~g~~PvVv~lHG~~~~~~~y~~l~~~La--s~G~~VvapD~~g~~~~~-~~-------------~~i~ 100 (313)
T PLN00021 37 PPKPLLVATPSEAGTYPVLLFLHGYLLYNSFYSQLLQHIA--SHGFIVVAPQLYTLAGPD-GT-------------DEIK 100 (313)
T ss_pred CCceEEEEeCCCCCCCCEEEEECCCCCCcccHHHHHHHHH--hCCCEEEEecCCCcCCCC-ch-------------hhHH
Confidence 3667777766 347999999999988888889999999 9999999999987 2111 00 1123
Q ss_pred HHHHHHHHHHhC-----------CCCcEEEEEeccCCccC
Q 031524 130 DIHASVNWLKAN-----------GSKKASINNLWNFNRLA 158 (158)
Q Consensus 130 di~~av~~l~~~-----------~~~~I~viG~S~GG~lA 158 (158)
|+.++++|+.+. +.++++++|||+||.+|
T Consensus 101 d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA 140 (313)
T PLN00021 101 DAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTA 140 (313)
T ss_pred HHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHH
Confidence 444555555431 24789999999999864
No 37
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.22 E-value=7.2e-11 Score=96.87 Aligned_cols=103 Identities=14% Similarity=0.053 Sum_probs=78.2
Q ss_pred EEeeCCc-eEEEEEEcCCC--CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCC-
Q 031524 48 QIQRDDT-TFDAYVVGKED--APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGL- 122 (158)
Q Consensus 48 ~i~~~~~-~l~~~~~~p~~--~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~- 122 (158)
.+.+.|+ .+.-+.+.+.. ..+||++||...+...+..++..|+ ++||.|+++|.|| |.+.. .+ ....
T Consensus 13 ~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~--~~G~~V~~~D~RGhG~S~r-~~-----rg~~~ 84 (298)
T COG2267 13 YFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLA--ARGFDVYALDLRGHGRSPR-GQ-----RGHVD 84 (298)
T ss_pred eeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHH--hCCCEEEEecCCCCCCCCC-CC-----cCCch
Confidence 3444444 66666666542 3689999998888888889999999 9999999999999 87741 00 0111
Q ss_pred ChhhHHHHHHHHHHHHHhC-CCCcEEEEEeccCCccC
Q 031524 123 DWPGAVKDIHASVNWLKAN-GSKKASINNLWNFNRLA 158 (158)
Q Consensus 123 ~~~~~~~di~~av~~l~~~-~~~~I~viG~S~GG~lA 158 (158)
++..+..|+...++.+... +..++.++||||||.++
T Consensus 85 ~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia 121 (298)
T COG2267 85 SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIA 121 (298)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHH
Confidence 4667889999999988764 46899999999999874
No 38
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.21 E-value=8.6e-11 Score=97.00 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=74.2
Q ss_pred EEeeCCc--eEEEEEEcC--CCCCEEEEEcccCCC--ChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHc
Q 031524 48 QIQRDDT--TFDAYVVGK--EDAPGIVVVQEWWGV--DFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMS 120 (158)
Q Consensus 48 ~i~~~~~--~l~~~~~~p--~~~p~VIllHg~~G~--~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~ 120 (158)
.+..+|+ ..-.|...| .+.|.||++||+.|. ..+++.+++.+. ++||.|+++|+|| +.+.. ...
T Consensus 53 ~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~--~rg~~~Vv~~~Rgcs~~~n-------~~p 123 (345)
T COG0429 53 RLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALS--RRGWLVVVFHFRGCSGEAN-------TSP 123 (345)
T ss_pred EEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHH--hcCCeEEEEecccccCCcc-------cCc
Confidence 4555544 444455445 346899999999776 357889999999 9999999999998 54421 112
Q ss_pred CCChhhHHHHHHHHHHHHHhC-CCCcEEEEEeccCCc
Q 031524 121 GLDWPGAVKDIHASVNWLKAN-GSKKASINNLWNFNR 156 (158)
Q Consensus 121 ~~~~~~~~~di~~av~~l~~~-~~~~I~viG~S~GG~ 156 (158)
.+....+.+|+...+++++++ +..++..+|+|+||.
T Consensus 124 ~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgn 160 (345)
T COG0429 124 RLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGN 160 (345)
T ss_pred ceecccchhHHHHHHHHHHHhCCCCceEEEEecccHH
Confidence 233344558999999999886 588999999999994
No 39
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.21 E-value=1.4e-10 Score=96.83 Aligned_cols=80 Identities=9% Similarity=-0.020 Sum_probs=61.9
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCC
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSK 144 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~ 144 (158)
.|.||++||+.+....|..++..|+ + +|.|+++|++| |.+....+ ..++.+.+.+++.+.++.+ ..+
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~--~-~~~via~Dl~G~G~S~~~~~------~~~~~~~~a~~l~~~l~~l---~~~ 155 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLA--K-NYTVYAIDLLGFGASDKPPG------FSYTMETWAELILDFLEEV---VQK 155 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHh--c-CCEEEEECCCCCCCCCCCCC------ccccHHHHHHHHHHHHHHh---cCC
Confidence 4899999999988888888888887 5 89999999999 77643111 1235666777777777665 346
Q ss_pred cEEEEEeccCCcc
Q 031524 145 KASINNLWNFNRL 157 (158)
Q Consensus 145 ~I~viG~S~GG~l 157 (158)
++.++||||||.+
T Consensus 156 ~~~lvGhS~Gg~i 168 (360)
T PLN02679 156 PTVLIGNSVGSLA 168 (360)
T ss_pred CeEEEEECHHHHH
Confidence 8999999999975
No 40
>PRK10162 acetyl esterase; Provisional
Probab=99.21 E-value=7.2e-11 Score=97.29 Aligned_cols=100 Identities=9% Similarity=0.021 Sum_probs=75.6
Q ss_pred ceeEEEeeCCceEEEEEEcCC--CCCEEEEEcccC---CCChHHHHHHHHHhhcC-CCcEEEeeecCCCCCCCCHHHHHH
Q 031524 44 FKKIQIQRDDTTFDAYVVGKE--DAPGIVVVQEWW---GVDFEIKNHAVKISQLN-PGFKALIPDLYRGKVGLDTAEAQH 117 (158)
Q Consensus 44 ~~~i~i~~~~~~l~~~~~~p~--~~p~VIllHg~~---G~~~~~~~~A~~La~l~-~Gy~V~~~D~~gG~~~~~~~~~~~ 117 (158)
.+++++++.++.+.+.++.|. +.|+||++||.. |.......+++.|+ + .|+.|+.+||+....
T Consensus 57 ~~~~~i~~~~g~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la--~~~g~~Vv~vdYrlape--------- 125 (318)
T PRK10162 57 TRAYMVPTPYGQVETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLA--SYSGCTVIGIDYTLSPE--------- 125 (318)
T ss_pred EEEEEEecCCCceEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHH--HHcCCEEEEecCCCCCC---------
Confidence 567888887778889998873 368999999832 44455667888898 5 599999999985211
Q ss_pred HHcCCChhhHHHHHHHHHHHHHhC------CCCcEEEEEeccCCccC
Q 031524 118 LMSGLDWPGAVKDIHASVNWLKAN------GSKKASINNLWNFNRLA 158 (158)
Q Consensus 118 ~~~~~~~~~~~~di~~av~~l~~~------~~~~I~viG~S~GG~lA 158 (158)
..++..++|+.++++|+.++ +.++|.|+|+|+||.+|
T Consensus 126 ----~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la 168 (318)
T PRK10162 126 ----ARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLA 168 (318)
T ss_pred ----CCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHH
Confidence 12334568888999998754 25799999999999874
No 41
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.20 E-value=2.4e-10 Score=93.32 Aligned_cols=106 Identities=9% Similarity=-0.010 Sum_probs=79.7
Q ss_pred eeEEEeeCCc-eEEEEEEcC----CCCCEEEEEcccCCCC-hHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHH
Q 031524 45 KKIQIQRDDT-TFDAYVVGK----EDAPGIVVVQEWWGVD-FEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQH 117 (158)
Q Consensus 45 ~~i~i~~~~~-~l~~~~~~p----~~~p~VIllHg~~G~~-~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~ 117 (158)
.+-.++...| .+.+-.|.| ++...|+++||+.+.. ..+..+|.+|+ +.||.|+++|++| |.+.+..
T Consensus 28 ~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~--~~g~~v~a~D~~GhG~SdGl~----- 100 (313)
T KOG1455|consen 28 SESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLA--KSGFAVYAIDYEGHGRSDGLH----- 100 (313)
T ss_pred eeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHH--hCCCeEEEeeccCCCcCCCCc-----
Confidence 3345555555 888877777 2345788899988775 67788999999 9999999999998 7664321
Q ss_pred HHcCCChhhHHHHHHHHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 118 LMSGLDWPGAVKDIHASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 118 ~~~~~~~~~~~~di~~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
..-.+...+++|+..-++.++.+. ..+..++|+||||.++
T Consensus 101 -~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~ 143 (313)
T KOG1455|consen 101 -AYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVA 143 (313)
T ss_pred -ccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHH
Confidence 111266678899988888877663 5679999999999864
No 42
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.19 E-value=2.1e-11 Score=91.21 Aligned_cols=79 Identities=16% Similarity=0.142 Sum_probs=59.3
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCCcEE
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSKKAS 147 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~I~ 147 (158)
||++||+.+....+..+++.|+ +||.|+++|++| |.+..... ....+++..++|+..+++.+. .+++.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~---~~~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~l~~~l~~~~---~~~~~ 69 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA---RGYRVIAFDLPGHGRSDPPPD-----YSPYSIEDYAEDLAELLDALG---IKKVI 69 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH---TTSEEEEEECTTSTTSSSHSS-----GSGGSHHHHHHHHHHHHHHTT---TSSEE
T ss_pred eEEECCCCCCHHHHHHHHHHHh---CCCEEEEEecCCccccccccc-----cCCcchhhhhhhhhhcccccc---ccccc
Confidence 7999999999988999999997 599999999998 76543110 112356666777777666654 37899
Q ss_pred EEEeccCCccC
Q 031524 148 INNLWNFNRLA 158 (158)
Q Consensus 148 viG~S~GG~lA 158 (158)
++|||+||.++
T Consensus 70 lvG~S~Gg~~a 80 (228)
T PF12697_consen 70 LVGHSMGGMIA 80 (228)
T ss_dssp EEEETHHHHHH
T ss_pred ccccccccccc
Confidence 99999999763
No 43
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.17 E-value=8.6e-11 Score=89.05 Aligned_cols=81 Identities=20% Similarity=0.270 Sum_probs=58.2
Q ss_pred CEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHH-HHHHHHHHHhCCCC
Q 031524 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKD-IHASVNWLKANGSK 144 (158)
Q Consensus 67 p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~d-i~~av~~l~~~~~~ 144 (158)
|.||++||+.+....+..++..|+ .||.|+++|++| |.+..... ....+++..++| +...++.+ +.+
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~---~~~~v~~~d~~g~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~---~~~ 70 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG---PHFRCLAIDLPGHGSSQSPDE-----IERYDFEEAAQDILATLLDQL---GIE 70 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc---ccCeEEEEcCCCCCCCCCCCc-----cChhhHHHHHHHHHHHHHHHc---CCC
Confidence 789999999999889999999886 599999999998 66532110 011245555555 44333333 357
Q ss_pred cEEEEEeccCCccC
Q 031524 145 KASINNLWNFNRLA 158 (158)
Q Consensus 145 ~I~viG~S~GG~lA 158 (158)
++.++|||+||.+|
T Consensus 71 ~~~l~G~S~Gg~ia 84 (251)
T TIGR03695 71 PFFLVGYSMGGRIA 84 (251)
T ss_pred eEEEEEeccHHHHH
Confidence 89999999999764
No 44
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.15 E-value=1.8e-10 Score=89.73 Aligned_cols=85 Identities=13% Similarity=0.019 Sum_probs=58.4
Q ss_pred CCCEEEEEcccCCCChH-HHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC
Q 031524 65 DAPGIVVVQEWWGVDFE-IKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG 142 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~-~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~ 142 (158)
+.+.||++||+.|.... +..+...+. +.||.|+++|++| |.+...... ....+.+.+.+|+.+.++.+.
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~--~~g~~vi~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~--- 94 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLK--EEGREVIMYDQLGCGYSDQPDDS----DELWTIDYFVDELEEVREKLG--- 94 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHH--hcCCEEEEEcCCCCCCCCCCCcc----cccccHHHHHHHHHHHHHHcC---
Confidence 36789999998776654 445555666 5699999999998 765321100 001355667777777666553
Q ss_pred CCcEEEEEeccCCccC
Q 031524 143 SKKASINNLWNFNRLA 158 (158)
Q Consensus 143 ~~~I~viG~S~GG~lA 158 (158)
.+++.++||||||.++
T Consensus 95 ~~~~~liG~S~Gg~ia 110 (288)
T TIGR01250 95 LDKFYLLGHSWGGMLA 110 (288)
T ss_pred CCcEEEEEeehHHHHH
Confidence 4579999999999864
No 45
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.15 E-value=2.6e-10 Score=94.04 Aligned_cols=96 Identities=15% Similarity=0.097 Sum_probs=67.0
Q ss_pred eeCCceEEEEEEcCCCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHH
Q 031524 50 QRDDTTFDAYVVGKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAV 128 (158)
Q Consensus 50 ~~~~~~l~~~~~~p~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~ 128 (158)
+..+..+..+...+++.|.||++||+.+....+..++..|. + +|+|+++|++| |.+.... ...+++...
T Consensus 115 ~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~--~-~~~v~~~d~~g~G~s~~~~-------~~~~~~~~~ 184 (371)
T PRK14875 115 RIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALA--A-GRPVIALDLPGHGASSKAV-------GAGSLDELA 184 (371)
T ss_pred eEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHh--c-CCEEEEEcCCCCCCCCCCC-------CCCCHHHHH
Confidence 33444554433344456899999999998888888888887 4 59999999998 6553211 123566666
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 129 KDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 129 ~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
+++...++.+ +.+++.++|||+||.+|
T Consensus 185 ~~~~~~~~~~---~~~~~~lvG~S~Gg~~a 211 (371)
T PRK14875 185 AAVLAFLDAL---GIERAHLVGHSMGGAVA 211 (371)
T ss_pred HHHHHHHHhc---CCccEEEEeechHHHHH
Confidence 6666555443 35689999999999764
No 46
>PRK10115 protease 2; Provisional
Probab=99.09 E-value=4e-10 Score=101.74 Aligned_cols=113 Identities=14% Similarity=0.065 Sum_probs=81.7
Q ss_pred CCCceeEEEeeCCc-eEEEEEEc-C-----CCCCEEEEEcccCCCC--hHHHHHHHHHhhcCCCcEEEeeecCCCCC-CC
Q 031524 41 ASPFKKIQIQRDDT-TFDAYVVG-K-----EDAPGIVVVQEWWGVD--FEIKNHAVKISQLNPGFKALIPDLYRGKV-GL 110 (158)
Q Consensus 41 ~~~~~~i~i~~~~~-~l~~~~~~-p-----~~~p~VIllHg~~G~~--~~~~~~A~~La~l~~Gy~V~~~D~~gG~~-~~ 110 (158)
....+.+.+++.|| .++++++. | ++.|.||++||.++.. ..+......|+ ++||.|+.+|+|||.. +.
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~--~rG~~v~~~n~RGs~g~G~ 490 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLL--DRGFVYAIVHVRGGGELGQ 490 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHH--HCCcEEEEEEcCCCCccCH
Confidence 44678889999887 99986654 3 3469999999987765 34555556788 8999999999998432 22
Q ss_pred CHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 111 DTAEAQHLMSGLDWPGAVKDIHASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
...++.... ......+|+.++++||.+++ ++||+++|.|.||.++
T Consensus 491 ~w~~~g~~~---~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~ 538 (686)
T PRK10115 491 QWYEDGKFL---KKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLM 538 (686)
T ss_pred HHHHhhhhh---cCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHH
Confidence 222221111 11235789999999998875 7899999999999863
No 47
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.08 E-value=1.9e-10 Score=88.57 Aligned_cols=104 Identities=15% Similarity=0.217 Sum_probs=77.5
Q ss_pred ceeEEEeeCCceEEEEEEcCC--CCCEEEEEccc---CCC--ChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHH
Q 031524 44 FKKIQIQRDDTTFDAYVVGKE--DAPGIVVVQEW---WGV--DFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEA 115 (158)
Q Consensus 44 ~~~i~i~~~~~~l~~~~~~p~--~~p~VIllHg~---~G~--~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~ 115 (158)
+.+|-|+.+-+.+.+....++ ..|..|++|-. .|+ +.-...+++.|. +.||.|+.||||| |.+.++.+.
T Consensus 4 ~~~v~i~Gp~G~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~--~~G~atlRfNfRgVG~S~G~fD~- 80 (210)
T COG2945 4 MPTVIINGPAGRLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALV--KRGFATLRFNFRGVGRSQGEFDN- 80 (210)
T ss_pred CCcEEecCCcccceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHH--hCCceEEeecccccccccCcccC-
Confidence 456778877788888776553 47889999842 233 456778999999 9999999999999 887654321
Q ss_pred HHHHcCCChhhHHHHHHHHHHHHHhCC-CCc-EEEEEeccCCccC
Q 031524 116 QHLMSGLDWPGAVKDIHASVNWLKANG-SKK-ASINNLWNFNRLA 158 (158)
Q Consensus 116 ~~~~~~~~~~~~~~di~~av~~l~~~~-~~~-I~viG~S~GG~lA 158 (158)
.. ...+|+.++++|++++. .-+ ..+.|||+|++++
T Consensus 81 -------Gi-GE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia 117 (210)
T COG2945 81 -------GI-GELEDAAAALDWLQARHPDSASCWLAGFSFGAYIA 117 (210)
T ss_pred -------Cc-chHHHHHHHHHHHHhhCCCchhhhhcccchHHHHH
Confidence 11 35689999999999873 233 4789999999864
No 48
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.07 E-value=1.8e-09 Score=87.31 Aligned_cols=98 Identities=13% Similarity=0.075 Sum_probs=64.8
Q ss_pred EEEeeCCceEEEEEEcCCCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChh
Q 031524 47 IQIQRDDTTFDAYVVGKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWP 125 (158)
Q Consensus 47 i~i~~~~~~l~~~~~~p~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~ 125 (158)
..++..+.++..... ++.|.||++||+......+..++..|. ++|+|+++|++| |.+..... ...+.+
T Consensus 17 ~~~~~~~~~i~y~~~--G~~~~iv~lHG~~~~~~~~~~~~~~l~---~~~~vi~~D~~G~G~S~~~~~------~~~~~~ 85 (286)
T PRK03204 17 RWFDSSRGRIHYIDE--GTGPPILLCHGNPTWSFLYRDIIVALR---DRFRCVAPDYLGFGLSERPSG------FGYQID 85 (286)
T ss_pred eEEEcCCcEEEEEEC--CCCCEEEEECCCCccHHHHHHHHHHHh---CCcEEEEECCCCCCCCCCCCc------cccCHH
Confidence 345555555442222 345899999998766666777888887 469999999998 76642110 012444
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 126 GAVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 126 ~~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
...+++...++.+ +.+++.++||||||.++
T Consensus 86 ~~~~~~~~~~~~~---~~~~~~lvG~S~Gg~va 115 (286)
T PRK03204 86 EHARVIGEFVDHL---GLDRYLSMGQDWGGPIS 115 (286)
T ss_pred HHHHHHHHHHHHh---CCCCEEEEEECccHHHH
Confidence 5556666555554 35789999999999764
No 49
>PLN02578 hydrolase
Probab=99.07 E-value=8.1e-10 Score=91.96 Aligned_cols=82 Identities=13% Similarity=0.029 Sum_probs=61.6
Q ss_pred CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC
Q 031524 64 EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG 142 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~ 142 (158)
++.|.||++||+.+....+......|+ + +|.|+++|++| |.+.... ..++...+.+|+.+.++.+.
T Consensus 84 g~g~~vvliHG~~~~~~~w~~~~~~l~--~-~~~v~~~D~~G~G~S~~~~-------~~~~~~~~a~~l~~~i~~~~--- 150 (354)
T PLN02578 84 GEGLPIVLIHGFGASAFHWRYNIPELA--K-KYKVYALDLLGFGWSDKAL-------IEYDAMVWRDQVADFVKEVV--- 150 (354)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHh--c-CCEEEEECCCCCCCCCCcc-------cccCHHHHHHHHHHHHHHhc---
Confidence 456789999999888778888888887 4 69999999998 7664321 12355566677776666653
Q ss_pred CCcEEEEEeccCCccC
Q 031524 143 SKKASINNLWNFNRLA 158 (158)
Q Consensus 143 ~~~I~viG~S~GG~lA 158 (158)
.+++.++|||+||.+|
T Consensus 151 ~~~~~lvG~S~Gg~ia 166 (354)
T PLN02578 151 KEPAVLVGNSLGGFTA 166 (354)
T ss_pred cCCeEEEEECHHHHHH
Confidence 4689999999999764
No 50
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.06 E-value=3.6e-10 Score=81.04 Aligned_cols=71 Identities=11% Similarity=0.156 Sum_probs=54.2
Q ss_pred EEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHh--CCCC
Q 031524 68 GIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKA--NGSK 144 (158)
Q Consensus 68 ~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~--~~~~ 144 (158)
.||++||+.+....+..+++.|+ ++||.|+++|+++ +.+.. ..++..+++++.+ .+.+
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~--~~G~~v~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~ 61 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALA--EQGYAVVAFDYPGHGDSDG-----------------ADAVERVLADIRAGYPDPD 61 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHH--HTTEEEEEESCTTSTTSHH-----------------SHHHHHHHHHHHHHHCTCC
T ss_pred CEEEECCCCCCHHHHHHHHHHHH--HCCCEEEEEecCCCCccch-----------------hHHHHHHHHHHHhhcCCCC
Confidence 58999999999889999999999 9999999999987 33310 1234444444312 2578
Q ss_pred cEEEEEeccCCcc
Q 031524 145 KASINNLWNFNRL 157 (158)
Q Consensus 145 ~I~viG~S~GG~l 157 (158)
+|+++|||+||.+
T Consensus 62 ~i~l~G~S~Gg~~ 74 (145)
T PF12695_consen 62 RIILIGHSMGGAI 74 (145)
T ss_dssp EEEEEEETHHHHH
T ss_pred cEEEEEEccCcHH
Confidence 9999999999975
No 51
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.05 E-value=6e-10 Score=86.47 Aligned_cols=78 Identities=12% Similarity=0.053 Sum_probs=59.0
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCC
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSK 144 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~ 144 (158)
.|.||++||+.+....+..++..|+ +|+|+++|++| |.+... . ..+.+...+|+.+.++.+ +.+
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~----~~~vi~~D~~G~G~S~~~-~-------~~~~~~~~~~l~~~l~~~---~~~ 66 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP----DYPRLYIDLPGHGGSAAI-S-------VDGFADVSRLLSQTLQSY---NIL 66 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC----CCCEEEecCCCCCCCCCc-c-------ccCHHHHHHHHHHHHHHc---CCC
Confidence 4789999999998888888887664 59999999998 766321 1 115556677777666654 357
Q ss_pred cEEEEEeccCCccC
Q 031524 145 KASINNLWNFNRLA 158 (158)
Q Consensus 145 ~I~viG~S~GG~lA 158 (158)
++.++||||||.+|
T Consensus 67 ~~~lvG~S~Gg~va 80 (242)
T PRK11126 67 PYWLVGYSLGGRIA 80 (242)
T ss_pred CeEEEEECHHHHHH
Confidence 99999999999764
No 52
>PRK06489 hypothetical protein; Provisional
Probab=99.04 E-value=4.3e-10 Score=93.73 Aligned_cols=90 Identities=17% Similarity=0.086 Sum_probs=54.0
Q ss_pred CCEEEEEcccCCCChHHH--HHHHHHh-----hcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHH-H
Q 031524 66 APGIVVVQEWWGVDFEIK--NHAVKIS-----QLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASV-N 136 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~--~~A~~La-----~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av-~ 136 (158)
.|.||++||+.+....+. .+...|. .+..+|.|+++|++| |.+....+........++++..++|+.+.+ +
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 689999999988765554 4554441 014689999999998 766321100000001234555555554433 3
Q ss_pred HHHhCCCCcEE-EEEeccCCccC
Q 031524 137 WLKANGSKKAS-INNLWNFNRLA 158 (158)
Q Consensus 137 ~l~~~~~~~I~-viG~S~GG~lA 158 (158)
.+ +-+++. |+||||||.+|
T Consensus 149 ~l---gi~~~~~lvG~SmGG~vA 168 (360)
T PRK06489 149 GL---GVKHLRLILGTSMGGMHA 168 (360)
T ss_pred hc---CCCceeEEEEECHHHHHH
Confidence 33 345664 89999999864
No 53
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.04 E-value=3.7e-10 Score=87.53 Aligned_cols=88 Identities=11% Similarity=0.085 Sum_probs=57.8
Q ss_pred CCCEEEEEcccCCCChHHH---HHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcC---CChhhHHHHHHHHHHH
Q 031524 65 DAPGIVVVQEWWGVDFEIK---NHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSG---LDWPGAVKDIHASVNW 137 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~---~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~---~~~~~~~~di~~av~~ 137 (158)
+.|.||++||..+....+. .++..+. +.||.|++||+++ +...... .+... ........|+...+++
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~--~~g~~Vv~Pd~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~ 85 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAAD--RYGFVLVAPEQTSYNSSNNCW----DWFFTHHRARGTGEVESLHQLIDA 85 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHH--hCCeEEEecCCcCccccCCCC----CCCCccccCCCCccHHHHHHHHHH
Confidence 5799999999877655443 3555555 7899999999987 3221100 00000 0111245677788888
Q ss_pred HHhC---CCCcEEEEEeccCCccC
Q 031524 138 LKAN---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 138 l~~~---~~~~I~viG~S~GG~lA 158 (158)
++++ +.++|.|+|||+||.++
T Consensus 86 ~~~~~~id~~~i~l~G~S~Gg~~a 109 (212)
T TIGR01840 86 VKANYSIDPNRVYVTGLSAGGGMT 109 (212)
T ss_pred HHHhcCcChhheEEEEECHHHHHH
Confidence 8765 25799999999999763
No 54
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.03 E-value=4.4e-10 Score=85.36 Aligned_cols=75 Identities=17% Similarity=0.079 Sum_probs=54.1
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCC
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSK 144 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~ 144 (158)
.|.||++||+.+....+..++..|+ .+|.|+++|++| |.+... ...+.+...+++. +...+
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~---~~~~vi~~d~~G~G~s~~~--------~~~~~~~~~~~~~-------~~~~~ 65 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELS---AHFTLHLVDLPGHGRSRGF--------GPLSLADAAEAIA-------AQAPD 65 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhc---cCeEEEEecCCcCccCCCC--------CCcCHHHHHHHHH-------HhCCC
Confidence 3789999999888888888998887 479999999998 765321 1123333333332 22246
Q ss_pred cEEEEEeccCCccC
Q 031524 145 KASINNLWNFNRLA 158 (158)
Q Consensus 145 ~I~viG~S~GG~lA 158 (158)
++.++||||||.++
T Consensus 66 ~~~lvG~S~Gg~~a 79 (245)
T TIGR01738 66 PAIWLGWSLGGLVA 79 (245)
T ss_pred CeEEEEEcHHHHHH
Confidence 89999999999763
No 55
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.02 E-value=2.7e-10 Score=96.90 Aligned_cols=107 Identities=14% Similarity=0.133 Sum_probs=75.9
Q ss_pred CCCCceeEEEeeCCceEEEEEEcCC---CCCEEEEEcccCCCChHHHH-HHHHHhhcCCCcEEEeeecCC-CCCCCCHHH
Q 031524 40 AASPFKKIQIQRDDTTFDAYVVGKE---DAPGIVVVQEWWGVDFEIKN-HAVKISQLNPGFKALIPDLYR-GKVGLDTAE 114 (158)
Q Consensus 40 ~~~~~~~i~i~~~~~~l~~~~~~p~---~~p~VIllHg~~G~~~~~~~-~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~ 114 (158)
...+.++++|+.+++++.+|+..|. +.|+||++-|.-+..+.+.. +.+.|+ .+|++++++|.+| |.+...+
T Consensus 161 ~~~~i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~--~rGiA~LtvDmPG~G~s~~~~-- 236 (411)
T PF06500_consen 161 SDYPIEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLA--PRGIAMLTVDMPGQGESPKWP-- 236 (411)
T ss_dssp SSSEEEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCH--HCT-EEEEE--TTSGGGTTT---
T ss_pred CCCCcEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHH--hCCCEEEEEccCCCcccccCC--
Confidence 4666899999999999999999883 46899999999998876554 456788 8999999999999 7653221
Q ss_pred HHHHHcCCChhhHHHHHHHHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 115 AQHLMSGLDWPGAVKDIHASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 115 ~~~~~~~~~~~~~~~di~~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
+ ..|.+.. ..++++||.+.+ ..||+++|+|+||++|
T Consensus 237 ---l--~~D~~~l---~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~A 275 (411)
T PF06500_consen 237 ---L--TQDSSRL---HQAVLDYLASRPWVDHTRVGAWGFSFGGYYA 275 (411)
T ss_dssp ---S---S-CCHH---HHHHHHHHHHSTTEEEEEEEEEEETHHHHHH
T ss_pred ---C--CcCHHHH---HHHHHHHHhcCCccChhheEEEEeccchHHH
Confidence 1 1122222 346789998885 6799999999999864
No 56
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.02 E-value=1.5e-09 Score=92.22 Aligned_cols=85 Identities=15% Similarity=0.058 Sum_probs=55.7
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHH-HHHHHHHHHhCC
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKD-IHASVNWLKANG 142 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~d-i~~av~~l~~~~ 142 (158)
+.|.||++||+.+....+...+..|+ + +|.|+++|++| |.+.... . ...+.+...+. +..+.+|+...+
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~--~-~~~vi~~D~rG~G~S~~~~-~-----~~~~~~~~~~~~~~~i~~~~~~l~ 174 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALA--S-RFRVIAIDQLGWGGSSRPD-F-----TCKSTEETEAWFIDSFEEWRKAKN 174 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHH--h-CCEEEEECCCCCCCCCCCC-c-----ccccHHHHHHHHHHHHHHHHHHcC
Confidence 46899999999877766767778887 5 69999999998 7653211 0 00011111111 223334555445
Q ss_pred CCcEEEEEeccCCccC
Q 031524 143 SKKASINNLWNFNRLA 158 (158)
Q Consensus 143 ~~~I~viG~S~GG~lA 158 (158)
.+++.++||||||.+|
T Consensus 175 ~~~~~lvGhS~GG~la 190 (402)
T PLN02894 175 LSNFILLGHSFGGYVA 190 (402)
T ss_pred CCCeEEEEECHHHHHH
Confidence 5789999999999874
No 57
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.00 E-value=1.9e-09 Score=87.68 Aligned_cols=100 Identities=15% Similarity=0.019 Sum_probs=61.9
Q ss_pred EEeeCCc-eEEEEEEcCCCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChh
Q 031524 48 QIQRDDT-TFDAYVVGKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWP 125 (158)
Q Consensus 48 ~i~~~~~-~l~~~~~~p~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~ 125 (158)
.+...++ .+.-....+.+.+.||++||+.+.... ..+...+. ..+|+|+++|++| |.+..... ....+..
T Consensus 8 ~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~-~~~~~~~~--~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~~ 79 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTD-PGCRRFFD--PETYRIVLFDQRGCGKSTPHAC-----LEENTTW 79 (306)
T ss_pred eEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCC-HHHHhccC--ccCCEEEEECCCCCCCCCCCCC-----cccCCHH
Confidence 3343443 444333333335789999998765433 23445565 6799999999998 76642110 0112344
Q ss_pred hHHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 126 GAVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 126 ~~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
...+|+...++.+. .+++.++||||||.++
T Consensus 80 ~~~~dl~~l~~~l~---~~~~~lvG~S~GG~ia 109 (306)
T TIGR01249 80 DLVADIEKLREKLG---IKNWLVFGGSWGSTLA 109 (306)
T ss_pred HHHHHHHHHHHHcC---CCCEEEEEECHHHHHH
Confidence 56677766666553 4689999999999764
No 58
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.00 E-value=4.6e-10 Score=93.06 Aligned_cols=115 Identities=15% Similarity=0.205 Sum_probs=74.0
Q ss_pred CCCceeEEEeeCCc-eEEEEEEcCC----CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-C-CCCC---
Q 031524 41 ASPFKKIQIQRDDT-TFDAYVVGKE----DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-G-KVGL--- 110 (158)
Q Consensus 41 ~~~~~~i~i~~~~~-~l~~~~~~p~----~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G-~~~~--- 110 (158)
.....+|++++-++ .+.||+..|. +.|+||.+||..+......... .++ .+||.|+.+|.+| | .+..
T Consensus 53 ~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~-~~a--~~G~~vl~~d~rGqg~~~~d~~~ 129 (320)
T PF05448_consen 53 GVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLL-PWA--AAGYAVLAMDVRGQGGRSPDYRG 129 (320)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHH-HHH--HTT-EEEEE--TTTSSSS-B-SS
T ss_pred CEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCccccc-ccc--cCCeEEEEecCCCCCCCCCCccc
Confidence 34456788998665 9999999984 4699999999887755544443 467 7999999999998 5 2210
Q ss_pred -CHHHHH-HHHcCC-C------hhhHHHHHHHHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 111 -DTAEAQ-HLMSGL-D------WPGAVKDIHASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 111 -~~~~~~-~~~~~~-~------~~~~~~di~~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
...... ...... + ....+.|+..+++++++++ .++|++.|.|+||.++
T Consensus 130 ~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~la 189 (320)
T PF05448_consen 130 SSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLA 189 (320)
T ss_dssp BSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHH
T ss_pred cCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHH
Confidence 000000 011111 1 2346789999999999985 6899999999999764
No 59
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.99 E-value=3.2e-09 Score=92.45 Aligned_cols=99 Identities=12% Similarity=0.045 Sum_probs=65.6
Q ss_pred eCCceEEEEEEcCCC---CCEEEEEcccCCCChHHHH-HHHHHhh-cCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCCh
Q 031524 51 RDDTTFDAYVVGKED---APGIVVVQEWWGVDFEIKN-HAVKISQ-LNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDW 124 (158)
Q Consensus 51 ~~~~~l~~~~~~p~~---~p~VIllHg~~G~~~~~~~-~A~~La~-l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~ 124 (158)
+++.++......|.. .|.||++||+.+....+.. +...|++ .+.+|.|+++|++| |.++...+ ..+++
T Consensus 183 ~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~------~~ytl 256 (481)
T PLN03087 183 SSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD------SLYTL 256 (481)
T ss_pred eCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC------CcCCH
Confidence 344567777766632 4799999999887766653 3344430 14799999999999 76642111 12356
Q ss_pred hhHHHHHH-HHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 125 PGAVKDIH-ASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 125 ~~~~~di~-~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
+...+|+. ..++.+ +.+++.++||||||.+|
T Consensus 257 ~~~a~~l~~~ll~~l---g~~k~~LVGhSmGG~iA 288 (481)
T PLN03087 257 REHLEMIERSVLERY---KVKSFHIVAHSLGCILA 288 (481)
T ss_pred HHHHHHHHHHHHHHc---CCCCEEEEEECHHHHHH
Confidence 66666663 444443 45789999999999864
No 60
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.98 E-value=1.9e-09 Score=84.77 Aligned_cols=74 Identities=15% Similarity=0.052 Sum_probs=53.7
Q ss_pred CEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCCc
Q 031524 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSKK 145 (158)
Q Consensus 67 p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~ 145 (158)
|.||++||+.+....|......|. + .|.|+++|++| |.+... ...+..+..+++. +...++
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~L~--~-~~~vi~~Dl~G~G~S~~~--------~~~~~~~~~~~l~-------~~~~~~ 75 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEELS--S-HFTLHLVDLPGFGRSRGF--------GALSLADMAEAVL-------QQAPDK 75 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHHHh--c-CCEEEEecCCCCCCCCCC--------CCCCHHHHHHHHH-------hcCCCC
Confidence 579999999888888888999997 5 59999999998 766421 1123333333332 223578
Q ss_pred EEEEEeccCCccC
Q 031524 146 ASINNLWNFNRLA 158 (158)
Q Consensus 146 I~viG~S~GG~lA 158 (158)
+.++||||||.+|
T Consensus 76 ~~lvGhS~Gg~ia 88 (256)
T PRK10349 76 AIWLGWSLGGLVA 88 (256)
T ss_pred eEEEEECHHHHHH
Confidence 9999999999864
No 61
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.97 E-value=5.4e-09 Score=88.71 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=65.8
Q ss_pred CCCEEEEEcccCCCC--hHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC
Q 031524 65 DAPGIVVVQEWWGVD--FEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN 141 (158)
Q Consensus 65 ~~p~VIllHg~~G~~--~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~ 141 (158)
..|.||++||+.|.. .+++.++.... +.||.|+++|-|| +.+.-.. .++....+-+|+.+++++++++
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~--~~G~r~VVfN~RG~~g~~LtT-------pr~f~ag~t~Dl~~~v~~i~~~ 194 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQ--RKGYRVVVFNHRGLGGSKLTT-------PRLFTAGWTEDLREVVNHIKKR 194 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHH--hCCcEEEEECCCCCCCCccCC-------CceeecCCHHHHHHHHHHHHHh
Confidence 359999999998764 57889999998 9999999999999 5542211 1122223568999999999887
Q ss_pred -CCCcEEEEEeccCCcc
Q 031524 142 -GSKKASINNLWNFNRL 157 (158)
Q Consensus 142 -~~~~I~viG~S~GG~l 157 (158)
|..++..+|+||||.+
T Consensus 195 ~P~a~l~avG~S~Gg~i 211 (409)
T KOG1838|consen 195 YPQAPLFAVGFSMGGNI 211 (409)
T ss_pred CCCCceEEEEecchHHH
Confidence 5678999999999975
No 62
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.96 E-value=5e-09 Score=86.38 Aligned_cols=87 Identities=21% Similarity=0.228 Sum_probs=70.0
Q ss_pred cCCCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHh
Q 031524 62 GKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKA 140 (158)
Q Consensus 62 ~p~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~ 140 (158)
.++..|.|+++||+...+..++..-..|+ ..||+|+++|++| |.+...+ . ...++....+.|+...++.|.
T Consensus 40 g~~~gP~illlHGfPe~wyswr~q~~~la--~~~~rviA~DlrGyG~Sd~P~-~----~~~Yt~~~l~~di~~lld~Lg- 111 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYSWRHQIPGLA--SRGYRVIAPDLRGYGFSDAPP-H----ISEYTIDELVGDIVALLDHLG- 111 (322)
T ss_pred cCCCCCEEEEEccCCccchhhhhhhhhhh--hcceEEEecCCCCCCCCCCCC-C----cceeeHHHHHHHHHHHHHHhc-
Confidence 35678999999999998888999999999 8999999999999 7653311 1 123456677888888888875
Q ss_pred CCCCcEEEEEeccCCccC
Q 031524 141 NGSKKASINNLWNFNRLA 158 (158)
Q Consensus 141 ~~~~~I~viG~S~GG~lA 158 (158)
.+|+.++||+||+.+|
T Consensus 112 --~~k~~lvgHDwGaiva 127 (322)
T KOG4178|consen 112 --LKKAFLVGHDWGAIVA 127 (322)
T ss_pred --cceeEEEeccchhHHH
Confidence 5799999999999764
No 63
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.95 E-value=9.5e-10 Score=88.84 Aligned_cols=115 Identities=16% Similarity=0.201 Sum_probs=80.7
Q ss_pred CCCceeEEEeeCCc-eEEEEEEcC----CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCC-C--CC
Q 031524 41 ASPFKKIQIQRDDT-TFDAYVVGK----EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKV-G--LD 111 (158)
Q Consensus 41 ~~~~~~i~i~~~~~-~l~~~~~~p----~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~-~--~~ 111 (158)
..+.-++++++-++ ++.+|+..| ++.|+||..||..|....+..+- .++ ..||.|+.+|.|| |.+ . .+
T Consensus 53 ~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l-~wa--~~Gyavf~MdvRGQg~~~~dt~~ 129 (321)
T COG3458 53 RVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDML-HWA--VAGYAVFVMDVRGQGSSSQDTAD 129 (321)
T ss_pred ceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccc-ccc--ccceeEEEEecccCCCccccCCC
Confidence 44456788888765 999999998 35799999999988775443332 345 6899999999998 433 1 11
Q ss_pred HHH---HHHHHcC--CC------hhhHHHHHHHHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 112 TAE---AQHLMSG--LD------WPGAVKDIHASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 112 ~~~---~~~~~~~--~~------~~~~~~di~~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
+.. ...+|.+ .| ......|+..+++-+.+.+ .+||++.|.|.||.++
T Consensus 130 ~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGgla 190 (321)
T COG3458 130 PPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLA 190 (321)
T ss_pred CCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhh
Confidence 111 1112211 12 2357788888999888874 7999999999999875
No 64
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.94 E-value=6e-09 Score=88.34 Aligned_cols=86 Identities=14% Similarity=0.160 Sum_probs=64.7
Q ss_pred CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC
Q 031524 64 EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG 142 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~ 142 (158)
...|.||++||+.+....+..++..|+ + +|+|+++|++| |.+...... ....++.+.+.+|+.+.++.+.
T Consensus 125 ~~~~~ivllHG~~~~~~~w~~~~~~L~--~-~~~Via~DlpG~G~S~~p~~~---~~~~ys~~~~a~~l~~~i~~l~--- 195 (383)
T PLN03084 125 NNNPPVLLIHGFPSQAYSYRKVLPVLS--K-NYHAIAFDWLGFGFSDKPQPG---YGFNYTLDEYVSSLESLIDELK--- 195 (383)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHh--c-CCEEEEECCCCCCCCCCCccc---ccccCCHHHHHHHHHHHHHHhC---
Confidence 346899999999888888888898887 5 89999999998 766432100 0012466778888888887764
Q ss_pred CCcEEEEEeccCCccC
Q 031524 143 SKKASINNLWNFNRLA 158 (158)
Q Consensus 143 ~~~I~viG~S~GG~lA 158 (158)
.+++.++|||+||.++
T Consensus 196 ~~~~~LvG~s~GG~ia 211 (383)
T PLN03084 196 SDKVSLVVQGYFSPPV 211 (383)
T ss_pred CCCceEEEECHHHHHH
Confidence 3689999999999653
No 65
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.93 E-value=1.6e-09 Score=98.57 Aligned_cols=90 Identities=16% Similarity=0.050 Sum_probs=68.3
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCC---------HHHHHHHHc-------CCChhhHH
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLD---------TAEAQHLMS-------GLDWPGAV 128 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~---------~~~~~~~~~-------~~~~~~~~ 128 (158)
.|.||++||+.+....+..++..|+ ++||.|+++|++| |.+..+ ......+++ +-++.+.+
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La--~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v 526 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLA--AAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSI 526 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHH--hCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHH
Confidence 5799999999999999999999999 8999999999997 665221 111011111 23678889
Q ss_pred HHHHHHHHHHH------h-------CCCCcEEEEEeccCCcc
Q 031524 129 KDIHASVNWLK------A-------NGSKKASINNLWNFNRL 157 (158)
Q Consensus 129 ~di~~av~~l~------~-------~~~~~I~viG~S~GG~l 157 (158)
.|+......++ + .+..+|.++||||||.+
T Consensus 527 ~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgii 568 (792)
T TIGR03502 527 LDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIV 568 (792)
T ss_pred HHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHH
Confidence 99998888887 2 12468999999999975
No 66
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.93 E-value=3.9e-09 Score=85.60 Aligned_cols=87 Identities=11% Similarity=0.108 Sum_probs=59.5
Q ss_pred CCCEEEEEcccCCCC-hH-HHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC-
Q 031524 65 DAPGIVVVQEWWGVD-FE-IKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN- 141 (158)
Q Consensus 65 ~~p~VIllHg~~G~~-~~-~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~- 141 (158)
..|.+|++|||.+.. .. ...+++.|.+ +.+|+|+++|+.++.. .....+ ..+.+.+.+++...++++.+.
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~-~~~~nVi~vD~~~~~~-~~y~~a-----~~~~~~v~~~la~~l~~L~~~~ 107 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLS-RGDYNVIVVDWGRGAN-PNYPQA-----VNNTRVVGAELAKFLDFLVDNT 107 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHh-cCCCEEEEEECccccc-cChHHH-----HHhHHHHHHHHHHHHHHHHHhc
Confidence 468999999998875 33 3456664431 5689999999987522 122111 113445567788888888664
Q ss_pred --CCCcEEEEEeccCCccC
Q 031524 142 --GSKKASINNLWNFNRLA 158 (158)
Q Consensus 142 --~~~~I~viG~S~GG~lA 158 (158)
+.++|.+|||||||.+|
T Consensus 108 g~~~~~i~lIGhSlGa~vA 126 (275)
T cd00707 108 GLSLENVHLIGHSLGAHVA 126 (275)
T ss_pred CCChHHEEEEEecHHHHHH
Confidence 35789999999999864
No 67
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.92 E-value=7.9e-09 Score=83.27 Aligned_cols=106 Identities=15% Similarity=0.174 Sum_probs=76.3
Q ss_pred ccCCCCceeEEEeeC-----CceEEEEEEcC---CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCCC
Q 031524 38 DSAASPFKKIQIQRD-----DTTFDAYVVGK---EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVG 109 (158)
Q Consensus 38 ~~~~~~~~~i~i~~~-----~~~l~~~~~~p---~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~ 109 (158)
+++....+.+.+++. .-..+..++.| +..|+|+++|||.-.+..+.++-+.++ .+||.|++|+++.....
T Consensus 10 ~~G~~~~~~~~Vd~s~~~~~spPkpLlI~tP~~~G~yPVilF~HG~~l~ns~Ys~lL~HIA--SHGfIVVAPQl~~~~~p 87 (307)
T PF07224_consen 10 ETGKYKTKLFNVDTSSNSSPSPPKPLLIVTPSEAGTYPVILFLHGFNLYNSFYSQLLAHIA--SHGFIVVAPQLYTLFPP 87 (307)
T ss_pred ecCCceeEEEeecCCCCCCCCCCCCeEEecCCcCCCccEEEEeechhhhhHHHHHHHHHHh--hcCeEEEechhhcccCC
Confidence 334444555555321 12555666666 458999999999988889999999999 99999999999874333
Q ss_pred CCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC-----C------CCcEEEEEeccCCccC
Q 031524 110 LDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN-----G------SKKASINNLWNFNRLA 158 (158)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~-----~------~~~I~viG~S~GG~lA 158 (158)
... ..+++..++++|+.+. + -.+++++|||.||..|
T Consensus 88 ~~~-------------~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktA 134 (307)
T PF07224_consen 88 DGQ-------------DEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTA 134 (307)
T ss_pred Cch-------------HHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHH
Confidence 222 2346777888888653 1 4689999999999754
No 68
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.90 E-value=5.2e-09 Score=86.92 Aligned_cols=81 Identities=9% Similarity=0.071 Sum_probs=58.5
Q ss_pred CCEEEEEcccCCCChH-----HHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHH-HHHHHHHHHH
Q 031524 66 APGIVVVQEWWGVDFE-----IKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAV-KDIHASVNWL 138 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~-----~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~-~di~~av~~l 138 (158)
.+.||++|++...... .+.+++.|+ ++||+|+++|+++ |.+. ...+.+.+. +|+.++++++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~--~~G~~V~~~D~~g~g~s~----------~~~~~~d~~~~~~~~~v~~l 129 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLL--ERGQDVYLIDWGYPDRAD----------RYLTLDDYINGYIDKCVDYI 129 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHH--HCCCeEEEEeCCCCCHHH----------hcCCHHHHHHHHHHHHHHHH
Confidence 3469999987432221 257999999 9999999999976 3221 122445554 4588899998
Q ss_pred HhC-CCCcEEEEEeccCCccC
Q 031524 139 KAN-GSKKASINNLWNFNRLA 158 (158)
Q Consensus 139 ~~~-~~~~I~viG~S~GG~lA 158 (158)
+++ +.++|.++||||||.++
T Consensus 130 ~~~~~~~~i~lvGhS~GG~i~ 150 (350)
T TIGR01836 130 CRTSKLDQISLLGICQGGTFS 150 (350)
T ss_pred HHHhCCCcccEEEECHHHHHH
Confidence 776 46799999999999763
No 69
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.85 E-value=1.5e-08 Score=67.73 Aligned_cols=73 Identities=14% Similarity=0.071 Sum_probs=57.4
Q ss_pred eEEEEEEcCCC--CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHH
Q 031524 55 TFDAYVVGKED--APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDI 131 (158)
Q Consensus 55 ~l~~~~~~p~~--~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di 131 (158)
+|....+.|.+ +.+|+++||.......+..+|+.|+ ++||.|+++|++| |.+.+.. ...-+++..++|+
T Consensus 3 ~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~--~~G~~V~~~D~rGhG~S~g~r------g~~~~~~~~v~D~ 74 (79)
T PF12146_consen 3 KLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLA--EQGYAVFAYDHRGHGRSEGKR------GHIDSFDDYVDDL 74 (79)
T ss_pred EEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHH--hCCCEEEEECCCcCCCCCCcc------cccCCHHHHHHHH
Confidence 56777787743 5788899999888788899999999 9999999999999 8876421 1122677888998
Q ss_pred HHHH
Q 031524 132 HASV 135 (158)
Q Consensus 132 ~~av 135 (158)
...+
T Consensus 75 ~~~~ 78 (79)
T PF12146_consen 75 HQFI 78 (79)
T ss_pred HHHh
Confidence 7765
No 70
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.82 E-value=2.3e-08 Score=80.64 Aligned_cols=79 Identities=18% Similarity=0.319 Sum_probs=58.6
Q ss_pred CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC-
Q 031524 64 EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN- 141 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~- 141 (158)
+..|+||++||+.-.+..+..+.+++| .+||.|+.+|++. .... +. ...+++.+.++|+.+.
T Consensus 15 g~yPVv~f~~G~~~~~s~Ys~ll~hvA--ShGyIVV~~d~~~~~~~~-~~-------------~~~~~~~~vi~Wl~~~L 78 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINSWYSQLLEHVA--SHGYIVVAPDLYSIGGPD-DT-------------DEVASAAEVIDWLAKGL 78 (259)
T ss_pred CCcCEEEEeCCcCCCHHHHHHHHHHHH--hCceEEEEecccccCCCC-cc-------------hhHHHHHHHHHHHHhcc
Confidence 458999999999866777889999999 9999999999876 2211 11 1234455566665442
Q ss_pred ----------CCCcEEEEEeccCCccC
Q 031524 142 ----------GSKKASINNLWNFNRLA 158 (158)
Q Consensus 142 ----------~~~~I~viG~S~GG~lA 158 (158)
+..+|+|.|||-||.+|
T Consensus 79 ~~~l~~~v~~D~s~l~l~GHSrGGk~A 105 (259)
T PF12740_consen 79 ESKLPLGVKPDFSKLALAGHSRGGKVA 105 (259)
T ss_pred hhhccccccccccceEEeeeCCCCHHH
Confidence 24689999999999764
No 71
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.80 E-value=7.2e-08 Score=77.30 Aligned_cols=101 Identities=11% Similarity=0.059 Sum_probs=74.1
Q ss_pred eeEEEeeC-CceEEEEEEcCCC--CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHc
Q 031524 45 KKIQIQRD-DTTFDAYVVGKED--APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMS 120 (158)
Q Consensus 45 ~~i~i~~~-~~~l~~~~~~p~~--~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~ 120 (158)
+.+..++. +..+.+..+.|.. .+++|+.||......++..+-..|+. ...++|+.+||.| |.+++++.+.
T Consensus 36 ~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~-~ln~nv~~~DYSGyG~S~G~psE~----- 109 (258)
T KOG1552|consen 36 EVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLGQMVELFKELSI-FLNCNVVSYDYSGYGRSSGKPSER----- 109 (258)
T ss_pred ceEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchHHHHHHHHHHhh-cccceEEEEecccccccCCCcccc-----
Confidence 44455555 4477777777643 58999999975544555555556651 2589999999998 8776655332
Q ss_pred CCChhhHHHHHHHHHHHHHhCC--CCcEEEEEeccCCc
Q 031524 121 GLDWPGAVKDIHASVNWLKANG--SKKASINNLWNFNR 156 (158)
Q Consensus 121 ~~~~~~~~~di~~av~~l~~~~--~~~I~viG~S~GG~ 156 (158)
...+|+.++.+||++.. .++|+++|+|+|..
T Consensus 110 -----n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~ 142 (258)
T KOG1552|consen 110 -----NLYADIKAVYEWLRNRYGSPERIILYGQSIGTV 142 (258)
T ss_pred -----cchhhHHHHHHHHHhhcCCCceEEEEEecCCch
Confidence 35689999999999984 58999999999974
No 72
>PRK07581 hypothetical protein; Validated
Probab=98.79 E-value=9e-09 Score=84.73 Aligned_cols=92 Identities=10% Similarity=0.082 Sum_probs=51.0
Q ss_pred CCCEEEEEcccCCCChHHHHHH---HHHhhcCCCcEEEeeecCC-CCCCCCHHHH-HHHHcCCChhhHHHHHHHHHHHHH
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHA---VKISQLNPGFKALIPDLYR-GKVGLDTAEA-QHLMSGLDWPGAVKDIHASVNWLK 139 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A---~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~-~~~~~~~~~~~~~~di~~av~~l~ 139 (158)
+.|+||++|++.+....+.... ..|. ..+|.|+++|++| |.+....... ..-+..++.....+|+.+....+.
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~--~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALD--PEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLT 117 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccC--cCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHH
Confidence 3456666666554443332222 3565 6799999999999 7653211000 000111222234566665444343
Q ss_pred -hCCCCc-EEEEEeccCCccC
Q 031524 140 -ANGSKK-ASINNLWNFNRLA 158 (158)
Q Consensus 140 -~~~~~~-I~viG~S~GG~lA 158 (158)
..+.++ +.|+||||||.+|
T Consensus 118 ~~lgi~~~~~lvG~S~GG~va 138 (339)
T PRK07581 118 EKFGIERLALVVGWSMGAQQT 138 (339)
T ss_pred HHhCCCceEEEEEeCHHHHHH
Confidence 245678 4789999999864
No 73
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.77 E-value=7e-08 Score=77.80 Aligned_cols=63 Identities=10% Similarity=0.029 Sum_probs=42.1
Q ss_pred CCCceeEEEeeCC--ceEEEEEEcCC-----CCCEEEEEcccCCCChHHHHH--HHHHhhcCCCcEEEeeecC
Q 031524 41 ASPFKKIQIQRDD--TTFDAYVVGKE-----DAPGIVVVQEWWGVDFEIKNH--AVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 41 ~~~~~~i~i~~~~--~~l~~~~~~p~-----~~p~VIllHg~~G~~~~~~~~--A~~La~l~~Gy~V~~~D~~ 104 (158)
..+.+..++.+.. ..+...++.|. +.|+|+++||+.+....+... ...|++ +.||.|++||..
T Consensus 10 ~~~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~-~~g~~Vv~Pd~~ 81 (275)
T TIGR02821 10 GGTQGFYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAA-EHGLALVAPDTS 81 (275)
T ss_pred CCEEEEEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHh-hcCcEEEEeCCC
Confidence 3444666666653 36667777662 479999999998776555332 334431 579999999984
No 74
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.77 E-value=2.6e-08 Score=79.04 Aligned_cols=105 Identities=20% Similarity=0.157 Sum_probs=77.2
Q ss_pred EEEeeCCc-eEEEEEEcC-CCCCEEEEEcccCCCCh-HHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHH-HcC
Q 031524 47 IQIQRDDT-TFDAYVVGK-EDAPGIVVVQEWWGVDF-EIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHL-MSG 121 (158)
Q Consensus 47 i~i~~~~~-~l~~~~~~p-~~~p~VIllHg~~G~~~-~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~-~~~ 121 (158)
..++..|| .+.++.+.. ++.+.-|++-+..|+.. .++.+|...+ ++||.|+.+|||| |.+. +...+.. +..
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~--~~Gf~Vlt~dyRG~g~S~--p~~~~~~~~~~ 83 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAA--KAGFEVLTFDYRGIGQSR--PASLSGSQWRY 83 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhh--ccCceEEEEecccccCCC--ccccccCccch
Confidence 56777776 888888764 55677788888888865 5678999999 9999999999998 5542 1111111 222
Q ss_pred CChhhHHHHHHHHHHHHHhC-CCCcEEEEEeccCCcc
Q 031524 122 LDWPGAVKDIHASVNWLKAN-GSKKASINNLWNFNRL 157 (158)
Q Consensus 122 ~~~~~~~~di~~av~~l~~~-~~~~I~viG~S~GG~l 157 (158)
.||. ..|+.++++++++. +..+.-.||||+||.+
T Consensus 84 ~DwA--~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa 118 (281)
T COG4757 84 LDWA--RLDFPAALAALKKALPGHPLYFVGHSFGGQA 118 (281)
T ss_pred hhhh--hcchHHHHHHHHhhCCCCceEEeecccccee
Confidence 3553 47899999999875 4678899999999975
No 75
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.76 E-value=2.4e-08 Score=82.65 Aligned_cols=77 Identities=10% Similarity=-0.047 Sum_probs=48.6
Q ss_pred EEEEEcccCCCCh------------HHHHHHH---HHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHH
Q 031524 68 GIVVVQEWWGVDF------------EIKNHAV---KISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDI 131 (158)
Q Consensus 68 ~VIllHg~~G~~~------------~~~~~A~---~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di 131 (158)
.+|++||+.+... .|..... .|. ..+|.|+++|++| |.+.. ...+....++|+
T Consensus 59 p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~--~~~~~Vi~~Dl~G~g~s~~---------~~~~~~~~a~dl 127 (343)
T PRK08775 59 PVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALD--PARFRLLAFDFIGADGSLD---------VPIDTADQADAI 127 (343)
T ss_pred CEEEEecCCCcccccccccCCCCCCcchhccCCCCccC--ccccEEEEEeCCCCCCCCC---------CCCCHHHHHHHH
Confidence 3666666655544 3444443 453 4689999999998 54421 112344556777
Q ss_pred HHHHHHHHhCCCCc-EEEEEeccCCccC
Q 031524 132 HASVNWLKANGSKK-ASINNLWNFNRLA 158 (158)
Q Consensus 132 ~~av~~l~~~~~~~-I~viG~S~GG~lA 158 (158)
.+.++.+. -++ +.++||||||.+|
T Consensus 128 ~~ll~~l~---l~~~~~lvG~SmGG~vA 152 (343)
T PRK08775 128 ALLLDALG---IARLHAFVGYSYGALVG 152 (343)
T ss_pred HHHHHHcC---CCcceEEEEECHHHHHH
Confidence 77666653 334 5799999999864
No 76
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.76 E-value=1.8e-08 Score=80.99 Aligned_cols=94 Identities=14% Similarity=0.137 Sum_probs=64.7
Q ss_pred ceEEEEEEcC-----CCCCEEEEEcccCCCChHHHHH----H------HHHhhcCCCcEEEeeecCC-CCCCCCHHHHHH
Q 031524 54 TTFDAYVVGK-----EDAPGIVVVQEWWGVDFEIKNH----A------VKISQLNPGFKALIPDLYR-GKVGLDTAEAQH 117 (158)
Q Consensus 54 ~~l~~~~~~p-----~~~p~VIllHg~~G~~~~~~~~----A------~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~ 117 (158)
.+|.+-++.| ++.|+||..|++.......... . ..|+ ++||.|++.|.|| |.|++...
T Consensus 3 v~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~--~~GY~vV~~D~RG~g~S~G~~~---- 76 (272)
T PF02129_consen 3 VRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFA--ERGYAVVVQDVRGTGGSEGEFD---- 76 (272)
T ss_dssp -EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHH--HTT-EEEEEE-TTSTTS-S-B-----
T ss_pred CEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHH--hCCCEEEEECCcccccCCCccc----
Confidence 3677777766 2468999999876443111111 1 1288 8999999999999 77765321
Q ss_pred HHcCCChhhHHHHHHHHHHHHHhCC--CCcEEEEEeccCCcc
Q 031524 118 LMSGLDWPGAVKDIHASVNWLKANG--SKKASINNLWNFNRL 157 (158)
Q Consensus 118 ~~~~~~~~~~~~di~~av~~l~~~~--~~~I~viG~S~GG~l 157 (158)
.......+|..++|+|+.+++ .++|+++|.|++|..
T Consensus 77 ----~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~ 114 (272)
T PF02129_consen 77 ----PMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFT 114 (272)
T ss_dssp ----TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHH
T ss_pred ----cCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHH
Confidence 114567799999999999996 689999999999864
No 77
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.75 E-value=6.2e-08 Score=85.34 Aligned_cols=91 Identities=11% Similarity=0.141 Sum_probs=63.0
Q ss_pred eEEEEEEcCC----CCCEEEEEcccCCCChHH-----HHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCCh
Q 031524 55 TFDAYVVGKE----DAPGIVVVQEWWGVDFEI-----KNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDW 124 (158)
Q Consensus 55 ~l~~~~~~p~----~~p~VIllHg~~G~~~~~-----~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~ 124 (158)
.+.-+.+.|. ..+.||++|++.....-+ +.++++|. ++||+|+++|+++ |.+... .++
T Consensus 173 ~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~--~qGf~V~~iDwrgpg~s~~~----------~~~ 240 (532)
T TIGR01838 173 LFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLV--EQGHTVFVISWRNPDASQAD----------KTF 240 (532)
T ss_pred cEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHH--HCCcEEEEEECCCCCccccc----------CCh
Confidence 3444555552 257899999986433222 37999999 9999999999987 544221 122
Q ss_pred hhH-HHHHHHHHHHHHhC-CCCcEEEEEeccCCcc
Q 031524 125 PGA-VKDIHASVNWLKAN-GSKKASINNLWNFNRL 157 (158)
Q Consensus 125 ~~~-~~di~~av~~l~~~-~~~~I~viG~S~GG~l 157 (158)
+.. .+++.++++++++. +.++|.++||||||.+
T Consensus 241 ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl 275 (532)
T TIGR01838 241 DDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTL 275 (532)
T ss_pred hhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHH
Confidence 222 34577788887654 5789999999999975
No 78
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.72 E-value=7.5e-08 Score=78.63 Aligned_cols=89 Identities=19% Similarity=0.158 Sum_probs=64.3
Q ss_pred eEEEEEEcC--C---CCCEEEEEcccC---CCChHH-HHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChh
Q 031524 55 TFDAYVVGK--E---DAPGIVVVQEWW---GVDFEI-KNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWP 125 (158)
Q Consensus 55 ~l~~~~~~p--~---~~p~VIllHg~~---G~~~~~-~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~ 125 (158)
.++..++.| . +.|+||++||-. |..... ...+..++ ..|+.|+.+||+-. ....++
T Consensus 63 ~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~--~~g~~vv~vdYrla-------------Pe~~~p 127 (312)
T COG0657 63 GVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAA--AAGAVVVSVDYRLA-------------PEHPFP 127 (312)
T ss_pred ceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHH--HcCCEEEecCCCCC-------------CCCCCC
Confidence 366666665 2 369999999732 223333 44555556 79999999999741 122456
Q ss_pred hHHHHHHHHHHHHHhC------CCCcEEEEEeccCCccC
Q 031524 126 GAVKDIHASVNWLKAN------GSKKASINNLWNFNRLA 158 (158)
Q Consensus 126 ~~~~di~~av~~l~~~------~~~~I~viG~S~GG~lA 158 (158)
..++|+.++++|++++ +.++|+|+|+|.||++|
T Consensus 128 ~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La 166 (312)
T COG0657 128 AALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLA 166 (312)
T ss_pred chHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHH
Confidence 6788999999999876 27899999999999875
No 79
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.72 E-value=2e-08 Score=77.44 Aligned_cols=69 Identities=23% Similarity=0.304 Sum_probs=48.3
Q ss_pred HHHHHHhhcCCCcEEEeeecCCCCC-CCCHHHHHHHHcCCChh-hHHHHHHHHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 84 NHAVKISQLNPGFKALIPDLYRGKV-GLDTAEAQHLMSGLDWP-GAVKDIHASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 84 ~~A~~La~l~~Gy~V~~~D~~gG~~-~~~~~~~~~~~~~~~~~-~~~~di~~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
.....|+ ++||.|+.+|+||+.. +.+. ......++. ..++|+.++++++.+++ ++||+|+|+|+||.++
T Consensus 5 ~~~~~la--~~Gy~v~~~~~rGs~g~g~~~----~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a 78 (213)
T PF00326_consen 5 WNAQLLA--SQGYAVLVPNYRGSGGYGKDF----HEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLA 78 (213)
T ss_dssp HHHHHHH--TTT-EEEEEE-TTSSSSHHHH----HHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHH
T ss_pred HHHHHHH--hCCEEEEEEcCCCCCccchhH----HHhhhccccccchhhHHHHHHHHhccccccceeEEEEccccccccc
Confidence 4677899 9999999999998332 1111 111122333 45899999999998874 7899999999999864
No 80
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.69 E-value=5.3e-08 Score=80.82 Aligned_cols=89 Identities=10% Similarity=0.018 Sum_probs=55.5
Q ss_pred CCCEEEEEcccCCCChH-----------HHHHH---HHHhhcCCCcEEEeeecCC--CCCCC--CH-HHHHHH---HcCC
Q 031524 65 DAPGIVVVQEWWGVDFE-----------IKNHA---VKISQLNPGFKALIPDLYR--GKVGL--DT-AEAQHL---MSGL 122 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~-----------~~~~A---~~La~l~~Gy~V~~~D~~g--G~~~~--~~-~~~~~~---~~~~ 122 (158)
..|+||++||+.+.... +..+. ..|. ..+|.|+++|++| +.+.. +. .....+ ...+
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~--~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~ 107 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAID--TDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLI 107 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcC--CCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCC
Confidence 35799999999885422 33332 3565 7899999999998 22211 10 000001 0123
Q ss_pred ChhhHHHHHHHHHHHHHhCCCCc-EEEEEeccCCccC
Q 031524 123 DWPGAVKDIHASVNWLKANGSKK-ASINNLWNFNRLA 158 (158)
Q Consensus 123 ~~~~~~~di~~av~~l~~~~~~~-I~viG~S~GG~lA 158 (158)
+.+.+.+|+.+.++.+ +-++ +.++||||||.++
T Consensus 108 ~~~~~~~~~~~~~~~l---~~~~~~~l~G~S~Gg~ia 141 (351)
T TIGR01392 108 TIRDDVKAQKLLLDHL---GIEQIAAVVGGSMGGMQA 141 (351)
T ss_pred cHHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHH
Confidence 4556677777776665 3456 9999999999864
No 81
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.68 E-value=1e-07 Score=93.31 Aligned_cols=87 Identities=11% Similarity=0.075 Sum_probs=61.6
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHH-HHHHHcCCChhhHHHHHHHHHHHHHhCCC
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAE-AQHLMSGLDWPGAVKDIHASVNWLKANGS 143 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~-~~~~~~~~~~~~~~~di~~av~~l~~~~~ 143 (158)
.|.||++||+.+....+..++..|+ + +|+|+++|++| |.+...... .......++.+...+++.+.++.+ ..
T Consensus 1371 ~~~vVllHG~~~s~~~w~~~~~~L~--~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l---~~ 1444 (1655)
T PLN02980 1371 GSVVLFLHGFLGTGEDWIPIMKAIS--G-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI---TP 1444 (1655)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHh--C-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh---CC
Confidence 5799999999999888888898887 4 69999999998 765321100 000001234556666666666654 35
Q ss_pred CcEEEEEeccCCccC
Q 031524 144 KKASINNLWNFNRLA 158 (158)
Q Consensus 144 ~~I~viG~S~GG~lA 158 (158)
+++.++||||||.+|
T Consensus 1445 ~~v~LvGhSmGG~iA 1459 (1655)
T PLN02980 1445 GKVTLVGYSMGARIA 1459 (1655)
T ss_pred CCEEEEEECHHHHHH
Confidence 789999999999864
No 82
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.67 E-value=1.9e-08 Score=77.09 Aligned_cols=75 Identities=20% Similarity=0.273 Sum_probs=54.2
Q ss_pred EEEEccc---CCCChHHHHHHHHHhhcC-CCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC---
Q 031524 69 IVVVQEW---WGVDFEIKNHAVKISQLN-PGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN--- 141 (158)
Q Consensus 69 VIllHg~---~G~~~~~~~~A~~La~l~-~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~--- 141 (158)
||++||- .|.......++..++ + .|+.|+.+||+-. .....++.++|+.++++|+.++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la--~~~g~~v~~~~Yrl~-------------p~~~~p~~~~D~~~a~~~l~~~~~~ 65 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLA--AERGFVVVSIDYRLA-------------PEAPFPAALEDVKAAYRWLLKNADK 65 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHH--HHHTSEEEEEE---T-------------TTSSTTHHHHHHHHHHHHHHHTHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHH--hhccEEEEEeecccc-------------ccccccccccccccceeeecccccc
Confidence 7899973 244455567788887 5 8999999999842 1124567789999999999886
Q ss_pred ---CCCcEEEEEeccCCccC
Q 031524 142 ---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 142 ---~~~~I~viG~S~GG~lA 158 (158)
+.++|.|+|+|.||.+|
T Consensus 66 ~~~d~~~i~l~G~SAGg~la 85 (211)
T PF07859_consen 66 LGIDPERIVLIGDSAGGHLA 85 (211)
T ss_dssp HTEEEEEEEEEEETHHHHHH
T ss_pred ccccccceEEeecccccchh
Confidence 26899999999999874
No 83
>PRK11071 esterase YqiA; Provisional
Probab=98.67 E-value=4.7e-08 Score=75.10 Aligned_cols=72 Identities=13% Similarity=0.057 Sum_probs=49.0
Q ss_pred CEEEEEcccCCCChHHH--HHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCC
Q 031524 67 PGIVVVQEWWGVDFEIK--NHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSK 144 (158)
Q Consensus 67 p~VIllHg~~G~~~~~~--~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~ 144 (158)
|.||++||+.+....+. .++..+++...+|.|+++|+++- + +...+++...++. .+.+
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~-----~------------~~~~~~l~~l~~~---~~~~ 61 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPY-----P------------ADAAELLESLVLE---HGGD 61 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCC-----H------------HHHHHHHHHHHHH---cCCC
Confidence 68999999988876555 35566661124899999999852 1 1223444444443 3456
Q ss_pred cEEEEEeccCCccC
Q 031524 145 KASINNLWNFNRLA 158 (158)
Q Consensus 145 ~I~viG~S~GG~lA 158 (158)
++.++|+||||.+|
T Consensus 62 ~~~lvG~S~Gg~~a 75 (190)
T PRK11071 62 PLGLVGSSLGGYYA 75 (190)
T ss_pred CeEEEEECHHHHHH
Confidence 89999999999864
No 84
>PLN02442 S-formylglutathione hydrolase
Probab=98.66 E-value=2.3e-07 Score=75.28 Aligned_cols=113 Identities=12% Similarity=0.022 Sum_probs=64.1
Q ss_pred ceeEEEeeCC--ceEEEEEEcCC-----CCCEEEEEcccCCCChHHH---HHHHHHhhcCCCcEEEeeecCC-CCC-CCC
Q 031524 44 FKKIQIQRDD--TTFDAYVVGKE-----DAPGIVVVQEWWGVDFEIK---NHAVKISQLNPGFKALIPDLYR-GKV-GLD 111 (158)
Q Consensus 44 ~~~i~i~~~~--~~l~~~~~~p~-----~~p~VIllHg~~G~~~~~~---~~A~~La~l~~Gy~V~~~D~~g-G~~-~~~ 111 (158)
.+.+++.++. ..+..+++.|. +.|+|+++||+.+....+. .+.+.++ ..||.|++||..+ |.. ..+
T Consensus 18 ~~~~~~~s~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~--~~g~~Vv~pd~~~~g~~~~~~ 95 (283)
T PLN02442 18 NRRYKHFSSTLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAA--ARGIALVAPDTSPRGLNVEGE 95 (283)
T ss_pred EEEEEEeccccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHh--hcCeEEEecCCCCCCCCCCCC
Confidence 4555666643 36677776662 4799999999988765443 3446667 7899999999764 311 000
Q ss_pred H---HH--HHH-HH--cCCCh------hhHHHHHHHHHHHH-HhCCCCcEEEEEeccCCccC
Q 031524 112 T---AE--AQH-LM--SGLDW------PGAVKDIHASVNWL-KANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 112 ~---~~--~~~-~~--~~~~~------~~~~~di~~av~~l-~~~~~~~I~viG~S~GG~lA 158 (158)
. .. ... +. ...++ ....+++...++.. ...+.++++|+||||||..|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a 157 (283)
T PLN02442 96 ADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGA 157 (283)
T ss_pred ccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHH
Confidence 0 00 000 00 00000 11234444444333 22246889999999999753
No 85
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.66 E-value=1.2e-07 Score=74.70 Aligned_cols=105 Identities=13% Similarity=0.159 Sum_probs=76.5
Q ss_pred ceeEEEeeCCc-eEEEEEEcCCCCCEEEEEcccCCCC--hHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHH
Q 031524 44 FKKIQIQRDDT-TFDAYVVGKEDAPGIVVVQEWWGVD--FEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLM 119 (158)
Q Consensus 44 ~~~i~i~~~~~-~l~~~~~~p~~~p~VIllHg~~G~~--~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~ 119 (158)
.+.|.|+.... .+-+.+..-+....||++||+.+.. ..+..+|.+|+ +.||-++.+||+| |.+.+... .
T Consensus 10 ~~~ivi~n~~ne~lvg~lh~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e--~~gis~fRfDF~GnGeS~gsf~-----~ 82 (269)
T KOG4667|consen 10 AQKIVIPNSRNEKLVGLLHETGSTEIVVLCHGFRSHKNAIIMKNVAKALE--KEGISAFRFDFSGNGESEGSFY-----Y 82 (269)
T ss_pred eeEEEeccCCCchhhcceeccCCceEEEEeeccccccchHHHHHHHHHHH--hcCceEEEEEecCCCCcCCccc-----c
Confidence 45677776543 6666555556678999999998774 46788999999 9999999999998 77755431 1
Q ss_pred cCCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCcc
Q 031524 120 SGLDWPGAVKDIHASVNWLKANGSKKASINNLWNFNRL 157 (158)
Q Consensus 120 ~~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~l 157 (158)
+ +....++|+..+++++....----.|+|||-||.+
T Consensus 83 G--n~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~V 118 (269)
T KOG4667|consen 83 G--NYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDV 118 (269)
T ss_pred C--cccchHHHHHHHHHHhccCceEEEEEEeecCccHH
Confidence 2 22234599999999997642112357999999865
No 86
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.64 E-value=1.2e-07 Score=79.10 Aligned_cols=128 Identities=13% Similarity=0.066 Sum_probs=77.1
Q ss_pred cCCCCCCCcccccccccccCCCCceeEEEeeCCc-eEEEEEEcC--CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcE
Q 031524 21 ARTHFPAGYRFAVRSMADSAASPFKKIQIQRDDT-TFDAYVVGK--EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFK 97 (158)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~-~l~~~~~~p--~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~ 97 (158)
-.+.+.+.+++.++.+.+.-..+.+.......++ .+-.....+ .....+|++||+++.-..+..--+.|+ + .+.
T Consensus 42 w~~~~~~~l~~~e~ril~~~~v~~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La--~-~~~ 118 (365)
T KOG4409|consen 42 WCSTSRDQLKEAEKRILSSVPVPYSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLA--K-IRN 118 (365)
T ss_pred cccchHHHHHHHHHhhhhhcCCCcceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhh--h-cCc
Confidence 3444555677777666655544444333333332 333333333 346889999998876666666667787 5 899
Q ss_pred EEeeecCC-CCCCCCHHHHHHHHcCCChhh-HHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 98 ALIPDLYR-GKVGLDTAEAQHLMSGLDWPG-AVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 98 V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~-~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
|+++|+.| |.+.. |. + . .|... ...-++..-+|-++++-++..|+||||||.+|
T Consensus 119 vyaiDllG~G~SSR-P~----F-~-~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLa 174 (365)
T KOG4409|consen 119 VYAIDLLGFGRSSR-PK----F-S-IDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLA 174 (365)
T ss_pred eEEecccCCCCCCC-CC----C-C-CCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHH
Confidence 99999999 76532 10 0 0 01111 11233444455555666899999999999875
No 87
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.64 E-value=1.1e-07 Score=81.92 Aligned_cols=87 Identities=13% Similarity=0.168 Sum_probs=56.1
Q ss_pred CCCEEEEEcccCCCC--hH-HHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHh
Q 031524 65 DAPGIVVVQEWWGVD--FE-IKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKA 140 (158)
Q Consensus 65 ~~p~VIllHg~~G~~--~~-~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~ 140 (158)
..|.+|++|||.+.. .. ...++..|...+..|+|+++|+++ |.+.. ++.. .....+.+++...+++|.+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y-~~a~------~~t~~vg~~la~lI~~L~~ 112 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHY-PTSA------AYTKLVGKDVAKFVNWMQE 112 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCC-cccc------ccHHHHHHHHHHHHHHHHH
Confidence 468999999997643 22 334666553102369999999997 43321 1110 1223445677778888754
Q ss_pred C---CCCcEEEEEeccCCccC
Q 031524 141 N---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 141 ~---~~~~I~viG~S~GG~lA 158 (158)
. +.+++.+|||||||.+|
T Consensus 113 ~~gl~l~~VhLIGHSLGAhIA 133 (442)
T TIGR03230 113 EFNYPWDNVHLLGYSLGAHVA 133 (442)
T ss_pred hhCCCCCcEEEEEECHHHHHH
Confidence 3 35799999999999874
No 88
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.62 E-value=1.7e-07 Score=83.26 Aligned_cols=108 Identities=14% Similarity=0.157 Sum_probs=76.8
Q ss_pred eeEEEeeCCc-eEEEEEEcC------CCCCEEEEEcccCCCC---hHH----HHHHHHHhhcCCCcEEEeeecCC-CCCC
Q 031524 45 KKIQIQRDDT-TFDAYVVGK------EDAPGIVVVQEWWGVD---FEI----KNHAVKISQLNPGFKALIPDLYR-GKVG 109 (158)
Q Consensus 45 ~~i~i~~~~~-~l~~~~~~p------~~~p~VIllHg~~G~~---~~~----~~~A~~La~l~~Gy~V~~~D~~g-G~~~ 109 (158)
+.|.+++..+ .+-+.+++| ++.|+|+.+.|..++. ..+ .--..+|| ..||.|+++|-|| -..+
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~La--slGy~Vv~IDnRGS~hRG 691 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLA--SLGYVVVFIDNRGSAHRG 691 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhh--hcceEEEEEcCCCccccc
Confidence 5577888665 999999997 3589999998866542 111 11245788 8999999999998 3344
Q ss_pred CCHHHH-HHHHcCCChhhHHHHHHHHHHHHHhC----CCCcEEEEEeccCCccC
Q 031524 110 LDTAEA-QHLMSGLDWPGAVKDIHASVNWLKAN----GSKKASINNLWNFNRLA 158 (158)
Q Consensus 110 ~~~~~~-~~~~~~~~~~~~~~di~~av~~l~~~----~~~~I~viG~S~GG~lA 158 (158)
-..+.. ++.|+..+ ++|..+.+++|.++ +-+||+|.|||.||.++
T Consensus 692 lkFE~~ik~kmGqVE----~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLS 741 (867)
T KOG2281|consen 692 LKFESHIKKKMGQVE----VEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLS 741 (867)
T ss_pred hhhHHHHhhccCeee----ehhhHHHHHHHHHhcCcccchheeEeccccccHHH
Confidence 444432 22344443 46777889999887 26899999999999874
No 89
>PRK11460 putative hydrolase; Provisional
Probab=98.61 E-value=6.7e-08 Score=76.34 Aligned_cols=90 Identities=9% Similarity=0.069 Sum_probs=55.2
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHc--CC-------ChhhHHHHHHHH
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMS--GL-------DWPGAVKDIHAS 134 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~--~~-------~~~~~~~di~~a 134 (158)
..|.||++||+.++...+..++..|+ +.++.+..+++++ ....... ...+.. .. +.....+++.+.
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~--~~~~~~~~i~~~g~~~~~~~~--g~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFA--PAFPDALVVSVGGPEPSGNGA--GRQWFSVQGITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHH--HHCCCCEEECCCCCCCcCCCC--CcccccCCCCCccchHHHHHHHHHHHHHH
Confidence 46899999999999888999999998 7776655555554 1111000 001110 00 111223344455
Q ss_pred HHHHHhC---CCCcEEEEEeccCCccC
Q 031524 135 VNWLKAN---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 135 v~~l~~~---~~~~I~viG~S~GG~lA 158 (158)
++++.++ +.++|+++|||+||.++
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~a 117 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMA 117 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHH
Confidence 5665444 25789999999999764
No 90
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.57 E-value=1.9e-07 Score=78.33 Aligned_cols=111 Identities=15% Similarity=0.025 Sum_probs=74.9
Q ss_pred ceeEEEeeCC--ceEEEEEEcC----C-----CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCH
Q 031524 44 FKKIQIQRDD--TTFDAYVVGK----E-----DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDT 112 (158)
Q Consensus 44 ~~~i~i~~~~--~~l~~~~~~p----~-----~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~ 112 (158)
...+++.... ..+..++..| + +.|.|++-||..+....+..+|+.|+ +.||.|.+++..|.....-+
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f~~~A~~lA--s~Gf~Va~~~hpgs~~~~~~ 115 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGFAWLAEHLA--SYGFVVAAPDHPGSNAGGAP 115 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCCccchhhhHHHHh--hCceEEEeccCCCcccccCC
Confidence 4566666543 3555555444 2 46999999999888888889999999 99999999999872211100
Q ss_pred HHHHHH---HcCCChhhHHHHHHHHHHHHHhC---C-------CCcEEEEEeccCCcc
Q 031524 113 AEAQHL---MSGLDWPGAVKDIHASVNWLKAN---G-------SKKASINNLWNFNRL 157 (158)
Q Consensus 113 ~~~~~~---~~~~~~~~~~~di~~av~~l~~~---~-------~~~I~viG~S~GG~l 157 (158)
. ...- .....|.+...|+...+++|.+. + ..+|+++|||+||+.
T Consensus 116 ~-~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T 172 (365)
T COG4188 116 A-AYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYT 172 (365)
T ss_pred h-hhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHH
Confidence 0 0000 01112334567888888887665 3 579999999999974
No 91
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.53 E-value=2.4e-07 Score=76.48 Aligned_cols=83 Identities=12% Similarity=0.135 Sum_probs=67.4
Q ss_pred CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC-
Q 031524 64 EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN- 141 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~- 141 (158)
.+.|.+|++||..|....++.+++.|++ +.|-.|+++|.|. |.++. ...++.++..+|+...++..+..
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~-~l~~~v~~vd~RnHG~Sp~--------~~~h~~~~ma~dv~~Fi~~v~~~~ 120 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSR-KLGRDVYAVDVRNHGSSPK--------ITVHNYEAMAEDVKLFIDGVGGST 120 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcc-cccCceEEEecccCCCCcc--------ccccCHHHHHHHHHHHHHHccccc
Confidence 4689999999999999999999999985 5688999999996 77653 12346777788888888877532
Q ss_pred CCCcEEEEEeccCC
Q 031524 142 GSKKASINNLWNFN 155 (158)
Q Consensus 142 ~~~~I~viG~S~GG 155 (158)
...++.++||||||
T Consensus 121 ~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 121 RLDPVVLLGHSMGG 134 (315)
T ss_pred ccCCceecccCcch
Confidence 25789999999999
No 92
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.52 E-value=5.7e-07 Score=72.06 Aligned_cols=101 Identities=15% Similarity=0.187 Sum_probs=64.4
Q ss_pred EeeCCc-eEEEEEEcCC-----CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC--CCCCCCHHHHHHHHc
Q 031524 49 IQRDDT-TFDAYVVGKE-----DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR--GKVGLDTAEAQHLMS 120 (158)
Q Consensus 49 i~~~~~-~l~~~~~~p~-----~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g--G~~~~~~~~~~~~~~ 120 (158)
+.-+++ .+..|...|+ +.+.||+.+|+.-.-.++..+|.+|+ .+||+|+.+|--. |.+.++. .
T Consensus 7 i~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~--~NGFhViRyDsl~HvGlSsG~I-------~ 77 (294)
T PF02273_consen 7 IRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLS--ANGFHVIRYDSLNHVGLSSGDI-------N 77 (294)
T ss_dssp EEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHH--TTT--EEEE---B-----------------
T ss_pred eEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHh--hCCeEEEeccccccccCCCCCh-------h
Confidence 334554 8888988873 36899999998887889999999999 9999999999875 6665432 3
Q ss_pred CCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 121 GLDWPGAVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 121 ~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
.+......+++..+++|+++++..+++++--|+-|.+|
T Consensus 78 eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIA 115 (294)
T PF02273_consen 78 EFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIA 115 (294)
T ss_dssp ---HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHH
T ss_pred hcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHH
Confidence 34666778999999999999888999999999877653
No 93
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.50 E-value=1.4e-07 Score=79.98 Aligned_cols=42 Identities=10% Similarity=0.128 Sum_probs=29.9
Q ss_pred CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCC
Q 031524 64 EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGK 107 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~ 107 (158)
++.|+||+-||..|.+..+-.+|..|| .+||.|+++|.++|.
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLA--S~GyVV~aieHrDgS 139 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELA--SHGYVVAAIEHRDGS 139 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHH--HTT-EEEEE---SS-
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHH--hCCeEEEEeccCCCc
Confidence 568999999999999999999999999 999999999999753
No 94
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.50 E-value=3.9e-07 Score=76.71 Aligned_cols=88 Identities=8% Similarity=0.006 Sum_probs=55.8
Q ss_pred CCEEEEEcccCCCChH-------------HHHHH---HHHhhcCCCcEEEeeecCC--CCCC--CC--HHHHHHH---Hc
Q 031524 66 APGIVVVQEWWGVDFE-------------IKNHA---VKISQLNPGFKALIPDLYR--GKVG--LD--TAEAQHL---MS 120 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~-------------~~~~A---~~La~l~~Gy~V~~~D~~g--G~~~--~~--~~~~~~~---~~ 120 (158)
.|+||++||+.+.... +..+. ..|. ..+|.|+++|++| +.+. .+ +.....+ ..
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~--~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~ 125 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPID--TDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFP 125 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccC--ccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCC
Confidence 6899999999887653 23332 2343 5799999999987 3221 11 0000000 01
Q ss_pred CCChhhHHHHHHHHHHHHHhCCCCc-EEEEEeccCCccC
Q 031524 121 GLDWPGAVKDIHASVNWLKANGSKK-ASINNLWNFNRLA 158 (158)
Q Consensus 121 ~~~~~~~~~di~~av~~l~~~~~~~-I~viG~S~GG~lA 158 (158)
.++.+.+.+|+.+.++.+. -++ +.++||||||.++
T Consensus 126 ~~~~~~~~~~~~~~l~~l~---~~~~~~lvG~S~Gg~ia 161 (379)
T PRK00175 126 VITIRDWVRAQARLLDALG---ITRLAAVVGGSMGGMQA 161 (379)
T ss_pred cCCHHHHHHHHHHHHHHhC---CCCceEEEEECHHHHHH
Confidence 3466677788888777763 356 5899999999764
No 95
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.44 E-value=1.9e-07 Score=73.76 Aligned_cols=83 Identities=17% Similarity=0.112 Sum_probs=47.6
Q ss_pred CEEEEEcccCC-CChHHHHHHHHHhhcCCCcE---EEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC-
Q 031524 67 PGIVVVQEWWG-VDFEIKNHAVKISQLNPGFK---ALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN- 141 (158)
Q Consensus 67 p~VIllHg~~G-~~~~~~~~A~~La~l~~Gy~---V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~- 141 (158)
..|||+||.++ ....|..++..|. ++||. +++++|-.+......... . ... +.++++.+.|+.+++.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~--~~GY~~~~vya~tyg~~~~~~~~~~~---~--~~~-~~~~~l~~fI~~Vl~~T 73 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLK--AAGYCDSEVYALTYGSGNGSPSVQNA---H--MSC-ESAKQLRAFIDAVLAYT 73 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHH--HTT--CCCEEEE--S-CCHHTHHHHH---H--B-H-HHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHH--HcCCCcceeEeccCCCCCCCCccccc---c--cch-hhHHHHHHHHHHHHHhh
Confidence 36899999988 4567888999999 99999 799997332211111111 1 111 2336677777776554
Q ss_pred CCCcEEEEEeccCCccC
Q 031524 142 GSKKASINNLWNFNRLA 158 (158)
Q Consensus 142 ~~~~I~viG~S~GG~lA 158 (158)
+. ||-||||||||.++
T Consensus 74 Ga-kVDIVgHS~G~~ia 89 (219)
T PF01674_consen 74 GA-KVDIVGHSMGGTIA 89 (219)
T ss_dssp T---EEEEEETCHHHHH
T ss_pred CC-EEEEEEcCCcCHHH
Confidence 57 99999999998753
No 96
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.44 E-value=1.8e-06 Score=72.00 Aligned_cols=107 Identities=18% Similarity=0.171 Sum_probs=76.9
Q ss_pred CCCCceeEEEeeCCceEEEEEEc-C--CCCCEEEEEcccCCCChH--H----HHHHHHHhhcCCCcEEEeeecCC-CCCC
Q 031524 40 AASPFKKIQIQRDDTTFDAYVVG-K--EDAPGIVVVQEWWGVDFE--I----KNHAVKISQLNPGFKALIPDLYR-GKVG 109 (158)
Q Consensus 40 ~~~~~~~i~i~~~~~~l~~~~~~-p--~~~p~VIllHg~~G~~~~--~----~~~A~~La~l~~Gy~V~~~D~~g-G~~~ 109 (158)
.....+.|.|+.++..+++.... | .+..+||+.-|..+.-+. + ...-..++. +.|-+|+.+||+| |.+.
T Consensus 108 ~~~~~kRv~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak-~~~aNvl~fNYpGVg~S~ 186 (365)
T PF05677_consen 108 EVSSVKRVPIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAK-ELGANVLVFNYPGVGSST 186 (365)
T ss_pred cccceeeEEEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHH-HcCCcEEEECCCccccCC
Confidence 34456788999877788888766 3 245799999976554333 1 012223332 5689999999999 8775
Q ss_pred CCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC--C--CCcEEEEEeccCCcc
Q 031524 110 LDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN--G--SKKASINNLWNFNRL 157 (158)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~--~--~~~I~viG~S~GG~l 157 (158)
+. .+.+..++|-.+.++||+.+ + +++|.+.|||+||.+
T Consensus 187 G~----------~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~V 228 (365)
T PF05677_consen 187 GP----------PSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGV 228 (365)
T ss_pred CC----------CCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHH
Confidence 42 24567789999999999864 2 588999999999976
No 97
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.42 E-value=1.1e-06 Score=73.06 Aligned_cols=84 Identities=17% Similarity=0.135 Sum_probs=55.1
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCC-CcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNP-GFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG 142 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~-Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~ 142 (158)
..|.||++|||.++..+++.....|. +. |+.|+++|+.| |++...+ .. ..++....++-+. ++.++..
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~--~~~~~~v~aiDl~G~g~~s~~~-~~----~~y~~~~~v~~i~---~~~~~~~ 126 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLS--KAKGLRVLAIDLPGHGYSSPLP-RG----PLYTLRELVELIR---RFVKEVF 126 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccc--cccceEEEEEecCCCCcCCCCC-CC----CceehhHHHHHHH---HHHHhhc
Confidence 47899999999998888988888887 44 69999999998 5332111 00 0012222222222 2223323
Q ss_pred CCcEEEEEeccCCccC
Q 031524 143 SKKASINNLWNFNRLA 158 (158)
Q Consensus 143 ~~~I~viG~S~GG~lA 158 (158)
.+++.++|||+||.+|
T Consensus 127 ~~~~~lvghS~Gg~va 142 (326)
T KOG1454|consen 127 VEPVSLVGHSLGGIVA 142 (326)
T ss_pred CcceEEEEeCcHHHHH
Confidence 4569999999999864
No 98
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.40 E-value=1.3e-06 Score=69.09 Aligned_cols=84 Identities=7% Similarity=0.059 Sum_probs=50.2
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHh------hcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHH
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKIS------QLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLK 139 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La------~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~ 139 (158)
+..|||+||..|....++.++..+. .-...+++++.||....+.... .......+-+..+++++.
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g---------~~l~~q~~~~~~~i~~i~ 74 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHG---------RTLQRQAEFLAEAIKYIL 74 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccc---------ccHHHHHHHHHHHHHHHH
Confidence 4689999999888877777776552 0133688999998652221100 011111122333333332
Q ss_pred h----C--CCCcEEEEEeccCCccC
Q 031524 140 A----N--GSKKASINNLWNFNRLA 158 (158)
Q Consensus 140 ~----~--~~~~I~viG~S~GG~lA 158 (158)
+ . +.++|.+|||||||.+|
T Consensus 75 ~~~~~~~~~~~~vilVgHSmGGlva 99 (225)
T PF07819_consen 75 ELYKSNRPPPRSVILVGHSMGGLVA 99 (225)
T ss_pred HhhhhccCCCCceEEEEEchhhHHH
Confidence 2 1 37899999999999764
No 99
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.40 E-value=1.6e-06 Score=76.65 Aligned_cols=91 Identities=14% Similarity=0.087 Sum_probs=65.6
Q ss_pred eEEEEEEcCC----CCCEEEEEcccCCCChHH------HHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCC
Q 031524 55 TFDAYVVGKE----DAPGIVVVQEWWGVDFEI------KNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLD 123 (158)
Q Consensus 55 ~l~~~~~~p~----~~p~VIllHg~~G~~~~~------~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~ 123 (158)
.+.-+.+.|. -...||+++.+. ++.++ +++.++|. ++||+|+++|.+. +.. ....+
T Consensus 200 l~eLiqY~P~te~v~~~PLLIVPp~I-NK~YIlDL~P~~SlVr~lv--~qG~~VflIsW~nP~~~----------~r~~~ 266 (560)
T TIGR01839 200 VLELIQYKPITEQQHARPLLVVPPQI-NKFYIFDLSPEKSFVQYCL--KNQLQVFIISWRNPDKA----------HREWG 266 (560)
T ss_pred ceEEEEeCCCCCCcCCCcEEEechhh-hhhheeecCCcchHHHHHH--HcCCeEEEEeCCCCChh----------hcCCC
Confidence 3444555662 145777788765 23332 57899999 9999999999865 211 12346
Q ss_pred hhhHHHHHHHHHHHHHhC-CCCcEEEEEeccCCccC
Q 031524 124 WPGAVKDIHASVNWLKAN-GSKKASINNLWNFNRLA 158 (158)
Q Consensus 124 ~~~~~~di~~av~~l~~~-~~~~I~viG~S~GG~lA 158 (158)
++..++.+.++++.+++. +.++|.++|||+||.++
T Consensus 267 ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~ 302 (560)
T TIGR01839 267 LSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTC 302 (560)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHH
Confidence 677778899999999876 57899999999999763
No 100
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.37 E-value=1.6e-06 Score=81.27 Aligned_cols=84 Identities=8% Similarity=0.047 Sum_probs=55.6
Q ss_pred CCEEEEEcccCCCChHHHH-----HHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHh
Q 031524 66 APGIVVVQEWWGVDFEIKN-----HAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKA 140 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~-----~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~ 140 (158)
.+.||++||+......+.. +...|+ ++||+|+++|+ | .+.. .+. . ...+....+.++.++++.+++
T Consensus 67 ~~plllvhg~~~~~~~~d~~~~~s~v~~L~--~~g~~v~~~d~-G-~~~~--~~~--~-~~~~l~~~i~~l~~~l~~v~~ 137 (994)
T PRK07868 67 GPPVLMVHPMMMSADMWDVTRDDGAVGILH--RAGLDPWVIDF-G-SPDK--VEG--G-MERNLADHVVALSEAIDTVKD 137 (994)
T ss_pred CCcEEEECCCCCCccceecCCcccHHHHHH--HCCCEEEEEcC-C-CCCh--hHc--C-ccCCHHHHHHHHHHHHHHHHH
Confidence 5899999998665544432 478898 89999999995 3 3211 111 0 012444444556666776655
Q ss_pred CCCCcEEEEEeccCCccC
Q 031524 141 NGSKKASINNLWNFNRLA 158 (158)
Q Consensus 141 ~~~~~I~viG~S~GG~lA 158 (158)
...+++.++||||||.++
T Consensus 138 ~~~~~v~lvG~s~GG~~a 155 (994)
T PRK07868 138 VTGRDVHLVGYSQGGMFC 155 (994)
T ss_pred hhCCceEEEEEChhHHHH
Confidence 544689999999999864
No 101
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.32 E-value=6e-07 Score=74.91 Aligned_cols=87 Identities=14% Similarity=0.214 Sum_probs=52.7
Q ss_pred CCCEEEEEcccCCCC---hHHHHHHHHHhhcC--CCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHH
Q 031524 65 DAPGIVVVQEWWGVD---FEIKNHAVKISQLN--PGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLK 139 (158)
Q Consensus 65 ~~p~VIllHg~~G~~---~~~~~~A~~La~l~--~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~ 139 (158)
+.|++|++|||.+.. ..+..+.+.|.+ . ..++|+++|+..+... ....+.. +...+.+.+...+++|.
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~-~~~~d~NVI~VDWs~~a~~-~Y~~a~~-----n~~~vg~~la~~l~~L~ 142 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQ-KDTGDYNVIVVDWSRGASN-NYPQAVA-----NTRLVGRQLAKFLSFLI 142 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHC-C--S-EEEEEEE-HHHHSS--HHHHHH-----HHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHh-hccCCceEEEEcchhhccc-cccchhh-----hHHHHHHHHHHHHHHHH
Confidence 579999999998766 455666665541 4 5899999999653322 2222111 22334455666677776
Q ss_pred hC---CCCcEEEEEeccCCccC
Q 031524 140 AN---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 140 ~~---~~~~I~viG~S~GG~lA 158 (158)
+. +.++|.+||||+||.+|
T Consensus 143 ~~~g~~~~~ihlIGhSLGAHva 164 (331)
T PF00151_consen 143 NNFGVPPENIHLIGHSLGAHVA 164 (331)
T ss_dssp HHH---GGGEEEEEETCHHHHH
T ss_pred hhcCCChhHEEEEeeccchhhh
Confidence 32 47899999999999864
No 102
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.31 E-value=1.1e-06 Score=71.78 Aligned_cols=112 Identities=16% Similarity=0.086 Sum_probs=73.7
Q ss_pred CceeEEEeeCCceEEEEEEcCC----CCCEEEEEcccCCCChHHHHHH--HHHhhcCCCcEEEeeecCCCCCCCCHHHHH
Q 031524 43 PFKKIQIQRDDTTFDAYVVGKE----DAPGIVVVQEWWGVDFEIKNHA--VKISQLNPGFKALIPDLYRGKVGLDTAEAQ 116 (158)
Q Consensus 43 ~~~~i~i~~~~~~l~~~~~~p~----~~p~VIllHg~~G~~~~~~~~A--~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~ 116 (158)
..+..++...+...+.+++.|. +.|.||++||-.+....+.... ++||+ ++||.|+.||=+.+.-.. .-..
T Consensus 34 ~~~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd-~~gFlV~yPdg~~~~wn~--~~~~ 110 (312)
T COG3509 34 GSSVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALAD-REGFLVAYPDGYDRAWNA--NGCG 110 (312)
T ss_pred cCCccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhc-ccCcEEECcCccccccCC--Cccc
Confidence 3345567777778888888872 3579999999988877666655 66765 689999999766421100 0000
Q ss_pred HHHcC----CChhhHHHHHHHHHHHHHhC---CCCcEEEEEeccCCccC
Q 031524 117 HLMSG----LDWPGAVKDIHASVNWLKAN---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 117 ~~~~~----~~~~~~~~di~~av~~l~~~---~~~~I~viG~S~GG~lA 158 (158)
++... .+. ..+..|.+.++.+... ++.||.|.|+|.||.++
T Consensus 111 ~~~~p~~~~~g~-ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma 158 (312)
T COG3509 111 NWFGPADRRRGV-DDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMA 158 (312)
T ss_pred ccCCcccccCCc-cHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHH
Confidence 01000 111 2356677777777666 36899999999999864
No 103
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.29 E-value=5.3e-06 Score=64.15 Aligned_cols=77 Identities=16% Similarity=0.011 Sum_probs=61.6
Q ss_pred EEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC-CCCcE
Q 031524 68 GIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN-GSKKA 146 (158)
Q Consensus 68 ~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~-~~~~I 146 (158)
.+|++.|=.|.+..-..+|+.|+ ++|+.|+.+|-.. .+..+-++++...|+..++++..++ ..+++
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~--~~G~~VvGvdsl~-----------Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~~~v 70 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALA--KQGVPVVGVDSLR-----------YFWSERTPEQTAADLARIIRHYRARWGRKRV 70 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHH--HCCCeEEEechHH-----------HHhhhCCHHHHHHHHHHHHHHHHHHhCCceE
Confidence 57788887777777778999999 9999999998542 2333447778889999999887665 57899
Q ss_pred EEEEeccCCcc
Q 031524 147 SINNLWNFNRL 157 (158)
Q Consensus 147 ~viG~S~GG~l 157 (158)
.++|||+|+-+
T Consensus 71 vLiGYSFGADv 81 (192)
T PF06057_consen 71 VLIGYSFGADV 81 (192)
T ss_pred EEEeecCCchh
Confidence 99999999843
No 104
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.22 E-value=1.8e-05 Score=64.66 Aligned_cols=81 Identities=10% Similarity=-0.075 Sum_probs=58.6
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCC
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSK 144 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~ 144 (158)
..+||-+||-.|+...++-+...|. +.|++++.++|+| |.++..++. .++..+...-+.+.++.|.- .+
T Consensus 35 ~gTVv~~hGsPGSH~DFkYi~~~l~--~~~iR~I~iN~PGf~~t~~~~~~------~~~n~er~~~~~~ll~~l~i--~~ 104 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFKYIRPPLD--EAGIRFIGINYPGFGFTPGYPDQ------QYTNEERQNFVNALLDELGI--KG 104 (297)
T ss_pred ceeEEEecCCCCCccchhhhhhHHH--HcCeEEEEeCCCCCCCCCCCccc------ccChHHHHHHHHHHHHHcCC--CC
Confidence 4489999999999999999999999 9999999999999 665432221 12222323334444444422 58
Q ss_pred cEEEEEeccCCc
Q 031524 145 KASINNLWNFNR 156 (158)
Q Consensus 145 ~I~viG~S~GG~ 156 (158)
++..+|||.|+-
T Consensus 105 ~~i~~gHSrGce 116 (297)
T PF06342_consen 105 KLIFLGHSRGCE 116 (297)
T ss_pred ceEEEEeccchH
Confidence 999999999974
No 105
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.17 E-value=1.3e-05 Score=67.02 Aligned_cols=92 Identities=13% Similarity=0.118 Sum_probs=65.6
Q ss_pred CceEEEEEEcC------CCCCEEEEEcccC---CC--ChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcC
Q 031524 53 DTTFDAYVVGK------EDAPGIVVVQEWW---GV--DFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSG 121 (158)
Q Consensus 53 ~~~l~~~~~~p------~~~p~VIllHg~~---G~--~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~ 121 (158)
.+.+...++.| .+.|.||++||.+ |. ...+..++.+++. +.+..|+.+|||-- + .
T Consensus 71 ~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~-~~~~vvvSVdYRLA--P-----------E 136 (336)
T KOG1515|consen 71 FTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAA-ELNCVVVSVDYRLA--P-----------E 136 (336)
T ss_pred CCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHH-HcCeEEEecCcccC--C-----------C
Confidence 34677777776 2469999999742 32 3456678888843 67999999999841 1 1
Q ss_pred CChhhHHHHHHHHHHHHHhC-------CCCcEEEEEeccCCccC
Q 031524 122 LDWPGAVKDIHASVNWLKAN-------GSKKASINNLWNFNRLA 158 (158)
Q Consensus 122 ~~~~~~~~di~~av~~l~~~-------~~~~I~viG~S~GG~lA 158 (158)
...+...+|...|+.|+.++ +.++|.|+|=|.||.+|
T Consensus 137 h~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia 180 (336)
T KOG1515|consen 137 HPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIA 180 (336)
T ss_pred CCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHH
Confidence 23445567777888887654 47899999999999875
No 106
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.15 E-value=4.4e-06 Score=73.73 Aligned_cols=105 Identities=10% Similarity=0.043 Sum_probs=75.9
Q ss_pred CCceeEEEeeCCc-eEEEEEEcCC---CCCEEEEEc--ccCC---CChHHHHHHH---HHhhcCCCcEEEeeecCC-CCC
Q 031524 42 SPFKKIQIQRDDT-TFDAYVVGKE---DAPGIVVVQ--EWWG---VDFEIKNHAV---KISQLNPGFKALIPDLYR-GKV 108 (158)
Q Consensus 42 ~~~~~i~i~~~~~-~l~~~~~~p~---~~p~VIllH--g~~G---~~~~~~~~A~---~La~l~~Gy~V~~~D~~g-G~~ 108 (158)
...+.+.++-.|| +|.+-++.|+ +.|+++..+ -..- .......... +++ .+||.|+..|.|| +.|
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~a--a~GYavV~qDvRG~~~S 94 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFA--AQGYAVVNQDVRGRGGS 94 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceee--cCceEEEEecccccccC
Confidence 3346678888776 9999999984 578998888 2211 1222333444 688 9999999999999 777
Q ss_pred CCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC--CCcEEEEEeccCCc
Q 031524 109 GLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG--SKKASINNLWNFNR 156 (158)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~--~~~I~viG~S~GG~ 156 (158)
++..+.- ..+..+|--..|+|+.+++ .++|+.+|.|++|.
T Consensus 95 eG~~~~~--------~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~ 136 (563)
T COG2936 95 EGVFDPE--------SSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGF 136 (563)
T ss_pred Cccccee--------ccccccchhHHHHHHHhCCccCCeeeeecccHHHH
Confidence 6543211 1124578888999999997 79999999999985
No 107
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.13 E-value=5.1e-06 Score=64.20 Aligned_cols=80 Identities=5% Similarity=-0.154 Sum_probs=54.9
Q ss_pred CEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCCcE
Q 031524 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSKKA 146 (158)
Q Consensus 67 p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~I 146 (158)
+.|+++|+..|....+..+++.|. ..++.|+.+++.+-... .+ ...+.++.+++..+.+... ++.+++
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~--~~~~~v~~i~~~~~~~~-~~-------~~~si~~la~~y~~~I~~~--~~~gp~ 68 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALP--DDVIGVYGIEYPGRGDD-EP-------PPDSIEELASRYAEAIRAR--QPEGPY 68 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHT--TTEEEEEEECSTTSCTT-SH-------EESSHHHHHHHHHHHHHHH--TSSSSE
T ss_pred CeEEEEcCCccCHHHHHHHHHhCC--CCeEEEEEEecCCCCCC-CC-------CCCCHHHHHHHHHHHhhhh--CCCCCe
Confidence 368999999998889999999998 54799999998872211 11 1124445544443333322 234599
Q ss_pred EEEEeccCCccC
Q 031524 147 SINNLWNFNRLA 158 (158)
Q Consensus 147 ~viG~S~GG~lA 158 (158)
.++|||+||.+|
T Consensus 69 ~L~G~S~Gg~lA 80 (229)
T PF00975_consen 69 VLAGWSFGGILA 80 (229)
T ss_dssp EEEEETHHHHHH
T ss_pred eehccCccHHHH
Confidence 999999999875
No 108
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.10 E-value=1.3e-05 Score=73.58 Aligned_cols=111 Identities=23% Similarity=0.091 Sum_probs=71.6
Q ss_pred CceeEEEeeCCceEEEEEEcC------CCCCEEEEEcccCCCC----hHHHHHHHH-HhhcCCCcEEEeeecCC-CCCCC
Q 031524 43 PFKKIQIQRDDTTFDAYVVGK------EDAPGIVVVQEWWGVD----FEIKNHAVK-ISQLNPGFKALIPDLYR-GKVGL 110 (158)
Q Consensus 43 ~~~~i~i~~~~~~l~~~~~~p------~~~p~VIllHg~~G~~----~~~~~~A~~-La~l~~Gy~V~~~D~~g-G~~~~ 110 (158)
+.+..++.-+|......+..| ++.|.++..||..+.. .....+... +. ..|+.|+.+|+|| |..+.
T Consensus 497 ~~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s--~~g~~v~~vd~RGs~~~G~ 574 (755)
T KOG2100|consen 497 IVEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVS--SRGFAVLQVDGRGSGGYGW 574 (755)
T ss_pred cceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhc--cCCeEEEEEcCCCcCCcch
Confidence 334444444555777777777 2479999999877632 222234444 55 8999999999998 44332
Q ss_pred CHHHHHHHHcCCChhhHHHHHHHHHHHHHhC---CCCcEEEEEeccCCccC
Q 031524 111 DTAEAQHLMSGLDWPGAVKDIHASVNWLKAN---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~di~~av~~l~~~---~~~~I~viG~S~GG~lA 158 (158)
+... .+..+... ..++|+..+++++.++ +.+||+|+|||.||.++
T Consensus 575 ~~~~--~~~~~lG~-~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t 622 (755)
T KOG2100|consen 575 DFRS--ALPRNLGD-VEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLT 622 (755)
T ss_pred hHHH--HhhhhcCC-cchHHHHHHHHHHHhcccccHHHeEEeccChHHHHH
Confidence 2211 11222211 2368888888888776 37899999999999863
No 109
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.09 E-value=9.1e-06 Score=64.26 Aligned_cols=89 Identities=19% Similarity=0.175 Sum_probs=54.7
Q ss_pred CCCEEEEEcccCCCChHHHHH--HHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCC--hhhHHHHHHHHHHHHH
Q 031524 65 DAPGIVVVQEWWGVDFEIKNH--AVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLD--WPGAVKDIHASVNWLK 139 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~--A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~--~~~~~~di~~av~~l~ 139 (158)
+.|.||++||..+..+.+... ...|++ ++||.|+.|+-.. ..... ..++....+ -......|...++++.
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd-~~GfivvyP~~~~~~~~~~----cw~w~~~~~~~g~~d~~~i~~lv~~v~ 89 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALAD-REGFIVVYPEQSRRANPQG----CWNWFSDDQQRGGGDVAFIAALVDYVA 89 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhh-cCCeEEEcccccccCCCCC----cccccccccccCccchhhHHHHHHhHh
Confidence 468999999998876554331 234554 7899999997432 11110 011111000 0112345677788887
Q ss_pred hC---CCCcEEEEEeccCCccC
Q 031524 140 AN---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 140 ~~---~~~~I~viG~S~GG~lA 158 (158)
++ +.+||.+.|+|.||.++
T Consensus 90 ~~~~iD~~RVyv~G~S~Gg~ma 111 (220)
T PF10503_consen 90 ARYNIDPSRVYVTGLSNGGMMA 111 (220)
T ss_pred hhcccCCCceeeEEECHHHHHH
Confidence 66 47899999999999764
No 110
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.06 E-value=1.5e-05 Score=70.97 Aligned_cols=116 Identities=18% Similarity=0.241 Sum_probs=79.6
Q ss_pred CCCCceeEEEeeCCc-eEEEEEEcC------CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCC-CCCC
Q 031524 40 AASPFKKIQIQRDDT-TFDAYVVGK------EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGK-VGLD 111 (158)
Q Consensus 40 ~~~~~~~i~i~~~~~-~l~~~~~~p------~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~-~~~~ 111 (158)
+....+.+.+++.|| .++-+++.- ++.|.+|+.+|.+|..-....-+.++..|+.|+.....|.|||. -+..
T Consensus 437 s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~ 516 (712)
T KOG2237|consen 437 SDYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQ 516 (712)
T ss_pred cceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccc
Confidence 345667788888876 666555542 36899999999887653333334444444899999999999843 3333
Q ss_pred HHHHHHHHcCCChhhHHHHHHHHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 112 TAEAQHLMSGLDWPGAVKDIHASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~di~~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
..+.-.+. ......+|..++.+||.+++ +.++++.|+|.||.++
T Consensus 517 WHk~G~la---kKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLv 563 (712)
T KOG2237|consen 517 WHKDGRLA---KKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLV 563 (712)
T ss_pred hhhccchh---hhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchh
Confidence 32221121 22345789999999998885 7899999999999864
No 111
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.05 E-value=2.8e-05 Score=67.26 Aligned_cols=94 Identities=12% Similarity=0.117 Sum_probs=57.6
Q ss_pred eEEEEEEcC----CCCCEEEEEccc---CCCChHHHHHHHHHhhcCC-CcEEEeeecC-C--CCCCCCHHHHHHHHcCCC
Q 031524 55 TFDAYVVGK----EDAPGIVVVQEW---WGVDFEIKNHAVKISQLNP-GFKALIPDLY-R--GKVGLDTAEAQHLMSGLD 123 (158)
Q Consensus 55 ~l~~~~~~p----~~~p~VIllHg~---~G~~~~~~~~A~~La~l~~-Gy~V~~~D~~-g--G~~~~~~~~~~~~~~~~~ 123 (158)
.+..|.... ++.|+||++||- .|..... ....|+. +. |+.|+.++|| | |.-.... ....
T Consensus 80 ~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~-~~~~~~vv~~~yRlg~~g~~~~~~-------~~~~ 149 (493)
T cd00312 80 YLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY--PGDGLAR-EGDNVIVVSINYRLGVLGFLSTGD-------IELP 149 (493)
T ss_pred eEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC--ChHHHHh-cCCCEEEEEecccccccccccCCC-------CCCC
Confidence 555555431 346999999983 2333221 2334441 23 3999999999 4 3211100 0111
Q ss_pred hhhHHHHHHHHHHHHHhC------CCCcEEEEEeccCCccC
Q 031524 124 WPGAVKDIHASVNWLKAN------GSKKASINNLWNFNRLA 158 (158)
Q Consensus 124 ~~~~~~di~~av~~l~~~------~~~~I~viG~S~GG~lA 158 (158)
-.....|+..+++|++++ ++++|.|+|+|.||.++
T Consensus 150 ~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~ 190 (493)
T cd00312 150 GNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASV 190 (493)
T ss_pred cchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHh
Confidence 112468999999999876 37899999999999753
No 112
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.01 E-value=1.8e-05 Score=67.63 Aligned_cols=120 Identities=8% Similarity=0.130 Sum_probs=83.0
Q ss_pred cccccCCCCceeEEEeeCCceEEEEEEcC---CCCCEEEEEcccCCCChH------HHHHHHHHhhcCCCcEEEeeecCC
Q 031524 35 SMADSAASPFKKIQIQRDDTTFDAYVVGK---EDAPGIVVVQEWWGVDFE------IKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 35 ~~~~~~~~~~~~i~i~~~~~~l~~~~~~p---~~~p~VIllHg~~G~~~~------~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
.+.+....+.|+..++++||-+-...--| +++|+|++.||....... -..+|-.|+ ++||+|-.=+.||
T Consensus 39 ~~i~~~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~La--daGYDVWLgN~RG 116 (403)
T KOG2624|consen 39 EIIEKYGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLA--DAGYDVWLGNNRG 116 (403)
T ss_pred HHHHHcCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHH--HcCCceeeecCcC
Confidence 34555678889999999998444443333 568999999998655432 246888999 9999999999998
Q ss_pred -CCCCC----CHHHHHHHHcCCChhh-HHHHHHHHHHHHHhC-CCCcEEEEEeccCCcc
Q 031524 106 -GKVGL----DTAEAQHLMSGLDWPG-AVKDIHASVNWLKAN-GSKKASINNLWNFNRL 157 (158)
Q Consensus 106 -G~~~~----~~~~~~~~~~~~~~~~-~~~di~~av~~l~~~-~~~~I~viG~S~GG~l 157 (158)
.++-. ++... .......|.+ ..-|+-+.++++-+. +.+++..+|||.|...
T Consensus 117 n~ySr~h~~l~~~~~-~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~ 174 (403)
T KOG2624|consen 117 NTYSRKHKKLSPSSD-KEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTT 174 (403)
T ss_pred cccchhhcccCCcCC-cceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchh
Confidence 33211 11000 0122345555 567899999998554 4789999999999864
No 113
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.92 E-value=4.5e-05 Score=56.76 Aligned_cols=79 Identities=18% Similarity=0.262 Sum_probs=48.7
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHhhc-CCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCC
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGS 143 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La~l-~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~ 143 (158)
.|.|+++||+.+....+......+... .. |.|+.+|++| |.+. .. ........+++...++.+ +.
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~-~~--------~~~~~~~~~~~~~~~~~~---~~ 87 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSD-PA--------GYSLSAYADDLAALLDAL---GL 87 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccc-eEEEEecccCCCCCC-cc--------cccHHHHHHHHHHHHHHh---CC
Confidence 459999999988766555532233200 23 9999999997 6553 00 011112245555555543 33
Q ss_pred CcEEEEEeccCCcc
Q 031524 144 KKASINNLWNFNRL 157 (158)
Q Consensus 144 ~~I~viG~S~GG~l 157 (158)
.++.++|||+||.+
T Consensus 88 ~~~~l~G~S~Gg~~ 101 (282)
T COG0596 88 EKVVLVGHSMGGAV 101 (282)
T ss_pred CceEEEEecccHHH
Confidence 55999999999865
No 114
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.92 E-value=9.2e-06 Score=67.24 Aligned_cols=39 Identities=13% Similarity=0.107 Sum_probs=37.0
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
+.|.||+-||..|.+..+-.++-.|| .+||.|.+++.|+
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LA--ShG~VVaavEHRD 155 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLA--SHGFVVAAVEHRD 155 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHh--hCceEEEEeeccc
Confidence 57999999999999999999999999 9999999999997
No 115
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.90 E-value=9.6e-06 Score=61.39 Aligned_cols=57 Identities=21% Similarity=0.103 Sum_probs=34.4
Q ss_pred cEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 96 FKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 96 y~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
|+|+++|.|| |.+..... ............+++...++.+ +.+++.++||||||.++
T Consensus 1 f~vi~~d~rG~g~S~~~~~---~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~vG~S~Gg~~~ 58 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWD---PDFPDYTTDDLAADLEALREAL---GIKKINLVGHSMGGMLA 58 (230)
T ss_dssp EEEEEEECTTSTTSSSCCG---SGSCTHCHHHHHHHHHHHHHHH---TTSSEEEEEETHHHHHH
T ss_pred CEEEEEeCCCCCCCCCCcc---CCcccccHHHHHHHHHHHHHHh---CCCCeEEEEECCChHHH
Confidence 7899999999 76642100 0011223334445555444443 45679999999999763
No 116
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.84 E-value=9.8e-05 Score=58.65 Aligned_cols=86 Identities=15% Similarity=-0.011 Sum_probs=52.4
Q ss_pred CCCEEEEEcccCCCCh-HHHHHHHHHhhcCCCc--EEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC
Q 031524 65 DAPGIVVVQEWWGVDF-EIKNHAVKISQLNPGF--KALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN 141 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~-~~~~~A~~La~l~~Gy--~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~ 141 (158)
+..++|++||+.-..+ .....|+-.. ..|| .++++.++.+.....+.. .+..-.....++...++.|.+.
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~--~~~~~~~~i~FsWPS~g~~~~Y~~-----d~~~a~~s~~~l~~~L~~L~~~ 89 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAH--DLGFPGVVILFSWPSDGSLLGYFY-----DRESARFSGPALARFLRDLARA 89 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHH--HhCCCceEEEEEcCCCCChhhhhh-----hhhhHHHHHHHHHHHHHHHHhc
Confidence 4679999999865543 3455555444 3344 788888876322111110 1111122345566677777666
Q ss_pred -CCCcEEEEEeccCCcc
Q 031524 142 -GSKKASINNLWNFNRL 157 (158)
Q Consensus 142 -~~~~I~viG~S~GG~l 157 (158)
+.++|.|++||||+.+
T Consensus 90 ~~~~~I~ilaHSMG~rv 106 (233)
T PF05990_consen 90 PGIKRIHILAHSMGNRV 106 (233)
T ss_pred cCCceEEEEEeCchHHH
Confidence 5789999999999875
No 117
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.76 E-value=8.9e-05 Score=62.14 Aligned_cols=92 Identities=15% Similarity=0.130 Sum_probs=60.1
Q ss_pred CCCEEEEEcccCCCChHHH--HHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCCh----hhHHHHHHHHHHH
Q 031524 65 DAPGIVVVQEWWGVDFEIK--NHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDW----PGAVKDIHASVNW 137 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~--~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~----~~~~~di~~av~~ 137 (158)
.+|++|.+.|.+......+ .+|..|. ++|+..+.+...- |..-...+....+..-.|. .+.+.++...++|
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl--~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLL--KEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHH--HcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 3789999998766543322 3499998 8999999987542 3321011111011000011 2456778888999
Q ss_pred HHhCCCCcEEEEEeccCCccC
Q 031524 138 LKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 138 l~~~~~~~I~viG~S~GG~lA 158 (158)
+.+++..++++.|.||||.+|
T Consensus 169 l~~~G~~~~g~~G~SmGG~~A 189 (348)
T PF09752_consen 169 LEREGYGPLGLTGISMGGHMA 189 (348)
T ss_pred HHhcCCCceEEEEechhHhhH
Confidence 999888899999999999875
No 118
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.73 E-value=4.6e-05 Score=59.73 Aligned_cols=25 Identities=16% Similarity=0.341 Sum_probs=21.1
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHh
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKIS 90 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La 90 (158)
.-.||++||+.|....+..+...+.
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~ 28 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLE 28 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 4579999999999888888877776
No 119
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.71 E-value=5.7e-05 Score=69.45 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=49.1
Q ss_pred HHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC---------------C--CCc
Q 031524 84 NHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN---------------G--SKK 145 (158)
Q Consensus 84 ~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~---------------~--~~~ 145 (158)
.+.++|+ .+||.|+..|.|| |.|++.. ...+ ....+|..++|+|+..+ + .++
T Consensus 270 ~~~~~~~--~rGYaVV~~D~RGtg~SeG~~-------~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGk 339 (767)
T PRK05371 270 SLNDYFL--PRGFAVVYVSGIGTRGSDGCP-------TTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGK 339 (767)
T ss_pred hHHHHHH--hCCeEEEEEcCCCCCCCCCcC-------ccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCe
Confidence 5678899 9999999999999 6665532 1111 34568999999999843 2 579
Q ss_pred EEEEEeccCCcc
Q 031524 146 ASINNLWNFNRL 157 (158)
Q Consensus 146 I~viG~S~GG~l 157 (158)
|+++|.|+||.+
T Consensus 340 VGm~G~SY~G~~ 351 (767)
T PRK05371 340 VAMTGKSYLGTL 351 (767)
T ss_pred eEEEEEcHHHHH
Confidence 999999999965
No 120
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.66 E-value=0.0001 Score=64.03 Aligned_cols=97 Identities=10% Similarity=0.073 Sum_probs=60.0
Q ss_pred eEEEEEEc-C-CCCCEEEEEcccC---CCChHHHHHHHHHhhcCCC-cEEEeeecC-C--CCCC-CCHHHHHHHHcCCCh
Q 031524 55 TFDAYVVG-K-EDAPGIVVVQEWW---GVDFEIKNHAVKISQLNPG-FKALIPDLY-R--GKVG-LDTAEAQHLMSGLDW 124 (158)
Q Consensus 55 ~l~~~~~~-p-~~~p~VIllHg~~---G~~~~~~~~A~~La~l~~G-y~V~~~D~~-g--G~~~-~~~~~~~~~~~~~~~ 124 (158)
.|..|... + ++.|++|+|||-. |....-.--...|+ ++| +.|+.+||| | |.-. ...+... ...+.
T Consensus 81 ~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La--~~g~vVvVSvNYRLG~lGfL~~~~~~~~~---~~~~n 155 (491)
T COG2272 81 YLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALA--ARGDVVVVSVNYRLGALGFLDLSSLDTED---AFASN 155 (491)
T ss_pred eEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHH--hcCCEEEEEeCcccccceeeehhhccccc---ccccc
Confidence 55555543 3 3469999999732 33322222244777 788 999999999 3 3211 0000000 00111
Q ss_pred hhHHHHHHHHHHHHHhC------CCCcEEEEEeccCCcc
Q 031524 125 PGAVKDIHASVNWLKAN------GSKKASINNLWNFNRL 157 (158)
Q Consensus 125 ~~~~~di~~av~~l~~~------~~~~I~viG~S~GG~l 157 (158)
-.+.|+..+++|++++ +++.|-|+|.|.|+..
T Consensus 156 -~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~s 193 (491)
T COG2272 156 -LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAAS 193 (491)
T ss_pred -ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHH
Confidence 2468889999999887 3789999999999864
No 121
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.65 E-value=0.00012 Score=59.29 Aligned_cols=92 Identities=13% Similarity=-0.033 Sum_probs=58.8
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHhh-cCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC--
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKISQ-LNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN-- 141 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La~-l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~-- 141 (158)
...+++++|..|.-+++..+.+.|.+ |...|.|++..+.| .......... .....++.++.++-....++.+...
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~-~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFS-PNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccccccc-CCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 35789999999999999998888873 34689999999877 2221110000 0012234444444444444444332
Q ss_pred -CCCcEEEEEeccCCccC
Q 031524 142 -GSKKASINNLWNFNRLA 158 (158)
Q Consensus 142 -~~~~I~viG~S~GG~lA 158 (158)
+..++.++|||.|++++
T Consensus 81 ~~~~~liLiGHSIGayi~ 98 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIA 98 (266)
T ss_pred CCCCcEEEEeCcHHHHHH
Confidence 36789999999999864
No 122
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.63 E-value=0.0002 Score=57.92 Aligned_cols=77 Identities=8% Similarity=-0.098 Sum_probs=54.2
Q ss_pred CEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHh-CCCC
Q 031524 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKA-NGSK 144 (158)
Q Consensus 67 p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~-~~~~ 144 (158)
|.+.++|+..|....+..++..|. .. ..|+..+.++ +.... .-.++++.++. -++.+++ +|.+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~--~~-~~v~~l~a~g~~~~~~---------~~~~l~~~a~~---yv~~Ir~~QP~G 65 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALG--PL-LPVYGLQAPGYGAGEQ---------PFASLDDMAAA---YVAAIRRVQPEG 65 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhc--cC-ceeeccccCccccccc---------ccCCHHHHHHH---HHHHHHHhCCCC
Confidence 568899999999999999999998 55 8899988876 32110 01133333333 3444443 4678
Q ss_pred cEEEEEeccCCccC
Q 031524 145 KASINNLWNFNRLA 158 (158)
Q Consensus 145 ~I~viG~S~GG~lA 158 (158)
++.++|||+||.+|
T Consensus 66 Py~L~G~S~GG~vA 79 (257)
T COG3319 66 PYVLLGWSLGGAVA 79 (257)
T ss_pred CEEEEeeccccHHH
Confidence 99999999999875
No 123
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=97.63 E-value=0.00067 Score=56.02 Aligned_cols=80 Identities=13% Similarity=0.115 Sum_probs=51.8
Q ss_pred CCCEEEEEcccCCC---ChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC
Q 031524 65 DAPGIVVVQEWWGV---DFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN 141 (158)
Q Consensus 65 ~~p~VIllHg~~G~---~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~ 141 (158)
+..+||+|.|.... .+++..+|+.|. ..||.++.+.+...+.+.. ....+.=++||..+++||+..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~--~~~wsl~q~~LsSSy~G~G---------~~SL~~D~~eI~~~v~ylr~~ 100 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALE--ETGWSLFQVQLSSSYSGWG---------TSSLDRDVEEIAQLVEYLRSE 100 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT---TT-EEEEE--GGGBTTS----------S--HHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhc--cCCeEEEEEEecCccCCcC---------cchhhhHHHHHHHHHHHHHHh
Confidence 45689999987542 478899999998 8999999999875222210 113344468999999999886
Q ss_pred -----CCCcEEEEEeccCC
Q 031524 142 -----GSKKASINNLWNFN 155 (158)
Q Consensus 142 -----~~~~I~viG~S~GG 155 (158)
..++|.++|||-|.
T Consensus 101 ~~g~~~~~kIVLmGHSTGc 119 (303)
T PF08538_consen 101 KGGHFGREKIVLMGHSTGC 119 (303)
T ss_dssp S------S-EEEEEECCHH
T ss_pred hccccCCccEEEEecCCCc
Confidence 36799999999874
No 124
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.54 E-value=0.00071 Score=55.98 Aligned_cols=112 Identities=12% Similarity=0.049 Sum_probs=74.2
Q ss_pred ceeEEEeeCCceEEEEEEcC---CCCCEEEEEcccCCCC---hHHHHHHHHHhhcCCCcEEEeeecCC--CC-CCC----
Q 031524 44 FKKIQIQRDDTTFDAYVVGK---EDAPGIVVVQEWWGVD---FEIKNHAVKISQLNPGFKALIPDLYR--GK-VGL---- 110 (158)
Q Consensus 44 ~~~i~i~~~~~~l~~~~~~p---~~~p~VIllHg~~G~~---~~~~~~A~~La~l~~Gy~V~~~D~~g--G~-~~~---- 110 (158)
.+.+.++.++..+.+.+... ....+||++||+..+. ..+..+.+.|. +.||.++.+.+.. +. .+.
T Consensus 62 ~e~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~--~~GW~Tlsit~P~~~~~~~p~~~~~ 139 (310)
T PF12048_consen 62 DEVQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELP--DHGWATLSITLPDPAPPASPNRATE 139 (310)
T ss_pred hhcEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhh--hcCceEEEecCCCcccccCCccCCC
Confidence 45567777666666655443 2357999999987764 45677889999 9999999988876 11 000
Q ss_pred --------CHH---HHH---------HHHcCCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCcc
Q 031524 111 --------DTA---EAQ---------HLMSGLDWPGAVKDIHASVNWLKANGSKKASINNLWNFNRL 157 (158)
Q Consensus 111 --------~~~---~~~---------~~~~~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~l 157 (158)
+.+ +.. ..........+...|.+++.++++++.++|.||||..|+.+
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~ 206 (310)
T PF12048_consen 140 AEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGW 206 (310)
T ss_pred CCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHH
Confidence 000 000 00000112356778999999999987677999999999865
No 125
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.51 E-value=5.6e-05 Score=64.38 Aligned_cols=90 Identities=9% Similarity=0.011 Sum_probs=51.3
Q ss_pred CCCCEEEEEcccCCCChH-------------HHHH---HHHHhhcCCCcEEEeeecCC-CCC--C----C-----CHHHH
Q 031524 64 EDAPGIVVVQEWWGVDFE-------------IKNH---AVKISQLNPGFKALIPDLYR-GKV--G----L-----DTAEA 115 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~-------------~~~~---A~~La~l~~Gy~V~~~D~~g-G~~--~----~-----~~~~~ 115 (158)
.+.++||++|++.|.... +..+ .+.|- -.-|-|+++|..| +.+ + . ++...
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lD--t~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg 131 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAID--TNKYFVISTDTLCNVQVKDPNVITTGPASINPKTG 131 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcC--CCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCC
Confidence 457999999999884321 1111 11222 3469999999998 331 0 0 11111
Q ss_pred HHH---HcCCChhhHHHHHHHHHHHHHhCCCCcEE-EEEeccCCccC
Q 031524 116 QHL---MSGLDWPGAVKDIHASVNWLKANGSKKAS-INNLWNFNRLA 158 (158)
Q Consensus 116 ~~~---~~~~~~~~~~~di~~av~~l~~~~~~~I~-viG~S~GG~lA 158 (158)
..+ ...++....++++...++.+ +-+++. ++||||||.+|
T Consensus 132 ~~~~~~fP~~t~~d~~~~~~~ll~~l---gi~~~~~vvG~SmGG~ia 175 (389)
T PRK06765 132 KPYGMDFPVVTILDFVRVQKELIKSL---GIARLHAVMGPSMGGMQA 175 (389)
T ss_pred CccCCCCCcCcHHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHH
Confidence 001 12234555566665555544 456775 99999999864
No 126
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.51 E-value=0.0003 Score=67.02 Aligned_cols=80 Identities=10% Similarity=-0.014 Sum_probs=57.9
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCC
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGS 143 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~ 143 (158)
..+.++++||+.|....+..+++.|. .++.|++++++| +.... ...+.+...+++.+.++.+. +.
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~---~~~~v~~~~~~g~~~~~~---------~~~~l~~la~~~~~~i~~~~--~~ 1132 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLD---PQWSIYGIQSPRPDGPMQ---------TATSLDEVCEAHLATLLEQQ--PH 1132 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcC---CCCcEEEEECCCCCCCCC---------CCCCHHHHHHHHHHHHHhhC--CC
Confidence 34679999999998888888998886 579999999987 32211 11355566666665555432 34
Q ss_pred CcEEEEEeccCCccC
Q 031524 144 KKASINNLWNFNRLA 158 (158)
Q Consensus 144 ~~I~viG~S~GG~lA 158 (158)
+++.++||||||.+|
T Consensus 1133 ~p~~l~G~S~Gg~vA 1147 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLA 1147 (1296)
T ss_pred CCEEEEEechhhHHH
Confidence 689999999999764
No 127
>COG0400 Predicted esterase [General function prediction only]
Probab=97.50 E-value=0.00016 Score=56.64 Aligned_cols=88 Identities=11% Similarity=0.090 Sum_probs=48.6
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHH--HcCCChhhHHHHHHHHHHHHH---h
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHL--MSGLDWPGAVKDIHASVNWLK---A 140 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~--~~~~~~~~~~~di~~av~~l~---~ 140 (158)
.|.||++||++|....+..+...+. -.+.++.| +|.........-..+ ....|.+....+.....+++. +
T Consensus 18 ~~~iilLHG~Ggde~~~~~~~~~~~---P~~~~is~--rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 18 APLLILLHGLGGDELDLVPLPELIL---PNATLVSP--RGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CcEEEEEecCCCChhhhhhhhhhcC---CCCeEEcC--CCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 5789999999987777777766665 45777665 442110000000000 011233333333333333332 2
Q ss_pred C---CCCcEEEEEeccCCccC
Q 031524 141 N---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 141 ~---~~~~I~viG~S~GG~lA 158 (158)
+ +.+++.++|||.|+.++
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ia 113 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIA 113 (207)
T ss_pred HhCCChhheEEEecChHHHHH
Confidence 2 36899999999999864
No 128
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.46 E-value=8.3e-05 Score=57.68 Aligned_cols=86 Identities=9% Similarity=0.076 Sum_probs=42.3
Q ss_pred CCCEEEEEcccCCCChHHHHHHH-HHhhcCCCcEEEeeecCC-------CCCCCCHHHHHHHHc--CC------Chh---
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAV-KISQLNPGFKALIPDLYR-------GKVGLDTAEAQHLMS--GL------DWP--- 125 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~-~La~l~~Gy~V~~~D~~g-------G~~~~~~~~~~~~~~--~~------~~~--- 125 (158)
..+.||++||+++....+..... .+. .....++.|+-.. |... ..++. .. +.+
T Consensus 13 ~~~lvi~LHG~G~~~~~~~~~~~~~~~--~~~~~~i~p~ap~~~~~~~~g~~~------~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDLFALLAELNLA--LPNTRFISPRAPSRPVTVPGGYRM------PAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp -SEEEEEE--TTS-HHHHHHHHHHHTC--STTEEEEEE---EEE-GGGTT-EE------E-SS-BSCSSSSSEB-HHHHH
T ss_pred CceEEEEECCCCCCcchhHHHHhhccc--CCceEEEeccCCCCCcccccccCC------CceeeccCCCcchhhhHHHHH
Confidence 46899999998666655555555 334 4677777765431 1100 00100 00 111
Q ss_pred hHHHHHHHHHHHHHhC--CCCcEEEEEeccCCccC
Q 031524 126 GAVKDIHASVNWLKAN--GSKKASINNLWNFNRLA 158 (158)
Q Consensus 126 ~~~~di~~av~~l~~~--~~~~I~viG~S~GG~lA 158 (158)
...+.+...++...+. +.++|.+.|||.||.+|
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~a 119 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMA 119 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHH
Confidence 1223344444443333 36899999999999764
No 129
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.45 E-value=0.00019 Score=62.21 Aligned_cols=69 Identities=14% Similarity=0.115 Sum_probs=49.1
Q ss_pred CChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC-CCCcEEEEEeccCC
Q 031524 78 VDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN-GSKKASINNLWNFN 155 (158)
Q Consensus 78 ~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~-~~~~I~viG~S~GG 155 (158)
...++..+.+.|. +.||.+ ..|++| |+..... ...+...+++...++.+.+. +.++|.++||||||
T Consensus 106 ~~~~~~~li~~L~--~~GY~~-~~dL~g~gYDwR~~---------~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGG 173 (440)
T PLN02733 106 EVYYFHDMIEQLI--KWGYKE-GKTLFGFGYDFRQS---------NRLPETMDGLKKKLETVYKASGGKKVNIISHSMGG 173 (440)
T ss_pred hHHHHHHHHHHHH--HcCCcc-CCCcccCCCCcccc---------ccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhH
Confidence 3467888999999 999977 789998 6652210 01234456777777776544 46799999999999
Q ss_pred ccC
Q 031524 156 RLA 158 (158)
Q Consensus 156 ~lA 158 (158)
.++
T Consensus 174 lva 176 (440)
T PLN02733 174 LLV 176 (440)
T ss_pred HHH
Confidence 763
No 130
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=97.44 E-value=0.0003 Score=54.24 Aligned_cols=68 Identities=12% Similarity=0.012 Sum_probs=42.4
Q ss_pred EEEEcccCCCChH--HHHHHHHHhhcCCC--cEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCC
Q 031524 69 IVVVQEWWGVDFE--IKNHAVKISQLNPG--FKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSK 144 (158)
Q Consensus 69 VIllHg~~G~~~~--~~~~A~~La~l~~G--y~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~ 144 (158)
||++||+.+.... ...+.++++ +.| ..+.+||+.. ++....+.+...++.. ..+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~--~~~~~~~~~~p~l~~-----------------~p~~a~~~l~~~i~~~---~~~ 59 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFA--EHGPDIQYPCPDLPP-----------------FPEEAIAQLEQLIEEL---KPE 59 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHH--HhCCCceEECCCCCc-----------------CHHHHHHHHHHHHHhC---CCC
Confidence 7899999877543 345677777 655 5566766532 1222233344444333 334
Q ss_pred cEEEEEeccCCccC
Q 031524 145 KASINNLWNFNRLA 158 (158)
Q Consensus 145 ~I~viG~S~GG~lA 158 (158)
.+.+||.||||.+|
T Consensus 60 ~~~liGSSlGG~~A 73 (187)
T PF05728_consen 60 NVVLIGSSLGGFYA 73 (187)
T ss_pred CeEEEEEChHHHHH
Confidence 59999999999864
No 131
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.44 E-value=6.7e-05 Score=64.76 Aligned_cols=98 Identities=12% Similarity=0.137 Sum_probs=57.4
Q ss_pred eCC-ceEEEEEEcC---C-CCCEEEEEccc---CCCC-hHHHHHHHHHhhcCCCcEEEeeecCC---CCC-CCCHHHHHH
Q 031524 51 RDD-TTFDAYVVGK---E-DAPGIVVVQEW---WGVD-FEIKNHAVKISQLNPGFKALIPDLYR---GKV-GLDTAEAQH 117 (158)
Q Consensus 51 ~~~-~~l~~~~~~p---~-~~p~VIllHg~---~G~~-~~~~~~A~~La~l~~Gy~V~~~D~~g---G~~-~~~~~~~~~ 117 (158)
++| -.|..|.... . +.|++|+|||- .|.. .........++ +.++.|+.++||= |.- ..+....
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~--~~~vivVt~nYRlg~~Gfl~~~~~~~~-- 180 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAA--SKDVIVVTINYRLGAFGFLSLGDLDAP-- 180 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHH--HHTSEEEEE----HHHHH-BSSSTTSH--
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCccccccccccccc--CCCEEEEEecccccccccccccccccC--
Confidence 445 2666666542 1 46999999973 2333 13334455567 7899999999993 321 1110000
Q ss_pred HHcCCChhhHHHHHHHHHHHHHhC------CCCcEEEEEeccCCcc
Q 031524 118 LMSGLDWPGAVKDIHASVNWLKAN------GSKKASINNLWNFNRL 157 (158)
Q Consensus 118 ~~~~~~~~~~~~di~~av~~l~~~------~~~~I~viG~S~GG~l 157 (158)
..+ ..+.|...|++|++++ ++++|-|+|+|.||..
T Consensus 181 ---~gN--~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~s 221 (535)
T PF00135_consen 181 ---SGN--YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAAS 221 (535)
T ss_dssp ---BST--HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHH
T ss_pred ---chh--hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccc
Confidence 011 2468999999999887 2789999999999863
No 132
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.39 E-value=0.00074 Score=60.07 Aligned_cols=112 Identities=13% Similarity=0.132 Sum_probs=74.7
Q ss_pred CCCceeEEEeeCCc-eEEEEEEc-C---CCCCEEEEEcccCCCC--hHH-HHHHHHHhhcCCCcEEEeeecCCCCC-CCC
Q 031524 41 ASPFKKIQIQRDDT-TFDAYVVG-K---EDAPGIVVVQEWWGVD--FEI-KNHAVKISQLNPGFKALIPDLYRGKV-GLD 111 (158)
Q Consensus 41 ~~~~~~i~i~~~~~-~l~~~~~~-p---~~~p~VIllHg~~G~~--~~~-~~~A~~La~l~~Gy~V~~~D~~gG~~-~~~ 111 (158)
....++...++.|| .++=+++. . .+.|++|+-.|.+++. +.+ ...--+| ++|..-++.|+|||.- +..
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WL---erGg~~v~ANIRGGGEfGp~ 467 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWL---ERGGVFVLANIRGGGEFGPE 467 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHH---hcCCeEEEEecccCCccCHH
Confidence 44445666777776 78877774 2 3468887777665543 233 2332344 6888888899998432 223
Q ss_pred HHHHHHHHcCCChhhHHHHHHHHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 112 TAEAQHLMSGLDWPGAVKDIHASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~di~~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
.+++. .+.+.....+|..++.+.|.+++ ++++++.|-|.||.+.
T Consensus 468 WH~Aa---~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLv 514 (648)
T COG1505 468 WHQAG---MKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLV 514 (648)
T ss_pred HHHHH---hhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEE
Confidence 33321 22355567899999999998885 6899999999999863
No 133
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.23 E-value=0.0014 Score=58.83 Aligned_cols=111 Identities=17% Similarity=0.147 Sum_probs=75.4
Q ss_pred CCceeEEEeeCCc-eEEEEEEc------CCCCCEEEEEcccCCCC--hHHHHHHHHHhhcCCCcEEEeeecCCCC-CCCC
Q 031524 42 SPFKKIQIQRDDT-TFDAYVVG------KEDAPGIVVVQEWWGVD--FEIKNHAVKISQLNPGFKALIPDLYRGK-VGLD 111 (158)
Q Consensus 42 ~~~~~i~i~~~~~-~l~~~~~~------p~~~p~VIllHg~~G~~--~~~~~~A~~La~l~~Gy~V~~~D~~gG~-~~~~ 111 (158)
...+.+-.+..|| .++.-++. +++.|.+|.--|.+|.. ..+....-.|. ++||.-...+.|||. -+..
T Consensus 417 Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLl--DRGfiyAIAHVRGGgelG~~ 494 (682)
T COG1770 417 YVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLL--DRGFVYAIAHVRGGGELGRA 494 (682)
T ss_pred eEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeee--cCceEEEEEEeecccccChH
Confidence 3456666776655 77766653 24578999999998875 34444444555 999999999999853 3332
Q ss_pred HHHHHHHHcCCChhhHHHHHHHHHHHHHhCC---CCcEEEEEeccCCcc
Q 031524 112 TAEAQHLMSGLDWPGAVKDIHASVNWLKANG---SKKASINNLWNFNRL 157 (158)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~di~~av~~l~~~~---~~~I~viG~S~GG~l 157 (158)
.-+.-... +...-..|..++.++|.+.+ .++|+++|-|.||.+
T Consensus 495 WYe~GK~l---~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmL 540 (682)
T COG1770 495 WYEDGKLL---NKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGML 540 (682)
T ss_pred HHHhhhhh---hccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHH
Confidence 22221222 22334678888999998874 679999999999986
No 134
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.21 E-value=0.00073 Score=54.07 Aligned_cols=83 Identities=8% Similarity=-0.090 Sum_probs=57.1
Q ss_pred CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC
Q 031524 64 EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG 142 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~ 142 (158)
...+.++.+|=.+|....++.+..+|- .-+.++++.|+| +..-..+ --.|.+..++.+...+.. -..
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp---~~iel~avqlPGR~~r~~ep-------~~~di~~Lad~la~el~~--~~~ 72 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLP---ADIELLAVQLPGRGDRFGEP-------LLTDIESLADELANELLP--PLL 72 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCC---chhheeeecCCCcccccCCc-------ccccHHHHHHHHHHHhcc--ccC
Confidence 446788999977888889999998886 359999999998 4331111 012455555555555542 112
Q ss_pred CCcEEEEEeccCCccC
Q 031524 143 SKKASINNLWNFNRLA 158 (158)
Q Consensus 143 ~~~I~viG~S~GG~lA 158 (158)
.++.+++||||||.+|
T Consensus 73 d~P~alfGHSmGa~lA 88 (244)
T COG3208 73 DAPFALFGHSMGAMLA 88 (244)
T ss_pred CCCeeecccchhHHHH
Confidence 4689999999999875
No 135
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.18 E-value=0.00089 Score=56.47 Aligned_cols=91 Identities=14% Similarity=0.102 Sum_probs=51.6
Q ss_pred CCCCEEEEEcccCCCChHHH-------HHHHHHhhcCCC-------cEEEeeecCCCC---C-CC--CHHHHHHHHcCCC
Q 031524 64 EDAPGIVVVQEWWGVDFEIK-------NHAVKISQLNPG-------FKALIPDLYRGK---V-GL--DTAEAQHLMSGLD 123 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~~~-------~~A~~La~l~~G-------y~V~~~D~~gG~---~-~~--~~~~~~~~~~~~~ 123 (158)
.+.++|+++|++.|...... .+-+.|. ..| |-|+|+|..||- + +. +++ .+.+...+
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~li--GpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~-g~~yg~~F- 124 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLI--GPGKPIDTERFFVICTNVLGGCKGSTGPSSINPG-GKPYGSDF- 124 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhc--CCCCCCCccceEEEEecCCCCCCCCCCCCCcCCC-CCccccCC-
Confidence 45789999999988532211 1333444 444 999999999832 1 11 222 21121111
Q ss_pred hhhHHHHHHHHHHHHHh-CCCCcEE-EEEeccCCccC
Q 031524 124 WPGAVKDIHASVNWLKA-NGSKKAS-INNLWNFNRLA 158 (158)
Q Consensus 124 ~~~~~~di~~av~~l~~-~~~~~I~-viG~S~GG~lA 158 (158)
+.--++|+..+-+.|.+ .+-+++. |||-||||+.|
T Consensus 125 P~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqa 161 (368)
T COG2021 125 PVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQA 161 (368)
T ss_pred CcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHH
Confidence 11234555555555533 3556655 99999999753
No 136
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.15 E-value=0.0032 Score=53.87 Aligned_cols=78 Identities=14% Similarity=-0.011 Sum_probs=58.7
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC-CCC
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN-GSK 144 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~-~~~ 144 (158)
.-..|++.|=+|.+.--++++..|+ ++|+-|+-+|-.. ++...-++++...|+...+++-+.+ +.+
T Consensus 260 d~~av~~SGDGGWr~lDk~v~~~l~--~~gvpVvGvdsLR-----------YfW~~rtPe~~a~Dl~r~i~~y~~~w~~~ 326 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDKEVAEALQ--KQGVPVVGVDSLR-----------YFWSERTPEQIAADLSRLIRFYARRWGAK 326 (456)
T ss_pred ceEEEEEecCCchhhhhHHHHHHHH--HCCCceeeeehhh-----------hhhccCCHHHHHHHHHHHHHHHHHhhCcc
Confidence 3456667766665666678999999 9999999998532 1222236677789999999887664 678
Q ss_pred cEEEEEeccCCc
Q 031524 145 KASINNLWNFNR 156 (158)
Q Consensus 145 ~I~viG~S~GG~ 156 (158)
++.++|||+|+=
T Consensus 327 ~~~liGySfGAD 338 (456)
T COG3946 327 RVLLIGYSFGAD 338 (456)
T ss_pred eEEEEeecccch
Confidence 999999999974
No 137
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.11 E-value=0.0056 Score=52.58 Aligned_cols=103 Identities=9% Similarity=0.083 Sum_probs=56.1
Q ss_pred eeEEEeeC--CceEEEEEEcCC-----CCCEEEEEcccCC-CChHHHHHHHHHhhcCCC----cEEEeeecCCCC-CCCC
Q 031524 45 KKIQIQRD--DTTFDAYVVGKE-----DAPGIVVVQEWWG-VDFEIKNHAVKISQLNPG----FKALIPDLYRGK-VGLD 111 (158)
Q Consensus 45 ~~i~i~~~--~~~l~~~~~~p~-----~~p~VIllHg~~G-~~~~~~~~A~~La~l~~G----y~V~~~D~~gG~-~~~~ 111 (158)
+.+++.+. +.....|++.|. +.|+|+++||-.- .........+.|. ++| ..++++|..++. ...+
T Consensus 181 ~~~~~~S~~Lg~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li--~~g~i~P~ivV~id~~~~~~R~~e 258 (411)
T PRK10439 181 KEIIWKSERLGNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLT--HRGQLPPAVYLLIDAIDTTHRSQE 258 (411)
T ss_pred EEEEEEccccCCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHH--HcCCCCceEEEEECCCCccccccc
Confidence 55566664 236677777663 4689999998421 1223445666776 667 346777754321 1110
Q ss_pred HHHHHHHHcCCCh-hhHHHHHHHHHHHHHhC-----CCCcEEEEEeccCCccC
Q 031524 112 TAEAQHLMSGLDW-PGAVKDIHASVNWLKAN-----GSKKASINNLWNFNRLA 158 (158)
Q Consensus 112 ~~~~~~~~~~~~~-~~~~~di~~av~~l~~~-----~~~~I~viG~S~GG~lA 158 (158)
.. ...++ ..+.++ .+-++.++ +.++.+|.|+||||..|
T Consensus 259 l~------~~~~f~~~l~~e---LlP~I~~~y~~~~d~~~~~IaG~S~GGl~A 302 (411)
T PRK10439 259 LP------CNADFWLAVQQE---LLPQVRAIAPFSDDADRTVVAGQSFGGLAA 302 (411)
T ss_pred CC------chHHHHHHHHHH---HHHHHHHhCCCCCCccceEEEEEChHHHHH
Confidence 00 00011 112333 34444443 25789999999999754
No 138
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.06 E-value=0.0018 Score=49.32 Aligned_cols=89 Identities=12% Similarity=0.044 Sum_probs=54.1
Q ss_pred EEcC-CCCC-EEEEEcccCCCC--hHHHHHHHHHhhcCCCcEEEeeecCC-CC-CCC--CHHHHHHHHcCCChhhHHHHH
Q 031524 60 VVGK-EDAP-GIVVVQEWWGVD--FEIKNHAVKISQLNPGFKALIPDLYR-GK-VGL--DTAEAQHLMSGLDWPGAVKDI 131 (158)
Q Consensus 60 ~~~p-~~~p-~VIllHg~~G~~--~~~~~~A~~La~l~~Gy~V~~~D~~g-G~-~~~--~~~~~~~~~~~~~~~~~~~di 131 (158)
++.| ++.| +||+-||..+.. ..+...|..|+ .+||.|..++|.- -. ..+ .+... ....+.+ +.
T Consensus 6 ~~~pag~~~~tilLaHGAGasmdSt~m~~~a~~la--~~G~~vaRfefpYma~Rrtg~rkPp~~---~~t~~~~-~~--- 76 (213)
T COG3571 6 LFDPAGPAPVTILLAHGAGASMDSTSMTAVAAALA--RRGWLVARFEFPYMAARRTGRRKPPPG---SGTLNPE-YI--- 76 (213)
T ss_pred ccCCCCCCCEEEEEecCCCCCCCCHHHHHHHHHHH--hCceeEEEeecchhhhccccCCCCcCc---cccCCHH-HH---
Confidence 3444 3444 566779987764 56888999999 9999999999863 11 111 01000 0112222 11
Q ss_pred HHHHHHHHhC-CCCcEEEEEeccCCccC
Q 031524 132 HASVNWLKAN-GSKKASINNLWNFNRLA 158 (158)
Q Consensus 132 ~~av~~l~~~-~~~~I~viG~S~GG~lA 158 (158)
.++..++.. ..+++.+=|+||||.+|
T Consensus 77 -~~~aql~~~l~~gpLi~GGkSmGGR~a 103 (213)
T COG3571 77 -VAIAQLRAGLAEGPLIIGGKSMGGRVA 103 (213)
T ss_pred -HHHHHHHhcccCCceeeccccccchHH
Confidence 234445554 35789999999999864
No 139
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=97.01 E-value=0.0055 Score=48.38 Aligned_cols=84 Identities=13% Similarity=-0.011 Sum_probs=55.1
Q ss_pred CCEEEEEcccCCCCh-HH-HHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC
Q 031524 66 APGIVVVQEWWGVDF-EI-KNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG 142 (158)
Q Consensus 66 ~p~VIllHg~~G~~~-~~-~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~ 142 (158)
...|+++.|.-|... .+ ..+-..+- ..-+++++.|.+| |.+- |.+ .+...+-..+|.+.+++-+++..
T Consensus 42 ~~~iLlipGalGs~~tDf~pql~~l~k--~l~~TivawDPpGYG~Sr--PP~-----Rkf~~~ff~~Da~~avdLM~aLk 112 (277)
T KOG2984|consen 42 PNYILLIPGALGSYKTDFPPQLLSLFK--PLQVTIVAWDPPGYGTSR--PPE-----RKFEVQFFMKDAEYAVDLMEALK 112 (277)
T ss_pred CceeEecccccccccccCCHHHHhcCC--CCceEEEEECCCCCCCCC--CCc-----ccchHHHHHHhHHHHHHHHHHhC
Confidence 458999999877642 22 12222233 2339999999998 6541 111 11233345678888888887777
Q ss_pred CCcEEEEEeccCCccC
Q 031524 143 SKKASINNLWNFNRLA 158 (158)
Q Consensus 143 ~~~I~viG~S~GG~lA 158 (158)
-+++.|+|||=||..|
T Consensus 113 ~~~fsvlGWSdGgiTa 128 (277)
T KOG2984|consen 113 LEPFSVLGWSDGGITA 128 (277)
T ss_pred CCCeeEeeecCCCeEE
Confidence 7899999999999754
No 140
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.00 E-value=0.0022 Score=54.14 Aligned_cols=102 Identities=9% Similarity=-0.039 Sum_probs=62.8
Q ss_pred CCceeEEEeeCCc-eEEEEEEc--CC---C-CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHH
Q 031524 42 SPFKKIQIQRDDT-TFDAYVVG--KE---D-APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTA 113 (158)
Q Consensus 42 ~~~~~i~i~~~~~-~l~~~~~~--p~---~-~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~ 113 (158)
..++...+.+.|+ .+++.+.. |. . ...||.+-|..|.-+. .....=+ +.||.|+-++.+| +.+.+.|.
T Consensus 212 ~NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~tP~--~lgYsvLGwNhPGFagSTG~P~ 287 (517)
T KOG1553|consen 212 KNGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMNTPA--QLGYSVLGWNHPGFAGSTGLPY 287 (517)
T ss_pred CCCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeecChH--HhCceeeccCCCCccccCCCCC
Confidence 3456678888765 88887775 21 2 3456666665554321 2233334 6799999999998 54443221
Q ss_pred HHHHHHcCCChhhHHHHHHHHHHHHHhC-C--CCcEEEEEeccCCcc
Q 031524 114 EAQHLMSGLDWPGAVKDIHASVNWLKAN-G--SKKASINNLWNFNRL 157 (158)
Q Consensus 114 ~~~~~~~~~~~~~~~~di~~av~~l~~~-~--~~~I~viG~S~GG~l 157 (158)
+......++++++|..+. + .+.|.+.|||.||.-
T Consensus 288 ----------p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~ 324 (517)
T KOG1553|consen 288 ----------PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFP 324 (517)
T ss_pred ----------cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCch
Confidence 111223455677776543 2 678999999999964
No 141
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=96.94 E-value=0.0066 Score=52.17 Aligned_cols=77 Identities=13% Similarity=0.155 Sum_probs=52.9
Q ss_pred CEEEEEcccCCCCh-HHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCC
Q 031524 67 PGIVVVQEWWGVDF-EIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSK 144 (158)
Q Consensus 67 p~VIllHg~~G~~~-~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~ 144 (158)
|.||++.-+.|.-. ..+++.++|. + |+.|++.|+.. +..+. -...++.++.++-+..+++.+ +.+
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll--~-g~dVYl~DW~~p~~vp~-------~~~~f~ldDYi~~l~~~i~~~---G~~ 169 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALL--P-DHDVYITDWVNARMVPL-------SAGKFDLEDYIDYLIEFIRFL---GPD 169 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHh--C-CCcEEEEeCCCCCCCch-------hcCCCCHHHHHHHHHHHHHHh---CCC
Confidence 67888887765432 2467888888 7 99999999865 32211 013456777776666666665 344
Q ss_pred cEEEEEeccCCcc
Q 031524 145 KASINNLWNFNRL 157 (158)
Q Consensus 145 ~I~viG~S~GG~l 157 (158)
+.++|+|+||.+
T Consensus 170 -v~l~GvCqgG~~ 181 (406)
T TIGR01849 170 -IHVIAVCQPAVP 181 (406)
T ss_pred -CcEEEEchhhHH
Confidence 999999999975
No 142
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=96.91 E-value=0.001 Score=50.45 Aligned_cols=66 Identities=11% Similarity=0.040 Sum_probs=40.2
Q ss_pred EEEEcccCCCC-hH-HHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCCcE
Q 031524 69 IVVVQEWWGVD-FE-IKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSKKA 146 (158)
Q Consensus 69 VIllHg~~G~~-~~-~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~I 146 (158)
|+++||+.|.. .+ +..+.+.|. .. +.|-.+|+. . .+.+.|.+.+...+..+ .+.+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~--~~-~~V~~~~~~---~-------------P~~~~W~~~l~~~i~~~----~~~~ 57 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLE--NS-VRVEQPDWD---N-------------PDLDEWVQALDQAIDAI----DEPT 57 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHT--TS-EEEEEC--T---S---------------HHHHHHHHHHCCHC-----TTTE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCC--CC-eEEeccccC---C-------------CCHHHHHHHHHHHHhhc----CCCe
Confidence 68999998874 34 445788887 66 888888761 1 13344555555544433 4569
Q ss_pred EEEEeccCCcc
Q 031524 147 SINNLWNFNRL 157 (158)
Q Consensus 147 ~viG~S~GG~l 157 (158)
.+||||+|+..
T Consensus 58 ilVaHSLGc~~ 68 (171)
T PF06821_consen 58 ILVAHSLGCLT 68 (171)
T ss_dssp EEEEETHHHHH
T ss_pred EEEEeCHHHHH
Confidence 99999999753
No 143
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.90 E-value=0.0016 Score=53.29 Aligned_cols=56 Identities=20% Similarity=0.205 Sum_probs=31.2
Q ss_pred CCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHh-CC---CCcEEEEEeccCCcc
Q 031524 93 NPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKA-NG---SKKASINNLWNFNRL 157 (158)
Q Consensus 93 ~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~-~~---~~~I~viG~S~GG~l 157 (158)
++||.|+++||-| |.. ++........+-|...|.+.+.. .+ ..+|+++|||-||..
T Consensus 24 ~~GyaVv~pDY~Glg~~---------y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~A 84 (290)
T PF03583_consen 24 ARGYAVVAPDYEGLGTP---------YLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQA 84 (290)
T ss_pred HCCCEEEecCCCCCCCc---------ccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHH
Confidence 6899999999987 442 11111111122222222222222 11 468999999999864
No 144
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=96.89 E-value=0.0043 Score=49.05 Aligned_cols=88 Identities=11% Similarity=0.067 Sum_probs=56.2
Q ss_pred eEEEEEEcC-CCCCEEEEEcccC---CCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHH
Q 031524 55 TFDAYVVGK-EDAPGIVVVQEWW---GVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKD 130 (158)
Q Consensus 55 ~l~~~~~~p-~~~p~VIllHg~~---G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~d 130 (158)
.++.| .| ...+..|++||.+ |....-...+.-.. ++||+|..++|- ..+. ....++.+.+
T Consensus 57 ~VDIw--g~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~--~~gY~vasvgY~--l~~q----------~htL~qt~~~ 120 (270)
T KOG4627|consen 57 LVDIW--GSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAV--RRGYRVASVGYN--LCPQ----------VHTLEQTMTQ 120 (270)
T ss_pred EEEEe--cCCCCccEEEEEecchhhcCchhcccchhhhhh--hcCeEEEEeccC--cCcc----------cccHHHHHHH
Confidence 44444 34 3468999999832 33333445555555 899999999872 2211 1134455566
Q ss_pred HHHHHHHHHhC-C-CCcEEEEEeccCCccC
Q 031524 131 IHASVNWLKAN-G-SKKASINNLWNFNRLA 158 (158)
Q Consensus 131 i~~av~~l~~~-~-~~~I~viG~S~GG~lA 158 (158)
....++|+-+. + .++|-+-|||.|+.+|
T Consensus 121 ~~~gv~filk~~~n~k~l~~gGHSaGAHLa 150 (270)
T KOG4627|consen 121 FTHGVNFILKYTENTKVLTFGGHSAGAHLA 150 (270)
T ss_pred HHHHHHHHHHhcccceeEEEcccchHHHHH
Confidence 66777776443 2 5778899999999864
No 145
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=96.87 E-value=0.0016 Score=55.96 Aligned_cols=79 Identities=10% Similarity=0.151 Sum_probs=56.3
Q ss_pred CEEEEEcccCCCC-----hHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHH-HHHHHHHHHHH
Q 031524 67 PGIVVVQEWWGVD-----FEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAV-KDIHASVNWLK 139 (158)
Q Consensus 67 p~VIllHg~~G~~-----~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~-~di~~av~~l~ 139 (158)
+.++++|-+...- ..-..+.++|. ++|..|+++|.++ ..+ ....++++.+ +.+..+++.++
T Consensus 108 ~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~--~~g~~vfvIsw~nPd~~----------~~~~~~edYi~e~l~~aid~v~ 175 (445)
T COG3243 108 RPLLIVPPWINKFYILDLSPEKSLVRWLL--EQGLDVFVISWRNPDAS----------LAAKNLEDYILEGLSEAIDTVK 175 (445)
T ss_pred CceEeeccccCceeEEeCCCCccHHHHHH--HcCCceEEEeccCchHh----------hhhccHHHHHHHHHHHHHHHHH
Confidence 4677777654321 11246788888 9999999999875 221 1133666655 78888999888
Q ss_pred hC-CCCcEEEEEeccCCcc
Q 031524 140 AN-GSKKASINNLWNFNRL 157 (158)
Q Consensus 140 ~~-~~~~I~viG~S~GG~l 157 (158)
+. +.++|-++|||.||.+
T Consensus 176 ~itg~~~InliGyCvGGtl 194 (445)
T COG3243 176 DITGQKDINLIGYCVGGTL 194 (445)
T ss_pred HHhCccccceeeEecchHH
Confidence 76 3589999999999975
No 146
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.74 E-value=0.0042 Score=52.41 Aligned_cols=85 Identities=9% Similarity=-0.006 Sum_probs=52.4
Q ss_pred CCEEEEEcccCCC-ChHHHHHHHHHhhcCCCcEE--EeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC
Q 031524 66 APGIVVVQEWWGV-DFEIKNHAVKISQLNPGFKA--LIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG 142 (158)
Q Consensus 66 ~p~VIllHg~~G~-~~~~~~~A~~La~l~~Gy~V--~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~ 142 (158)
+..++++||+... .......++... ..|+.. +.+.++.+.+-.++. ..+..-..-..+++..+++|.+..
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~--d~g~~~~pVvFSWPS~g~l~~Yn-----~DreS~~~Sr~aLe~~lr~La~~~ 188 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVH--DSGNDGVPVVFSWPSRGSLLGYN-----YDRESTNYSRPALERLLRYLATDK 188 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHh--hcCCCcceEEEEcCCCCeeeecc-----cchhhhhhhHHHHHHHHHHHHhCC
Confidence 5689999997543 455667777777 556554 444444322211110 000011123467888999998764
Q ss_pred -CCcEEEEEeccCCcc
Q 031524 143 -SKKASINNLWNFNRL 157 (158)
Q Consensus 143 -~~~I~viG~S~GG~l 157 (158)
.++|.|+.||||.++
T Consensus 189 ~~~~I~ilAHSMGtwl 204 (377)
T COG4782 189 PVKRIYLLAHSMGTWL 204 (377)
T ss_pred CCceEEEEEecchHHH
Confidence 689999999999875
No 147
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.70 E-value=0.0043 Score=51.86 Aligned_cols=78 Identities=13% Similarity=0.008 Sum_probs=51.0
Q ss_pred CEEEEEcccCCCChHHHHHHHHHhhcCCCcE---EEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCC
Q 031524 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFK---ALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGS 143 (158)
Q Consensus 67 p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~---V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~ 143 (158)
-.++++||..+....+..+..++. ..||. +..+++.+....... ...-++...-+..++ +..+.
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~ql~~~V~~~l---~~~ga 126 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLA--ILGWLTNGVYAFELSGGDGTYSL--------AVRGEQLFAYVDEVL---AKTGA 126 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhc--chHHHhcccccccccccCCCccc--------cccHHHHHHHHHHHH---hhcCC
Confidence 478999999777778888888899 88999 999888754221110 011112222222222 22346
Q ss_pred CcEEEEEeccCCcc
Q 031524 144 KKASINNLWNFNRL 157 (158)
Q Consensus 144 ~~I~viG~S~GG~l 157 (158)
++|.++||||||..
T Consensus 127 ~~v~LigHS~GG~~ 140 (336)
T COG1075 127 KKVNLIGHSMGGLD 140 (336)
T ss_pred CceEEEeecccchh
Confidence 89999999999975
No 148
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.64 E-value=0.0047 Score=56.69 Aligned_cols=84 Identities=8% Similarity=0.012 Sum_probs=46.0
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHh--------------hcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHH
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKIS--------------QLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDI 131 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La--------------~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di 131 (158)
.-.|++++|..|.-.+.+.+|..-. +....|+-+++|+-+..+ .|......+..+=+
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~t---------Am~G~~l~dQtEYV 159 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFT---------AMHGHILLDQTEYV 159 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhh---------hhccHhHHHHHHHH
Confidence 4579999999998877776654332 012335555555533111 11111112222334
Q ss_pred HHHHHHHHhC-------C---CCcEEEEEeccCCccC
Q 031524 132 HASVNWLKAN-------G---SKKASINNLWNFNRLA 158 (158)
Q Consensus 132 ~~av~~l~~~-------~---~~~I~viG~S~GG~lA 158 (158)
..|++++-+. + +..|.++||||||.+|
T Consensus 160 ~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 160 NDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred HHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHH
Confidence 4455554322 1 4569999999999875
No 149
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.63 E-value=0.015 Score=49.39 Aligned_cols=91 Identities=16% Similarity=0.180 Sum_probs=55.2
Q ss_pred EEEEc-C-----CCCCEEEEEcccC---CCCh-HHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhH
Q 031524 58 AYVVG-K-----EDAPGIVVVQEWW---GVDF-EIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGA 127 (158)
Q Consensus 58 ~~~~~-p-----~~~p~VIllHg~~---G~~~-~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~ 127 (158)
-|+++ | +..|+||++||.+ +..+ ++..+......|. ...++++||---.+.. .....+..
T Consensus 108 ~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~---------~~~~yPtQ 177 (374)
T PF10340_consen 108 YWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDE---------HGHKYPTQ 177 (374)
T ss_pred EEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEecccccccc---------CCCcCchH
Confidence 56766 5 2369999999842 2233 2222211111233 5699999985211000 01133445
Q ss_pred HHHHHHHHHHHH-hCCCCcEEEEEeccCCccC
Q 031524 128 VKDIHASVNWLK-ANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 128 ~~di~~av~~l~-~~~~~~I~viG~S~GG~lA 158 (158)
..++.+..++|. +.+.+.|.++|=|.||.++
T Consensus 178 L~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~ 209 (374)
T PF10340_consen 178 LRQLVATYDYLVESEGNKNIILMGDSAGGNLA 209 (374)
T ss_pred HHHHHHHHHHHHhccCCCeEEEEecCccHHHH
Confidence 677888899987 5567899999999999874
No 150
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.47 E-value=0.0036 Score=50.62 Aligned_cols=84 Identities=11% Similarity=0.005 Sum_probs=53.9
Q ss_pred EEEEEcccCCCChHHHHHHHHHhhcCCC-----cEEEeeecCCCCC-CCCHH-HHHH----------HHcCCChhhHHHH
Q 031524 68 GIVVVQEWWGVDFEIKNHAVKISQLNPG-----FKALIPDLYRGKV-GLDTA-EAQH----------LMSGLDWPGAVKD 130 (158)
Q Consensus 68 ~VIllHg~~G~~~~~~~~A~~La~l~~G-----y~V~~~D~~gG~~-~~~~~-~~~~----------~~~~~~~~~~~~d 130 (158)
..|++||..|....+..++.+|. ..+ -.++.+|--|.-. .+... .+.+ .....++..|
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~--~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w--- 121 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLL--PDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW--- 121 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhh--hcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH---
Confidence 46899999999999999999997 554 3456666544110 11000 0000 0111234334
Q ss_pred HHHHHHHHHhCC-CCcEEEEEeccCCc
Q 031524 131 IHASVNWLKANG-SKKASINNLWNFNR 156 (158)
Q Consensus 131 i~~av~~l~~~~-~~~I~viG~S~GG~ 156 (158)
+..++.+|+++. .+++-++||||||.
T Consensus 122 lk~~msyL~~~Y~i~k~n~VGhSmGg~ 148 (288)
T COG4814 122 LKKAMSYLQKHYNIPKFNAVGHSMGGL 148 (288)
T ss_pred HHHHHHHHHHhcCCceeeeeeeccccH
Confidence 567899998884 78999999999995
No 151
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=96.43 E-value=0.00087 Score=52.16 Aligned_cols=39 Identities=10% Similarity=0.078 Sum_probs=19.6
Q ss_pred CCCEEEEEcccCCCChHHH----HHHHHHhhcCCCcEEEeeecCC
Q 031524 65 DAPGIVVVQEWWGVDFEIK----NHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~----~~A~~La~l~~Gy~V~~~D~~g 105 (158)
+++.||+|||+..+..-+. .+.+.|. +.++..+.+|-.-
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~--~~~~ef~f~dgP~ 45 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALK--KLDFEFVFVDGPH 45 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHH--HTT-EEEEE--SE
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHh--hCcEEEEEecCCc
Confidence 4689999999987765443 4555555 3388888887653
No 152
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=96.34 E-value=0.003 Score=49.45 Aligned_cols=26 Identities=15% Similarity=0.036 Sum_probs=17.8
Q ss_pred HHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 133 ASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 133 ~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
+++.++.++- .++.+|+|+||||..|
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~A 129 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGA 129 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHH
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHH
Confidence 4556665541 3339999999999753
No 153
>PRK04940 hypothetical protein; Provisional
Probab=96.22 E-value=0.012 Score=45.24 Aligned_cols=15 Identities=13% Similarity=-0.117 Sum_probs=13.1
Q ss_pred CcEEEEEeccCCccC
Q 031524 144 KKASINNLWNFNRLA 158 (158)
Q Consensus 144 ~~I~viG~S~GG~lA 158 (158)
+++.+||.|+||..|
T Consensus 60 ~~~~liGSSLGGyyA 74 (180)
T PRK04940 60 ERPLICGVGLGGYWA 74 (180)
T ss_pred CCcEEEEeChHHHHH
Confidence 579999999999865
No 154
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=96.10 E-value=0.0064 Score=49.13 Aligned_cols=92 Identities=13% Similarity=0.122 Sum_probs=49.5
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHh-hcCCCcEEEeeecCC-CCC--CCCH-HHHHH-H-----HcC--CChhhHHHHHH
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKIS-QLNPGFKALIPDLYR-GKV--GLDT-AEAQH-L-----MSG--LDWPGAVKDIH 132 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La-~l~~Gy~V~~~D~~g-G~~--~~~~-~~~~~-~-----~~~--~~~~~~~~di~ 132 (158)
....|++|||.|....+..+.+++. .=..+-.++.++..- |.. .+.. ....+ + -.. .+.....+=+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 3578999999998877777777773 102233444444332 321 0100 00000 0 001 12333445577
Q ss_pred HHHHHHHhCC-CCcEEEEEeccCCcc
Q 031524 133 ASVNWLKANG-SKKASINNLWNFNRL 157 (158)
Q Consensus 133 ~av~~l~~~~-~~~I~viG~S~GG~l 157 (158)
.++.+|+++. .+++-+|||||||..
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~ 116 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLS 116 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHH
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHH
Confidence 8899998874 899999999999864
No 155
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.07 E-value=0.013 Score=51.41 Aligned_cols=82 Identities=17% Similarity=0.110 Sum_probs=52.5
Q ss_pred CCEEEEEcccC---CCCh--HHHHHHHHHhhcCCCcEEEeeecC-C--CC-CCCCHHHHHHHHcCCChhhHHHHHHHHHH
Q 031524 66 APGIVVVQEWW---GVDF--EIKNHAVKISQLNPGFKALIPDLY-R--GK-VGLDTAEAQHLMSGLDWPGAVKDIHASVN 136 (158)
Q Consensus 66 ~p~VIllHg~~---G~~~--~~~~~A~~La~l~~Gy~V~~~D~~-g--G~-~~~~~~~~~~~~~~~~~~~~~~di~~av~ 136 (158)
.|++|++||.. |... .....+..+. .....|+.++|| | |- +.++... .+ ++ ...|+..|++
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~--~~~VVvVt~~YRLG~lGF~st~d~~~----~g--N~--gl~Dq~~AL~ 181 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLL--LKDVVVVTINYRLGPLGFLSTGDSAA----PG--NL--GLFDQLLALR 181 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccc--cCCEEEEEecccceeceeeecCCCCC----CC--cc--cHHHHHHHHH
Confidence 69999999742 2221 1223344444 568999999998 4 31 1111100 01 22 2358889999
Q ss_pred HHHhC------CCCcEEEEEeccCCcc
Q 031524 137 WLKAN------GSKKASINNLWNFNRL 157 (158)
Q Consensus 137 ~l~~~------~~~~I~viG~S~GG~l 157 (158)
|+++. ++++|-++|||.||..
T Consensus 182 wv~~~I~~FGGdp~~vTl~G~saGa~~ 208 (545)
T KOG1516|consen 182 WVKDNIPSFGGDPKNVTLFGHSAGAAS 208 (545)
T ss_pred HHHHHHHhcCCCCCeEEEEeechhHHH
Confidence 99886 3789999999999975
No 156
>KOG3101 consensus Esterase D [General function prediction only]
Probab=95.87 E-value=0.029 Score=44.58 Aligned_cols=38 Identities=13% Similarity=0.159 Sum_probs=26.5
Q ss_pred CCEEEEEcccCCCChHH--HHHHHHHhhcCCCcEEEeeecC
Q 031524 66 APGIVVVQEWWGVDFEI--KNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~--~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
.|++.++.|..=..+.+ +...++.|+ ++|+.|+.||--
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As-~hgl~vV~PDTS 83 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQAS-KHGLAVVAPDTS 83 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHh-hcCeEEECCCCC
Confidence 69999999986554433 233444433 899999999964
No 157
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=95.80 E-value=0.046 Score=44.65 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=50.1
Q ss_pred CEEEEEcccCCCCh--HHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC--
Q 031524 67 PGIVVVQEWWGVDF--EIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG-- 142 (158)
Q Consensus 67 p~VIllHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~-- 142 (158)
-.+|++||++..-. .+..+.+.+..+ .|..|++.|...|-..+ +.. +.. +.+..+.+.+++.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~-~g~~v~~leig~g~~~s-------~l~--pl~---~Qv~~~ce~v~~m~~l 90 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEEL-PGSPVYCLEIGDGIKDS-------SLM--PLW---EQVDVACEKVKQMPEL 90 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhC-CCCeeEEEEecCCcchh-------hhc--cHH---HHHHHHHHHHhcchhc
Confidence 46889999976543 366777777654 69999999986662111 101 111 22334445555433
Q ss_pred CCcEEEEEeccCCccC
Q 031524 143 SKKASINNLWNFNRLA 158 (158)
Q Consensus 143 ~~~I~viG~S~GG~lA 158 (158)
++-+.++|+|.||.++
T Consensus 91 sqGynivg~SQGglv~ 106 (296)
T KOG2541|consen 91 SQGYNIVGYSQGGLVA 106 (296)
T ss_pred cCceEEEEEccccHHH
Confidence 5779999999999763
No 158
>PLN02606 palmitoyl-protein thioesterase
Probab=95.58 E-value=0.055 Score=44.82 Aligned_cols=78 Identities=13% Similarity=0.059 Sum_probs=46.6
Q ss_pred CCEEEEEcccC--CCChHHHHHHHHHhhcCC-CcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC
Q 031524 66 APGIVVVQEWW--GVDFEIKNHAVKISQLNP-GFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG 142 (158)
Q Consensus 66 ~p~VIllHg~~--G~~~~~~~~A~~La~l~~-Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~ 142 (158)
.-.||++||++ ..+..+..+.+.+. +. |+-+.++.+.++...+ +.. +.. +.++.+.+.+++.+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~--~~~~~pg~~v~ig~~~~~s-------~~~--~~~---~Qv~~vce~l~~~~ 91 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLI--NHSGYPGTCVEIGNGVQDS-------LFM--PLR---QQASIACEKIKQMK 91 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHH--hCCCCCeEEEEECCCcccc-------ccc--CHH---HHHHHHHHHHhcch
Confidence 34688999997 45667777877775 43 7777777643221110 111 111 33344444454432
Q ss_pred --CCcEEEEEeccCCcc
Q 031524 143 --SKKASINNLWNFNRL 157 (158)
Q Consensus 143 --~~~I~viG~S~GG~l 157 (158)
.+-+.+||||.||.+
T Consensus 92 ~L~~G~naIGfSQGglf 108 (306)
T PLN02606 92 ELSEGYNIVAESQGNLV 108 (306)
T ss_pred hhcCceEEEEEcchhHH
Confidence 456999999999975
No 159
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.57 E-value=0.069 Score=43.36 Aligned_cols=99 Identities=14% Similarity=0.027 Sum_probs=57.7
Q ss_pred eEEEEEEcC-CCCCEEEEEcccCCCChHHHHHHHHHhhcCCC--cEEEeeecCC-CCCCCCHHHHHHHH--cCCChhhHH
Q 031524 55 TFDAYVVGK-EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPG--FKALIPDLYR-GKVGLDTAEAQHLM--SGLDWPGAV 128 (158)
Q Consensus 55 ~l~~~~~~p-~~~p~VIllHg~~G~~~~~~~~A~~La~l~~G--y~V~~~D~~g-G~~~~~~~~~~~~~--~~~~~~~~~ 128 (158)
++.-|+..+ ...+.++.++|..|....+..+++.|-+ +.+ +.+..+.--+ -..+....+..+.. ..++. .
T Consensus 17 ~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~-~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL---~ 92 (301)
T KOG3975|consen 17 TLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHL-NLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSL---Q 92 (301)
T ss_pred eeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHH-hcccccceeEEeccccccCCcccccccccccccccch---h
Confidence 444444444 3467888899999999999999998862 233 3455544333 11111111110110 11222 2
Q ss_pred HHHHHHHHHHHhC-C-CCcEEEEEeccCCcc
Q 031524 129 KDIHASVNWLKAN-G-SKKASINNLWNFNRL 157 (158)
Q Consensus 129 ~di~~av~~l~~~-~-~~~I~viG~S~GG~l 157 (158)
+.++--++++++. + ..||.++|||.|+++
T Consensus 93 ~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm 123 (301)
T KOG3975|consen 93 DQVDHKLAFIKEYVPKDRKIYIIGHSIGAYM 123 (301)
T ss_pred hHHHHHHHHHHHhCCCCCEEEEEecchhHHH
Confidence 3355567777776 3 679999999999875
No 160
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=95.52 E-value=0.015 Score=49.77 Aligned_cols=92 Identities=11% Similarity=-0.038 Sum_probs=52.6
Q ss_pred CCEEEEEcccCCCChH--HHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC-
Q 031524 66 APGIVVVQEWWGVDFE--IKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN- 141 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~--~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~- 141 (158)
.|++|++-|-...... ...+...||. +.|-.+++++.|- |.+-.-.+...+-+..++.++.++|+...+++++.+
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~-~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAK-EFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHH-HHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHH-HcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 6777777653322211 1123344442 4477888888885 665211111112355678999999999999999854
Q ss_pred ---CCCcEEEEEeccCCccC
Q 031524 142 ---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 142 ---~~~~I~viG~S~GG~lA 158 (158)
+..++.++|-|.||.+|
T Consensus 108 ~~~~~~pwI~~GgSY~G~La 127 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALA 127 (434)
T ss_dssp TTGCC--EEEEEETHHHHHH
T ss_pred cCCCCCCEEEECCcchhHHH
Confidence 24689999999999874
No 161
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.35 E-value=0.14 Score=41.36 Aligned_cols=87 Identities=10% Similarity=0.035 Sum_probs=49.7
Q ss_pred EEEEcCCCCCEEEEE-ccc-CCCCh--HHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHH
Q 031524 58 AYVVGKEDAPGIVVV-QEW-WGVDF--EIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHA 133 (158)
Q Consensus 58 ~~~~~p~~~p~VIll-Hg~-~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~ 133 (158)
+|+..|.+..+||.+ -|. .|..+ .++.+-+.|+ ++||.|++.-|.-+-. ....+.+ +.+..+.
T Consensus 8 ~wvl~P~~P~gvihFiGGaf~ga~P~itYr~lLe~La--~~Gy~ViAtPy~~tfD--H~~~A~~---------~~~~f~~ 74 (250)
T PF07082_consen 8 SWVLIPPRPKGVIHFIGGAFVGAAPQITYRYLLERLA--DRGYAVIATPYVVTFD--HQAIARE---------VWERFER 74 (250)
T ss_pred cEEEeCCCCCEEEEEcCcceeccCcHHHHHHHHHHHH--hCCcEEEEEecCCCCc--HHHHHHH---------HHHHHHH
Confidence 477777543355544 443 35444 4678899999 9999999987632211 1111111 1122333
Q ss_pred HHHHHHhCC-----CCcEEEEEeccCCcc
Q 031524 134 SVNWLKANG-----SKKASINNLWNFNRL 157 (158)
Q Consensus 134 av~~l~~~~-----~~~I~viG~S~GG~l 157 (158)
+++.+.++. .-++.=+|||+|..+
T Consensus 75 ~~~~L~~~~~~~~~~lP~~~vGHSlGckl 103 (250)
T PF07082_consen 75 CLRALQKRGGLDPAYLPVYGVGHSLGCKL 103 (250)
T ss_pred HHHHHHHhcCCCcccCCeeeeecccchHH
Confidence 445554431 236777999999864
No 162
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=95.32 E-value=0.064 Score=39.69 Aligned_cols=67 Identities=12% Similarity=-0.104 Sum_probs=39.7
Q ss_pred CCChHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHh-CCCCcEEEEEeccC
Q 031524 77 GVDFEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKA-NGSKKASINNLWNF 154 (158)
Q Consensus 77 G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~-~~~~~I~viG~S~G 154 (158)
+....+..++..|. ..+.|+++|+.+ +..... ..+.+...++.. +.+.. .+..++.++|||+|
T Consensus 10 ~~~~~~~~~~~~l~---~~~~v~~~~~~g~~~~~~~---------~~~~~~~~~~~~---~~l~~~~~~~~~~l~g~s~G 74 (212)
T smart00824 10 SGPHEYARLAAALR---GRRDVSALPLPGFGPGEPL---------PASADALVEAQA---EAVLRAAGGRPFVLVGHSSG 74 (212)
T ss_pred CcHHHHHHHHHhcC---CCccEEEecCCCCCCCCCC---------CCCHHHHHHHHH---HHHHHhcCCCCeEEEEECHH
Confidence 34456777888886 469999999887 432110 112223333222 22222 23568999999999
Q ss_pred CccC
Q 031524 155 NRLA 158 (158)
Q Consensus 155 G~lA 158 (158)
|.++
T Consensus 75 g~~a 78 (212)
T smart00824 75 GLLA 78 (212)
T ss_pred HHHH
Confidence 9763
No 163
>COG3150 Predicted esterase [General function prediction only]
Probab=95.02 E-value=0.083 Score=40.44 Aligned_cols=33 Identities=21% Similarity=0.043 Sum_probs=24.4
Q ss_pred ChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 123 DWPGAVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 123 ~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
++....+.++.+|..... +.++|+|-|+||..|
T Consensus 41 ~p~~a~~ele~~i~~~~~---~~p~ivGssLGGY~A 73 (191)
T COG3150 41 DPQQALKELEKAVQELGD---ESPLIVGSSLGGYYA 73 (191)
T ss_pred CHHHHHHHHHHHHHHcCC---CCceEEeecchHHHH
Confidence 455566777777776643 459999999999864
No 164
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.00 E-value=0.12 Score=41.94 Aligned_cols=15 Identities=13% Similarity=-0.082 Sum_probs=13.4
Q ss_pred CCcEEEEEeccCCcc
Q 031524 143 SKKASINNLWNFNRL 157 (158)
Q Consensus 143 ~~~I~viG~S~GG~l 157 (158)
.++.+|+|||+||.+
T Consensus 136 ~~~~~i~GhSlGGLf 150 (264)
T COG2819 136 SERTAIIGHSLGGLF 150 (264)
T ss_pred cccceeeeecchhHH
Confidence 677999999999976
No 165
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=94.95 E-value=0.044 Score=46.64 Aligned_cols=62 Identities=8% Similarity=-0.010 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhcCCCcEE----Eee--ecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccC
Q 031524 81 EIKNHAVKISQLNPGFKA----LIP--DLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSKKASINNLWNF 154 (158)
Q Consensus 81 ~~~~~A~~La~l~~Gy~V----~~~--D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~G 154 (158)
.+..+.+.|. +.||.. ++. |+| .+.. ..+....++...|+.+.+...++|.|||||||
T Consensus 66 ~~~~li~~L~--~~GY~~~~~l~~~pYDWR--~~~~------------~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmG 129 (389)
T PF02450_consen 66 YFAKLIENLE--KLGYDRGKDLFAAPYDWR--LSPA------------ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMG 129 (389)
T ss_pred hHHHHHHHHH--hcCcccCCEEEEEeechh--hchh------------hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 7888999999 888765 332 332 1111 01234455666676665444689999999999
Q ss_pred CccC
Q 031524 155 NRLA 158 (158)
Q Consensus 155 G~lA 158 (158)
|.++
T Consensus 130 gl~~ 133 (389)
T PF02450_consen 130 GLVA 133 (389)
T ss_pred chHH
Confidence 9763
No 166
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=94.85 E-value=0.051 Score=34.64 Aligned_cols=46 Identities=7% Similarity=0.173 Sum_probs=25.8
Q ss_pred ccccCCCCceeEEEeeCCc-eEEEEEEcCC--------CCCEEEEEcccCCCChH
Q 031524 36 MADSAASPFKKIQIQRDDT-TFDAYVVGKE--------DAPGIVVVQEWWGVDFE 81 (158)
Q Consensus 36 ~~~~~~~~~~~i~i~~~~~-~l~~~~~~p~--------~~p~VIllHg~~G~~~~ 81 (158)
+.+.-..+.|+-.++++|| .+..+...++ ++|+|++.||+.+....
T Consensus 4 ~i~~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 4 LIEKHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp HHHHTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred HHHHcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 4455677889999999998 7777766542 37899999999876543
No 167
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=94.60 E-value=0.02 Score=40.84 Aligned_cols=30 Identities=17% Similarity=-0.014 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhC-CCCcEEEEEeccCCccC
Q 031524 129 KDIHASVNWLKAN-GSKKASINNLWNFNRLA 158 (158)
Q Consensus 129 ~di~~av~~l~~~-~~~~I~viG~S~GG~lA 158 (158)
+.+...++.+.+. +..+|.+.|||+||.+|
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA 78 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALA 78 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHH
Confidence 3444444444333 35789999999999875
No 168
>COG4099 Predicted peptidase [General function prediction only]
Probab=94.53 E-value=0.3 Score=40.75 Aligned_cols=103 Identities=12% Similarity=0.028 Sum_probs=50.0
Q ss_pred ceeEEEeeC--CceEEEEEEcC------CCC-CEEEEEcccCCCChH-HHH-------HHHHHhhcCCCcEEEeeecCCC
Q 031524 44 FKKIQIQRD--DTTFDAYVVGK------EDA-PGIVVVQEWWGVDFE-IKN-------HAVKISQLNPGFKALIPDLYRG 106 (158)
Q Consensus 44 ~~~i~i~~~--~~~l~~~~~~p------~~~-p~VIllHg~~G~~~~-~~~-------~A~~La~l~~Gy~V~~~D~~gG 106 (158)
+..+++..+ +..+.=.++.| .+. |.||++||....... ... ++...- +-++-|++|-|--=
T Consensus 160 F~a~~f~d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~p--edqcfVlAPQy~~i 237 (387)
T COG4099 160 FQAVEFYDESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGP--EDQCFVLAPQYNPI 237 (387)
T ss_pred hhheEeeccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecc--cCceEEEccccccc
Confidence 344444333 33666666666 234 999999987544321 111 122222 44556666653210
Q ss_pred CCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC---CCCcEEEEEeccCCcc
Q 031524 107 KVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN---GSKKASINNLWNFNRL 157 (158)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~---~~~~I~viG~S~GG~l 157 (158)
- .+.++ ...+.. ..-++.+.+-+.++ +..||.++|+|+||.-
T Consensus 238 f--~d~e~-----~t~~~l--~~~idli~~vlas~ynID~sRIYviGlSrG~~g 282 (387)
T COG4099 238 F--ADSEE-----KTLLYL--IEKIDLILEVLASTYNIDRSRIYVIGLSRGGFG 282 (387)
T ss_pred c--ccccc-----ccchhH--HHHHHHHHHHHhhccCcccceEEEEeecCcchh
Confidence 0 00010 000111 11122222344444 3789999999999963
No 169
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=94.39 E-value=0.18 Score=43.95 Aligned_cols=100 Identities=13% Similarity=0.005 Sum_probs=56.2
Q ss_pred ceEEEEEEc----CCCCCEEEEEcccCCCChHHHHHH-----------HHHh----hcCCCcEEEeeecC-C-CCCCCCH
Q 031524 54 TTFDAYVVG----KEDAPGIVVVQEWWGVDFEIKNHA-----------VKIS----QLNPGFKALIPDLY-R-GKVGLDT 112 (158)
Q Consensus 54 ~~l~~~~~~----p~~~p~VIllHg~~G~~~~~~~~A-----------~~La----~l~~Gy~V~~~D~~-g-G~~~~~~ 112 (158)
..+.=|++. |...|.||.++|..|.....-.+. ..+. ...+-..++.+|.+ | |.+-.+.
T Consensus 61 ~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~ 140 (462)
T PTZ00472 61 KHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADK 140 (462)
T ss_pred ceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCC
Confidence 355555554 245799999998776553221100 0010 01122567777754 5 5543221
Q ss_pred HHHHHHHcCCChhhHHHHHHHHHHHHHh-CC---CCcEEEEEeccCCccC
Q 031524 113 AEAQHLMSGLDWPGAVKDIHASVNWLKA-NG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 113 ~~~~~~~~~~~~~~~~~di~~av~~l~~-~~---~~~I~viG~S~GG~lA 158 (158)
.+ ...+.+...+|+..+++.+-+ .+ ..++.|+|+|+||.++
T Consensus 141 ~~-----~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~ 185 (462)
T PTZ00472 141 AD-----YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYA 185 (462)
T ss_pred CC-----CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhH
Confidence 10 012345677888877765433 33 4789999999999863
No 170
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=93.72 E-value=0.044 Score=42.72 Aligned_cols=31 Identities=10% Similarity=-0.097 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHh-CCCCcEEEEEeccCCccC
Q 031524 128 VKDIHASVNWLKA-NGSKKASINNLWNFNRLA 158 (158)
Q Consensus 128 ~~di~~av~~l~~-~~~~~I~viG~S~GG~lA 158 (158)
..++...++.+++ .+..+|.+.|||+||.+|
T Consensus 111 ~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA 142 (229)
T cd00519 111 YNQVLPELKSALKQYPDYKIIVTGHSLGGALA 142 (229)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEccCHHHHHH
Confidence 3444445544433 346789999999999875
No 171
>PLN02633 palmitoyl protein thioesterase family protein
Probab=93.53 E-value=0.34 Score=40.34 Aligned_cols=78 Identities=13% Similarity=0.055 Sum_probs=45.6
Q ss_pred CEEEEEcccCCC--ChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC--
Q 031524 67 PGIVVVQEWWGV--DFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG-- 142 (158)
Q Consensus 67 p~VIllHg~~G~--~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~-- 142 (158)
-.+|+.||++.. +..+..+++.+.+ -.|..|.++..-++ ... .+.. +.. +.++.+.+.+++.+
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~-~~g~~~~~i~ig~~-~~~------s~~~--~~~---~Qve~vce~l~~~~~l 92 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTN-LSGSPGFCLEIGNG-VGD------SWLM--PLT---QQAEIACEKVKQMKEL 92 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHh-CCCCceEEEEECCC-ccc------ccee--CHH---HHHHHHHHHHhhchhh
Confidence 468899998643 3467777777762 25888888766222 110 0111 222 22333444444432
Q ss_pred CCcEEEEEeccCCcc
Q 031524 143 SKKASINNLWNFNRL 157 (158)
Q Consensus 143 ~~~I~viG~S~GG~l 157 (158)
.+-+.+||||.||.+
T Consensus 93 ~~G~naIGfSQGGlf 107 (314)
T PLN02633 93 SQGYNIVGRSQGNLV 107 (314)
T ss_pred hCcEEEEEEccchHH
Confidence 456999999999975
No 172
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=93.41 E-value=0.18 Score=41.40 Aligned_cols=86 Identities=8% Similarity=0.024 Sum_probs=38.8
Q ss_pred CCCCEEEEEcccCCC---ChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHh
Q 031524 64 EDAPGIVVVQEWWGV---DFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKA 140 (158)
Q Consensus 64 ~~~p~VIllHg~~G~---~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~ 140 (158)
.+...||+.||++.. ...+..+...+.+.-.|-.|.++++..+... +. +. .+.. .+-+.++.+.+.+++
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~-D~-~~-s~f~-----~v~~Qv~~vc~~l~~ 74 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSE-DV-EN-SFFG-----NVNDQVEQVCEQLAN 74 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHH-HH-HH-HHHS-----HHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcch-hh-hh-hHHH-----HHHHHHHHHHHHHhh
Confidence 334578999998753 2245555444432136889999887432210 00 11 1111 122334444455555
Q ss_pred CC--CCcEEEEEeccCCcc
Q 031524 141 NG--SKKASINNLWNFNRL 157 (158)
Q Consensus 141 ~~--~~~I~viG~S~GG~l 157 (158)
.+ .+-+.+||||-||.+
T Consensus 75 ~p~L~~G~~~IGfSQGgl~ 93 (279)
T PF02089_consen 75 DPELANGFNAIGFSQGGLF 93 (279)
T ss_dssp -GGGTT-EEEEEETCHHHH
T ss_pred ChhhhcceeeeeeccccHH
Confidence 43 467999999999965
No 173
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=93.32 E-value=0.53 Score=37.88 Aligned_cols=78 Identities=10% Similarity=0.070 Sum_probs=54.5
Q ss_pred CEEEEEcccCCC---ChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC-
Q 031524 67 PGIVVVQEWWGV---DFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG- 142 (158)
Q Consensus 67 p~VIllHg~~G~---~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~- 142 (158)
-.||++-|.... -.+...++..|- +.+|-.+.+-++..+.+. +.....+-++|+..+++++...+
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~ld--e~~wslVq~q~~Ssy~G~---------Gt~slk~D~edl~~l~~Hi~~~~f 105 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLD--ENSWSLVQPQLRSSYNGY---------GTFSLKDDVEDLKCLLEHIQLCGF 105 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHh--hccceeeeeecccccccc---------ccccccccHHHHHHHHHHhhccCc
Confidence 457777776432 256778899998 999999999887533211 01122333588999999886654
Q ss_pred CCcEEEEEeccCC
Q 031524 143 SKKASINNLWNFN 155 (158)
Q Consensus 143 ~~~I~viG~S~GG 155 (158)
...|.++|||-|.
T Consensus 106 St~vVL~GhSTGc 118 (299)
T KOG4840|consen 106 STDVVLVGHSTGC 118 (299)
T ss_pred ccceEEEecCccc
Confidence 5699999999885
No 174
>COG0627 Predicted esterase [General function prediction only]
Probab=93.09 E-value=0.15 Score=42.42 Aligned_cols=39 Identities=13% Similarity=0.234 Sum_probs=25.9
Q ss_pred CCCEEEEEcccCCCC--hHHHHHHHHHhhcCCCcEEEeeecC
Q 031524 65 DAPGIVVVQEWWGVD--FEIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 65 ~~p~VIllHg~~G~~--~~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
+.|+++++||..+.. .+.+.-.++.++ ..|+.++++|-.
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~-~~g~~~~~p~t~ 93 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQAD-ESGWAVVTPDTS 93 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhh-hcCeEEecCCCC
Confidence 468899999988763 333433343332 789999998544
No 175
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=92.88 E-value=0.52 Score=40.44 Aligned_cols=91 Identities=16% Similarity=0.184 Sum_probs=53.5
Q ss_pred eEEEEEEcCC------CCCEEEEEcccCCCChHHHHHHHHHhhcCC---C------cEEEeeecCC-CCCCCCHHHHHHH
Q 031524 55 TFDAYVVGKE------DAPGIVVVQEWWGVDFEIKNHAVKISQLNP---G------FKALIPDLYR-GKVGLDTAEAQHL 118 (158)
Q Consensus 55 ~l~~~~~~p~------~~p~VIllHg~~G~~~~~~~~A~~La~l~~---G------y~V~~~D~~g-G~~~~~~~~~~~~ 118 (158)
.++-..++|. +.-.++++|||.|+-.++..+.--|. +. | |.|++|.+.| |-+.....
T Consensus 135 ~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT--~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk----- 207 (469)
T KOG2565|consen 135 KIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLT--DPKRHGNESDYAFEVIAPSLPGYGWSDAPSK----- 207 (469)
T ss_pred eEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhc--CccccCCccceeEEEeccCCCCcccCcCCcc-----
Confidence 5555555542 13468999999999877777777776 33 3 8999999998 65532111
Q ss_pred HcCCChhhHHHHHHHHHHHHH-hCCCCcEEEEEeccCCcc
Q 031524 119 MSGLDWPGAVKDIHASVNWLK-ANGSKKASINNLWNFNRL 157 (158)
Q Consensus 119 ~~~~~~~~~~~di~~av~~l~-~~~~~~I~viG~S~GG~l 157 (158)
..++..+. ..+++-|. ..+.++..|-|--||..+
T Consensus 208 -~GFn~~a~----ArvmrkLMlRLg~nkffiqGgDwGSiI 242 (469)
T KOG2565|consen 208 -TGFNAAAT----ARVMRKLMLRLGYNKFFIQGGDWGSII 242 (469)
T ss_pred -CCccHHHH----HHHHHHHHHHhCcceeEeecCchHHHH
Confidence 11121111 11222221 124677778787777643
No 176
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=92.75 E-value=0.41 Score=37.89 Aligned_cols=26 Identities=19% Similarity=0.119 Sum_probs=18.3
Q ss_pred HHHHHHHhC---CCCcEEEEEeccCCccC
Q 031524 133 ASVNWLKAN---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 133 ~av~~l~~~---~~~~I~viG~S~GG~lA 158 (158)
.|++|+++. ..++|.+.|||.||.+|
T Consensus 70 ~A~~yl~~~~~~~~~~i~v~GHSkGGnLA 98 (224)
T PF11187_consen 70 SALAYLKKIAKKYPGKIYVTGHSKGGNLA 98 (224)
T ss_pred HHHHHHHHHHHhCCCCEEEEEechhhHHH
Confidence 344554432 35679999999999876
No 177
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=92.63 E-value=0.45 Score=37.34 Aligned_cols=90 Identities=18% Similarity=0.114 Sum_probs=47.9
Q ss_pred CEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC-------CCCCCCHHHHHHHHcCC--C---hhhHHHHHHHH
Q 031524 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-------GKVGLDTAEAQHLMSGL--D---WPGAVKDIHAS 134 (158)
Q Consensus 67 p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g-------G~~~~~~~~~~~~~~~~--~---~~~~~~di~~a 134 (158)
..||++||.......+..+.+.|. -....-++|.-.. |......-+..++.... + .....+-+...
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~--l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLP--LPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCC--CCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 479999998777666666666676 5677777773321 11100000000000000 1 11222333344
Q ss_pred HHHHHhC--CCCcEEEEEeccCCccC
Q 031524 135 VNWLKAN--GSKKASINNLWNFNRLA 158 (158)
Q Consensus 135 v~~l~~~--~~~~I~viG~S~GG~lA 158 (158)
+++..+. +..+|.+-|||+||.+|
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~a 107 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALA 107 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHH
Confidence 4444333 36899999999999764
No 178
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=92.17 E-value=0.25 Score=44.56 Aligned_cols=67 Identities=9% Similarity=0.030 Sum_probs=42.3
Q ss_pred HHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC-CCCcEEEEEeccCCcc
Q 031524 82 IKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN-GSKKASINNLWNFNRL 157 (158)
Q Consensus 82 ~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~-~~~~I~viG~S~GG~l 157 (158)
+..+.+.|+ +.||. --|+++ .+. ...+.. ..-..+....++...|+.+.+. +.+||.|+||||||.+
T Consensus 158 w~kLIe~L~--~iGY~--~~nL~gAPYD---WRls~~--~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv 226 (642)
T PLN02517 158 WAVLIANLA--RIGYE--EKNMYMAAYD---WRLSFQ--NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLY 226 (642)
T ss_pred HHHHHHHHH--HcCCC--CCceeecccc---cccCcc--chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHH
Confidence 368999999 99998 466665 332 100000 0001134556677778777554 3589999999999965
No 179
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=91.69 E-value=0.24 Score=39.39 Aligned_cols=90 Identities=9% Similarity=0.066 Sum_probs=47.2
Q ss_pred CCCEEEEEcccCCCChHHH----HHHHHHhhcCCCcEEEeeecCC-----CCCCCCH-------H---H-HHHHHcCCC-
Q 031524 65 DAPGIVVVQEWWGVDFEIK----NHAVKISQLNPGFKALIPDLYR-----GKVGLDT-------A---E-AQHLMSGLD- 123 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~----~~A~~La~l~~Gy~V~~~D~~g-----G~~~~~~-------~---~-~~~~~~~~~- 123 (158)
+.+.|+++||+..+...+. .+.+.|. +. +..+.||-+. +.+.... . . ...|...-+
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~--k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~ 80 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLK--KL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEA 80 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHH--hh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccc
Confidence 3578999999987765443 4555555 44 6666666553 1111100 0 0 011111000
Q ss_pred ----hhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 124 ----WPGAVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 124 ----~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
....-+-+.-+.+|++++ ..=-||+|||.|+.++
T Consensus 81 ~~~~~~~~eesl~yl~~~i~en-GPFDGllGFSQGA~la 118 (230)
T KOG2551|consen 81 SFTEYFGFEESLEYLEDYIKEN-GPFDGLLGFSQGAALA 118 (230)
T ss_pred ccccccChHHHHHHHHHHHHHh-CCCccccccchhHHHH
Confidence 001122255556677666 2446899999998764
No 180
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=91.41 E-value=0.78 Score=35.26 Aligned_cols=31 Identities=6% Similarity=-0.203 Sum_probs=21.7
Q ss_pred ChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCcc
Q 031524 123 DWPGAVKDIHASVNWLKANGSKKASINNLWNFNRL 157 (158)
Q Consensus 123 ~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~l 157 (158)
..++|++.+.+.+..+ .+.+.+|+||+|+.+
T Consensus 42 ~~~dWi~~l~~~v~a~----~~~~vlVAHSLGc~~ 72 (181)
T COG3545 42 VLDDWIARLEKEVNAA----EGPVVLVAHSLGCAT 72 (181)
T ss_pred CHHHHHHHHHHHHhcc----CCCeEEEEecccHHH
Confidence 4456666666666554 456999999999753
No 181
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=91.03 E-value=0.81 Score=40.06 Aligned_cols=67 Identities=7% Similarity=-0.018 Sum_probs=40.0
Q ss_pred hHHHHHHHHHhhcCCCcE----EEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC-CCCcEEEEEeccC
Q 031524 80 FEIKNHAVKISQLNPGFK----ALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN-GSKKASINNLWNF 154 (158)
Q Consensus 80 ~~~~~~A~~La~l~~Gy~----V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~-~~~~I~viG~S~G 154 (158)
.++..+.+.|+ .-||. ++..-|-...+..+.++. +.....+..-++..-+. +.+||.||+||||
T Consensus 124 ~~w~~~i~~lv--~~GYe~~~~l~ga~YDwRls~~~~e~r---------d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG 192 (473)
T KOG2369|consen 124 WYWHELIENLV--GIGYERGKTLFGAPYDWRLSYHNSEER---------DQYLSKLKKKIETMYKLNGGKKVVLISHSMG 192 (473)
T ss_pred HHHHHHHHHHH--hhCcccCceeeccccchhhccCChhHH---------HHHHHHHHHHHHHHHHHcCCCceEEEecCCc
Confidence 36677888888 88887 333322112221222221 12345566666666444 4589999999999
Q ss_pred Ccc
Q 031524 155 NRL 157 (158)
Q Consensus 155 G~l 157 (158)
|.+
T Consensus 193 ~l~ 195 (473)
T KOG2369|consen 193 GLY 195 (473)
T ss_pred cHH
Confidence 965
No 182
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=90.64 E-value=0.59 Score=42.29 Aligned_cols=85 Identities=13% Similarity=0.123 Sum_probs=53.5
Q ss_pred eEEEEEEc-CCCCCEEEEEcccC-------CCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhh
Q 031524 55 TFDAYVVG-KEDAPGIVVVQEWW-------GVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPG 126 (158)
Q Consensus 55 ~l~~~~~~-p~~~p~VIllHg~~-------G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~ 126 (158)
.+.+|.-. |.+.-.|+.+||.+ ++..+++.+|+. .|.-|+.+||-= .+ ...++.
T Consensus 384 ~~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~a-----L~cPiiSVdYSL--AP-----------EaPFPR 445 (880)
T KOG4388|consen 384 SLELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQA-----LGCPIISVDYSL--AP-----------EAPFPR 445 (880)
T ss_pred ccccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHH-----hCCCeEEeeecc--CC-----------CCCCCc
Confidence 45555432 22334677788742 123466777764 478899999842 11 113344
Q ss_pred HHHHHHHHHHHHHhC----C--CCcEEEEEeccCCcc
Q 031524 127 AVKDIHASVNWLKAN----G--SKKASINNLWNFNRL 157 (158)
Q Consensus 127 ~~~di~~av~~l~~~----~--~~~I~viG~S~GG~l 157 (158)
..+++--|.-|+-++ + .+||.+.|-|.||++
T Consensus 446 aleEv~fAYcW~inn~allG~TgEriv~aGDSAGgNL 482 (880)
T KOG4388|consen 446 ALEEVFFAYCWAINNCALLGSTGERIVLAGDSAGGNL 482 (880)
T ss_pred HHHHHHHHHHHHhcCHHHhCcccceEEEeccCCCcce
Confidence 456666677787665 2 689999999999986
No 183
>PLN02454 triacylglycerol lipase
Probab=90.36 E-value=0.2 Score=43.18 Aligned_cols=33 Identities=15% Similarity=0.024 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHHHHhC-CCC--cEEEEEeccCCccC
Q 031524 126 GAVKDIHASVNWLKAN-GSK--KASINNLWNFNRLA 158 (158)
Q Consensus 126 ~~~~di~~av~~l~~~-~~~--~I~viG~S~GG~lA 158 (158)
...+++...++.+.+. +.. +|.+.|||+||.+|
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALA 242 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLA 242 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHH
Confidence 3556667777777654 223 49999999999875
No 184
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=90.20 E-value=3.9 Score=35.66 Aligned_cols=86 Identities=14% Similarity=-0.018 Sum_probs=54.3
Q ss_pred CEEEEEcccCCC-------ChHHHHHHHHHhhcCCCcEEEeeecCC-CCC-CCC---HHHHHHHHcCCChhhHHHHHHHH
Q 031524 67 PGIVVVQEWWGV-------DFEIKNHAVKISQLNPGFKALIPDLYR-GKV-GLD---TAEAQHLMSGLDWPGAVKDIHAS 134 (158)
Q Consensus 67 p~VIllHg~~G~-------~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~-~~~---~~~~~~~~~~~~~~~~~~di~~a 134 (158)
..|++.-|.-|. ...+.++|..|. -.++-++.|- |.+ +-. ...+ ...+.++-++..+|-...
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~-----AllVFaEHRyYGeS~PFG~~s~k~~-~hlgyLtseQALADfA~l 154 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELK-----ALLVFAEHRYYGESLPFGSQSYKDA-RHLGYLTSEQALADFAEL 154 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhC-----ceEEEeehhccccCCCCcchhccCh-hhhccccHHHHHHHHHHH
Confidence 456666665443 234556666554 3455555543 543 111 1111 224566888899999999
Q ss_pred HHHHHhCC---CCcEEEEEeccCCccC
Q 031524 135 VNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 135 v~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
+.+||+.. ..+|.++|-|.||.+|
T Consensus 155 l~~lK~~~~a~~~pvIafGGSYGGMLa 181 (492)
T KOG2183|consen 155 LTFLKRDLSAEASPVIAFGGSYGGMLA 181 (492)
T ss_pred HHHHhhccccccCcEEEecCchhhHHH
Confidence 99998862 5689999999999874
No 185
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=90.02 E-value=0.42 Score=41.04 Aligned_cols=84 Identities=11% Similarity=-0.025 Sum_probs=41.5
Q ss_pred CCEEEEEcccCC-CChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCC
Q 031524 66 APGIVVVQEWWG-VDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSK 144 (158)
Q Consensus 66 ~p~VIllHg~~G-~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~ 144 (158)
.-.||+.||+.| ...++...+.....-..++.++...+.+ .... ..+..+.++ +. ..++ .++.+....-+
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~-~~~~-T~~Gv~~lG---~R-la~~---~~e~~~~~si~ 150 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMN-NMCQ-TFDGVDVLG---ER-LAEE---VKETLYDYSIE 150 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeecccc-chhh-ccccceeee---cc-cHHH---Hhhhhhccccc
Confidence 357899999998 3456666666655102344444433332 1110 001111122 11 1112 22222211147
Q ss_pred cEEEEEeccCCccC
Q 031524 145 KASINNLWNFNRLA 158 (158)
Q Consensus 145 ~I~viG~S~GG~lA 158 (158)
+|..+|||+||.++
T Consensus 151 kISfvghSLGGLva 164 (405)
T KOG4372|consen 151 KISFVGHSLGGLVA 164 (405)
T ss_pred eeeeeeeecCCeee
Confidence 99999999999764
No 186
>PLN02310 triacylglycerol lipase
Probab=89.44 E-value=0.2 Score=43.15 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHhCC-CCcEEEEEeccCCccC
Q 031524 127 AVKDIHASVNWLKANG-SKKASINNLWNFNRLA 158 (158)
Q Consensus 127 ~~~di~~av~~l~~~~-~~~I~viG~S~GG~lA 158 (158)
+.+.+...++..+..+ .-+|.|.|||+||.+|
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALA 223 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALA 223 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHH
Confidence 3344444444333222 3579999999999875
No 187
>PLN03037 lipase class 3 family protein; Provisional
Probab=89.15 E-value=0.2 Score=44.36 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=22.0
Q ss_pred hHHHHHHHHHHHHHhCC-CCcEEEEEeccCCccC
Q 031524 126 GAVKDIHASVNWLKANG-SKKASINNLWNFNRLA 158 (158)
Q Consensus 126 ~~~~di~~av~~l~~~~-~~~I~viG~S~GG~lA 158 (158)
++.++|...++..+..+ ..+|.|.|||+||.+|
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALA 332 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALA 332 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHH
Confidence 34455555555544332 3579999999999875
No 188
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=89.12 E-value=1.5 Score=39.19 Aligned_cols=79 Identities=10% Similarity=0.008 Sum_probs=45.8
Q ss_pred CCCCEEEEEc------ccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHH
Q 031524 64 EDAPGIVVVQ------EWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNW 137 (158)
Q Consensus 64 ~~~p~VIllH------g~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~ 137 (158)
.+.|.||+=+ |+.|.+. -.++...|. .|+-|+.+.++-...++ -+...+.......++.
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~-dSevG~AL~---~GHPvYFV~F~p~P~pg-----------QTl~DV~~ae~~Fv~~ 131 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKP-DSEVGVALR---AGHPVYFVGFFPEPEPG-----------QTLEDVMRAEAAFVEE 131 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCc-ccHHHHHHH---cCCCeEEEEecCCCCCC-----------CcHHHHHHHHHHHHHH
Confidence 4567777643 4566654 234566665 69999999887422111 0222222222233444
Q ss_pred HHhC-C-CCcEEEEEeccCCcc
Q 031524 138 LKAN-G-SKKASINNLWNFNRL 157 (158)
Q Consensus 138 l~~~-~-~~~I~viG~S~GG~l 157 (158)
+..+ + ..|..|+|-|.||+.
T Consensus 132 V~~~hp~~~kp~liGnCQgGWa 153 (581)
T PF11339_consen 132 VAERHPDAPKPNLIGNCQGGWA 153 (581)
T ss_pred HHHhCCCCCCceEEeccHHHHH
Confidence 4443 3 459999999999975
No 189
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=88.80 E-value=2.5 Score=35.74 Aligned_cols=89 Identities=13% Similarity=0.102 Sum_probs=52.2
Q ss_pred CCEEEEEcccC---CCC--hHHHHHHHHHhhcC-CCcEEEeeecCC-CCCCCCHHHHHHHHcC--------CChhhHHHH
Q 031524 66 APGIVVVQEWW---GVD--FEIKNHAVKISQLN-PGFKALIPDLYR-GKVGLDTAEAQHLMSG--------LDWPGAVKD 130 (158)
Q Consensus 66 ~p~VIllHg~~---G~~--~~~~~~A~~La~l~-~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~--------~~~~~~~~d 130 (158)
+..|+.+-|.+ |-. ..+..+...|. + .|-.+++ ||. |-.....++......+ +.-....+.
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~--r~d~~~qv~--yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~n 106 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQ--RADGVTQVI--YYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQN 106 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHh--cCCCceEEE--EecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHH
Confidence 34566666643 222 24556677776 4 5667766 565 3322222211111111 111246788
Q ss_pred HHHHHHHHHhC--CCCcEEEEEeccCCccC
Q 031524 131 IHASVNWLKAN--GSKKASINNLWNFNRLA 158 (158)
Q Consensus 131 i~~av~~l~~~--~~~~I~viG~S~GG~lA 158 (158)
|..|..||..+ +.++|.++|||-|+..|
T Consensus 107 I~~AYrFL~~~yepGD~Iy~FGFSRGAf~a 136 (423)
T COG3673 107 IREAYRFLIFNYEPGDEIYAFGFSRGAFSA 136 (423)
T ss_pred HHHHHHHHHHhcCCCCeEEEeeccchhHHH
Confidence 99999999876 57899999999998753
No 190
>PLN02934 triacylglycerol lipase
Probab=87.82 E-value=0.37 Score=42.62 Aligned_cols=29 Identities=14% Similarity=0.033 Sum_probs=20.5
Q ss_pred HHHHHHHHHHh-CCCCcEEEEEeccCCccC
Q 031524 130 DIHASVNWLKA-NGSKKASINNLWNFNRLA 158 (158)
Q Consensus 130 di~~av~~l~~-~~~~~I~viG~S~GG~lA 158 (158)
.+...++.+.+ .+..+|.+.|||+||.+|
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALA 335 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALA 335 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHH
Confidence 35555555444 356689999999999875
No 191
>PLN02571 triacylglycerol lipase
Probab=87.49 E-value=0.28 Score=42.32 Aligned_cols=30 Identities=17% Similarity=0.006 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhC-C--CCcEEEEEeccCCccC
Q 031524 129 KDIHASVNWLKAN-G--SKKASINNLWNFNRLA 158 (158)
Q Consensus 129 ~di~~av~~l~~~-~--~~~I~viG~S~GG~lA 158 (158)
+++.+.++.+.+. + .-+|.|.|||+||.+|
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALA 240 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALA 240 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHH
Confidence 3444444444332 2 2369999999999875
No 192
>PLN02847 triacylglycerol lipase
Probab=87.28 E-value=1.1 Score=40.40 Aligned_cols=18 Identities=17% Similarity=-0.256 Sum_probs=14.7
Q ss_pred CCCCcEEEEEeccCCccC
Q 031524 141 NGSKKASINNLWNFNRLA 158 (158)
Q Consensus 141 ~~~~~I~viG~S~GG~lA 158 (158)
.+.-+|.++|||+||.+|
T Consensus 248 ~PdYkLVITGHSLGGGVA 265 (633)
T PLN02847 248 YPDFKIKIVGHSLGGGTA 265 (633)
T ss_pred CCCCeEEEeccChHHHHH
Confidence 345589999999999875
No 193
>PLN00413 triacylglycerol lipase
Probab=87.21 E-value=0.4 Score=42.11 Aligned_cols=28 Identities=18% Similarity=0.032 Sum_probs=19.5
Q ss_pred HHHHHHHH-HhCCCCcEEEEEeccCCccC
Q 031524 131 IHASVNWL-KANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 131 i~~av~~l-~~~~~~~I~viG~S~GG~lA 158 (158)
+...++.+ ++.+..+|.+.|||+||.+|
T Consensus 270 i~~~Lk~ll~~~p~~kliVTGHSLGGALA 298 (479)
T PLN00413 270 ILRHLKEIFDQNPTSKFILSGHSLGGALA 298 (479)
T ss_pred HHHHHHHHHHHCCCCeEEEEecCHHHHHH
Confidence 44444443 33456789999999999875
No 194
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=86.80 E-value=0.63 Score=36.54 Aligned_cols=60 Identities=12% Similarity=0.122 Sum_probs=37.0
Q ss_pred CCCcEEEeeecCC-C-C--CCCCHHHHHHHHcCCChhhHHHHHHHHHHHH-HhCC-CCcEEEEEeccCCcc
Q 031524 93 NPGFKALIPDLYR-G-K--VGLDTAEAQHLMSGLDWPGAVKDIHASVNWL-KANG-SKKASINNLWNFNRL 157 (158)
Q Consensus 93 ~~Gy~V~~~D~~g-G-~--~~~~~~~~~~~~~~~~~~~~~~di~~av~~l-~~~~-~~~I~viG~S~GG~l 157 (158)
+.-.+|++|-||- . . .....++... ..+-...|+..|+++. ++.. .+++.|+|||.|+.+
T Consensus 43 ~~~~~vfAP~YRQatl~~~~~~~~~~~~~-----a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~ 108 (207)
T PF11288_consen 43 NGVCNVFAPRYRQATLYAFLDTDREDAEK-----AFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMH 108 (207)
T ss_pred hcCCccccChhhcchhhhhhccCcchhHH-----HHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHH
Confidence 3557899998874 1 1 1011111111 1223568999999775 4443 568999999999864
No 195
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=86.77 E-value=9.4 Score=31.86 Aligned_cols=102 Identities=9% Similarity=-0.014 Sum_probs=64.1
Q ss_pred ceeEEEeeCCceEEEEEEcCC--CCCEEEEEcccCCCChH-HH-----HHHHHHhhcCCCcEEEeeecCC---CCCCCCH
Q 031524 44 FKKIQIQRDDTTFDAYVVGKE--DAPGIVVVQEWWGVDFE-IK-----NHAVKISQLNPGFKALIPDLYR---GKVGLDT 112 (158)
Q Consensus 44 ~~~i~i~~~~~~l~~~~~~p~--~~p~VIllHg~~G~~~~-~~-----~~A~~La~l~~Gy~V~~~D~~g---G~~~~~~ 112 (158)
.++-.+++..|.++..+.... ++|++|-+|++.=+... +. .-+..+. ++ |-++-+|-+| |... -+
T Consensus 22 ~~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~--~~-fcv~HV~~PGqe~gAp~-~p 97 (326)
T KOG2931|consen 22 CQEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEIL--EH-FCVYHVDAPGQEDGAPS-FP 97 (326)
T ss_pred ceeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHH--hh-eEEEecCCCccccCCcc-CC
Confidence 567788888888898888743 47899999997432211 11 2234444 45 9999999887 3211 01
Q ss_pred HHHHHHHcCCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCc
Q 031524 113 AEAQHLMSGLDWPGAVKDIHASVNWLKANGSKKASINNLWNFNR 156 (158)
Q Consensus 113 ~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~ 156 (158)
+ -......+...++|..+++++. -+.|.-+|--.|++
T Consensus 98 ~----~y~yPsmd~LAd~l~~VL~~f~---lk~vIg~GvGAGAy 134 (326)
T KOG2931|consen 98 E----GYPYPSMDDLADMLPEVLDHFG---LKSVIGMGVGAGAY 134 (326)
T ss_pred C----CCCCCCHHHHHHHHHHHHHhcC---cceEEEecccccHH
Confidence 0 0122356678889999999874 24555566555554
No 196
>PLN02162 triacylglycerol lipase
Probab=86.60 E-value=0.46 Score=41.64 Aligned_cols=29 Identities=21% Similarity=0.004 Sum_probs=19.9
Q ss_pred HHHHHHHH-HHhCCCCcEEEEEeccCCccC
Q 031524 130 DIHASVNW-LKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 130 di~~av~~-l~~~~~~~I~viG~S~GG~lA 158 (158)
.+...++. +.+.+..+|.+.|||+||.+|
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALA 292 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALA 292 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHH
Confidence 34444443 334456789999999999875
No 197
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=86.37 E-value=2 Score=35.33 Aligned_cols=100 Identities=9% Similarity=-0.038 Sum_probs=54.5
Q ss_pred EEeeCCceEEEEEEcCC--CCCEEEEEcccCCCChH-HH-----HHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHH
Q 031524 48 QIQRDDTTFDAYVVGKE--DAPGIVVVQEWWGVDFE-IK-----NHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHL 118 (158)
Q Consensus 48 ~i~~~~~~l~~~~~~p~--~~p~VIllHg~~G~~~~-~~-----~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~ 118 (158)
.++++-|.+..++.... ++|++|-+|+.+-+... +. .-++.+ .+.|.++-+|.+| ........+ -
T Consensus 3 ~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i---~~~f~i~Hi~aPGqe~ga~~~p~---~ 76 (283)
T PF03096_consen 3 DVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEI---LQNFCIYHIDAPGQEEGAATLPE---G 76 (283)
T ss_dssp EEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHH---HTTSEEEEEE-TTTSTT-----T---T
T ss_pred eeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHH---hhceEEEEEeCCCCCCCcccccc---c
Confidence 56788889999998864 48999999997532211 11 223334 3679999999998 221111100 0
Q ss_pred HcCCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCc
Q 031524 119 MSGLDWPGAVKDIHASVNWLKANGSKKASINNLWNFNR 156 (158)
Q Consensus 119 ~~~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~ 156 (158)
....+.++..+++..++++++= +.+.-+|--.|++
T Consensus 77 y~yPsmd~LAe~l~~Vl~~f~l---k~vIg~GvGAGAn 111 (283)
T PF03096_consen 77 YQYPSMDQLAEMLPEVLDHFGL---KSVIGFGVGAGAN 111 (283)
T ss_dssp -----HHHHHCTHHHHHHHHT------EEEEEETHHHH
T ss_pred ccccCHHHHHHHHHHHHHhCCc---cEEEEEeeccchh
Confidence 1223667788888899999853 4566666655554
No 198
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=86.36 E-value=4.9 Score=31.32 Aligned_cols=75 Identities=15% Similarity=0.185 Sum_probs=47.2
Q ss_pred EEEEcccCCCC-hHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCC--C-C
Q 031524 69 IVVVQEWWGVD-FEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANG--S-K 144 (158)
Q Consensus 69 VIllHg~~G~~-~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~--~-~ 144 (158)
+|++=||.|.. .++..+++... +.|+.++.+-..-. .+... .......++..++.+.+.. . .
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~--~~g~~il~~~~~~~----------~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~ 67 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQ--DPGFDILLVTSPPA----------DFFWP--SKRLAPAADKLLELLSDSQSASPP 67 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHH--hcCCeEEEEeCCHH----------HHeee--ccchHHHHHHHHHHhhhhccCCCC
Confidence 56777898776 47778899998 89999999754210 01000 0122233344555555432 2 3
Q ss_pred cEEEEEeccCCcc
Q 031524 145 KASINNLWNFNRL 157 (158)
Q Consensus 145 ~I~viG~S~GG~l 157 (158)
+|.+..||+||.+
T Consensus 68 ~il~H~FSnGG~~ 80 (240)
T PF05705_consen 68 PILFHSFSNGGSF 80 (240)
T ss_pred CEEEEEEECchHH
Confidence 8999999999864
No 199
>PLN02408 phospholipase A1
Probab=86.07 E-value=0.38 Score=40.89 Aligned_cols=30 Identities=17% Similarity=0.093 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhC-C--CCcEEEEEeccCCccC
Q 031524 129 KDIHASVNWLKAN-G--SKKASINNLWNFNRLA 158 (158)
Q Consensus 129 ~di~~av~~l~~~-~--~~~I~viG~S~GG~lA 158 (158)
+.+.+.++.+.+. + ..+|.|.|||+||.+|
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALA 214 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALA 214 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHH
Confidence 4444455554433 2 2369999999999875
No 200
>PLN02324 triacylglycerol lipase
Probab=85.52 E-value=0.56 Score=40.54 Aligned_cols=32 Identities=6% Similarity=-0.041 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHhC-C--CCcEEEEEeccCCccC
Q 031524 127 AVKDIHASVNWLKAN-G--SKKASINNLWNFNRLA 158 (158)
Q Consensus 127 ~~~di~~av~~l~~~-~--~~~I~viG~S~GG~lA 158 (158)
+.+.+...++.+.+. + .-+|.+.|||+||.+|
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALA 229 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMS 229 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHH
Confidence 444455556555543 2 2479999999999875
No 201
>PLN02719 triacylglycerol lipase
Probab=84.74 E-value=0.61 Score=41.32 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHhC-C-----CCcEEEEEeccCCccC
Q 031524 127 AVKDIHASVNWLKAN-G-----SKKASINNLWNFNRLA 158 (158)
Q Consensus 127 ~~~di~~av~~l~~~-~-----~~~I~viG~S~GG~lA 158 (158)
..+++.+.++.+.+. + ..+|.|.|||+||.+|
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALA 312 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALA 312 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHH
Confidence 344455555555443 1 2479999999999875
No 202
>PLN02802 triacylglycerol lipase
Probab=83.69 E-value=0.7 Score=40.90 Aligned_cols=30 Identities=13% Similarity=0.035 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhC-C--CCcEEEEEeccCCccC
Q 031524 129 KDIHASVNWLKAN-G--SKKASINNLWNFNRLA 158 (158)
Q Consensus 129 ~di~~av~~l~~~-~--~~~I~viG~S~GG~lA 158 (158)
+++...++.+.+. + ..+|.|.|||+||.+|
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALA 344 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALA 344 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHH
Confidence 4444455554443 2 2479999999999875
No 203
>PLN02753 triacylglycerol lipase
Probab=82.67 E-value=0.86 Score=40.51 Aligned_cols=31 Identities=19% Similarity=0.125 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHhC-C-----CCcEEEEEeccCCccC
Q 031524 128 VKDIHASVNWLKAN-G-----SKKASINNLWNFNRLA 158 (158)
Q Consensus 128 ~~di~~av~~l~~~-~-----~~~I~viG~S~GG~lA 158 (158)
.+.+...++.+.+. + .-+|.|.|||+||.+|
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALA 326 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALA 326 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHH
Confidence 34455555554432 1 3589999999999875
No 204
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=82.42 E-value=0.86 Score=34.63 Aligned_cols=30 Identities=7% Similarity=-0.043 Sum_probs=20.6
Q ss_pred HHHHHHHHHHH-HhCCCCcEEEEEeccCCcc
Q 031524 128 VKDIHASVNWL-KANGSKKASINNLWNFNRL 157 (158)
Q Consensus 128 ~~di~~av~~l-~~~~~~~I~viG~S~GG~l 157 (158)
..++...++.. .+-|..+|.++|||.|+.+
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V 94 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMV 94 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHH
Confidence 44555555443 3346789999999999865
No 205
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=81.62 E-value=14 Score=30.71 Aligned_cols=87 Identities=6% Similarity=-0.136 Sum_probs=41.9
Q ss_pred CCCCEEEEEcccCCCC-hHHHHHHHHHh-h-cCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHH-HHHHHHHHH
Q 031524 64 EDAPGIVVVQEWWGVD-FEIKNHAVKIS-Q-LNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKD-IHASVNWLK 139 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~-~~~~~~A~~La-~-l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~d-i~~av~~l~ 139 (158)
.+.|.++++||..-.+ ..+....+.|. + .-..-.++.+|+-. ..+..+... ..++..+. +.+.+=+++
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d------~~~R~~~~~--~n~~~~~~L~~eLlP~v~ 167 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYID------VKKRREELH--CNEAYWRFLAQELLPYVE 167 (299)
T ss_pred ccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCC------HHHHHHHhc--ccHHHHHHHHHHhhhhhh
Confidence 3689999999742111 11112222332 0 02346677776532 111111111 22222222 334556666
Q ss_pred hC-C----CCcEEEEEeccCCccC
Q 031524 140 AN-G----SKKASINNLWNFNRLA 158 (158)
Q Consensus 140 ~~-~----~~~I~viG~S~GG~lA 158 (158)
+. + .+.=.++|.|+||.++
T Consensus 168 ~~yp~~~~a~~r~L~G~SlGG~vs 191 (299)
T COG2382 168 ERYPTSADADGRVLAGDSLGGLVS 191 (299)
T ss_pred ccCcccccCCCcEEeccccccHHH
Confidence 55 1 4556699999999753
No 206
>PLN02761 lipase class 3 family protein
Probab=79.93 E-value=0.98 Score=40.14 Aligned_cols=31 Identities=16% Similarity=0.018 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHhC-------CCCcEEEEEeccCCccC
Q 031524 128 VKDIHASVNWLKAN-------GSKKASINNLWNFNRLA 158 (158)
Q Consensus 128 ~~di~~av~~l~~~-------~~~~I~viG~S~GG~lA 158 (158)
.+++...++.+.+. +.-+|.|.|||+||.+|
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALA 308 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLA 308 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHH
Confidence 34445555555432 13479999999999875
No 207
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=76.70 E-value=1.3 Score=36.99 Aligned_cols=28 Identities=14% Similarity=-0.055 Sum_probs=19.3
Q ss_pred HHHHHHHHHhC-CCCcEEEEEeccCCccC
Q 031524 131 IHASVNWLKAN-GSKKASINNLWNFNRLA 158 (158)
Q Consensus 131 i~~av~~l~~~-~~~~I~viG~S~GG~lA 158 (158)
+.+.++.|... +.-+|-+.|||+||.+|
T Consensus 157 ~~~~~~~L~~~~~~~~i~vTGHSLGgAlA 185 (336)
T KOG4569|consen 157 LDAELRRLIELYPNYSIWVTGHSLGGALA 185 (336)
T ss_pred HHHHHHHHHHhcCCcEEEEecCChHHHHH
Confidence 34444444443 35689999999999875
No 208
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=74.42 E-value=15 Score=33.61 Aligned_cols=79 Identities=10% Similarity=-0.095 Sum_probs=42.7
Q ss_pred CCEEEEEcccC---CCChHHHHHHHHHhhcCCC--cEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHH-
Q 031524 66 APGIVVVQEWW---GVDFEIKNHAVKISQLNPG--FKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLK- 139 (158)
Q Consensus 66 ~p~VIllHg~~---G~~~~~~~~A~~La~l~~G--y~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~- 139 (158)
.|.+|++|+.. -....++.+-.+|. ..| .-|-.+|+..+-.+ .+..+..+-+..+.++..
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~ls--l~gevvev~tfdl~n~igG------------~nI~h~ae~~vSf~r~kvl 241 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLS--LKGEVVEVPTFDLNNPIGG------------ANIKHAAEYSVSFDRYKVL 241 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHh--hhceeeeeccccccCCCCC------------cchHHHHHHHHHHhhhhhh
Confidence 57889999875 22345666666776 445 33445555431111 112222222333333221
Q ss_pred -hC---CCCcEEEEEeccCCccC
Q 031524 140 -AN---GSKKASINNLWNFNRLA 158 (158)
Q Consensus 140 -~~---~~~~I~viG~S~GG~lA 158 (158)
-. +..+|.++|+|||+.++
T Consensus 242 ei~gefpha~IiLvGrsmGAlVa 264 (784)
T KOG3253|consen 242 EITGEFPHAPIILVGRSMGALVA 264 (784)
T ss_pred hhhccCCCCceEEEecccCceee
Confidence 11 35789999999998764
No 209
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=74.09 E-value=34 Score=28.49 Aligned_cols=99 Identities=13% Similarity=-0.031 Sum_probs=49.7
Q ss_pred eEEEEEEc----CCCCCEEEEEcccCCCChHHHHHHH----H--------Hh----hcCCCcEEEeeecC-C-CCCCCCH
Q 031524 55 TFDAYVVG----KEDAPGIVVVQEWWGVDFEIKNHAV----K--------IS----QLNPGFKALIPDLY-R-GKVGLDT 112 (158)
Q Consensus 55 ~l~~~~~~----p~~~p~VIllHg~~G~~~~~~~~A~----~--------La----~l~~Gy~V~~~D~~-g-G~~~~~~ 112 (158)
.+.=|++. |++.|.||.+.|-.|....+-.+.+ + |. ....-.+++-+|-+ | |.+-...
T Consensus 25 ~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~ 104 (415)
T PF00450_consen 25 HLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGND 104 (415)
T ss_dssp EEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESS
T ss_pred EEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccc
Confidence 55544443 3567999999998776543211110 0 00 00122567777844 5 5542211
Q ss_pred HHHHHHHcCCChhhHHHHHHHHHH-HHHhCC---CCcEEEEEeccCCcc
Q 031524 113 AEAQHLMSGLDWPGAVKDIHASVN-WLKANG---SKKASINNLWNFNRL 157 (158)
Q Consensus 113 ~~~~~~~~~~~~~~~~~di~~av~-~l~~~~---~~~I~viG~S~GG~l 157 (158)
... ...+.++..+|+..+++ |+...+ ..++.|.|-|.||..
T Consensus 105 ~~~----~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~y 149 (415)
T PF00450_consen 105 PSD----YVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHY 149 (415)
T ss_dssp GGG----GS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHH
T ss_pred ccc----ccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEcccccccc
Confidence 110 11244556677666654 445544 458999999999964
No 210
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=73.19 E-value=62 Score=28.37 Aligned_cols=138 Identities=17% Similarity=0.048 Sum_probs=74.8
Q ss_pred hhHHhhhcCCCCCCccCCCCCCCcccccccccccCCCCceeEEEeeCC-ceEEE---EEEcCCCCCEEEEEcccCCC-Ch
Q 031524 6 SRILSRSTPLLKPSLARTHFPAGYRFAVRSMADSAASPFKKIQIQRDD-TTFDA---YVVGKEDAPGIVVVQEWWGV-DF 80 (158)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~-~~l~~---~~~~p~~~p~VIllHg~~G~-~~ 80 (158)
.-|+.|-...|-=|..-....++||+-+-...| .+....+. |++.= .+.+....|.|++.-|..-. +.
T Consensus 6 ~DI~~rL~aIpG~s~iee~p~~gyRffvl~y~Q-------PvDH~~P~~gtF~QRvtLlHk~~drPtV~~T~GY~~~~~p 78 (448)
T PF05576_consen 6 QDIKDRLLAIPGMSLIEEKPYDGYRFFVLRYTQ-------PVDHRHPEKGTFQQRVTLLHKDFDRPTVLYTEGYNVSTSP 78 (448)
T ss_pred HhHHHHHhcCCCceeeeccCCCceEEEEEeeec-------CCCCCCCCCCceEEEEEEEEcCCCCCeEEEecCcccccCc
Confidence 345555555554444333444577765422222 22332322 23322 22233457999999886543 22
Q ss_pred HHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 81 EIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 81 ~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
...+..+-| +.....+=--|++...+. +. ...+++.++...|...+++.+|.-..++..-.|.|=||..+
T Consensus 79 ~r~Ept~Ll---d~NQl~vEhRfF~~SrP~-p~----DW~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa 148 (448)
T PF05576_consen 79 RRSEPTQLL---DGNQLSVEHRFFGPSRPE-PA----DWSYLTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTA 148 (448)
T ss_pred cccchhHhh---ccceEEEEEeeccCCCCC-CC----CcccccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeE
Confidence 333444444 333333333333422211 10 12346777889999999999988777889999999999753
No 211
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=72.90 E-value=3.4 Score=33.55 Aligned_cols=32 Identities=13% Similarity=0.049 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHhC--CCCcEEEEEeccCCccC
Q 031524 127 AVKDIHASVNWLKAN--GSKKASINNLWNFNRLA 158 (158)
Q Consensus 127 ~~~di~~av~~l~~~--~~~~I~viG~S~GG~lA 158 (158)
+.+.|..+..++.+. +.++|.++|||-|+..|
T Consensus 73 ~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~A 106 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTA 106 (277)
T ss_pred hHHHHHHHHHHHHhccCCcceEEEEecCccHHHH
Confidence 456788888888665 47889999999998754
No 212
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=71.60 E-value=6.5 Score=31.09 Aligned_cols=30 Identities=13% Similarity=0.042 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 128 VKDIHASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 128 ~~di~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
++.+.++++.... ..+++.|+|||.|+.++
T Consensus 33 ~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va 62 (225)
T PF08237_consen 33 VANLDAAIRAAIA-AGGPVVVFGYSQGAVVA 62 (225)
T ss_pred HHHHHHHHHhhcc-CCCCEEEEEECHHHHHH
Confidence 3444444443222 36889999999998653
No 213
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=71.27 E-value=11 Score=26.67 Aligned_cols=37 Identities=16% Similarity=0.259 Sum_probs=18.1
Q ss_pred EEEeeCCceEEEEEEcCC--CCCEEEEEcccCCCChHHH
Q 031524 47 IQIQRDDTTFDAYVVGKE--DAPGIVVVQEWWGVDFEIK 83 (158)
Q Consensus 47 i~i~~~~~~l~~~~~~p~--~~p~VIllHg~~G~~~~~~ 83 (158)
++.+.++..++-....+. +...+|++|||.|+--++.
T Consensus 71 f~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~ 109 (112)
T PF06441_consen 71 FKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFL 109 (112)
T ss_dssp EEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGH
T ss_pred eeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHH
Confidence 333334556666665542 3457999999999765543
No 214
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=71.26 E-value=39 Score=25.01 Aligned_cols=77 Identities=19% Similarity=0.198 Sum_probs=49.3
Q ss_pred CCCCEEEEE-cccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHH-c-CC-------ChhhHHHHHHH
Q 031524 64 EDAPGIVVV-QEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLM-S-GL-------DWPGAVKDIHA 133 (158)
Q Consensus 64 ~~~p~VIll-Hg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~-~-~~-------~~~~~~~di~~ 133 (158)
+.+|.|++. -|.-|++.-..-+++.|+ +.||.|+..-.+ + .++++.... + .. -......++..
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~--d~GfeVi~~g~~---~--tp~e~v~aA~~~dv~vIgvSsl~g~h~~l~~~ 82 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALA--DAGFEVINLGLF---Q--TPEEAVRAAVEEDVDVIGVSSLDGGHLTLVPG 82 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHH--hCCceEEecCCc---C--CHHHHHHHHHhcCCCEEEEEeccchHHHHHHH
Confidence 356766665 477788877888999999 999999975332 1 234432221 1 11 11234566778
Q ss_pred HHHHHHhCCCCcEE
Q 031524 134 SVNWLKANGSKKAS 147 (158)
Q Consensus 134 av~~l~~~~~~~I~ 147 (158)
+++.+++.+.+.|-
T Consensus 83 lve~lre~G~~~i~ 96 (143)
T COG2185 83 LVEALREAGVEDIL 96 (143)
T ss_pred HHHHHHHhCCcceE
Confidence 88888888766666
No 215
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=70.76 E-value=3.2 Score=34.64 Aligned_cols=17 Identities=6% Similarity=-0.146 Sum_probs=14.7
Q ss_pred CCCcEEEEEeccCCccC
Q 031524 142 GSKKASINNLWNFNRLA 158 (158)
Q Consensus 142 ~~~~I~viG~S~GG~lA 158 (158)
+..+|-+.|||+||.+|
T Consensus 274 pda~iwlTGHSLGGa~A 290 (425)
T COG5153 274 PDARIWLTGHSLGGAIA 290 (425)
T ss_pred CCceEEEeccccchHHH
Confidence 46799999999999875
No 216
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=70.76 E-value=3.2 Score=34.64 Aligned_cols=17 Identities=6% Similarity=-0.146 Sum_probs=14.7
Q ss_pred CCCcEEEEEeccCCccC
Q 031524 142 GSKKASINNLWNFNRLA 158 (158)
Q Consensus 142 ~~~~I~viG~S~GG~lA 158 (158)
+..+|-+.|||+||.+|
T Consensus 274 pda~iwlTGHSLGGa~A 290 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIA 290 (425)
T ss_pred CCceEEEeccccchHHH
Confidence 46799999999999875
No 217
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=66.17 E-value=7.9 Score=29.57 Aligned_cols=30 Identities=7% Similarity=-0.011 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhC--CCCcEEEEEeccCCcc
Q 031524 128 VKDIHASVNWLKAN--GSKKASINNLWNFNRL 157 (158)
Q Consensus 128 ~~di~~av~~l~~~--~~~~I~viG~S~GG~l 157 (158)
..++...++-|+.. +..++-++|||+|..+
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v 122 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTV 122 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHH
Confidence 44555555555443 3568999999999764
No 218
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=65.99 E-value=45 Score=26.90 Aligned_cols=15 Identities=7% Similarity=-0.159 Sum_probs=13.5
Q ss_pred CCcEEEEEeccCCcc
Q 031524 143 SKKASINNLWNFNRL 157 (158)
Q Consensus 143 ~~~I~viG~S~GG~l 157 (158)
...|.++-||.||.+
T Consensus 189 ~~sv~vvahsyGG~~ 203 (297)
T KOG3967|consen 189 AESVFVVAHSYGGSL 203 (297)
T ss_pred cceEEEEEeccCChh
Confidence 678999999999975
No 219
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=63.61 E-value=11 Score=27.39 Aligned_cols=45 Identities=13% Similarity=0.271 Sum_probs=28.9
Q ss_pred EEEEcC-CCCCEEEEEcccCCCChHH--HHHHHHHhhcCCCcEEEeeecC
Q 031524 58 AYVVGK-EDAPGIVVVQEWWGVDFEI--KNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 58 ~~~~~p-~~~p~VIllHg~~G~~~~~--~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
+++..+ .++|.|+-+|||.|....+ +-+|+.|- ..|...=.+..|
T Consensus 43 ~~l~~~~p~KpLVlSfHG~tGtGKn~v~~liA~~ly--~~G~~S~~V~~f 90 (127)
T PF06309_consen 43 GHLANPNPRKPLVLSFHGWTGTGKNFVSRLIAEHLY--KSGMKSPFVHQF 90 (127)
T ss_pred HHHcCCCCCCCEEEEeecCCCCcHHHHHHHHHHHHH--hcccCCCceeee
Confidence 344333 3468999999999997543 45677766 667554444444
No 220
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=62.66 E-value=8.2 Score=34.46 Aligned_cols=28 Identities=11% Similarity=0.221 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhC------CCCcEEEEEeccCCc
Q 031524 129 KDIHASVNWLKAN------GSKKASINNLWNFNR 156 (158)
Q Consensus 129 ~di~~av~~l~~~------~~~~I~viG~S~GG~ 156 (158)
-|..-|++|++++ ++.+|.++|-|.|+.
T Consensus 197 ~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaA 230 (601)
T KOG4389|consen 197 LDQQLALQWVQENIAAFGGNPSRVTLFGESAGAA 230 (601)
T ss_pred HHHHHHHHHHHHhHHHhCCCcceEEEeccccchh
Confidence 4555688999886 278999999999975
No 221
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=62.48 E-value=16 Score=28.10 Aligned_cols=48 Identities=17% Similarity=0.228 Sum_probs=37.5
Q ss_pred ceEEEEEEcCC------CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 54 TTFDAYVVGKE------DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 54 ~~l~~~~~~p~------~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
..+.+.+..|. +.|.+++.|++.+........+..++ +.+|.++..+.
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~l~--~~~~~~~~~~~ 84 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSLGYAVLLA--EKGYRVLAGDA 84 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcchHHHHhh--hceeEEeeecc
Confidence 34566666552 47899999999888776666889999 89999999876
No 222
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=61.16 E-value=7.3 Score=30.71 Aligned_cols=15 Identities=0% Similarity=-0.370 Sum_probs=11.6
Q ss_pred CCcEEEEEeccCCcc
Q 031524 143 SKKASINNLWNFNRL 157 (158)
Q Consensus 143 ~~~I~viG~S~GG~l 157 (158)
.++|-||+||||-.+
T Consensus 56 y~~i~lvAWSmGVw~ 70 (213)
T PF04301_consen 56 YREIYLVAWSMGVWA 70 (213)
T ss_pred CceEEEEEEeHHHHH
Confidence 468889999998554
No 223
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=60.80 E-value=13 Score=30.92 Aligned_cols=33 Identities=12% Similarity=0.182 Sum_probs=26.7
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
||++|. +...+++.+|+.|+ ++|+.|.++-..+
T Consensus 2 il~~~~--~~p~~~~~la~~L~--~~G~~v~~~~~~~ 34 (396)
T cd03818 2 ILFVHQ--NFPGQFRHLAPALA--AQGHEVVFLTEPN 34 (396)
T ss_pred EEEECC--CCchhHHHHHHHHH--HCCCEEEEEecCC
Confidence 788996 44567889999999 8999999876554
No 224
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=58.20 E-value=12 Score=31.75 Aligned_cols=16 Identities=13% Similarity=0.092 Sum_probs=13.5
Q ss_pred CCCcEEEEEeccCCcc
Q 031524 142 GSKKASINNLWNFNRL 157 (158)
Q Consensus 142 ~~~~I~viG~S~GG~l 157 (158)
+.++|-+||||+|+.+
T Consensus 218 G~RpVtLvG~SLGarv 233 (345)
T PF05277_consen 218 GERPVTLVGHSLGARV 233 (345)
T ss_pred CCCceEEEeecccHHH
Confidence 4678999999999864
No 225
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=55.51 E-value=1.4e+02 Score=25.94 Aligned_cols=29 Identities=17% Similarity=0.186 Sum_probs=19.8
Q ss_pred HHHHHHH-HHHHhCC---CCcEEEEEeccCCcc
Q 031524 129 KDIHASV-NWLKANG---SKKASINNLWNFNRL 157 (158)
Q Consensus 129 ~di~~av-~~l~~~~---~~~I~viG~S~GG~l 157 (158)
+|+..++ .|+...+ ..++.|.|-|.||..
T Consensus 146 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~y 178 (433)
T PLN03016 146 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMI 178 (433)
T ss_pred HHHHHHHHHHHHhChhhcCCCEEEEccCcccee
Confidence 4554443 4454444 567999999999975
No 226
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=53.34 E-value=40 Score=30.07 Aligned_cols=88 Identities=11% Similarity=-0.012 Sum_probs=55.6
Q ss_pred CCCEEEEEcccCCCC--------hHHHHHHHHHhhcCCCcEEEeeecCC-CCC-CCCHHHHHHHHcCCChhhHHHHHHHH
Q 031524 65 DAPGIVVVQEWWGVD--------FEIKNHAVKISQLNPGFKALIPDLYR-GKV-GLDTAEAQHLMSGLDWPGAVKDIHAS 134 (158)
Q Consensus 65 ~~p~VIllHg~~G~~--------~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~-~~~~~~~~~~~~~~~~~~~~~di~~a 134 (158)
..|.-|+|-|-+..+ ..+..+|. +.|-.|+..+.|= |.+ +.......+ +..+.-.+.+.|+...
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Ak-----kfgA~v~~lEHRFYG~S~P~~~~st~n-lk~LSs~QALaDla~f 158 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAK-----KFGATVFQLEHRFYGQSSPIGDLSTSN-LKYLSSLQALADLAEF 158 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHH-----HhCCeeEEeeeeccccCCCCCCCcccc-hhhhhHHHHHHHHHHH
Confidence 357777777633222 24445554 6688899998873 533 211111111 3345667888999999
Q ss_pred HHHHHhCC----CCcEEEEEeccCCccC
Q 031524 135 VNWLKANG----SKKASINNLWNFNRLA 158 (158)
Q Consensus 135 v~~l~~~~----~~~I~viG~S~GG~lA 158 (158)
|+.+..+. ..++..+|-|.-|.++
T Consensus 159 I~~~n~k~n~~~~~~WitFGgSYsGsLs 186 (514)
T KOG2182|consen 159 IKAMNAKFNFSDDSKWITFGGSYSGSLS 186 (514)
T ss_pred HHHHHhhcCCCCCCCeEEECCCchhHHH
Confidence 99987762 2389999999988763
No 227
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=52.59 E-value=15 Score=33.50 Aligned_cols=31 Identities=16% Similarity=-0.003 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhCC---CCcEEEEEeccCCccC
Q 031524 128 VKDIHASVNWLKANG---SKKASINNLWNFNRLA 158 (158)
Q Consensus 128 ~~di~~av~~l~~~~---~~~I~viG~S~GG~lA 158 (158)
........+.+.+.+ .++|.-|||||||.++
T Consensus 507 ~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~ 540 (697)
T KOG2029|consen 507 AARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLA 540 (697)
T ss_pred HHHHHHHHHHHHHhccCCCCceEEEecccchHHH
Confidence 344445566666553 5678889999999764
No 228
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=51.42 E-value=84 Score=26.37 Aligned_cols=30 Identities=17% Similarity=0.242 Sum_probs=24.3
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecC
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
-|.|++..|.++ .-++|+ +.||+|+-.|+-
T Consensus 252 vPmi~fakG~g~-------~Le~l~--~tG~DVvgLDWT 281 (359)
T KOG2872|consen 252 VPMILFAKGSGG-------ALEELA--QTGYDVVGLDWT 281 (359)
T ss_pred CceEEEEcCcch-------HHHHHH--hcCCcEEeeccc
Confidence 488899887555 556888 899999999984
No 229
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=51.30 E-value=50 Score=24.94 Aligned_cols=59 Identities=15% Similarity=0.274 Sum_probs=38.1
Q ss_pred CCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC--CCCcEEEEEeccC
Q 031524 77 GVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN--GSKKASINNLWNF 154 (158)
Q Consensus 77 G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~--~~~~I~viG~S~G 154 (158)
+..+..+.+.+.+++ ..|+.+.+|.|-++.++ -+..+++|+... ..+++++++-|.|
T Consensus 53 ~~p~~v~~~~~~i~~-aD~li~~tPeYn~s~pg--------------------~lKnaiD~l~~~~~~~Kpv~~~~~s~g 111 (184)
T COG0431 53 GLPPAVQALREAIAA-ADGLIIATPEYNGSYPG--------------------ALKNAIDWLSREALGGKPVLLLGTSGG 111 (184)
T ss_pred cCCHHHHHHHHHHHh-CCEEEEECCccCCCCCH--------------------HHHHHHHhCCHhHhCCCcEEEEecCCC
Confidence 455667777776653 67888888888766553 134456666333 2567788888877
Q ss_pred Cc
Q 031524 155 NR 156 (158)
Q Consensus 155 G~ 156 (158)
+.
T Consensus 112 ~~ 113 (184)
T COG0431 112 GA 113 (184)
T ss_pred ch
Confidence 53
No 230
>PRK06490 glutamine amidotransferase; Provisional
Probab=50.41 E-value=40 Score=26.72 Aligned_cols=83 Identities=7% Similarity=-0.026 Sum_probs=40.6
Q ss_pred CEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCC-CCCHHHHHHH--Hc----CCChhhHHHHHHHHHHHHH
Q 031524 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKV-GLDTAEAQHL--MS----GLDWPGAVKDIHASVNWLK 139 (158)
Q Consensus 67 p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~-~~~~~~~~~~--~~----~~~~~~~~~di~~av~~l~ 139 (158)
..+|+.|--.+... .+.+.|. +.|+.+-..+.+.+.. +.+.++...+ .+ -.+...+..++.+.++.+.
T Consensus 9 ~vlvi~h~~~~~~g---~l~~~l~--~~g~~~~v~~~~~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~~ 83 (239)
T PRK06490 9 PVLIVLHQERSTPG---RVGQLLQ--ERGYPLDIRRPRLGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISVPL 83 (239)
T ss_pred eEEEEecCCCCCCh---HHHHHHH--HCCCceEEEeccCCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHHHH
Confidence 35555674333333 4677777 7788877776553321 1111110000 01 1122234454444454433
Q ss_pred hCCCCcEEEEEeccCCcc
Q 031524 140 ANGSKKASINNLWNFNRL 157 (158)
Q Consensus 140 ~~~~~~I~viG~S~GG~l 157 (158)
. .++=++|.|+|..+
T Consensus 84 ~---~~~PvLGIC~G~Ql 98 (239)
T PRK06490 84 K---ENKPFLGICLGAQM 98 (239)
T ss_pred H---CCCCEEEECHhHHH
Confidence 3 34569999999653
No 231
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=47.45 E-value=14 Score=31.88 Aligned_cols=31 Identities=19% Similarity=-0.112 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHhC-C--C--CcEEEEEeccCCccC
Q 031524 128 VKDIHASVNWLKAN-G--S--KKASINNLWNFNRLA 158 (158)
Q Consensus 128 ~~di~~av~~l~~~-~--~--~~I~viG~S~GG~lA 158 (158)
+.|+..|+.++++. + . -++..+|.|.||.+|
T Consensus 163 AiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla 198 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLA 198 (403)
T ss_pred HHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHH
Confidence 45666677777665 2 3 388999999999875
No 232
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=46.42 E-value=52 Score=26.18 Aligned_cols=39 Identities=10% Similarity=0.064 Sum_probs=30.4
Q ss_pred CCCEEEEEcccCCCC---hHHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 65 DAPGIVVVQEWWGVD---FEIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 65 ~~p~VIllHg~~G~~---~~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
+.+.|.+|+-..+.. .+.......|+ +.|+.+.-.++..
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~--~lg~~v~~L~l~~ 72 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALA--KLGLEVSELHLSK 72 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHH--HcCCeeeeeeccC
Confidence 467999999765553 36677888999 8999999988753
No 233
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=46.11 E-value=52 Score=25.64 Aligned_cols=37 Identities=11% Similarity=0.115 Sum_probs=29.4
Q ss_pred CCCEEEEEcccCCCChHH--HHHHHHHhhcCCCcEEEeeec
Q 031524 65 DAPGIVVVQEWWGVDFEI--KNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~--~~~A~~La~l~~Gy~V~~~D~ 103 (158)
..|.+|.+.|..|..... ..+.+.|. +.||.|+..|=
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~--~~G~~~y~LDG 59 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLF--AKGYHVYLLDG 59 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHH--HcCCeEEEecC
Confidence 357999999998886543 35677888 89999999873
No 234
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=45.25 E-value=37 Score=25.03 Aligned_cols=35 Identities=11% Similarity=0.243 Sum_probs=23.6
Q ss_pred CCCEEEEEcccC--CCC-----------hHH-----------HHHHHHHhhcCCCcEEEee
Q 031524 65 DAPGIVVVQEWW--GVD-----------FEI-----------KNHAVKISQLNPGFKALIP 101 (158)
Q Consensus 65 ~~p~VIllHg~~--G~~-----------~~~-----------~~~A~~La~l~~Gy~V~~~ 101 (158)
++..|||+||-+ ++. +++ .....+|. +.||.|+++
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~--~~GwrvlvV 114 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQ--QLGWRVLVV 114 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHH--HcCCeEEEE
Confidence 467899999943 321 222 23566888 889999986
No 235
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=44.62 E-value=76 Score=25.01 Aligned_cols=26 Identities=8% Similarity=0.224 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHhC-------CCCcEEEEEeccCC
Q 031524 129 KDIHASVNWLKAN-------GSKKASINNLWNFN 155 (158)
Q Consensus 129 ~di~~av~~l~~~-------~~~~I~viG~S~GG 155 (158)
.-+..+++|+... ..+.++++|.| ||
T Consensus 107 g~LKNaiDwls~~~~~~~~~~~KpvaivgaS-gg 139 (219)
T TIGR02690 107 GSQKDQIDWIPLSVGPVRPTQGKTLAVMQVS-GG 139 (219)
T ss_pred HHHHHHHHhcccCcccccccCCCcEEEEEeC-Cc
Confidence 3355688888542 14779999999 54
No 236
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=44.18 E-value=23 Score=28.65 Aligned_cols=34 Identities=12% Similarity=0.082 Sum_probs=26.9
Q ss_pred CEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeee
Q 031524 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 67 p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D 102 (158)
..||++|+.......+..+...|. ++||..+.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk--~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIK--EKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHH--HCCCEEEeHH
Confidence 468999986554566778889999 9999988764
No 237
>PF03283 PAE: Pectinacetylesterase
Probab=42.75 E-value=21 Score=30.23 Aligned_cols=29 Identities=17% Similarity=0.119 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhCC---CCcEEEEEeccCCc
Q 031524 128 VKDIHASVNWLKANG---SKKASINNLWNFNR 156 (158)
Q Consensus 128 ~~di~~av~~l~~~~---~~~I~viG~S~GG~ 156 (158)
...+.+++++|...+ .++|.|.|.|.||.
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~ 168 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGL 168 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHH
Confidence 355778888887762 68999999999996
No 238
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=42.58 E-value=1.1e+02 Score=23.50 Aligned_cols=38 Identities=13% Similarity=0.099 Sum_probs=28.5
Q ss_pred CCCEEEEEcccCCCC-hHHHHHHHHHhhcCC-CcEEEeeecC
Q 031524 65 DAPGIVVVQEWWGVD-FEIKNHAVKISQLNP-GFKALIPDLY 104 (158)
Q Consensus 65 ~~p~VIllHg~~G~~-~~~~~~A~~La~l~~-Gy~V~~~D~~ 104 (158)
+.+.|++++-..+.. ++...+.+.|. +. |+.+...+..
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~--~l~G~~~~~~~~~ 69 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFE--SLRGVEVSHLHLF 69 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHh--hccCcEEEEEecc
Confidence 467899998655543 45667788888 88 9999988754
No 239
>TIGR03623 probable DNA repair protein. Members of this protein family are bacterial proteins of about 900 amino acids in length. Members show extended homology to proteins in TIGR02786, the AddB protein of double-strand break repair via homologous recombination. Members of this family, therefore, may be DNA repair proteins.
Probab=42.53 E-value=96 Score=29.26 Aligned_cols=34 Identities=6% Similarity=0.090 Sum_probs=29.2
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEe
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALI 100 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~ 100 (158)
..|..|++.|+.+.++....+-+.|. +.|..|..
T Consensus 160 ~~~~~i~l~GF~~~tP~q~~l~~~l~--~~~~~v~~ 193 (874)
T TIGR03623 160 RLPKQIILAGFDELTPQQQALLAALE--ARGVDVQQ 193 (874)
T ss_pred CCCccEEEEecCCCCHHHHHHHHHHH--HcCceeEe
Confidence 36888999999999999999999998 88888744
No 240
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=42.02 E-value=45 Score=27.13 Aligned_cols=37 Identities=14% Similarity=0.067 Sum_probs=30.6
Q ss_pred CCCEEEEEcccCCC--ChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 65 DAPGIVVVQEWWGV--DFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 65 ~~p~VIllHg~~G~--~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
+.|+||++.|+-+. ...+..+...|- -+|+.|.++.-
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lD--PRg~~V~s~~~ 92 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVN--PQGCQVTSFKA 92 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcC--CCeeEEEeCCC
Confidence 46999999999655 467888999998 89999999754
No 241
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=41.85 E-value=1.2e+02 Score=27.44 Aligned_cols=62 Identities=10% Similarity=0.052 Sum_probs=42.3
Q ss_pred CCEEEEEcccCCCC---hHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC
Q 031524 66 APGIVVVQEWWGVD---FEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN 141 (158)
Q Consensus 66 ~p~VIllHg~~G~~---~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~ 141 (158)
...++++||-...+ ++...+.+.|. .+|..|-..=|.+ +..-.. .++..+-+..+++|++++
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~--~~g~~~~~~~~p~e~H~~~~------------~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALK--RKGKPVELVVFPDEGHGFSR------------PENRVKVLKEILDWFKRH 616 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHH--HcCceEEEEEeCCCCcCCCC------------chhHHHHHHHHHHHHHHH
Confidence 56799999875543 45667888898 8999999988876 433221 223445566777777654
No 242
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=41.48 E-value=1.3e+02 Score=26.92 Aligned_cols=97 Identities=14% Similarity=-0.002 Sum_probs=50.3
Q ss_pred EEEEEEcC----CCCCEEEEEcccCCCChHHHHHHH----HHh------------hcCCCcEEEeee-cCC-CCCCCCHH
Q 031524 56 FDAYVVGK----EDAPGIVVVQEWWGVDFEIKNHAV----KIS------------QLNPGFKALIPD-LYR-GKVGLDTA 113 (158)
Q Consensus 56 l~~~~~~p----~~~p~VIllHg~~G~~~~~~~~A~----~La------------~l~~Gy~V~~~D-~~g-G~~~~~~~ 113 (158)
+..|.+.+ .++|.++.+.|..|....+..+.. ++. .+-.--.++-+| ..| |.+-+..+
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~ 166 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGD 166 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCccccccc
Confidence 55666653 358999999987776543322211 110 000012455666 445 65532111
Q ss_pred HHHHHHcCCChhhHHHHHHHHHHHH----HhCC--CCcEEEEEeccCCcc
Q 031524 114 EAQHLMSGLDWPGAVKDIHASVNWL----KANG--SKKASINNLWNFNRL 157 (158)
Q Consensus 114 ~~~~~~~~~~~~~~~~di~~av~~l----~~~~--~~~I~viG~S~GG~l 157 (158)
+. ..+.....+|+..+.+.+ -+.. ..+..|+|-|.||..
T Consensus 167 e~-----~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~y 211 (498)
T COG2939 167 EK-----KKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHY 211 (498)
T ss_pred cc-----ccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchh
Confidence 11 123344445655554433 2222 348899999999964
No 243
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=40.65 E-value=47 Score=24.30 Aligned_cols=33 Identities=30% Similarity=0.214 Sum_probs=23.0
Q ss_pred EEEcccCCCCh--HHHHHHHHHhhcCCCcEEEeeecC
Q 031524 70 VVVQEWWGVDF--EIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 70 IllHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
.+.++-+|... -...+|..|+ +.|+.|+.+|.-
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la--~~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALA--RKGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHH--HTTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhccc--cccccccccccC
Confidence 34444455554 3457899999 899999999984
No 244
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=40.45 E-value=36 Score=27.79 Aligned_cols=32 Identities=13% Similarity=0.228 Sum_probs=23.8
Q ss_pred EEEEcc---cCCCChHHHHHHHHHhhcCCCcEEEeee
Q 031524 69 IVVVQE---WWGVDFEIKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 69 VIllHg---~~G~~~~~~~~A~~La~l~~Gy~V~~~D 102 (158)
|+++|- .+|....+..+|+.|+ ++|+.|.++=
T Consensus 3 Il~~~~~~~~gG~e~~~~~la~~L~--~~G~~V~v~~ 37 (392)
T cd03805 3 VAFIHPDLGIGGAERLVVDAALALQ--SRGHEVTIYT 37 (392)
T ss_pred EEEECCCCCCchHHHHHHHHHHHHH--hCCCeEEEEc
Confidence 556663 3455567789999999 9999998764
No 245
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=39.81 E-value=34 Score=26.63 Aligned_cols=35 Identities=9% Similarity=0.071 Sum_probs=26.3
Q ss_pred CCEEEEEcccCCC-ChHHHHHHHHHhhcCCCcEEEeee
Q 031524 66 APGIVVVQEWWGV-DFEIKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 66 ~p~VIllHg~~G~-~~~~~~~A~~La~l~~Gy~V~~~D 102 (158)
...||++|+.... .+.+..+...|. ++||..+.++
T Consensus 186 ~g~IiLlHd~~~~t~~aL~~ii~~lk--~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEALDKIIKDLK--EQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHH--HCCCEEEEhH
Confidence 3579999985332 356778889998 9999988763
No 246
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=39.34 E-value=16 Score=29.88 Aligned_cols=23 Identities=17% Similarity=0.011 Sum_probs=17.8
Q ss_pred HHHHHHHhCCCCcEEEEEeccCC
Q 031524 133 ASVNWLKANGSKKASINNLWNFN 155 (158)
Q Consensus 133 ~av~~l~~~~~~~I~viG~S~GG 155 (158)
+..+.+++.+..+-.++|||+|=
T Consensus 73 al~~~l~~~Gi~P~~v~GhSlGE 95 (318)
T PF00698_consen 73 ALARLLRSWGIKPDAVIGHSLGE 95 (318)
T ss_dssp HHHHHHHHTTHCESEEEESTTHH
T ss_pred hhhhhhcccccccceeeccchhh
Confidence 45677777776788899999983
No 247
>PLN02335 anthranilate synthase
Probab=39.29 E-value=1e+02 Score=24.00 Aligned_cols=35 Identities=14% Similarity=0.064 Sum_probs=24.8
Q ss_pred CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 64 EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
+..+.|++++- .......++++|. +.|+.+....+
T Consensus 16 ~~~~~ilviD~---~dsft~~i~~~L~--~~g~~~~v~~~ 50 (222)
T PLN02335 16 KQNGPIIVIDN---YDSFTYNLCQYMG--ELGCHFEVYRN 50 (222)
T ss_pred CccCcEEEEEC---CCCHHHHHHHHHH--HCCCcEEEEEC
Confidence 34678888863 2334456899999 88998888754
No 248
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=39.20 E-value=34 Score=30.86 Aligned_cols=18 Identities=11% Similarity=0.200 Sum_probs=15.0
Q ss_pred hCCCCcEEEEEeccCCcc
Q 031524 140 ANGSKKASINNLWNFNRL 157 (158)
Q Consensus 140 ~~~~~~I~viG~S~GG~l 157 (158)
.++.++|-++|||+|+.+
T Consensus 443 ~qG~RPVTLVGFSLGARv 460 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARV 460 (633)
T ss_pred ccCCCceeEeeeccchHH
Confidence 346789999999999864
No 249
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=39.05 E-value=26 Score=26.29 Aligned_cols=34 Identities=9% Similarity=0.102 Sum_probs=24.0
Q ss_pred CEEEEEcccCC---CChHHHHHHHHHhhcCCCcEEEeee
Q 031524 67 PGIVVVQEWWG---VDFEIKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 67 p~VIllHg~~G---~~~~~~~~A~~La~l~~Gy~V~~~D 102 (158)
..||++|+... ..+.+..+...|. ++||..+.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~--~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLK--EKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHH--HCCCEEEEHH
Confidence 46999995222 2245677888888 9999988763
No 250
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=38.95 E-value=55 Score=32.95 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=45.0
Q ss_pred CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHH-HHHHHHh-C
Q 031524 64 EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHA-SVNWLKA-N 141 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~-av~~l~~-~ 141 (158)
...|.+.++|.+-|....+..+|.+|. - -.+.+-+- ...+ . .-++++.+ -++.+++ +
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle--~---PaYglQ~T-~~vP--------------~-dSies~A~~yirqirkvQ 2179 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE--I---PAYGLQCT-EAVP--------------L-DSIESLAAYYIRQIRKVQ 2179 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC--C---cchhhhcc-ccCC--------------c-chHHHHHHHHHHHHHhcC
Confidence 346899999999999988888888886 2 11111110 0111 1 11222222 2455554 3
Q ss_pred CCCcEEEEEeccCCccC
Q 031524 142 GSKKASINNLWNFNRLA 158 (158)
Q Consensus 142 ~~~~I~viG~S~GG~lA 158 (158)
|.++.-++|||+|+.++
T Consensus 2180 P~GPYrl~GYSyG~~l~ 2196 (2376)
T KOG1202|consen 2180 PEGPYRLAGYSYGACLA 2196 (2376)
T ss_pred CCCCeeeeccchhHHHH
Confidence 67899999999998653
No 251
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=38.72 E-value=1.1e+02 Score=25.27 Aligned_cols=82 Identities=12% Similarity=-0.043 Sum_probs=41.6
Q ss_pred EEEEEcccCCCChHH-HHHHHHHhhcCCCc-------EEEeeecCC--CC-CCCCHHHHHHHHcCCChhhHHHHHHHHHH
Q 031524 68 GIVVVQEWWGVDFEI-KNHAVKISQLNPGF-------KALIPDLYR--GK-VGLDTAEAQHLMSGLDWPGAVKDIHASVN 136 (158)
Q Consensus 68 ~VIllHg~~G~~~~~-~~~A~~La~l~~Gy-------~V~~~D~~g--G~-~~~~~~~~~~~~~~~~~~~~~~di~~av~ 136 (158)
.-|++.|.+.-.-.. +.+...+. +.|. +++++|-.| -. .....+....+....+. ....++.++++
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~--~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~-~~~~~L~e~i~ 102 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMV--REGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEE-KEGKSLLEVVK 102 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHH--HcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCc-ccCCCHHHHHH
Confidence 344555543322222 23344445 5687 899999877 11 11112222233332221 12246677777
Q ss_pred HHHhCCCCcEEEEEecc-CCcc
Q 031524 137 WLKANGSKKASINNLWN-FNRL 157 (158)
Q Consensus 137 ~l~~~~~~~I~viG~S~-GG~l 157 (158)
.+ +.-.++|.|- ||.+
T Consensus 103 ~v-----~ptvlIG~S~~~g~f 119 (279)
T cd05312 103 AV-----KPTVLIGLSGVGGAF 119 (279)
T ss_pred hc-----CCCEEEEeCCCCCCC
Confidence 65 4557999994 6654
No 252
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=38.66 E-value=30 Score=25.01 Aligned_cols=23 Identities=22% Similarity=0.385 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 81 EIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 81 ~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
.+..+|++|+ ++||.|++.|.-.
T Consensus 24 ~~~~VA~~L~--e~g~dv~atDI~~ 46 (129)
T COG1255 24 FFLDVAKRLA--ERGFDVLATDINE 46 (129)
T ss_pred hHHHHHHHHH--HcCCcEEEEeccc
Confidence 3567999999 9999999999863
No 253
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=38.48 E-value=24 Score=24.74 Aligned_cols=30 Identities=13% Similarity=0.070 Sum_probs=22.5
Q ss_pred ccCCCChHHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 74 EWWGVDFEIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 74 g~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
.++|...+...+++.|+ +.|+.|...-...
T Consensus 10 ~~GG~e~~~~~l~~~l~--~~G~~v~v~~~~~ 39 (177)
T PF13439_consen 10 NIGGAERVVLNLARALA--KRGHEVTVVSPGV 39 (177)
T ss_dssp SSSHHHHHHHHHHHHHH--HTT-EEEEEESS-
T ss_pred CCChHHHHHHHHHHHHH--HCCCEEEEEEcCC
Confidence 34555678889999999 9999999986654
No 254
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=37.29 E-value=2.8e+02 Score=24.52 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=28.2
Q ss_pred CCCEEEEEcccCCCCh--HHHHHHHHHhhcCCCcEEEee
Q 031524 65 DAPGIVVVQEWWGVDF--EIKNHAVKISQLNPGFKALIP 101 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~ 101 (158)
+.|.||++=|..|... ..-.+|.+|. +.|+.|+.+
T Consensus 98 ~~P~vImmvGLQGsGKTTt~~KLA~~lk--k~~~kvllV 134 (451)
T COG0541 98 KPPTVILMVGLQGSGKTTTAGKLAKYLK--KKGKKVLLV 134 (451)
T ss_pred CCCeEEEEEeccCCChHhHHHHHHHHHH--HcCCceEEE
Confidence 4689999999888754 4567999999 899987665
No 255
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=37.07 E-value=51 Score=23.53 Aligned_cols=15 Identities=13% Similarity=0.308 Sum_probs=12.0
Q ss_pred HHHHHhhcCCCcEEEee
Q 031524 85 HAVKISQLNPGFKALIP 101 (158)
Q Consensus 85 ~A~~La~l~~Gy~V~~~ 101 (158)
.-..|. +.||.|+.+
T Consensus 99 ~~~~L~--~~Gw~Vlr~ 113 (117)
T TIGR00632 99 VNSRLQ--ELGWRVLRV 113 (117)
T ss_pred HHHHHH--HCcCEEEEE
Confidence 456788 899999975
No 256
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=36.97 E-value=58 Score=20.93 Aligned_cols=34 Identities=15% Similarity=0.159 Sum_probs=19.3
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEee
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIP 101 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~ 101 (158)
..|.++++||- ...-...+|...|. ++|+.++.+
T Consensus 30 ~~~~~~lvhGg--a~~GaD~iA~~wA~-~~gv~~~~~ 63 (71)
T PF10686_consen 30 RHPDMVLVHGG--APKGADRIAARWAR-ERGVPVIRF 63 (71)
T ss_pred hCCCEEEEECC--CCCCHHHHHHHHHH-HCCCeeEEe
Confidence 35777888873 32333345555542 667776664
No 257
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=36.78 E-value=71 Score=23.83 Aligned_cols=37 Identities=11% Similarity=0.038 Sum_probs=27.4
Q ss_pred CCEEEEEcccCCCChHH--HHHHHHHhhcCCCcEEEeeecC
Q 031524 66 APGIVVVQEWWGVDFEI--KNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~--~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
.|.||.+-|..|..... ..+.++|. +.|+.|+.+|-.
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~--~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLF--ARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHH--HTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH--HcCCcEEEecCc
Confidence 37899999998887543 45777887 889999999853
No 258
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=36.62 E-value=62 Score=25.76 Aligned_cols=37 Identities=14% Similarity=0.066 Sum_probs=30.5
Q ss_pred CCCEEEEEcccCCC--ChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 65 DAPGIVVVQEWWGV--DFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 65 ~~p~VIllHg~~G~--~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
+.|+||++.|+-+. ...+..+...|- -+||.|.++.-
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lD--PRg~~v~~~~~ 67 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLN--PRGARVVALPK 67 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcC--CCeeEEEeCCC
Confidence 46899999998655 467888999998 79999999754
No 259
>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=35.70 E-value=1.3e+02 Score=22.82 Aligned_cols=9 Identities=0% Similarity=-0.430 Sum_probs=5.8
Q ss_pred EEEeccCCc
Q 031524 148 INNLWNFNR 156 (158)
Q Consensus 148 viG~S~GG~ 156 (158)
|+=||+||.
T Consensus 136 V~vHC~GGl 144 (168)
T PF05706_consen 136 VLVHCRGGL 144 (168)
T ss_dssp EEEE-SSSS
T ss_pred EEEECCCCC
Confidence 446999984
No 260
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=35.66 E-value=32 Score=25.24 Aligned_cols=29 Identities=14% Similarity=0.196 Sum_probs=21.8
Q ss_pred ccCCCChHHHHHHHHHhhcCCCcEEEeeecC
Q 031524 74 EWWGVDFEIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 74 g~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
|+.|....-..+|+.|. ++||.|..+|..
T Consensus 5 g~IGlG~mG~~~a~~L~--~~g~~v~~~d~~ 33 (163)
T PF03446_consen 5 GFIGLGNMGSAMARNLA--KAGYEVTVYDRS 33 (163)
T ss_dssp EEE--SHHHHHHHHHHH--HTTTEEEEEESS
T ss_pred EEEchHHHHHHHHHHHH--hcCCeEEeeccc
Confidence 34566666678999999 999999999854
No 261
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=35.51 E-value=57 Score=26.21 Aligned_cols=33 Identities=12% Similarity=0.125 Sum_probs=26.0
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
++..+.++|.......+++.|+ ++|+.|.++..
T Consensus 5 ~~~~p~~gG~~~~~~~la~~L~--~~G~~v~v~~~ 37 (371)
T cd04962 5 IVCYPTYGGSGVVATELGKALA--RRGHEVHFITS 37 (371)
T ss_pred EEEEeCCCCccchHHHHHHHHH--hcCCceEEEec
Confidence 3344567788888899999999 99999888754
No 262
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=35.34 E-value=2.3e+02 Score=22.51 Aligned_cols=38 Identities=11% Similarity=-0.144 Sum_probs=26.7
Q ss_pred CCCEEEEEcccCCC---ChHHHHHHHHHhhcCCCcEEEeeecC
Q 031524 65 DAPGIVVVQEWWGV---DFEIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 65 ~~p~VIllHg~~G~---~~~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
+.|.|++++-.... ..+...+-+.|. +.|+.|..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~--~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALA--PLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHH--HCCCEEEEeccc
Confidence 35788898865432 235666777888 889998887765
No 263
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=35.30 E-value=1.2e+02 Score=26.77 Aligned_cols=31 Identities=19% Similarity=0.352 Sum_probs=24.3
Q ss_pred CCCChHHHHHHHHHhhcCCCcEEEeeecCCCCC
Q 031524 76 WGVDFEIKNHAVKISQLNPGFKALIPDLYRGKV 108 (158)
Q Consensus 76 ~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~ 108 (158)
-+........+..|. ++|..++++|.-.|.+
T Consensus 220 v~~~~~~~~ra~~Lv--~aGVd~i~~D~a~g~~ 250 (475)
T TIGR01303 220 VGINGDVGGKAKALL--DAGVDVLVIDTAHGHQ 250 (475)
T ss_pred eeeCccHHHHHHHHH--HhCCCEEEEeCCCCCc
Confidence 344566778899999 9999999999876544
No 264
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=34.93 E-value=54 Score=21.77 Aligned_cols=31 Identities=16% Similarity=0.286 Sum_probs=22.1
Q ss_pred hhhHHHHHHHHHHHHHhC----CCCcEEEEEeccC
Q 031524 124 WPGAVKDIHASVNWLKAN----GSKKASINNLWNF 154 (158)
Q Consensus 124 ~~~~~~di~~av~~l~~~----~~~~I~viG~S~G 154 (158)
+....+.+...++|++++ +++++-|+|-|-|
T Consensus 16 P~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStG 50 (78)
T PF12242_consen 16 PVGCARNVENQIEYVKSQGKINGPKKVLVIGASTG 50 (78)
T ss_dssp HHHHHHHHHHHHHHHHHC---TS-SEEEEES-SSH
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCc
Confidence 334556778889999886 2688999999876
No 265
>COG3233 Predicted deacetylase [General function prediction only]
Probab=34.74 E-value=2.4e+02 Score=22.61 Aligned_cols=40 Identities=15% Similarity=0.168 Sum_probs=24.6
Q ss_pred CEEEEEcccCCCChH----HHHHHHHHhhcCCCcEE--EeeecCCCCC
Q 031524 67 PGIVVVQEWWGVDFE----IKNHAVKISQLNPGFKA--LIPDLYRGKV 108 (158)
Q Consensus 67 p~VIllHg~~G~~~~----~~~~A~~La~l~~Gy~V--~~~D~~gG~~ 108 (158)
+-+|++|+.....+. +..+.+.+. .++-.+ ++||+.++..
T Consensus 4 ~~iillhdVSpv~~~~~~~i~~~ide~~--~~~~t~lLViPn~~~~~~ 49 (233)
T COG3233 4 PLIILLHDVSPVYWPTLSNIDAAIDEYG--AQNSTVLLVIPNHANDYP 49 (233)
T ss_pred cceEEEEecCcccchhHHHHHHHHHHhC--CCCceEEEEeeccCCCCC
Confidence 478899988776543 334555555 556565 6677665443
No 266
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=34.49 E-value=78 Score=20.73 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=23.1
Q ss_pred CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCC
Q 031524 64 EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGK 107 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~ 107 (158)
...+.||+++. |.. ....+..|. +.||. +.++.||.
T Consensus 60 ~~~~ivv~C~~--G~r--s~~aa~~L~--~~G~~--~~~l~GG~ 95 (100)
T cd01523 60 DDQEVTVICAK--EGS--SQFVAELLA--ERGYD--VDYLAGGM 95 (100)
T ss_pred CCCeEEEEcCC--CCc--HHHHHHHHH--HcCce--eEEeCCcH
Confidence 34577777763 333 245788898 89999 44555553
No 267
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=34.43 E-value=1.8e+02 Score=21.09 Aligned_cols=54 Identities=17% Similarity=0.297 Sum_probs=41.8
Q ss_pred ccCCCCceeEEEee-CCc-eEEEEEEcCCCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 38 DSAASPFKKIQIQR-DDT-TFDAYVVGKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 38 ~~~~~~~~~i~i~~-~~~-~l~~~~~~p~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
+.+-.+.|.|.+-. ..| .+.+|....++...+|.+.| .|.+++ +.|=.|+...|
T Consensus 35 aagi~p~E~V~V~Nv~NG~Rf~TYvI~G~~GSg~I~lNG----------AAArl~--~~GD~VII~sy 90 (126)
T TIGR00223 35 AAGILENEKVDIVNVNNGKRFSTYAIAGKRGSRIICVNG----------AAARCV--SVGDIVIIASY 90 (126)
T ss_pred hcCCCCCCEEEEEECCCCcEEEEEEEEcCCCCCEEEeCC----------HHHhcC--CCCCEEEEEEC
Confidence 33556678888755 444 99999988666778898886 577888 89999999886
No 268
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=34.41 E-value=1.9e+02 Score=22.22 Aligned_cols=76 Identities=9% Similarity=-0.066 Sum_probs=39.7
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCCcEEE
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSKKASI 148 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~I~v 148 (158)
++++-|.. ..--..++++|+ ++|+.|+..+......... .. .....|... .+++..+++.+.+. .+++-+
T Consensus 11 ~vlItG~s--~gIG~~la~~l~--~~G~~v~~~~~~~~~~~~~--~~--~~~~~D~~~-~~~~~~~~~~~~~~-~g~id~ 80 (266)
T PRK06171 11 IIIVTGGS--SGIGLAIVKELL--ANGANVVNADIHGGDGQHE--NY--QFVPTDVSS-AEEVNHTVAEIIEK-FGRIDG 80 (266)
T ss_pred EEEEeCCC--ChHHHHHHHHHH--HCCCEEEEEeCCccccccC--ce--EEEEccCCC-HHHHHHHHHHHHHH-cCCCCE
Confidence 45555532 223345888999 9999999987643211100 00 001112221 24556666666543 345666
Q ss_pred EEeccC
Q 031524 149 NNLWNF 154 (158)
Q Consensus 149 iG~S~G 154 (158)
+=|+.|
T Consensus 81 li~~Ag 86 (266)
T PRK06171 81 LVNNAG 86 (266)
T ss_pred EEECCc
Confidence 667765
No 269
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=34.25 E-value=42 Score=22.67 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=24.4
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCC-CcEEEeeec
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNP-GFKALIPDL 103 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~-Gy~V~~~D~ 103 (158)
||++.|..|.... .+|+.|+ +. |+.++-.|-
T Consensus 1 vI~I~G~~gsGKS--T~a~~La--~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELA--ERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHH--HHHTCEEEEEHH
T ss_pred CEEEECCCCCCHH--HHHHHHH--HHHCCeEEEecc
Confidence 6788888887765 4788888 55 999988887
No 270
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=34.14 E-value=1.7e+02 Score=20.73 Aligned_cols=54 Identities=20% Similarity=0.541 Sum_probs=41.8
Q ss_pred ccCCCCceeEEEee-CCc-eEEEEEEcCCCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 38 DSAASPFKKIQIQR-DDT-TFDAYVVGKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 38 ~~~~~~~~~i~i~~-~~~-~l~~~~~~p~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
+.+-.+.|.|.+-. ..| .+.+|....++...+|.+.| .|.+++ +.|=.|+...|
T Consensus 34 aagi~~~E~V~I~Nv~NG~Rf~TYvI~g~~gSg~I~lNG----------AAAr~~--~~GD~vII~sy 89 (111)
T cd06919 34 AAGILPYEKVLVVNVNNGARFETYVIPGERGSGVICLNG----------AAARLG--QPGDRVIIMAY 89 (111)
T ss_pred hcCCCCCCEEEEEECCCCcEEEEEEEEcCCCCCEEEeCC----------HHHhcC--CCCCEEEEEEC
Confidence 33556678888755 444 99999988666778898886 577888 89999999876
No 271
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=33.94 E-value=65 Score=27.53 Aligned_cols=36 Identities=19% Similarity=0.180 Sum_probs=25.3
Q ss_pred CCEEEEEccc-CCCCh--HHHHHHHHHhhcCCCcEEEeeec
Q 031524 66 APGIVVVQEW-WGVDF--EIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 66 ~p~VIllHg~-~G~~~--~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
.+.||.+-.. +|... ....+|..|+ ..||.|+++|+
T Consensus 105 ~~~vIav~n~KGGVGKTTta~nLA~~LA--~~G~rVLlIDl 143 (387)
T PHA02519 105 NPVVLAVMSHKGGVYKTSSAVHTAQWLA--LQGHRVLLIEG 143 (387)
T ss_pred CceEEEEecCCCCCcHHHHHHHHHHHHH--hCCCcEEEEeC
Confidence 3556555433 34443 4567899999 89999999996
No 272
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=32.64 E-value=1.1e+02 Score=20.59 Aligned_cols=33 Identities=15% Similarity=0.073 Sum_probs=21.1
Q ss_pred CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEe
Q 031524 64 EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALI 100 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~ 100 (158)
...+.||++.+ |........+..|. +.||.|..
T Consensus 63 ~~~~vvvyc~~--g~~~~s~~~a~~l~--~~G~~v~~ 95 (110)
T cd01521 63 KEKLFVVYCDG--PGCNGATKAALKLA--ELGFPVKE 95 (110)
T ss_pred CCCeEEEEECC--CCCchHHHHHHHHH--HcCCeEEE
Confidence 34577777764 22223456778888 88998653
No 273
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=32.47 E-value=21 Score=29.61 Aligned_cols=26 Identities=12% Similarity=0.221 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeccCCcc
Q 031524 129 KDIHASVNWLKANGSKKASINNLWNFNRL 157 (158)
Q Consensus 129 ~di~~av~~l~~~~~~~I~viG~S~GG~l 157 (158)
+++...++|++++ .+-++|.|||..+
T Consensus 122 ~El~~i~~w~~~~---~~s~LgICwGaQa 147 (302)
T PRK05368 122 DELKEILDWAKTH---VTSTLFICWAAQA 147 (302)
T ss_pred HHHHHHHHHHHHc---CCCEEEEcHHHHH
Confidence 4477889999875 5789999999764
No 274
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=32.47 E-value=25 Score=29.61 Aligned_cols=46 Identities=11% Similarity=0.200 Sum_probs=29.1
Q ss_pred EEEEEcC-CCCCEEEEEcccCCCChHH--HHHHHHHhhcCCCcEEEeeecC
Q 031524 57 DAYVVGK-EDAPGIVVVQEWWGVDFEI--KNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 57 ~~~~~~p-~~~p~VIllHg~~G~~~~~--~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
.+|+..| .++|.|+-+|||.|....+ .-+|+.+- ..|-..=.+.+|
T Consensus 99 k~~~~n~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~--~~Gl~S~~V~~f 147 (344)
T KOG2170|consen 99 KSHWANPNPRKPLVLSFHGWTGTGKNYVAEIIAENLY--RGGLRSPFVHHF 147 (344)
T ss_pred HHHhcCCCCCCCeEEEecCCCCCchhHHHHHHHHHHH--hccccchhHHHh
Confidence 3444444 3479999999999986543 34566666 566555444444
No 275
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=32.42 E-value=3.4e+02 Score=23.70 Aligned_cols=37 Identities=14% Similarity=0.118 Sum_probs=29.5
Q ss_pred CCCEEEEEcccCCCCh--HHHHHHHHHhhcCCCcEEEeeec
Q 031524 65 DAPGIVVVQEWWGVDF--EIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
..|.||++-|..|... ....+|.+|. +.|+.|..++.
T Consensus 98 ~~~~vi~lvG~~GvGKTTtaaKLA~~l~--~~G~kV~lV~~ 136 (429)
T TIGR01425 98 GKQNVIMFVGLQGSGKTTTCTKLAYYYQ--RKGFKPCLVCA 136 (429)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHH--HCCCCEEEEcC
Confidence 3589999999988864 4567888998 88998887664
No 276
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=31.96 E-value=98 Score=23.72 Aligned_cols=35 Identities=29% Similarity=0.089 Sum_probs=25.1
Q ss_pred EEEEEcccCCCCh--HHHHHHHHHhhcCCCcEEEeeecC
Q 031524 68 GIVVVQEWWGVDF--EIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 68 ~VIllHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
.|.+...-+|... ....+|..|+ +.|+.|+.+|+-
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la--~~g~~VlliD~D 39 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALK--LLGEPVLAIDLD 39 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHH--hCCCcEEEEeCC
Confidence 3445554445543 3457899999 999999999985
No 277
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=31.60 E-value=2.7e+02 Score=22.21 Aligned_cols=39 Identities=15% Similarity=0.017 Sum_probs=26.8
Q ss_pred CCCEEEEEcccCCCC-hHHHHHHHHHhhcCCCc-EEEeeecCC
Q 031524 65 DAPGIVVVQEWWGVD-FEIKNHAVKISQLNPGF-KALIPDLYR 105 (158)
Q Consensus 65 ~~p~VIllHg~~G~~-~~~~~~A~~La~l~~Gy-~V~~~D~~g 105 (158)
+.|.|++++-..+.. .+...+.+.|. +.|+ .|-..+++.
T Consensus 27 ~~~rI~~iptAS~~~~~~~~~~~~~~~--~lG~~~v~~l~i~~ 67 (250)
T TIGR02069 27 EDAIIVIITSASEEPREVGERYITIFS--RLGVKEVKILDVRE 67 (250)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHH--HcCCceeEEEecCC
Confidence 457899998655543 34566777888 8898 466677754
No 278
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=31.54 E-value=2.2e+02 Score=21.17 Aligned_cols=41 Identities=7% Similarity=-0.021 Sum_probs=30.7
Q ss_pred CCCEEEEEcccCCC---ChHHHHHHHHHhhcCCCcEEEeeecCC-CC
Q 031524 65 DAPGIVVVQEWWGV---DFEIKNHAVKISQLNPGFKALIPDLYR-GK 107 (158)
Q Consensus 65 ~~p~VIllHg~~G~---~~~~~~~A~~La~l~~Gy~V~~~D~~g-G~ 107 (158)
..+.++++||.... ..+...+++.|. +.|..+...-+.+ |.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~--~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALR--KAGKPVELLIFPGEGH 187 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHH--HTTSSEEEEEETT-SS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHH--hcCCCEEEEEcCcCCC
Confidence 35889999986433 256678899998 8999888877776 44
No 279
>PRK07053 glutamine amidotransferase; Provisional
Probab=31.18 E-value=89 Score=24.63 Aligned_cols=34 Identities=6% Similarity=0.145 Sum_probs=20.9
Q ss_pred CEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 67 p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
+.+|+-|.-. +..-.+++.|. +.|+.+-..+.+.
T Consensus 4 ~ilviqh~~~---e~~g~i~~~L~--~~g~~~~v~~~~~ 37 (234)
T PRK07053 4 TAVAIRHVAF---EDLGSFEQVLG--ARGYRVRYVDVGV 37 (234)
T ss_pred eEEEEECCCC---CCChHHHHHHH--HCCCeEEEEecCC
Confidence 3556667422 22234788888 8898877776543
No 280
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=31.17 E-value=73 Score=27.30 Aligned_cols=35 Identities=20% Similarity=0.173 Sum_probs=24.8
Q ss_pred EEEEEc-ccCCCCh--HHHHHHHHHhhcCCCcEEEeeecC
Q 031524 68 GIVVVQ-EWWGVDF--EIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 68 ~VIllH-g~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
.||.+. .=+|... ....+|..|+ ..|+.|+++|+-
T Consensus 122 ~vIav~n~KGGvGKTTta~nLA~~LA--~~G~rVLlIDlD 159 (405)
T PRK13869 122 QVIAVTNFKGGSGKTTTSAHLAQYLA--LQGYRVLAVDLD 159 (405)
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHH--hcCCceEEEcCC
Confidence 455544 3344443 4567899999 899999999985
No 281
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=30.82 E-value=16 Score=14.77 Aligned_cols=7 Identities=0% Similarity=-0.458 Sum_probs=4.7
Q ss_pred EeccCCc
Q 031524 150 NLWNFNR 156 (158)
Q Consensus 150 G~S~GG~ 156 (158)
||++||.
T Consensus 1 gf~l~Gg 7 (10)
T PF08250_consen 1 GFSLGGG 7 (10)
T ss_pred CcccccC
Confidence 6777763
No 282
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=30.74 E-value=2e+02 Score=24.50 Aligned_cols=32 Identities=16% Similarity=0.064 Sum_probs=22.9
Q ss_pred CCCChHHHHHHHHHhhcCC--CcEEEeeecCCCCCC
Q 031524 76 WGVDFEIKNHAVKISQLNP--GFKALIPDLYRGKVG 109 (158)
Q Consensus 76 ~G~~~~~~~~A~~La~l~~--Gy~V~~~D~~gG~~~ 109 (158)
-|..+...+.++.|. +. |.+++++|.-.|.+.
T Consensus 102 vG~~~~d~er~~~L~--~a~~~~d~iviD~AhGhs~ 135 (343)
T TIGR01305 102 SGSSDNDLEKMTSIL--EAVPQLKFICLDVANGYSE 135 (343)
T ss_pred eccCHHHHHHHHHHH--hcCCCCCEEEEECCCCcHH
Confidence 456666666777777 55 599999998777653
No 283
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=30.73 E-value=1e+02 Score=24.50 Aligned_cols=34 Identities=18% Similarity=0.140 Sum_probs=25.3
Q ss_pred EEEEcccCCCCh--HHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 69 IVVVQEWWGVDF--EIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 69 VIllHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
+.+. |=+|... ....+|..|+ +.|+.|+.+|+--
T Consensus 4 i~~~-gKGGVGKTT~a~nLA~~La--~~G~rVLliD~Dp 39 (279)
T PRK13230 4 FCFY-GKGGIGKSTTVCNIAAALA--ESGKKVLVVGCDP 39 (279)
T ss_pred EEEE-CCCCCcHHHHHHHHHHHHH--hCCCEEEEEeeCC
Confidence 4444 6566654 3457899999 9999999999863
No 284
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=30.48 E-value=95 Score=19.28 Aligned_cols=31 Identities=29% Similarity=0.306 Sum_probs=21.6
Q ss_pred EEEcccCCCC--hHHHHHHHHHhhcCCCcEEEeee
Q 031524 70 VVVQEWWGVD--FEIKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 70 IllHg~~G~~--~~~~~~A~~La~l~~Gy~V~~~D 102 (158)
+++-|..|.. .....++..|+ +.|+.|+.+|
T Consensus 2 ~~~~g~~G~Gktt~~~~l~~~l~--~~g~~v~~~~ 34 (99)
T cd01983 2 IVVTGKGGVGKTTLAANLAAALA--KRGKRVLLID 34 (99)
T ss_pred EEEECCCCCCHHHHHHHHHHHHH--HCCCeEEEEC
Confidence 3344444554 34567899999 8999998887
No 285
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products.
Probab=30.41 E-value=2.8e+02 Score=22.05 Aligned_cols=35 Identities=14% Similarity=0.118 Sum_probs=24.3
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
+.|.++++ |.....+.+++... ..||.|.++|-+.
T Consensus 99 p~~~L~If----GaG~va~~la~la~--~lGf~V~v~D~R~ 133 (246)
T TIGR02964 99 PAPHVVLF----GAGHVGRALVRALA--PLPCRVTWVDSRE 133 (246)
T ss_pred CCCEEEEE----CCcHHHHHHHHHHh--cCCCEEEEEeCCc
Confidence 34555554 34555566777777 7899999999874
No 286
>PLN02209 serine carboxypeptidase
Probab=30.23 E-value=3.7e+02 Score=23.40 Aligned_cols=30 Identities=23% Similarity=0.243 Sum_probs=20.1
Q ss_pred HHHHHHHH-HHHHhCC---CCcEEEEEeccCCcc
Q 031524 128 VKDIHASV-NWLKANG---SKKASINNLWNFNRL 157 (158)
Q Consensus 128 ~~di~~av-~~l~~~~---~~~I~viG~S~GG~l 157 (158)
++|+..++ .|+...+ ..++.|.|-|.||..
T Consensus 147 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~y 180 (437)
T PLN02209 147 VKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMI 180 (437)
T ss_pred HHHHHHHHHHHHHhCccccCCCEEEEecCcCcee
Confidence 35555544 3444444 468999999999975
No 287
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=29.92 E-value=39 Score=27.09 Aligned_cols=24 Identities=13% Similarity=-0.125 Sum_probs=17.0
Q ss_pred HHHHHHHhCCCCcEEEEEeccCCc
Q 031524 133 ASVNWLKANGSKKASINNLWNFNR 156 (158)
Q Consensus 133 ~av~~l~~~~~~~I~viG~S~GG~ 156 (158)
+..+.+++.+.++..++|||+|=.
T Consensus 65 al~~~l~~~g~~P~~v~GhS~GE~ 88 (295)
T TIGR03131 65 AAWRALLALLPRPSAVAGYSVGEY 88 (295)
T ss_pred HHHHHHHhcCCCCcEEeecCHHHH
Confidence 344556666667889999999843
No 288
>PRK12467 peptide synthase; Provisional
Probab=29.73 E-value=1.5e+02 Score=33.10 Aligned_cols=80 Identities=13% Similarity=-0.017 Sum_probs=46.2
Q ss_pred CCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCCc
Q 031524 66 APGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSKK 145 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~ 145 (158)
.+.++..|+..+....+..++..|. .+..++.+...+-...+. ....++.....-...+.+. ++..+
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~---~~~~~~~l~~~~~~~d~~--------~~~~~~~~~~~y~~~~~~~--~~~~p 3758 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILE---GDRHVLGLTCRHLLDDGW--------QDTSLQAMAVQYADYILWQ--QAKGP 3758 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhC---CCCcEEEEeccccccccC--------CccchHHHHHHHHHHHHHh--ccCCC
Confidence 4679999998877666666777774 467777776655111110 0012222222222233333 24567
Q ss_pred EEEEEeccCCccC
Q 031524 146 ASINNLWNFNRLA 158 (158)
Q Consensus 146 I~viG~S~GG~lA 158 (158)
..+.|||+||.+|
T Consensus 3759 ~~l~g~s~g~~~a 3771 (3956)
T PRK12467 3759 YGLLGWSLGGTLA 3771 (3956)
T ss_pred eeeeeeecchHHH
Confidence 8899999999753
No 289
>PHA02518 ParA-like protein; Provisional
Probab=29.54 E-value=93 Score=23.11 Aligned_cols=33 Identities=27% Similarity=0.236 Sum_probs=23.2
Q ss_pred EEEcccCCCCh--HHHHHHHHHhhcCCCcEEEeeecC
Q 031524 70 VVVQEWWGVDF--EIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 70 IllHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
.+...=+|... ....+|..|+ +.|+.|+++|+-
T Consensus 4 ~v~~~KGGvGKTT~a~~la~~la--~~g~~vlliD~D 38 (211)
T PHA02518 4 AVLNQKGGAGKTTVATNLASWLH--ADGHKVLLVDLD 38 (211)
T ss_pred EEEcCCCCCCHHHHHHHHHHHHH--hCCCeEEEEeCC
Confidence 33443344443 3457889999 999999999985
No 290
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=29.42 E-value=34 Score=28.45 Aligned_cols=27 Identities=15% Similarity=0.128 Sum_probs=18.2
Q ss_pred HHHHHHHHhCCCCcEEEEEeccCCccC
Q 031524 132 HASVNWLKANGSKKASINNLWNFNRLA 158 (158)
Q Consensus 132 ~~av~~l~~~~~~~I~viG~S~GG~lA 158 (158)
...+.|-.+.+.++.+|+|-||||.+|
T Consensus 183 ~~lf~Ws~~~g~g~~~~~g~Smgg~~a 209 (371)
T KOG1551|consen 183 VKLFTWSSADGLGNLNLVGRSMGGDIA 209 (371)
T ss_pred HHhcccccccCcccceeeeeecccHHH
Confidence 333444222247899999999999764
No 291
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=29.40 E-value=1.1e+02 Score=26.13 Aligned_cols=74 Identities=18% Similarity=0.169 Sum_probs=39.4
Q ss_pred CEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHH-------cCC-ChhhHHHHHHHHHHHH
Q 031524 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLM-------SGL-DWPGAVKDIHASVNWL 138 (158)
Q Consensus 67 p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~-------~~~-~~~~~~~di~~av~~l 138 (158)
..|+++- +|... .+-+.|+ ++|+.|.++-+-- +.++..++. +.. |+ +.+..+++.+
T Consensus 180 ~~Vv~iD--~GvK~---nIlr~L~--~rg~~vtVVP~~t-----~~eeIl~~~pDGiflSNGPGDP----~~~~~~i~~i 243 (368)
T COG0505 180 KHVVVID--FGVKR---NILRELV--KRGCRVTVVPADT-----SAEEILALNPDGIFLSNGPGDP----APLDYAIETI 243 (368)
T ss_pred cEEEEEE--cCccH---HHHHHHH--HCCCeEEEEcCCC-----CHHHHHhhCCCEEEEeCCCCCh----hHHHHHHHHH
Confidence 3555554 35543 4677888 9999999986531 222221111 111 33 2333444444
Q ss_pred HhCCCCcEEEEEeccCCc
Q 031524 139 KANGSKKASINNLWNFNR 156 (158)
Q Consensus 139 ~~~~~~~I~viG~S~GG~ 156 (158)
++.-..+|=++|.|+|-.
T Consensus 244 k~l~~~~iPifGICLGHQ 261 (368)
T COG0505 244 KELLGTKIPIFGICLGHQ 261 (368)
T ss_pred HHHhccCCCeEEEcHHHH
Confidence 433124557899999854
No 292
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=29.38 E-value=57 Score=24.23 Aligned_cols=37 Identities=11% Similarity=0.077 Sum_probs=24.9
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
+.+.|+++-|-..+...-.-.|++|+ ++||.|.++-+
T Consensus 24 ~~~~v~il~G~GnNGgDgl~~AR~L~--~~G~~V~v~~~ 60 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGLVAARHLA--NRGYNVTVYLV 60 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHHHHHHHHH--HTTCEEEEEEE
T ss_pred CCCeEEEEECCCCChHHHHHHHHHHH--HCCCeEEEEEE
Confidence 45677777765443445567899999 89999998433
No 293
>PRK12744 short chain dehydrogenase; Provisional
Probab=28.92 E-value=2.7e+02 Score=21.32 Aligned_cols=33 Identities=15% Similarity=-0.018 Sum_probs=21.9
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
.+++-|.. ..--..+|+.|+ ++|+.|++++.+.
T Consensus 10 ~vlItGa~--~gIG~~~a~~l~--~~G~~vv~i~~~~ 42 (257)
T PRK12744 10 VVLIAGGA--KNLGGLIARDLA--AQGAKAVAIHYNS 42 (257)
T ss_pred EEEEECCC--chHHHHHHHHHH--HCCCcEEEEecCC
Confidence 45555532 233346899999 9999988887653
No 294
>PF08255 Leader_Trp: Trp-operon Leader Peptide; InterPro: IPR013205 The tryptophan operon regulatory region of Citrobacter freundii (leader transcript) encodes a 14-residue peptide containing characteristic tandem tryptophan residues. It is about 10 nucleotides shorter than those of Escherichia coli and Salmonella typhimurium [].
Probab=28.89 E-value=34 Score=15.22 Aligned_cols=11 Identities=18% Similarity=0.848 Sum_probs=7.8
Q ss_pred CEEEEEcccCC
Q 031524 67 PGIVVVQEWWG 77 (158)
Q Consensus 67 p~VIllHg~~G 77 (158)
.+++.+|||+-
T Consensus 2 ~a~~~L~~WWr 12 (14)
T PF08255_consen 2 KATFSLHGWWR 12 (14)
T ss_pred ceEEEEeeEEE
Confidence 36788888863
No 295
>PRK06756 flavodoxin; Provisional
Probab=28.38 E-value=1.4e+02 Score=21.15 Aligned_cols=35 Identities=14% Similarity=0.088 Sum_probs=24.4
Q ss_pred EEEEEcccCCCChHH-HHHHHHHhhcCCCcEEEeeecC
Q 031524 68 GIVVVQEWWGVDFEI-KNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 68 ~VIllHg~~G~~~~~-~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
++|+++..+|+.+.+ ..+++.|. +.|..|.+.|..
T Consensus 4 v~IiY~S~tGnTe~vA~~ia~~l~--~~g~~v~~~~~~ 39 (148)
T PRK06756 4 LVMIFASMSGNTEEMADHIAGVIR--ETENEIEVIDIM 39 (148)
T ss_pred EEEEEECCCchHHHHHHHHHHHHh--hcCCeEEEeehh
Confidence 456666667776654 45677787 789998887764
No 296
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=28.22 E-value=46 Score=26.49 Aligned_cols=24 Identities=8% Similarity=-0.075 Sum_probs=17.3
Q ss_pred HHHHHHHhCCCCcEEEEEeccCCc
Q 031524 133 ASVNWLKANGSKKASINNLWNFNR 156 (158)
Q Consensus 133 ~av~~l~~~~~~~I~viG~S~GG~ 156 (158)
+..+.+++.+-++-.++|||+|-.
T Consensus 71 a~~~~l~~~Gi~p~~~~GhSlGE~ 94 (298)
T smart00827 71 ALARLWRSWGVRPDAVVGHSLGEI 94 (298)
T ss_pred HHHHHHHHcCCcccEEEecCHHHH
Confidence 445666666666789999999853
No 297
>TIGR01378 thi_PPkinase thiamine pyrophosphokinase. This model has been revised. Originally, it described strictly eukaryotic thiamine pyrophosphokinase. However, it is now expanded to include also homologous enzymes, apparently functionally equivalent, from species that rely on thiamine pyrophosphokinase rather than thiamine-monophosphate kinase (TIGR01379) to produce the active TPP cofactor. This includes the thiamine pyrophosphokinase from Bacillus subtilis, previously designated YloS.
Probab=28.00 E-value=70 Score=24.61 Aligned_cols=29 Identities=14% Similarity=0.255 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeccCCc
Q 031524 127 AVKDIHASVNWLKANGSKKASINNLWNFNR 156 (158)
Q Consensus 127 ~~~di~~av~~l~~~~~~~I~viG~S~GG~ 156 (158)
-.-|.+.|++++.+++.+.|.++|. +||+
T Consensus 71 D~TD~e~Al~~~~~~~~~~i~i~Ga-~GgR 99 (203)
T TIGR01378 71 DTTDLELALKYALERGADEITILGA-TGGR 99 (203)
T ss_pred CCCHHHHHHHHHHHCCCCEEEEEcC-CCCc
Confidence 3467888999988776778999986 6665
No 298
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=27.73 E-value=91 Score=23.65 Aligned_cols=19 Identities=11% Similarity=0.092 Sum_probs=16.5
Q ss_pred hHHHHHHHHHhhcCCCcEEEe
Q 031524 80 FEIKNHAVKISQLNPGFKALI 100 (158)
Q Consensus 80 ~~~~~~A~~La~l~~Gy~V~~ 100 (158)
.+..++|.+|+ +.||...|
T Consensus 114 NHQ~ELA~qL~--~egyL~~C 132 (170)
T KOG3349|consen 114 NHQLELAKQLA--EEGYLYYC 132 (170)
T ss_pred hHHHHHHHHHH--hcCcEEEe
Confidence 36678999999 99999888
No 299
>PRK09072 short chain dehydrogenase; Provisional
Probab=27.61 E-value=1.1e+02 Score=23.66 Aligned_cols=31 Identities=13% Similarity=-0.034 Sum_probs=21.5
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
.+++.|.. ..--..+++.|+ ++|+.|++.+-
T Consensus 7 ~vlItG~s--~~iG~~ia~~l~--~~G~~V~~~~r 37 (263)
T PRK09072 7 RVLLTGAS--GGIGQALAEALA--AAGARLLLVGR 37 (263)
T ss_pred EEEEECCC--chHHHHHHHHHH--HCCCEEEEEEC
Confidence 45555532 333356889999 99999999873
No 300
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=27.46 E-value=1.2e+02 Score=25.71 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=29.7
Q ss_pred CCCCEEEEEcccCCCC--hHHHHHHHHHhhcCCCcEEEee
Q 031524 64 EDAPGIVVVQEWWGVD--FEIKNHAVKISQLNPGFKALIP 101 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~--~~~~~~A~~La~l~~Gy~V~~~ 101 (158)
.+.|.||++=|..|.. ..+-.+|.+|. ++|+.|+..
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~--~~g~~Vlla 173 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLK--QQGKSVLLA 173 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHH--HCCCeEEEE
Confidence 3469999999998875 45678999999 999999874
No 301
>PRK13236 nitrogenase reductase; Reviewed
Probab=27.26 E-value=1.1e+02 Score=24.90 Aligned_cols=35 Identities=14% Similarity=0.086 Sum_probs=26.8
Q ss_pred EEEEEcccCCCChH--HHHHHHHHhhcCCCcEEEeeecC
Q 031524 68 GIVVVQEWWGVDFE--IKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 68 ~VIllHg~~G~~~~--~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
.||-+.|=+|+... ...+|..|+ +.|+.|+.+|.-
T Consensus 7 ~~~~~~GKGGVGKTt~a~NLA~~La--~~G~rVLliD~D 43 (296)
T PRK13236 7 RQIAFYGKGGIGKSTTSQNTLAAMA--EMGQRILIVGCD 43 (296)
T ss_pred eEEEEECCCcCCHHHHHHHHHHHHH--HCCCcEEEEEcc
Confidence 45556776666543 457899999 999999999985
No 302
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=27.22 E-value=36 Score=26.78 Aligned_cols=13 Identities=8% Similarity=-0.309 Sum_probs=11.6
Q ss_pred CCcEEEEEeccCC
Q 031524 143 SKKASINNLWNFN 155 (158)
Q Consensus 143 ~~~I~viG~S~GG 155 (158)
...|.|+|||+|.
T Consensus 234 i~~I~i~GhSl~~ 246 (270)
T PF14253_consen 234 IDEIIIYGHSLGE 246 (270)
T ss_pred CCEEEEEeCCCch
Confidence 5899999999985
No 303
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=26.56 E-value=1.1e+02 Score=22.95 Aligned_cols=31 Identities=16% Similarity=0.102 Sum_probs=21.5
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
.+++.|. ...--..+|+.|+ ++|+.|++.+-
T Consensus 4 ~vlItG~--s~~iG~~la~~l~--~~g~~vi~~~r 34 (245)
T PRK12824 4 IALVTGA--KRGIGSAIARELL--NDGYRVIATYF 34 (245)
T ss_pred EEEEeCC--CchHHHHHHHHHH--HcCCEEEEEeC
Confidence 4566653 3333446888998 88999999863
No 304
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=26.32 E-value=2.6e+02 Score=21.93 Aligned_cols=79 Identities=19% Similarity=0.095 Sum_probs=46.4
Q ss_pred EEEEEc-ccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCC--Chh--hHHHHHHHHHHHHHhCC
Q 031524 68 GIVVVQ-EWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGL--DWP--GAVKDIHASVNWLKANG 142 (158)
Q Consensus 68 ~VIllH-g~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~--~~~--~~~~di~~av~~l~~~~ 142 (158)
.|-++. |..|.. +..|++|+ ++|-.|+..|++.... .+.++++-.+. .+. .-.+|+.+++.-.+..
T Consensus 10 lvalvtggasglg---~ataerla--kqgasv~lldlp~skg---~~vakelg~~~vf~padvtsekdv~aala~ak~k- 80 (260)
T KOG1199|consen 10 LVALVTGGASGLG---KATAERLA--KQGASVALLDLPQSKG---ADVAKELGGKVVFTPADVTSEKDVRAALAKAKAK- 80 (260)
T ss_pred eeEEeecCccccc---HHHHHHHH--hcCceEEEEeCCcccc---hHHHHHhCCceEEeccccCcHHHHHHHHHHHHhh-
Confidence 344444 444443 35789999 9999999999985211 12233332211 111 1237788888776654
Q ss_pred CCcEEEEEeccCC
Q 031524 143 SKKASINNLWNFN 155 (158)
Q Consensus 143 ~~~I~viG~S~GG 155 (158)
.+|+.+.=-|.|=
T Consensus 81 fgrld~~vncagi 93 (260)
T KOG1199|consen 81 FGRLDALVNCAGI 93 (260)
T ss_pred ccceeeeeeccce
Confidence 5677776667663
No 305
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=26.31 E-value=2.1e+02 Score=19.38 Aligned_cols=64 Identities=13% Similarity=0.050 Sum_probs=34.0
Q ss_pred hHHHHHHHHHhhcCCCcEEEeeecCCCCCCCCHHHHHHHHcCC---------ChhhHHHHHHHHHHHHHhCCC-CcEEEE
Q 031524 80 FEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLMSGL---------DWPGAVKDIHASVNWLKANGS-KKASIN 149 (158)
Q Consensus 80 ~~~~~~A~~La~l~~Gy~V~~~D~~gG~~~~~~~~~~~~~~~~---------~~~~~~~di~~av~~l~~~~~-~~I~vi 149 (158)
-...-++..|. +.||.|+-. |... .+++..+..... .......++...++.+++... +...++
T Consensus 14 lG~~~~~~~l~--~~G~~V~~l---g~~~--~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~v 86 (119)
T cd02067 14 IGKNIVARALR--DAGFEVIDL---GVDV--PPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLV 86 (119)
T ss_pred HHHHHHHHHHH--HCCCEEEEC---CCCC--CHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEE
Confidence 34556788888 899999553 3221 222222221111 113345667777888877743 333344
Q ss_pred E
Q 031524 150 N 150 (158)
Q Consensus 150 G 150 (158)
|
T Consensus 87 G 87 (119)
T cd02067 87 G 87 (119)
T ss_pred E
Confidence 4
No 306
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=26.20 E-value=1.2e+02 Score=23.89 Aligned_cols=29 Identities=21% Similarity=0.099 Sum_probs=22.7
Q ss_pred ccCCCChH--HHHHHHHHhhcCCCcEEEeeecC
Q 031524 74 EWWGVDFE--IKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 74 g~~G~~~~--~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
|=+|.... ...+|..|+ ++|+.|+++|.-
T Consensus 7 gKGGvGKTT~a~nLA~~la--~~G~rvlliD~D 37 (267)
T cd02032 7 GKGGIGKSTTSSNLSVALA--KRGKKVLQIGCD 37 (267)
T ss_pred cCCCCCHHHHHHHHHHHHH--HCCCcEEEEecC
Confidence 55566543 457899999 999999999985
No 307
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=26.13 E-value=51 Score=25.58 Aligned_cols=18 Identities=17% Similarity=0.228 Sum_probs=15.4
Q ss_pred HHHHHhhcCCCcEEEeeecC
Q 031524 85 HAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 85 ~A~~La~l~~Gy~V~~~D~~ 104 (158)
-+.+|| ++||.|.++|+-
T Consensus 48 da~~LA--~~G~~V~gvD~S 65 (213)
T TIGR03840 48 DLAWLA--EQGHRVLGVELS 65 (213)
T ss_pred HHHHHH--hCCCeEEEEeCC
Confidence 567889 999999999973
No 308
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=25.99 E-value=2.2e+02 Score=23.53 Aligned_cols=38 Identities=13% Similarity=0.095 Sum_probs=23.2
Q ss_pred CEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCC
Q 031524 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRG 106 (158)
Q Consensus 67 p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG 106 (158)
..+++++|-.........+...|. ++|..+..++-..+
T Consensus 23 ~r~liv~d~~~~~~~~~~v~~~l~--~~~~~~~~~~~~~~ 60 (345)
T cd08171 23 KKVVVIGGKTALAAAKDKIKAALE--QSGIEITDFIWYGG 60 (345)
T ss_pred CEEEEEeCHHHHHHHHHHHHHHHH--HCCCeEEEEEecCC
Confidence 456667753222334455677787 78988877765544
No 309
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.
Probab=25.97 E-value=1.6e+02 Score=19.61 Aligned_cols=24 Identities=25% Similarity=0.263 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEec
Q 031524 129 KDIHASVNWLKANGSKKASINNLW 152 (158)
Q Consensus 129 ~di~~av~~l~~~~~~~I~viG~S 152 (158)
..+..+.++|++.+.-.|-|.||+
T Consensus 17 ~~L~~~a~~l~~~~~~~i~I~Ght 40 (104)
T TIGR02802 17 AILDAHAAYLKKNPSVRVTIEGHT 40 (104)
T ss_pred HHHHHHHHHHHHCCCcEEEEEEec
Confidence 456667788887755579999997
No 310
>PRK05844 pyruvate flavodoxin oxidoreductase subunit gamma; Validated
Probab=25.09 E-value=1.4e+02 Score=22.47 Aligned_cols=34 Identities=18% Similarity=0.085 Sum_probs=25.8
Q ss_pred EEEcccCCCCh--HHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 70 VVVQEWWGVDF--EIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 70 IllHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
|.+||..|..- .-.-+++.+. ..||.|....-||
T Consensus 4 i~~~g~gGQGi~ta~~ila~a~~--~~G~~v~~~~~yg 39 (186)
T PRK05844 4 IRWHSRAGQGAVTGAKGLADVIA--KTGKEVQAFAFYG 39 (186)
T ss_pred EEEeccCCCcHHHHHHHHHHHHH--hCCceEEEeeccC
Confidence 56798877653 3345777787 8999999988887
No 311
>PF15142 INCA1: INCA1
Probab=24.97 E-value=26 Score=26.13 Aligned_cols=38 Identities=29% Similarity=0.391 Sum_probs=28.7
Q ss_pred hhhhhhHHhhhcCCCCCCccCCCCCCCccccccc-cccc
Q 031524 2 LAAASRILSRSTPLLKPSLARTHFPAGYRFAVRS-MADS 39 (158)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 39 (158)
++-.||+.|||.|.--|+-..-.-|.+|...+=. ++|.
T Consensus 2 ~~kcSRVVsRs~pp~LPsQ~lrlmpq~Ygd~FWenLsqr 40 (178)
T PF15142_consen 2 FAKCSRVVSRSPPPSLPSQSLRLMPQRYGDIFWENLSQR 40 (178)
T ss_pred cccccceeecCCCCCCCccccCCCcchhhhHHHHhhccC
Confidence 3567999999999888888887888888766544 4443
No 312
>TIGR01287 nifH nitrogenase iron protein. This model describes nitrogenase (EC 1.18.6.1) iron protein, also called nitrogenase reductase or nitrogenase component II. This model includes molybdenum-iron nitrogenase reductase (nifH), vanadium-iron nitrogenase reductase (vnfH), and iron-iron nitrogenase reductase (anfH). The model excludes the homologous protein from the light-independent protochlorophyllide reductase.
Probab=24.84 E-value=1.3e+02 Score=23.70 Aligned_cols=32 Identities=19% Similarity=0.148 Sum_probs=24.1
Q ss_pred EEcccCCCCh--HHHHHHHHHhhcCCCcEEEeeecC
Q 031524 71 VVQEWWGVDF--EIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 71 llHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
.+-|=+|+.. -...+|..|+ +.|+.|+.+|+-
T Consensus 4 a~~gKGGVGKTT~a~nLA~~La--~~G~~VlliD~D 37 (275)
T TIGR01287 4 AIYGKGGIGKSTTTQNIAAALA--EMGKKVMIVGCD 37 (275)
T ss_pred EEeCCCcCcHHHHHHHHHHHHH--HCCCeEEEEeCC
Confidence 3346556654 3457899999 999999999986
No 313
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=24.82 E-value=88 Score=17.94 Aligned_cols=13 Identities=38% Similarity=0.672 Sum_probs=11.7
Q ss_pred CCCcEEEeeecCC
Q 031524 93 NPGFKALIPDLYR 105 (158)
Q Consensus 93 ~~Gy~V~~~D~~g 105 (158)
+.||.+.+||+.|
T Consensus 11 ~~~y~~~~pdlpg 23 (48)
T PF03681_consen 11 DGGYVAYFPDLPG 23 (48)
T ss_dssp SSSEEEEETTCCT
T ss_pred CCeEEEEeCCccC
Confidence 6799999999987
No 314
>PRK10802 peptidoglycan-associated outer membrane lipoprotein; Provisional
Probab=24.81 E-value=1.5e+02 Score=22.31 Aligned_cols=24 Identities=25% Similarity=0.351 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEec
Q 031524 129 KDIHASVNWLKANGSKKASINNLW 152 (158)
Q Consensus 129 ~di~~av~~l~~~~~~~I~viG~S 152 (158)
+.+....++|++.+..+|-|.||+
T Consensus 86 ~~L~~~a~~L~~~p~~~v~I~Ght 109 (173)
T PRK10802 86 QMLDAHANFLRSNPSYKVTVEGHA 109 (173)
T ss_pred HHHHHHHHHHHhCCCceEEEEEec
Confidence 445667788887766689999997
No 315
>PRK00889 adenylylsulfate kinase; Provisional
Probab=24.79 E-value=1.9e+02 Score=20.95 Aligned_cols=35 Identities=17% Similarity=0.140 Sum_probs=26.0
Q ss_pred CCEEEEEcccCCCChH--HHHHHHHHhhcCCCcEEEeee
Q 031524 66 APGIVVVQEWWGVDFE--IKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~--~~~~A~~La~l~~Gy~V~~~D 102 (158)
.+.+|++.|..|.... ...++..|. ..|+.+..+|
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~--~~g~~v~~id 39 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLR--EAGYPVEVLD 39 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH--HcCCeEEEEc
Confidence 3568899999888653 346778887 7788887765
No 316
>PRK08177 short chain dehydrogenase; Provisional
Probab=24.69 E-value=1.3e+02 Score=22.54 Aligned_cols=19 Identities=5% Similarity=0.032 Sum_probs=16.0
Q ss_pred HHHHHHHhhcCCCcEEEeeec
Q 031524 83 KNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 83 ~~~A~~La~l~~Gy~V~~~D~ 103 (158)
..+++.|+ ++|+.|++.+-
T Consensus 15 ~~la~~l~--~~G~~V~~~~r 33 (225)
T PRK08177 15 LGLVDRLL--ERGWQVTATVR 33 (225)
T ss_pred HHHHHHHH--hCCCEEEEEeC
Confidence 45899999 99999999874
No 317
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=24.65 E-value=3.8e+02 Score=21.64 Aligned_cols=36 Identities=6% Similarity=-0.031 Sum_probs=20.5
Q ss_pred CCEEEEEcccCCCC-hHHHHHHHHHhhcCCCc-EEEeeec
Q 031524 66 APGIVVVQEWWGVD-FEIKNHAVKISQLNPGF-KALIPDL 103 (158)
Q Consensus 66 ~p~VIllHg~~G~~-~~~~~~A~~La~l~~Gy-~V~~~D~ 103 (158)
.-.|++.||..-.. ..+.-+-..|. ++|| .|++...
T Consensus 138 e~~vlmgHGt~h~s~~~YacLd~~~~--~~~f~~v~v~~v 175 (265)
T COG4822 138 EILVLMGHGTDHHSNAAYACLDHVLD--EYGFDNVFVAAV 175 (265)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHH--hcCCCceEEEEe
Confidence 34677789854432 33333444556 8899 6666543
No 318
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=24.59 E-value=1.9e+02 Score=23.80 Aligned_cols=56 Identities=16% Similarity=0.047 Sum_probs=31.6
Q ss_pred EEEeeecC-C-CCCCCCHHHHHHHHcCCChhhHHHHHHHHH-HHHHhCC---CCcEEEEEeccCCcc
Q 031524 97 KALIPDLY-R-GKVGLDTAEAQHLMSGLDWPGAVKDIHASV-NWLKANG---SKKASINNLWNFNRL 157 (158)
Q Consensus 97 ~V~~~D~~-g-G~~~~~~~~~~~~~~~~~~~~~~~di~~av-~~l~~~~---~~~I~viG~S~GG~l 157 (158)
+++-+|-+ | |.|-.+... ...+....++|+..++ .|+...+ ..+..|.|-|.||..
T Consensus 3 NvLfiDqPvGvGfSy~~~~~-----~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~Y 64 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPI-----DKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMI 64 (319)
T ss_pred cEEEecCCCCCCCCCCCCCC-----CccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccch
Confidence 57778877 5 555221100 0111122236666554 4455544 578999999999975
No 319
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=24.42 E-value=2.8e+02 Score=20.10 Aligned_cols=53 Identities=21% Similarity=0.416 Sum_probs=41.0
Q ss_pred cCCCCceeEEEee-CCc-eEEEEEEcCCCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 39 SAASPFKKIQIQR-DDT-TFDAYVVGKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 39 ~~~~~~~~i~i~~-~~~-~l~~~~~~p~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
.+-.+.|.|.+-. ..| .+.+|....++...+|.+.| .|.+++ +.|=.|+...|
T Consensus 36 agi~p~E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~lNG----------AAAr~~--~~GD~vII~ay 90 (126)
T PRK05449 36 AGILENEKVQIVNVNNGARFETYVIAGERGSGVICLNG----------AAARLV--QVGDLVIIAAY 90 (126)
T ss_pred cCCCCCCEEEEEECCCCcEEEEEEEEcCCCCCEEEeCC----------HHHhcC--CCCCEEEEEEC
Confidence 3456678888755 444 99999988666778888886 577888 88999999876
No 320
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=24.42 E-value=2.7e+02 Score=23.68 Aligned_cols=31 Identities=16% Similarity=0.124 Sum_probs=22.2
Q ss_pred CCCChHHHHHHHHHhhcC--CCcEEEeeecCCCCC
Q 031524 76 WGVDFEIKNHAVKISQLN--PGFKALIPDLYRGKV 108 (158)
Q Consensus 76 ~G~~~~~~~~A~~La~l~--~Gy~V~~~D~~gG~~ 108 (158)
-|..+...+.++.|. + .|.+++++|.-.|.+
T Consensus 103 vG~~~~d~er~~~L~--~~~~g~D~iviD~AhGhs 135 (346)
T PRK05096 103 TGTSDADFEKTKQIL--ALSPALNFICIDVANGYS 135 (346)
T ss_pred ecCCHHHHHHHHHHH--hcCCCCCEEEEECCCCcH
Confidence 355666566666776 5 599999999877765
No 321
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=24.40 E-value=2.2e+02 Score=18.75 Aligned_cols=23 Identities=9% Similarity=-0.034 Sum_probs=15.7
Q ss_pred EEEEEcccCCC--ChHHHHHHHHHh
Q 031524 68 GIVVVQEWWGV--DFEIKNHAVKIS 90 (158)
Q Consensus 68 ~VIllHg~~G~--~~~~~~~A~~La 90 (158)
.||+-||-... +..+..+++.+.
T Consensus 2 ivlv~hGS~~~~~~~~~~~l~~~l~ 26 (101)
T cd03416 2 LLLVGHGSRDPRAAEALEALAERLR 26 (101)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 46777986542 346777888887
No 322
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase. This model describes a rather tightly conserved cluster of IMP dehydrogenase sequences, many of which are characterized. The model excludes two related families of proteins proposed also to be IMP dehydrogenases, but without characterized members. These are related families are the subject of separate models.
Probab=24.40 E-value=2.9e+02 Score=24.03 Aligned_cols=36 Identities=19% Similarity=0.185 Sum_probs=26.5
Q ss_pred EEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCCCCC
Q 031524 71 VVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKV 108 (158)
Q Consensus 71 llHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~ 108 (158)
++-+.-+.+......+..|. +.|..++.+|.-.|.+
T Consensus 214 ~V~aav~~~~~~~~r~~~L~--~aG~d~I~vd~a~g~~ 249 (450)
T TIGR01302 214 IVGAAVGTREFDKERAEALV--KAGVDVIVIDSSHGHS 249 (450)
T ss_pred EEEEEecCchhHHHHHHHHH--HhCCCEEEEECCCCcH
Confidence 34444556666667788888 8999999999976644
No 323
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=24.37 E-value=1.3e+02 Score=21.82 Aligned_cols=12 Identities=17% Similarity=0.166 Sum_probs=6.1
Q ss_pred CCcEEEeeecCC
Q 031524 94 PGFKALIPDLYR 105 (158)
Q Consensus 94 ~Gy~V~~~D~~g 105 (158)
.+|.++.+|...
T Consensus 66 ~~yD~VIiD~pp 77 (169)
T cd02037 66 GELDYLVIDMPP 77 (169)
T ss_pred CCCCEEEEeCCC
Confidence 355555555543
No 324
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=24.23 E-value=1.3e+02 Score=20.58 Aligned_cols=29 Identities=24% Similarity=0.344 Sum_probs=21.6
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEee
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIP 101 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~ 101 (158)
+|.+|+ ...+.+..+++.|. +.||.+++-
T Consensus 3 ~isv~d--~~K~~~~~~a~~l~--~~G~~i~AT 31 (112)
T cd00532 3 FLSVSD--HVKAMLVDLAPKLS--SDGFPLFAT 31 (112)
T ss_pred EEEEEc--ccHHHHHHHHHHHH--HCCCEEEEC
Confidence 445565 34677888999998 889999884
No 325
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=24.18 E-value=54 Score=25.99 Aligned_cols=18 Identities=17% Similarity=0.148 Sum_probs=15.2
Q ss_pred HHHHHhhcCCCcEEEeeecC
Q 031524 85 HAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 85 ~A~~La~l~~Gy~V~~~D~~ 104 (158)
-+.+|+ ++||.|+.+|+-
T Consensus 57 D~~~LA--~~G~~V~GvDlS 74 (226)
T PRK13256 57 DMLFFL--SKGVKVIGIELS 74 (226)
T ss_pred HHHHHH--hCCCcEEEEecC
Confidence 356888 999999999984
No 326
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=24.15 E-value=1.1e+02 Score=21.99 Aligned_cols=32 Identities=22% Similarity=0.241 Sum_probs=20.2
Q ss_pred EEcccCCCCh--HHHHHHHHHhhcCCCcEEEeeecC
Q 031524 71 VVQEWWGVDF--EIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 71 llHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
+..+-+|... -...+|..|+ ++|+.|+.+|.-
T Consensus 4 v~~~kgG~GKtt~a~~la~~l~--~~g~~vllvD~D 37 (179)
T cd02036 4 VTSGKGGVGKTTTTANLGTALA--QLGYKVVLIDAD 37 (179)
T ss_pred EeeCCCCCCHHHHHHHHHHHHH--hCCCeEEEEeCC
Confidence 3443334433 3456788888 888888888764
No 327
>PRK08339 short chain dehydrogenase; Provisional
Probab=24.08 E-value=1.3e+02 Score=23.50 Aligned_cols=31 Identities=6% Similarity=-0.088 Sum_probs=20.7
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
++++.|. ...--..+|+.|+ ++|+.|++.+-
T Consensus 10 ~~lItGa--s~gIG~aia~~l~--~~G~~V~~~~r 40 (263)
T PRK08339 10 LAFTTAS--SKGIGFGVARVLA--RAGADVILLSR 40 (263)
T ss_pred EEEEeCC--CCcHHHHHHHHHH--HCCCEEEEEeC
Confidence 4455542 2233345899999 99999998763
No 328
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=23.85 E-value=1.2e+02 Score=25.57 Aligned_cols=36 Identities=19% Similarity=0.143 Sum_probs=25.1
Q ss_pred CEEEEEc-ccCCCCh--HHHHHHHHHhhcCCCcEEEeeecC
Q 031524 67 PGIVVVQ-EWWGVDF--EIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 67 p~VIllH-g~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
..||.+. .=+|... ....+|..|+ ..|+.|+++|+-
T Consensus 104 ~~vI~v~n~KGGvGKTT~a~nLA~~La--~~G~rVLlID~D 142 (387)
T TIGR03453 104 LQVIAVTNFKGGSGKTTTAAHLAQYLA--LRGYRVLAIDLD 142 (387)
T ss_pred ceEEEEEccCCCcCHHHHHHHHHHHHH--hcCCCEEEEecC
Confidence 3455544 3345543 3457899999 899999999985
No 329
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=23.60 E-value=1.5e+02 Score=23.27 Aligned_cols=29 Identities=17% Similarity=0.056 Sum_probs=22.7
Q ss_pred ccCCCChH--HHHHHHHHhhcCCCcEEEeeecC
Q 031524 74 EWWGVDFE--IKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 74 g~~G~~~~--~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
|=+|.... ...+|..|+ ++|+.|+++|+-
T Consensus 7 gKGGVGKTT~~~nLA~~La--~~g~rVLliD~D 37 (268)
T TIGR01281 7 GKGGIGKSTTSSNLSVAFA--KLGKRVLQIGCD 37 (268)
T ss_pred cCCcCcHHHHHHHHHHHHH--hCCCeEEEEecC
Confidence 55566543 457899999 999999999985
No 330
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]
Probab=23.54 E-value=96 Score=23.96 Aligned_cols=24 Identities=17% Similarity=0.286 Sum_probs=16.3
Q ss_pred EEEEEcccCCCChHHHHHHHHHhhcCCCc
Q 031524 68 GIVVVQEWWGVDFEIKNHAVKISQLNPGF 96 (158)
Q Consensus 68 ~VIllHg~~G~~~~~~~~A~~La~l~~Gy 96 (158)
.|+++|= | .++...+++++. +.||
T Consensus 3 ~ilIld~--g-~q~~~li~r~~r--e~g~ 26 (198)
T COG0518 3 KILILDF--G-GQYLGLIARRLR--ELGY 26 (198)
T ss_pred EEEEEeC--C-CcHhHHHHHHHH--HcCC
Confidence 4666661 2 356667899998 7884
No 331
>CHL00175 minD septum-site determining protein; Validated
Probab=23.42 E-value=2e+02 Score=22.78 Aligned_cols=36 Identities=22% Similarity=0.225 Sum_probs=26.6
Q ss_pred CEEEEEcccCCCCh--HHHHHHHHHhhcCCCcEEEeeecC
Q 031524 67 PGIVVVQEWWGVDF--EIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 67 p~VIllHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
..|.+..+-+|... -...+|..|+ +.|+.|+.+|+-
T Consensus 16 ~vi~v~s~KGGvGKTt~a~nLA~~La--~~g~~vlliD~D 53 (281)
T CHL00175 16 RIIVITSGKGGVGKTTTTANLGMSIA--RLGYRVALIDAD 53 (281)
T ss_pred eEEEEEcCCCCCcHHHHHHHHHHHHH--hCCCeEEEEeCC
Confidence 35556666666654 3457899999 999999999975
No 332
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=23.34 E-value=1.6e+02 Score=24.28 Aligned_cols=34 Identities=18% Similarity=0.175 Sum_probs=26.7
Q ss_pred CCEEEEEcc-cCCCC-----hHHHHHHHHHhhcCCCcEEEee
Q 031524 66 APGIVVVQE-WWGVD-----FEIKNHAVKISQLNPGFKALIP 101 (158)
Q Consensus 66 ~p~VIllHg-~~G~~-----~~~~~~A~~La~l~~Gy~V~~~ 101 (158)
.|.|++.|| -.+.. +++..+++.|. ++|+.|+.+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~--~~~~~Vvl~ 214 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLI--AKGYQVVLF 214 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHH--HCCCEEEEe
Confidence 488999998 44332 47889999999 899888885
No 333
>PRK13143 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional
Probab=23.22 E-value=3.3e+02 Score=20.55 Aligned_cols=19 Identities=11% Similarity=0.335 Sum_probs=14.8
Q ss_pred HHHHHHHHhhcCCCcEEEeee
Q 031524 82 IKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 82 ~~~~A~~La~l~~Gy~V~~~D 102 (158)
...+++.|. +.|+.+...+
T Consensus 13 ~~~~~~~l~--~~G~~~~~~~ 31 (200)
T PRK13143 13 LRSVSKALE--RAGAEVVITS 31 (200)
T ss_pred HHHHHHHHH--HCCCeEEEEC
Confidence 367888898 8898888764
No 334
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=23.19 E-value=1.2e+02 Score=24.67 Aligned_cols=67 Identities=9% Similarity=-0.022 Sum_probs=36.5
Q ss_pred HHHHHHhhcCCCc-------EEEeeecCC--CCCCCCHH-HHHHHHcCCChhhHHHHHHHHHHHHHhCCCCcEEEEEec-
Q 031524 84 NHAVKISQLNPGF-------KALIPDLYR--GKVGLDTA-EAQHLMSGLDWPGAVKDIHASVNWLKANGSKKASINNLW- 152 (158)
Q Consensus 84 ~~A~~La~l~~Gy-------~V~~~D~~g--G~~~~~~~-~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~I~viG~S- 152 (158)
.+...+. ++|. +++++|-.| ...-.+.. ....+....+......++.++++.+ ++-.++|.|
T Consensus 43 ll~~~~~--~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~~L~eav~~~-----kPtvLIG~S~ 115 (255)
T PF03949_consen 43 LLVAAMV--REGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTNPEKDWGSLLEAVKGA-----KPTVLIGLSG 115 (255)
T ss_dssp HHHHHHH--CTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSSTTT--SSHHHHHHCH-------SEEEECSS
T ss_pred HHHHHHH--HhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCcccccccCHHHHHHhc-----CCCEEEEecC
Confidence 3455555 6687 599999876 21112222 2233444433322225677777765 345799999
Q ss_pred cCCcc
Q 031524 153 NFNRL 157 (158)
Q Consensus 153 ~GG~l 157 (158)
.||.+
T Consensus 116 ~~g~f 120 (255)
T PF03949_consen 116 QGGAF 120 (255)
T ss_dssp STTSS
T ss_pred CCCcC
Confidence 77754
No 335
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=23.15 E-value=1.8e+02 Score=24.56 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=26.3
Q ss_pred EEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 68 GIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 68 ~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
+.++.-...+....+..+|..|+ ++||.|..+.+.+
T Consensus 6 ~~~~~~~~~~~~~R~~~~a~~L~--~~G~~V~ii~~~~ 41 (415)
T cd03816 6 VCVLVLGDIGRSPRMQYHALSLA--KHGWKVDLVGYLE 41 (415)
T ss_pred EEEEEecccCCCHHHHHHHHHHH--hcCceEEEEEecC
Confidence 33344445566677788999999 9999998886654
No 336
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=23.07 E-value=1.6e+02 Score=26.19 Aligned_cols=40 Identities=15% Similarity=0.166 Sum_probs=32.8
Q ss_pred CCCCEEEEEcccCCCC--hHHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 64 EDAPGIVVVQEWWGVD--FEIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~--~~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
.+.|.+|++.|+-|.. ..+..+...|- .+|+.|..+..+.
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ld--prg~~v~~~~~P~ 78 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMD--PRGIETHAFGRPS 78 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhC--cCccEEEeCCCCC
Confidence 3578999999997664 57888999998 8999999987653
No 337
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=23.02 E-value=2e+02 Score=22.03 Aligned_cols=28 Identities=4% Similarity=-0.061 Sum_probs=19.9
Q ss_pred ChhhHHHHHHHHHHHHHhC-CCCcEEEEE
Q 031524 123 DWPGAVKDIHASVNWLKAN-GSKKASINN 150 (158)
Q Consensus 123 ~~~~~~~di~~av~~l~~~-~~~~I~viG 150 (158)
+.+...+.+...++.+++. |..+|.++-
T Consensus 72 ~~~~~~~~~~~fv~~iR~~hP~tPIllv~ 100 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAHPDTPILLVS 100 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT-SSS-EEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 4556777888889999876 566777765
No 338
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=22.96 E-value=62 Score=25.22 Aligned_cols=18 Identities=17% Similarity=0.241 Sum_probs=15.3
Q ss_pred HHHHHhhcCCCcEEEeeecC
Q 031524 85 HAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 85 ~A~~La~l~~Gy~V~~~D~~ 104 (158)
-+.+|| ++||.|+++|+-
T Consensus 51 da~~LA--~~G~~V~avD~s 68 (218)
T PRK13255 51 DMLWLA--EQGHEVLGVELS 68 (218)
T ss_pred hHHHHH--hCCCeEEEEccC
Confidence 466888 899999999974
No 339
>cd03144 GATase1_ScBLP_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Biotin-apoprotein ligase modifies proteins by covalently attaching biotin. ScBLP is known to biotinylate acety-CoA carboxylase and pyruvate carboxylase. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, the Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in a typical GATase1 domain is conserved.
Probab=22.82 E-value=45 Score=23.62 Aligned_cols=14 Identities=14% Similarity=-0.055 Sum_probs=11.6
Q ss_pred cEEEEEeccCCccC
Q 031524 145 KASINNLWNFNRLA 158 (158)
Q Consensus 145 ~I~viG~S~GG~lA 158 (158)
...++|.|+|+.+|
T Consensus 77 g~p~LGIClGAy~a 90 (114)
T cd03144 77 GGNYLGICAGAYLA 90 (114)
T ss_pred CCcEEEEecCccce
Confidence 45689999999875
No 340
>PRK06101 short chain dehydrogenase; Provisional
Probab=22.74 E-value=1.6e+02 Score=22.34 Aligned_cols=30 Identities=13% Similarity=0.071 Sum_probs=20.0
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeee
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D 102 (158)
.+++-|.. ..--..+++.|+ ++|+.|++.+
T Consensus 3 ~vlItGas--~giG~~la~~L~--~~G~~V~~~~ 32 (240)
T PRK06101 3 AVLITGAT--SGIGKQLALDYA--KQGWQVIACG 32 (240)
T ss_pred EEEEEcCC--cHHHHHHHHHHH--hCCCEEEEEE
Confidence 34555432 233346889998 8999999876
No 341
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=22.73 E-value=2.1e+02 Score=23.46 Aligned_cols=61 Identities=13% Similarity=0.177 Sum_probs=31.1
Q ss_pred HHHHHHhhcCCCcEEEeeecCC--CC-CCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCcc
Q 031524 84 NHAVKISQLNPGFKALIPDLYR--GK-VGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSKKASINNLWNFNRL 157 (158)
Q Consensus 84 ~~A~~La~l~~Gy~V~~~D~~g--G~-~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~l 157 (158)
+-|+.++ +.|-+++++++-- |. .+.+ ...+.++.++.+.+..+..++- .+.|.++.| ||-+
T Consensus 161 e~A~~M~--~AGaDiiv~H~GlT~gG~~Ga~--------~~~sl~~a~~~~~~i~~aa~~v-~~dii~l~h--GGPI 224 (268)
T PF09370_consen 161 EQARAMA--EAGADIIVAHMGLTTGGSIGAK--------TALSLEEAAERIQEIFDAARAV-NPDIIVLCH--GGPI 224 (268)
T ss_dssp HHHHHHH--HHT-SEEEEE-SS------------------S--HHHHHHHHHHHHHHHHCC--TT-EEEEE--CTTB
T ss_pred HHHHHHH--HcCCCEEEecCCccCCCCcCcc--------ccCCHHHHHHHHHHHHHHHHHh-CCCeEEEEe--CCCC
Confidence 5678888 8999999998732 11 1110 1234555566666666666554 234445444 6654
No 342
>PRK12828 short chain dehydrogenase; Provisional
Probab=22.67 E-value=1.4e+02 Score=22.18 Aligned_cols=31 Identities=13% Similarity=0.114 Sum_probs=21.0
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
.+++.|..| .--..+++.|+ ++|+.|++.+-
T Consensus 9 ~vlItGatg--~iG~~la~~l~--~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAITGGFG--GLGRATAAWLA--ARGARVALIGR 39 (239)
T ss_pred EEEEECCCC--cHhHHHHHHHH--HCCCeEEEEeC
Confidence 456666433 22346888888 89999998873
No 343
>PRK08265 short chain dehydrogenase; Provisional
Probab=22.65 E-value=1.4e+02 Score=23.03 Aligned_cols=31 Identities=16% Similarity=0.158 Sum_probs=21.2
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
++++.|. ...--..+++.|+ ++|+.|++.+-
T Consensus 8 ~vlItGa--s~gIG~~ia~~l~--~~G~~V~~~~r 38 (261)
T PRK08265 8 VAIVTGG--ATLIGAAVARALV--AAGARVAIVDI 38 (261)
T ss_pred EEEEECC--CChHHHHHHHHHH--HCCCEEEEEeC
Confidence 4555553 2333456899999 99999998763
No 344
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=22.65 E-value=57 Score=25.88 Aligned_cols=37 Identities=14% Similarity=0.171 Sum_probs=27.2
Q ss_pred CCEEEEEcccCCCC--hHHHHHHHHHhhcCCCcEEEeeecC
Q 031524 66 APGIVVVQEWWGVD--FEIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 66 ~p~VIllHg~~G~~--~~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
.|+||++.|+-+.. ..+..+...|- -+||.|.++.-+
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lD--PR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLD--PRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS---GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCC--CCeeEEEeCCCC
Confidence 47899999998775 45677888887 689999997644
No 345
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=22.63 E-value=64 Score=25.52 Aligned_cols=22 Identities=18% Similarity=-0.164 Sum_probs=15.5
Q ss_pred HHHHHHhCC-CCcEEEEEeccCC
Q 031524 134 SVNWLKANG-SKKASINNLWNFN 155 (158)
Q Consensus 134 av~~l~~~~-~~~I~viG~S~GG 155 (158)
..+.+++.+ -.+-.++|||+|=
T Consensus 72 l~~~l~~~g~i~p~~v~GhS~GE 94 (290)
T TIGR00128 72 LYLKLKEQGGLKPDFAAGHSLGE 94 (290)
T ss_pred HHHHHHHcCCCCCCEEeecCHHH
Confidence 344455555 6678999999984
No 346
>PRK10867 signal recognition particle protein; Provisional
Probab=22.61 E-value=5.2e+02 Score=22.55 Aligned_cols=37 Identities=14% Similarity=0.142 Sum_probs=28.1
Q ss_pred CCCEEEEEcccCCCCh--HHHHHHHHHhhcCC-CcEEEeeec
Q 031524 65 DAPGIVVVQEWWGVDF--EIKNHAVKISQLNP-GFKALIPDL 103 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~--~~~~~A~~La~l~~-Gy~V~~~D~ 103 (158)
..|.||++-|..|... ....+|.+|+ +. |+.|..+|.
T Consensus 98 ~~p~vI~~vG~~GsGKTTtaakLA~~l~--~~~G~kV~lV~~ 137 (433)
T PRK10867 98 KPPTVIMMVGLQGAGKTTTAGKLAKYLK--KKKKKKVLLVAA 137 (433)
T ss_pred CCCEEEEEECCCCCcHHHHHHHHHHHHH--HhcCCcEEEEEc
Confidence 3578888889888864 4457888998 77 987777664
No 347
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=22.26 E-value=1.7e+02 Score=24.15 Aligned_cols=38 Identities=18% Similarity=0.298 Sum_probs=27.8
Q ss_pred CCEEEEE-cccCC-CChHHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 66 APGIVVV-QEWWG-VDFEIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 66 ~p~VIll-Hg~~G-~~~~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
.+.+|++ |++++ ....-+.++.+|+ +.|+.|+-++-.+
T Consensus 4 ~~~~~~~~~~~w~~~~~~~qhl~~~~a--~~~~~vl~v~~~~ 43 (373)
T cd04950 4 RPDILVFSADDWDFLWQRPQHLAARLA--ERGNRVLYVEPPG 43 (373)
T ss_pred CCeEEEecccCcCCCCCCHHHHHHHHH--hCCCeEEEEeCCC
Confidence 3555555 65554 4556678999999 8999999888765
No 348
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=22.21 E-value=1.4e+02 Score=22.84 Aligned_cols=35 Identities=9% Similarity=-0.020 Sum_probs=23.4
Q ss_pred EEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecC
Q 031524 68 GIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 68 ~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
..+++-|..+...--..+++.|+ ++|+.|++.+-.
T Consensus 6 k~vlItGas~~~giG~~la~~l~--~~G~~vi~~~r~ 40 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLA--AKGIDIFFTYWS 40 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHH--HcCCcEEEEcCC
Confidence 34666665432233345899999 999999998643
No 349
>PHA01735 hypothetical protein
Probab=22.19 E-value=75 Score=20.70 Aligned_cols=20 Identities=30% Similarity=0.616 Sum_probs=15.8
Q ss_pred ChhhHHHHHHHHHHHHHhCC
Q 031524 123 DWPGAVKDIHASVNWLKANG 142 (158)
Q Consensus 123 ~~~~~~~di~~av~~l~~~~ 142 (158)
+-++-..|+.++++||+..+
T Consensus 27 sgeATtaDL~AA~d~Lk~Nd 46 (76)
T PHA01735 27 SGEATTADLRAACDWLKSND 46 (76)
T ss_pred cCcccHHHHHHHHHHHHHCC
Confidence 34455789999999999874
No 350
>COG2820 Udp Uridine phosphorylase [Nucleotide transport and metabolism]
Probab=22.14 E-value=67 Score=25.97 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=23.5
Q ss_pred CCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEe
Q 031524 65 DAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALI 100 (158)
Q Consensus 65 ~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~ 100 (158)
..|..|.-||+.|-...+ ..+.|+ ..|-.+|+
T Consensus 57 g~~v~v~StGIGgPSaaI--AvEEL~--~lGa~tfi 88 (248)
T COG2820 57 GKPVTVCSTGIGGPSAAI--AVEELA--RLGAKTFI 88 (248)
T ss_pred CeEEEEEecCCCCchHHH--HHHHHH--hcCCeEEE
Confidence 367888999998866543 345777 77988884
No 351
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=22.13 E-value=1.5e+02 Score=22.66 Aligned_cols=31 Identities=10% Similarity=-0.056 Sum_probs=19.9
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
.+++.|. ...--..++++|+ ++|+.|+..+-
T Consensus 12 ~vlItGa--~g~iG~~ia~~l~--~~G~~V~~~~r 42 (255)
T PRK07523 12 RALVTGS--SQGIGYALAEGLA--QAGAEVILNGR 42 (255)
T ss_pred EEEEECC--cchHHHHHHHHHH--HcCCEEEEEeC
Confidence 3445542 2233345888888 89999988753
No 352
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=22.13 E-value=1.6e+02 Score=23.61 Aligned_cols=81 Identities=11% Similarity=0.065 Sum_probs=44.0
Q ss_pred CEEEEEcccCCCChHH-HHHHHHHhhcCCC-cE--EEeeecCCCCCCCCHHHHHHHHcCCChhhHHHHHHHHHHHHHhC-
Q 031524 67 PGIVVVQEWWGVDFEI-KNHAVKISQLNPG-FK--ALIPDLYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKAN- 141 (158)
Q Consensus 67 p~VIllHg~~G~~~~~-~~~A~~La~l~~G-y~--V~~~D~~gG~~~~~~~~~~~~~~~~~~~~~~~di~~av~~l~~~- 141 (158)
.+=|++-|+.|.+..+ ..+-.++- ..| -. |++.=|+|++..-.++.. ...+....++..+.+.+.++++++.
T Consensus 37 kaDv~~RGysGynSRwALkvL~~if--p~~~s~~p~lvtVffGaNDs~l~~~~-~~~~hvPl~Ey~dNlr~iv~~lks~~ 113 (245)
T KOG3035|consen 37 KADVLLRGYSGYNSRWALKVLPEIF--PKGSSIQPVLVTVFFGANDSCLPEPS-SLGQHVPLEEYKDNLRKIVSHLKSLS 113 (245)
T ss_pred hhhhhhcccccchhHHHHHHhhhhc--cccccCCceEEEEEecCccccCCCCC-CCCCccCHHHHHHHHHHHHHHhhccC
Confidence 4456667777765432 22222222 222 22 555556775431111110 1123357778889999999999887
Q ss_pred CCCcEEEEE
Q 031524 142 GSKKASINN 150 (158)
Q Consensus 142 ~~~~I~viG 150 (158)
+..+|.+++
T Consensus 114 ~~~riIlit 122 (245)
T KOG3035|consen 114 PETRIILIT 122 (245)
T ss_pred CcceEEEec
Confidence 356777764
No 353
>TIGR02016 BchX chlorophyllide reductase iron protein subunit X. This model represents the X subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. This subunit is homologous to the nitrogenase component II, or "iron" protein.
Probab=21.98 E-value=1.6e+02 Score=23.97 Aligned_cols=29 Identities=14% Similarity=-0.033 Sum_probs=22.7
Q ss_pred ccCCCCh--HHHHHHHHHhhcCCCcEEEeeecC
Q 031524 74 EWWGVDF--EIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 74 g~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
|=+|... ....+|..|+ ++|+.|+.+|.-
T Consensus 7 gKGGvGKTT~a~nLA~~La--~~g~rVLlID~D 37 (296)
T TIGR02016 7 GKGGSGKSFTTTNLSHMMA--EMGKRVLQLGCD 37 (296)
T ss_pred CCCCCCHHHHHHHHHHHHH--HCCCeEEEEEec
Confidence 6556654 3457899999 899999999985
No 354
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated
Probab=21.93 E-value=3.7e+02 Score=23.32 Aligned_cols=30 Identities=13% Similarity=0.258 Sum_probs=23.8
Q ss_pred CCChHHHHHHHHHhhcCCCcEEEeeecCCCCC
Q 031524 77 GVDFEIKNHAVKISQLNPGFKALIPDLYRGKV 108 (158)
Q Consensus 77 G~~~~~~~~A~~La~l~~Gy~V~~~D~~gG~~ 108 (158)
|..+.....++.|. +.|..++++|--.|.+
T Consensus 149 g~~~~~~~~v~~lv--~aGvDvI~iD~a~g~~ 178 (404)
T PRK06843 149 SIDIDTIERVEELV--KAHVDILVIDSAHGHS 178 (404)
T ss_pred eCCHHHHHHHHHHH--hcCCCEEEEECCCCCC
Confidence 44566678889999 9999999999876554
No 355
>PRK06483 dihydromonapterin reductase; Provisional
Probab=21.91 E-value=1.6e+02 Score=22.14 Aligned_cols=31 Identities=6% Similarity=-0.112 Sum_probs=20.9
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
.+++.|. ...--..+++.|+ ++|+.|++.+-
T Consensus 4 ~vlItGa--s~gIG~~ia~~l~--~~G~~V~~~~r 34 (236)
T PRK06483 4 PILITGA--GQRIGLALAWHLL--AQGQPVIVSYR 34 (236)
T ss_pred eEEEECC--CChHHHHHHHHHH--HCCCeEEEEeC
Confidence 4555552 2333346888999 89999998763
No 356
>COG0853 PanD Aspartate 1-decarboxylase [Coenzyme metabolism]
Probab=21.91 E-value=3.2e+02 Score=19.80 Aligned_cols=52 Identities=19% Similarity=0.379 Sum_probs=40.5
Q ss_pred CCCCceeEEEee-CCc-eEEEEEEcCCCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 40 AASPFKKIQIQR-DDT-TFDAYVVGKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 40 ~~~~~~~i~i~~-~~~-~l~~~~~~p~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
+-.+.+.|+|-. ..| ++.+|+...+....+|.+.| .|.+++ +.|=.|+...|
T Consensus 36 gile~EkV~I~N~nNGaRf~TYvI~g~rGSg~I~lNG----------AAArl~--~~GD~VII~sy 89 (126)
T COG0853 36 GILENEKVDIVNVNNGARFSTYVIAGERGSGVICLNG----------AAARLV--QVGDLVIIMSY 89 (126)
T ss_pred CCCCCceEEEEECCCCcEEEEEEEEccCCCcEEEech----------HHHhhC--CCCCEEEEEEc
Confidence 455678888755 445 99999988666678888886 677899 89999999886
No 357
>COG1709 Predicted transcriptional regulator [Transcription]
Probab=21.78 E-value=2.1e+02 Score=22.98 Aligned_cols=33 Identities=24% Similarity=0.184 Sum_probs=22.8
Q ss_pred eEEEEEEcCCCCCEEEEEcccCCCChHHHHHHHHHh
Q 031524 55 TFDAYVVGKEDAPGIVVVQEWWGVDFEIKNHAVKIS 90 (158)
Q Consensus 55 ~l~~~~~~p~~~p~VIllHg~~G~~~~~~~~A~~La 90 (158)
++-+..+.| -+|.+|++||+.. .....+|-.+|
T Consensus 184 PMVAirV~~-lKP~aVVlHGi~~--~~vD~lAikiA 216 (241)
T COG1709 184 PMVAIRVSP-LKPAAVVLHGIPP--DNVDELAIKIA 216 (241)
T ss_pred ceEEEEccC-CCccEEEEecCCc--cchhHHHHHHH
Confidence 555555554 3599999998643 44667888888
No 358
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=21.77 E-value=5.6e+02 Score=22.60 Aligned_cols=35 Identities=17% Similarity=0.083 Sum_probs=25.1
Q ss_pred ChhhHHHHHHH-HHHHHHhCC---CCcEEEEEeccCCcc
Q 031524 123 DWPGAVKDIHA-SVNWLKANG---SKKASINNLWNFNRL 157 (158)
Q Consensus 123 ~~~~~~~di~~-av~~l~~~~---~~~I~viG~S~GG~l 157 (158)
+.+..++|... .++|+.+.| .+.+.|.|-|.+|..
T Consensus 143 ~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~Y 181 (454)
T KOG1282|consen 143 GDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHY 181 (454)
T ss_pred CcHHHHHHHHHHHHHHHHhChhhcCCCeEEeccccccee
Confidence 33445566554 457888775 678999999999975
No 359
>PRK06895 putative anthranilate synthase component II; Provisional
Probab=21.75 E-value=1.2e+02 Score=22.80 Aligned_cols=23 Identities=13% Similarity=-0.068 Sum_probs=17.0
Q ss_pred hHHHHHHHHHhhcCCCcEEEeeecC
Q 031524 80 FEIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 80 ~~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
.+...+++.|. +.|+.+...++.
T Consensus 12 sf~~~i~~~l~--~~g~~~~v~~~~ 34 (190)
T PRK06895 12 SFTFNLVDLIR--KLGVPMQVVNVE 34 (190)
T ss_pred chHHHHHHHHH--HcCCcEEEEECC
Confidence 34445899999 889888887754
No 360
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=21.61 E-value=1.9e+02 Score=22.46 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=24.8
Q ss_pred EEEEcccCCCCh--HHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 69 IVVVQEWWGVDF--EIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 69 VIllHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
|.+. |=+|... ....+|..|+ +.|+.|+.+|.--
T Consensus 4 iav~-~KGGvGKTT~~~nLA~~La--~~G~kVlliD~Dp 39 (270)
T cd02040 4 IAIY-GKGGIGKSTTTQNLSAALA--EMGKKVMIVGCDP 39 (270)
T ss_pred EEEE-eCCcCCHHHHHHHHHHHHH--hCCCeEEEEEcCC
Confidence 3444 5556554 3457899999 9999999999853
No 361
>cd01653 GATase1 Type 1 glutamine amidotransferase (GATase1)-like domain. Type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA. and, the A4 beta-galactosidase middle domain. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-depende
Probab=21.59 E-value=2.1e+02 Score=17.56 Aligned_cols=75 Identities=16% Similarity=0.166 Sum_probs=35.7
Q ss_pred HHHHHHHHHhhcCCCcEEEeeecCCCCCC--CCHHHHHHH-HcC-CChhhHHHHHHHHHHHHHhCCCCcEEEEEeccCCc
Q 031524 81 EIKNHAVKISQLNPGFKALIPDLYRGKVG--LDTAEAQHL-MSG-LDWPGAVKDIHASVNWLKANGSKKASINNLWNFNR 156 (158)
Q Consensus 81 ~~~~~A~~La~l~~Gy~V~~~D~~gG~~~--~~~~~~~~~-~~~-~~~~~~~~di~~av~~l~~~~~~~I~viG~S~GG~ 156 (158)
......+.|. +.|+.+.....-++... ....+...+ ... .............++++++.......++|.|.|..
T Consensus 13 ~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~d~lii~g~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~c~g~~ 90 (115)
T cd01653 13 ELASPLDALR--EAGAEVDVVSPDGGPVESDVDLDDYDGLILPGGPGTPDDLARDEALLALLREAAAAGKPILGICLGAQ 90 (115)
T ss_pred hhHHHHHHHH--HCCCeEEEEcCCCCceeccCChhccCEEEECCCCCchhhhccCHHHHHHHHHHHHcCCEEEEECchhH
Confidence 4556777787 77888888776553211 000000000 000 11111110013455555554334567889998865
Q ss_pred c
Q 031524 157 L 157 (158)
Q Consensus 157 l 157 (158)
+
T Consensus 91 ~ 91 (115)
T cd01653 91 L 91 (115)
T ss_pred h
Confidence 3
No 362
>PRK08703 short chain dehydrogenase; Provisional
Probab=21.49 E-value=1.7e+02 Score=22.12 Aligned_cols=30 Identities=10% Similarity=-0.031 Sum_probs=20.3
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeee
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D 102 (158)
.+++.|.. ..--..+++.|+ ++|+.|++.+
T Consensus 8 ~vlItG~s--ggiG~~la~~l~--~~g~~V~~~~ 37 (239)
T PRK08703 8 TILVTGAS--QGLGEQVAKAYA--AAGATVILVA 37 (239)
T ss_pred EEEEECCC--CcHHHHHHHHHH--HcCCEEEEEe
Confidence 45555532 233345888999 8999999876
No 363
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=21.40 E-value=1.2e+02 Score=25.88 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=25.2
Q ss_pred CCEEEEEc-ccCCCCh--HHHHHHHHHhhcCCCcEEEeeec
Q 031524 66 APGIVVVQ-EWWGVDF--EIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 66 ~p~VIllH-g~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
.+.||.+. .=+|... ....+|..|+ ..|+.|+++|+
T Consensus 105 ~~~vIai~n~KGGVGKTT~a~nLA~~LA--~~G~rVLlID~ 143 (388)
T PRK13705 105 FPPVIGVAAHKGGVYKTSVSVHLAQDLA--LKGLRVLLVEG 143 (388)
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHH--hcCCCeEEEcC
Confidence 34555554 3345543 3467899999 99999999996
No 364
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=21.25 E-value=14 Score=28.24 Aligned_cols=26 Identities=12% Similarity=0.115 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeccCCcc
Q 031524 129 KDIHASVNWLKANGSKKASINNLWNFNRL 157 (158)
Q Consensus 129 ~di~~av~~l~~~~~~~I~viG~S~GG~l 157 (158)
+.+...++|.+++ ....+|-|||+.+
T Consensus 85 ~El~~i~dwa~~~---v~stl~iCWgaqa 110 (175)
T cd03131 85 EELTEILDWAKTH---VTSTLFSCWAAMA 110 (175)
T ss_pred HHHHHHHHHHHHh---CcchHHHHHHHHH
Confidence 3477889999865 4678899998765
No 365
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=21.15 E-value=1.7e+02 Score=22.70 Aligned_cols=33 Identities=6% Similarity=-0.261 Sum_probs=21.4
Q ss_pred EEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeee
Q 031524 68 GIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 68 ~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D 102 (158)
.++++.|..+...--..+|+.|+ ++|+.|+..+
T Consensus 9 k~~lITGas~~~GIG~a~a~~la--~~G~~v~~~~ 41 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAK--KHGAELWFTY 41 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHH--HcCCEEEEEe
Confidence 45666664421123346888999 9999988764
No 366
>PRK14029 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma; Provisional
Probab=21.11 E-value=1.5e+02 Score=22.30 Aligned_cols=34 Identities=9% Similarity=-0.118 Sum_probs=25.9
Q ss_pred EEEcccCCCCh--HHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 70 VVVQEWWGVDF--EIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 70 IllHg~~G~~~--~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
|+++|..|..- .-.-+++.+. ..||.|...+-||
T Consensus 4 i~i~G~GGqGv~tag~iLa~a~~--~~G~~v~~~~~yg 39 (185)
T PRK14029 4 IRFHGRGGQGAVTAANILAEAAF--LEGKYVQAFPFFG 39 (185)
T ss_pred EEEEEECcchHHHHHHHHHHHHH--hcCCeEEEeeccC
Confidence 67888777643 3345677777 8999999999987
No 367
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=21.11 E-value=2.9e+02 Score=22.24 Aligned_cols=23 Identities=4% Similarity=0.192 Sum_probs=16.9
Q ss_pred hHHHHHHHHHhhcCCCcEEEeeecC
Q 031524 80 FEIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 80 ~~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
..+....+.|. +.||.|...+.-
T Consensus 14 ~~~~~~~~~L~--~~G~~v~~~~~~ 36 (282)
T cd07025 14 ERLERAIARLE--SLGLEVVVGPHV 36 (282)
T ss_pred HHHHHHHHHHH--hCCCEEEeccch
Confidence 45566677888 889998877654
No 368
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=21.06 E-value=1.4e+02 Score=24.02 Aligned_cols=34 Identities=21% Similarity=0.095 Sum_probs=25.0
Q ss_pred EEEEcccCCC---ChHHHHHHHHHhhcCCCcEEEeeecC
Q 031524 69 IVVVQEWWGV---DFEIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 69 VIllHg~~G~---~~~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
+|.+-|..|. ..-...+|..|+ +.|..|+++|+-
T Consensus 3 ~iai~s~kGGvG~TTltAnLA~aL~--~~G~~VlaID~d 39 (243)
T PF06564_consen 3 VIAIVSPKGGVGKTTLTANLAWALA--RLGESVLAIDLD 39 (243)
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHH--HCCCcEEEEeCC
Confidence 5556655433 334567899999 999999999985
No 369
>PRK07326 short chain dehydrogenase; Provisional
Probab=21.02 E-value=1.6e+02 Score=22.08 Aligned_cols=30 Identities=13% Similarity=0.001 Sum_probs=19.4
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeee
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D 102 (158)
.+++.|.. ..--..++++|+ ++|+.|++.+
T Consensus 8 ~ilItGat--g~iG~~la~~l~--~~g~~V~~~~ 37 (237)
T PRK07326 8 VALITGGS--KGIGFAIAEALL--AEGYKVAITA 37 (237)
T ss_pred EEEEECCC--CcHHHHHHHHHH--HCCCEEEEee
Confidence 44555532 233345788888 8899988876
No 370
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=21.00 E-value=1.7e+02 Score=21.94 Aligned_cols=26 Identities=15% Similarity=0.165 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEec
Q 031524 127 AVKDIHASVNWLKANGSKKASINNLW 152 (158)
Q Consensus 127 ~~~di~~av~~l~~~~~~~I~viG~S 152 (158)
..+.+....++|++.+..+|-|.||.
T Consensus 98 ~~~~L~~~a~~L~~~p~~~i~V~GHT 123 (190)
T COG2885 98 AQATLDELAKYLKKNPITRILVEGHT 123 (190)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEecC
Confidence 34567778888888777889999985
No 371
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=21.00 E-value=1.7e+02 Score=22.46 Aligned_cols=30 Identities=3% Similarity=-0.031 Sum_probs=20.7
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeee
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D 102 (158)
.+++.|. ...--..+++.|+ ++|+.|+..+
T Consensus 8 ~vlVtGa--s~gIG~~ia~~l~--~~G~~V~~~~ 37 (263)
T PRK06200 8 VALITGG--GSGIGRALVERFL--AEGARVAVLE 37 (263)
T ss_pred EEEEeCC--CchHHHHHHHHHH--HCCCEEEEEe
Confidence 4566653 2233346899999 9999999876
No 372
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=20.85 E-value=4.7e+02 Score=23.52 Aligned_cols=86 Identities=15% Similarity=0.152 Sum_probs=44.1
Q ss_pred EEEEcCC--CCCEEEEEcccCCCC-hHHHHHHHHHhhcCCCcEEEeeecCC-CCCCCCHHHHHHHHcCCChh-hHHHHHH
Q 031524 58 AYVVGKE--DAPGIVVVQEWWGVD-FEIKNHAVKISQLNPGFKALIPDLYR-GKVGLDTAEAQHLMSGLDWP-GAVKDIH 132 (158)
Q Consensus 58 ~~~~~p~--~~p~VIllHg~~G~~-~~~~~~A~~La~l~~Gy~V~~~D~~g-G~~~~~~~~~~~~~~~~~~~-~~~~di~ 132 (158)
.|.+.|+ +.|..|++.|..... .+...+++.|- .=|-- .-|.|= |..-. .+.-..+ .+.+-|.
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~aEGFEgy~MMk~Lg---~PfLL-~~DpRleGGaFY--------lGs~eyE~~I~~~I~ 346 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRPAEGFEGYFMMKRLG---APFLL-IGDPRLEGGAFY--------LGSDEYEQGIINVIQ 346 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcccCcchhHHHHHhcC---CCeEE-eeccccccceee--------eCcHHHHHHHHHHHH
Confidence 3444555 357778888875532 23445666664 22332 335552 22200 0000112 2445556
Q ss_pred HHHHHHHhCCCCcEEEEEeccCCc
Q 031524 133 ASVNWLKANGSKKASINNLWNFNR 156 (158)
Q Consensus 133 ~av~~l~~~~~~~I~viG~S~GG~ 156 (158)
..+++|.= ..+.+.+-|.|||-.
T Consensus 347 ~~L~~LgF-~~~qLILSGlSMGTf 369 (511)
T TIGR03712 347 EKLDYLGF-DHDQLILSGLSMGTF 369 (511)
T ss_pred HHHHHhCC-CHHHeeeccccccch
Confidence 66666522 256799999999954
No 373
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=20.74 E-value=1.8e+02 Score=22.08 Aligned_cols=32 Identities=19% Similarity=0.035 Sum_probs=21.5
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecC
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
++++-|. ...--..++++|+ ++|+.|++.+-.
T Consensus 4 ~vlItG~--sg~iG~~la~~L~--~~g~~vi~~~r~ 35 (256)
T PRK12745 4 VALVTGG--RRGIGLGIARALA--AAGFDLAINDRP 35 (256)
T ss_pred EEEEeCC--CchHHHHHHHHHH--HCCCEEEEEecC
Confidence 4555553 2333346889999 899999998743
No 374
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=20.73 E-value=2.3e+02 Score=23.77 Aligned_cols=37 Identities=14% Similarity=0.171 Sum_probs=26.6
Q ss_pred CCEEEEEcccCCCChH--HHHHHHHHhhcCCCcEEEeeecC
Q 031524 66 APGIVVVQEWWGVDFE--IKNHAVKISQLNPGFKALIPDLY 104 (158)
Q Consensus 66 ~p~VIllHg~~G~~~~--~~~~A~~La~l~~Gy~V~~~D~~ 104 (158)
...+|.+.|-.|.... ...+|..|+ +.|+.|+.+|.-
T Consensus 30 ~~~ii~v~gkgG~GKSt~a~nLa~~la--~~g~rVllid~D 68 (329)
T cd02033 30 KTQIIAIYGKGGIGKSFTLANLSYMMA--QQGKRVLLIGCD 68 (329)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH--HCCCcEEEEEee
Confidence 4456655676666543 457899999 899999998763
No 375
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=20.64 E-value=1.9e+02 Score=23.08 Aligned_cols=34 Identities=12% Similarity=0.021 Sum_probs=23.4
Q ss_pred CEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeee
Q 031524 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 67 p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D 102 (158)
..|+++-|-+.+...-.-.|+.|. +.||.|.++-
T Consensus 61 ~~V~VlcG~GNNGGDGlv~AR~L~--~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGNNGGDGLVAARHLA--HFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCCCchhHHHHHHHHH--HCCCeEEEEE
Confidence 346666665444455556899998 8999988763
No 376
>COG0794 GutQ Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane]
Probab=20.62 E-value=1.4e+02 Score=23.31 Aligned_cols=76 Identities=18% Similarity=0.233 Sum_probs=43.5
Q ss_pred EEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC---CCCCC-CHHHHHHHHcCCChhhHHHHHHHHHHHHHhCCCCc
Q 031524 70 VVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR---GKVGL-DTAEAQHLMSGLDWPGAVKDIHASVNWLKANGSKK 145 (158)
Q Consensus 70 IllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g---G~~~~-~~~~~~~~~~~~~~~~~~~di~~av~~l~~~~~~~ 145 (158)
|++-|.+-+.---+.+|-+|+ .-|+.++.+..-. |..+. .+++ ..--..+...-+.+..++.++|+.+..-
T Consensus 42 v~V~G~GkSG~Igkk~Aa~L~--s~G~~a~fv~p~ea~hgdlg~i~~~D---vviaiS~SGeT~el~~~~~~aK~~g~~l 116 (202)
T COG0794 42 VFVTGVGKSGLIGKKFAARLA--STGTPAFFVGPAEALHGDLGMITPGD---VVIAISGSGETKELLNLAPKAKRLGAKL 116 (202)
T ss_pred EEEEcCChhHHHHHHHHHHHH--ccCCceEEecCchhccCCccCCCCCC---EEEEEeCCCcHHHHHHHHHHHHHcCCcE
Confidence 445555433444567999999 8899999987431 21110 1110 1111234445577888899998875555
Q ss_pred EEEEE
Q 031524 146 ASINN 150 (158)
Q Consensus 146 I~viG 150 (158)
|++.+
T Consensus 117 iaiT~ 121 (202)
T COG0794 117 IAITS 121 (202)
T ss_pred EEEeC
Confidence 55543
No 377
>PRK08643 acetoin reductase; Validated
Probab=20.49 E-value=1.7e+02 Score=22.29 Aligned_cols=19 Identities=32% Similarity=0.391 Sum_probs=15.8
Q ss_pred HHHHHHHhhcCCCcEEEeeec
Q 031524 83 KNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 83 ~~~A~~La~l~~Gy~V~~~D~ 103 (158)
..+++.|+ ++|+.|+..+.
T Consensus 16 ~~la~~l~--~~G~~v~~~~r 34 (256)
T PRK08643 16 FAIAKRLV--EDGFKVAIVDY 34 (256)
T ss_pred HHHHHHHH--HCCCEEEEEeC
Confidence 46888999 89999998874
No 378
>PRK06114 short chain dehydrogenase; Provisional
Probab=20.42 E-value=1.3e+02 Score=23.10 Aligned_cols=21 Identities=19% Similarity=0.210 Sum_probs=16.6
Q ss_pred HHHHHHHHHhhcCCCcEEEeeec
Q 031524 81 EIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 81 ~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
--..+|++|+ ++|+.|++.+-
T Consensus 20 IG~~ia~~l~--~~G~~v~~~~r 40 (254)
T PRK06114 20 IGQRIAIGLA--QAGADVALFDL 40 (254)
T ss_pred HHHHHHHHHH--HCCCEEEEEeC
Confidence 3346889999 89999998864
No 379
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=20.40 E-value=2.2e+02 Score=24.75 Aligned_cols=40 Identities=23% Similarity=0.274 Sum_probs=31.3
Q ss_pred CCCCEEEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeecCC
Q 031524 64 EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR 105 (158)
Q Consensus 64 ~~~p~VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~~g 105 (158)
+++.++|++=|=-|..+.|.-.|..|| +.||.|-.+-|.+
T Consensus 11 ~k~ra~vvVLGDvGRSPRMqYHA~Sla--~~gf~VdliGy~~ 50 (444)
T KOG2941|consen 11 KKKRAIVVVLGDVGRSPRMQYHALSLA--KLGFQVDLIGYVE 50 (444)
T ss_pred ccceEEEEEecccCCChHHHHHHHHHH--HcCCeEEEEEecC
Confidence 445566666665677888889999999 9999999887765
No 380
>PRK06194 hypothetical protein; Provisional
Probab=20.39 E-value=1.7e+02 Score=22.79 Aligned_cols=31 Identities=16% Similarity=0.002 Sum_probs=20.6
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
.+++.|.. ..--..+++.|+ ++|+.|++.|-
T Consensus 8 ~vlVtGas--ggIG~~la~~l~--~~G~~V~~~~r 38 (287)
T PRK06194 8 VAVITGAA--SGFGLAFARIGA--ALGMKLVLADV 38 (287)
T ss_pred EEEEeCCc--cHHHHHHHHHHH--HCCCEEEEEeC
Confidence 35555532 222345888898 89999998874
No 381
>PRK05876 short chain dehydrogenase; Provisional
Probab=20.25 E-value=1.7e+02 Score=23.06 Aligned_cols=31 Identities=10% Similarity=-0.009 Sum_probs=20.5
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
++++.|.. ..--..+++.|+ ++|+.|+..+-
T Consensus 8 ~vlVTGas--~gIG~ala~~La--~~G~~Vv~~~r 38 (275)
T PRK05876 8 GAVITGGA--SGIGLATGTEFA--RRGARVVLGDV 38 (275)
T ss_pred EEEEeCCC--chHHHHHHHHHH--HCCCEEEEEeC
Confidence 34555532 222345899999 99999998763
No 382
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=20.22 E-value=1.8e+02 Score=22.16 Aligned_cols=35 Identities=11% Similarity=0.098 Sum_probs=21.9
Q ss_pred CCCEEEEEcccCCCC-----hHHHHHHHHHhhcCCCcEEEee
Q 031524 65 DAPGIVVVQEWWGVD-----FEIKNHAVKISQLNPGFKALIP 101 (158)
Q Consensus 65 ~~p~VIllHg~~G~~-----~~~~~~A~~La~l~~Gy~V~~~ 101 (158)
+.+.|++.+|..... +.+..+++.|. +.||.|+.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~--~~~~~vvl~ 143 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLK--ERGYRVVLL 143 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHC--CCT-EEEE-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHH--hhCceEEEE
Confidence 357788888754422 45788999999 899888763
No 383
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=20.15 E-value=1.7e+02 Score=22.32 Aligned_cols=31 Identities=13% Similarity=0.030 Sum_probs=20.4
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeeec
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D~ 103 (158)
++++.|. ...--..++++|+ ++|+.|+..+-
T Consensus 11 ~~lItGa--s~giG~~ia~~L~--~~G~~vvl~~r 41 (254)
T PRK08085 11 NILITGS--AQGIGFLLATGLA--EYGAEIIINDI 41 (254)
T ss_pred EEEEECC--CChHHHHHHHHHH--HcCCEEEEEcC
Confidence 4555552 2333346888888 88999988763
No 384
>COG2312 Erythromycin esterase homolog [General function prediction only]
Probab=20.04 E-value=1.4e+02 Score=25.87 Aligned_cols=83 Identities=19% Similarity=0.223 Sum_probs=44.9
Q ss_pred CCEEEEEccc-CCCChHH---HHHHHHHhhcCCCcEEEeeecC--CCC--------CCCCHHHHHHHHcCCChhh-HHHH
Q 031524 66 APGIVVVQEW-WGVDFEI---KNHAVKISQLNPGFKALIPDLY--RGK--------VGLDTAEAQHLMSGLDWPG-AVKD 130 (158)
Q Consensus 66 ~p~VIllHg~-~G~~~~~---~~~A~~La~l~~Gy~V~~~D~~--gG~--------~~~~~~~~~~~~~~~~~~~-~~~d 130 (158)
.+-||.+-+. -|..+.+ ..+-++|.+ +.||.++++.-- ... ...++.+. +..+...- ...+
T Consensus 44 ~~RiV~LGE~sHGt~e~~~~k~rm~r~Lve-e~Gf~~iA~EA~~~d~~av~~Yv~~~~~d~~~~---~~~~~~~~Wr~~~ 119 (405)
T COG2312 44 DARIVLLGEPSHGTGEFFAFKARMFRALVE-ELGFRAIAFEADFPDAQAVNRYVRGGGDDLREA---MDGFIFWVWRRAE 119 (405)
T ss_pred CCeEEEecCCCCCccHHHHHHHHHHHHHHH-HhCcceEEeccCcHHHHHHHHHHhccCCChHHH---HhccchhhhhHHH
Confidence 4566666432 2334333 346666655 789999998532 111 01122222 22221111 1247
Q ss_pred HHHHHHHHHhCC-----CCcEEEEEec
Q 031524 131 IHASVNWLKANG-----SKKASINNLW 152 (158)
Q Consensus 131 i~~av~~l~~~~-----~~~I~viG~S 152 (158)
+...++|++.+. ..++++.|+-
T Consensus 120 v~~lv~wlr~~na~r~~~~~~~f~g~D 146 (405)
T COG2312 120 VRDLVEWLREFNAARSAGPQVGFYGFD 146 (405)
T ss_pred HHHHHHHHHHHhccCCcccccceeecc
Confidence 888899998862 4678888874
No 385
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=20.03 E-value=1.7e+02 Score=22.37 Aligned_cols=30 Identities=13% Similarity=0.039 Sum_probs=20.6
Q ss_pred EEEEcccCCCChHHHHHHHHHhhcCCCcEEEeee
Q 031524 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 69 VIllHg~~G~~~~~~~~A~~La~l~~Gy~V~~~D 102 (158)
.+++.|.. ..--..+++.|+ ++|+.|++.|
T Consensus 8 ~vlItGas--~~iG~~ia~~l~--~~G~~v~~~~ 37 (257)
T PRK07067 8 VALLTGAA--SGIGEAVAERYL--AEGARVVIAD 37 (257)
T ss_pred EEEEeCCC--chHHHHHHHHHH--HcCCEEEEEc
Confidence 34555522 233346899999 9999999886
No 386
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=20.00 E-value=1.4e+02 Score=21.45 Aligned_cols=24 Identities=17% Similarity=0.326 Sum_probs=20.3
Q ss_pred CCChHHHHHHHHHhhcCCCcEEEeee
Q 031524 77 GVDFEIKNHAVKISQLNPGFKALIPD 102 (158)
Q Consensus 77 G~~~~~~~~A~~La~l~~Gy~V~~~D 102 (158)
|.......+++.|. +.|+.|....
T Consensus 14 G~~~~~~~l~~~L~--~~g~~v~v~~ 37 (229)
T cd01635 14 GVELVLLDLAKALA--RRGHEVEVVA 37 (229)
T ss_pred CchhHHHHHHHHHH--HcCCeEEEEE
Confidence 56677889999999 8899998876
Done!