BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031532
(158 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CPW2|ADXL_MOUSE Adrenodoxin-like protein, mitochondrial OS=Mus musculus GN=Fdx1l
PE=2 SV=1
Length = 174
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 29 RSSATAAPSAKVADRIVHLFAIDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEID 88
R+ AA S ++ +V++ +D G++ P+ G G +L G+ + E
Sbjct: 43 RAGEEAADSPELPRDVVNVVFVDRSGKRIPVRGKVGDNVLYLAQRHGVDLEGA--CEASL 100
Query: 89 ACSAECEVNIAQEWLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVA 148
ACS C V +++ LD LPP E+ +L A +L +SRLGCQ+VLT +LEG+ A
Sbjct: 101 ACST-CHVYVSEAHLDLLPPPEEREDDML---DMAPLLQENSRLGCQIVLTPELEGVEFA 156
Query: 149 VPE 151
+P+
Sbjct: 157 LPK 159
>sp|Q05B51|ADXL_BOVIN Adrenodoxin-like protein, mitochondrial OS=Bos taurus GN=FDX1L PE=2
SV=1
Length = 186
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 44 IVHLFAIDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQEWL 103
+V++ +D GQ+ P+ G G +L GL + E ACS C V ++++ L
Sbjct: 70 VVNVVFVDRSGQRIPVSGRVGDNVLHLAQRHGLDLEGA--CEASLACST-CHVYVSEDHL 126
Query: 104 DRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVPE 151
D LPP E+ +L A +L +SRLGCQ+VLT +LEG +P+
Sbjct: 127 DLLPPPDEREDDML---DMAPLLQENSRLGCQIVLTPELEGAEFTLPK 171
>sp|Q6P4F2|ADXL_HUMAN Adrenodoxin-like protein, mitochondrial OS=Homo sapiens GN=FDX1L
PE=1 SV=1
Length = 183
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 44 IVHLFAIDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQEWL 103
+V++ +D GQ+ P+ G G +L G+ + E ACS C V ++++ L
Sbjct: 67 VVNVVFVDRSGQRIPVSGRVGDNVLHLAQRHGVDLEGA--CEASLACST-CHVYVSEDHL 123
Query: 104 DRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVPE 151
D LPP E+ +L A +L +SRLGCQ+VLT +LEG +P+
Sbjct: 124 DLLPPPEEREDDML---DMAPLLQENSRLGCQIVLTPELEGAEFTLPK 168
>sp|P37193|ADXH_DROME Adrenodoxin-like protein, mitochondrial OS=Drosophila melanogaster
GN=Fdxh PE=2 SV=3
Length = 172
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 9 LSSQIHRLPSLSP---LSKSLTHRSSATAAPSAKVADRIVHLFAIDPDGQKRPIIGLAGQ 65
+S QI + +P L ++ R K D IV++ +D DG++ + G G
Sbjct: 18 ISKQIAKPAFYTPHNALHTTIPRRHGEFEWQDPKSTDEIVNITYVDKDGKRTKVQGKVGD 77
Query: 66 TLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQEWLDRLPPRSYEEEYVLKRNSRARV 125
+L G+ + E AC+ C V + ++L +L +E+ +L A
Sbjct: 78 NVLYLAHRHGIEMEGA--CEASLACTT-CHVYVQHDYLQKLKEAEEQEDDLL---DMAPF 131
Query: 126 LNLHSRLGCQVVLTHDLEGMVVAVPE 151
L +SRLGCQ++L +EGM + +P+
Sbjct: 132 LRENSRLGCQILLDKSMEGMELELPK 157
>sp|Q08C57|ADXL_DANRE Adrenodoxin-like protein, mitochondrial OS=Danio rerio GN=fdx1l
PE=2 SV=1
Length = 195
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 29 RSSATAAP--SAKVADRIVHLFAIDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEE 86
+S ++AP A + IV++ ID G++ P+ G +L G+ + E
Sbjct: 62 QSEDSSAPEEDAHAQEHIVNVVYIDRSGRRIPVQARVGDNVLYLAHKHGIDLEGA--CEA 119
Query: 87 IDACSAECEVNIAQEWLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMV 146
ACS C V ++ DRLP E+ +L A +L +SRLGCQ++LT +L+GM
Sbjct: 120 SLACST-CHVYVSSGHYDRLPEPEEREDDML---DMAPLLQENSRLGCQIILTPELDGME 175
Query: 147 VAVPE 151
+ +P+
Sbjct: 176 LTLPK 180
>sp|P43493|THCC_RHOER Rhodocoxin OS=Rhodococcus erythropolis GN=thcC PE=1 SV=2
Length = 107
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 50 IDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQEWLDRLPPR 109
+ PDG K + G+ +++A +G+ + + A A C V + W D+ P
Sbjct: 7 VHPDGTKHEVEVPTGKRVMQAAIGAGIDGIVAECGGQ--AMCATCHVYVESPWADKFPSI 64
Query: 110 SYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVPE 151
S EE+ +L R SRL CQ+V++ D++G++V +PE
Sbjct: 65 SEEEDEMLDDTVSPR--TEASRLSCQLVVSDDVDGLIVRLPE 104
>sp|Q5FWQ0|ADXL_XENLA Adrenodoxin-like protein, mitochondrial OS=Xenopus laevis GN=fdx1l
PE=2 SV=1
Length = 193
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 38 AKVADRIVHLFAIDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAECEVN 97
A++++ V + +D GQ+ P+ G G+++L L + I+ E ACS C V
Sbjct: 71 AELSEETVEVVFLDRSGQRIPVKGKVGESVL-CLAHRYNIELEG-ACESSLACST-CHVY 127
Query: 98 IAQEWLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVPE 151
+ E+ +LP E+ +L A +L +SRLGCQ++LT L G +P+
Sbjct: 128 VNTEYFHKLPEPDEREDDML---DMAPLLQENSRLGCQIILTKQLNGAEFTLPK 178
>sp|P00259|PUTX_PSEPU Putidaredoxin OS=Pseudomonas putida GN=camB PE=1 SV=3
Length = 107
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 53 DGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQEWLDRLPPRSYE 112
DG +R + G +L++A ++G+ D A A C V + + + D++P +
Sbjct: 10 DGTRRELDVADGVSLMQAAVSNGIYDIVGDCGGS--ASCATCHVYVNEAFTDKVPAANER 67
Query: 113 EEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVPEPRPW 155
E +L+ + L +SRL CQ+++T +L+G+VV VP+ R W
Sbjct: 68 EIGMLECVTAE--LKPNSRLCCQIIMTPELDGIVVDVPD-RQW 107
>sp|P00257|ADX_BOVIN Adrenodoxin, mitochondrial OS=Bos taurus GN=FDX1 PE=1 SV=2
Length = 186
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 42 DRIVHLFAIDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQE 101
D+I F I+ DG+ G G +LL + + L E ACS C + Q
Sbjct: 63 DKITVHF-INRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACST-CHLIFEQH 120
Query: 102 WLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVPEP 152
++L + EE +L A L SRLGCQ+ LT ++ M V VP+
Sbjct: 121 IFEKLEAITDEENDML---DLAYGLTDRSRLGCQICLTKAMDNMTVRVPDA 168
>sp|P10109|ADX_HUMAN Adrenodoxin, mitochondrial OS=Homo sapiens GN=FDX1 PE=1 SV=1
Length = 184
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 5/111 (4%)
Query: 42 DRIVHLFAIDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQE 101
D+I F I+ DG+ G G +LL + + L E ACS C +
Sbjct: 65 DKITVHF-INRDGETLTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACST-CHLIFEDH 122
Query: 102 WLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVPEP 152
++L + EE +L A L SRLGCQ+ LT ++ M V VPE
Sbjct: 123 IYEKLDAITDEENDMLDL---AYGLTDRSRLGCQICLTKSMDNMTVRVPET 170
>sp|P13216|ADX_CHICK Adrenodoxin, mitochondrial (Fragment) OS=Gallus gallus GN=FDX1 PE=1
SV=1
Length = 143
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 31 SATAAPSAKVADRIVHLFAIDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDAC 90
SA AA S++ D+I F I+ DG K G G +LL + + L E AC
Sbjct: 15 SARAACSSE--DKITVHF-INRDGDKLTAKGKPGDSLLDVVVENNLDIDGFGACEGTLAC 71
Query: 91 SAECEVNIAQEWLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVP 150
S C + ++L + EE +L A L SRLGCQ+ L ++ M V VP
Sbjct: 72 ST-CHLIFEDHIFEKLDAITDEEMDML---DLAYGLTETSRLGCQICLKKSMDNMTVRVP 127
Query: 151 E 151
E
Sbjct: 128 E 128
>sp|P00258|ADX_PIG Adrenodoxin, mitochondrial OS=Sus scrofa GN=FDX1 PE=1 SV=2
Length = 186
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 5/111 (4%)
Query: 42 DRIVHLFAIDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQE 101
D+I F I+ DG+ G G +LL + + L E ACS C +
Sbjct: 63 DKITVHF-INRDGKTLTTQGKVGDSLLDVVIENNLDIDGFGACEGTLACST-CHLIFEDH 120
Query: 102 WLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVPEP 152
++L + EE +L A L SRLGCQ+ LT ++ M V VPE
Sbjct: 121 IFEKLEAITDEENDML---DLAYGLTDRSRLGCQICLTKAMDNMTVRVPEA 168
>sp|P29330|ADX_SHEEP Adrenodoxin OS=Ovis aries GN=FDX1 PE=1 SV=2
Length = 128
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 42 DRIVHLFAIDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQE 101
D++ F I+ DG+ G G +LL + + L E ACS C + Q
Sbjct: 5 DKVTVNF-INRDGETLTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACST-CHLIFEQH 62
Query: 102 WLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVPEP 152
++L + EE +L A L SRLGCQ+ LT ++ M V VP+
Sbjct: 63 IYEKLEAITDEENDML---DLAYGLTDRSRLGCQICLTKAMDNMTVRVPDA 110
>sp|P37098|FER2_CAUCR 2Fe-2S ferredoxin OS=Caulobacter crescentus (strain ATCC 19089 /
CB15) GN=fdxB PE=3 SV=1
Length = 106
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 89 ACS-AECEVNIAQEWLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVV 147
AC+ A C V + + WLD+ +S EE +L A + +SRL CQ+ ++ L+G+VV
Sbjct: 43 ACACATCHVYVDEAWLDKTGDKSAMEESML---DFAENVEPNSRLSCQIKVSDALDGLVV 99
Query: 148 AVPEPR 153
+PE +
Sbjct: 100 RLPESQ 105
>sp|Q92J08|FER2_RICCN 2Fe-2S ferredoxin OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=fdxB PE=3 SV=1
Length = 112
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 89 ACSAECEVNIAQEWLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVA 148
AC A C V + +E+ ++L + EE +L A L SRLGCQ++LT +L+G+ V
Sbjct: 47 AC-ATCHVILEEEFYNKLKKPTEAEEDML---DLAFGLTDTSRLGCQIILTEELDGIKVR 102
Query: 149 VP 150
+P
Sbjct: 103 IP 104
>sp|P24483|ADX_RAT Adrenodoxin, mitochondrial OS=Rattus norvegicus GN=Fdx1 PE=2 SV=1
Length = 188
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Query: 53 DGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQEWLDRLPPRSYE 112
DG+ G G +LL + + L E ACS C + ++L + E
Sbjct: 79 DGETLTTKGKVGDSLLDVVIENNLDIDGFGACEGTLACST-CHLIFEDHIYEKLDAITDE 137
Query: 113 EEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVPE 151
E +L A L SRLGCQV LT ++ M V VPE
Sbjct: 138 ENDML---DLAFGLTNRSRLGCQVCLTKAMDNMTVRVPE 173
>sp|Q12184|ADRX_YEAST Adrenodoxin homolog, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAH1 PE=1 SV=1
Length = 172
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 53 DGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAEC-----EVNIAQEWLDRLP 107
DG ++ G+T+L H L+ AC C V + ++ D LP
Sbjct: 69 DGSQKTYEVCEGETILDI--------AQGHNLDMEGACGGSCACSTCHVIVDPDYYDALP 120
Query: 108 PRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVPE 151
+E +L A L SRLGCQ+ ++ D++G+ VA+P+
Sbjct: 121 EPEDDENDML---DLAYGLTETSRLGCQIKMSKDIDGIRVALPQ 161
>sp|Q9AKC4|FER2_RICTY 2Fe-2S ferredoxin OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=fdxB PE=3 SV=1
Length = 117
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 89 ACSAECEVNIAQEWLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVA 148
AC A C V + +E+ ++L + EE +L A L SRLGCQ++LT +L+G+ V
Sbjct: 47 AC-ATCHVMLEEEFYNKLKKPTEAEEDML---DLAFGLTDTSRLGCQIILTEELDGIKVR 102
Query: 149 VP 150
+P
Sbjct: 103 LP 104
>sp|Q9AKM6|FER2_RICMO 2Fe-2S ferredoxin OS=Rickettsia montana GN=fdxB PE=3 SV=1
Length = 112
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 89 ACSAECEVNIAQEWLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVA 148
AC A C V + +E+ ++L + EE +L A L SRLGCQ++LT +L+G+ V
Sbjct: 47 AC-ATCHVILEEEFYNKLKKPTEAEEDML---DLAFGLTDTSRLGCQIILTEELDGIKVR 102
Query: 149 VP 150
+P
Sbjct: 103 LP 104
>sp|P46656|ADX_MOUSE Adrenodoxin, mitochondrial OS=Mus musculus GN=Fdx1 PE=2 SV=1
Length = 188
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Query: 53 DGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQEWLDRLPPRSYE 112
DG+ G G +LL + + L E ACS C + ++L + E
Sbjct: 79 DGETLTTKGKIGDSLLDVVIENNLDIDGFGACEGTLACST-CHLIFEDHIYEKLDAITDE 137
Query: 113 EEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVPE 151
E +L A L SRLGCQV LT ++ M V VPE
Sbjct: 138 ENDML---DLAFGLTDRSRLGCQVCLTKAMDNMTVRVPE 173
>sp|Q4UKL2|FER2_RICFE 2Fe-2S ferredoxin OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=fdxB PE=3 SV=1
Length = 112
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 89 ACSAECEVNIAQEWLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVA 148
AC A C V + +E+ ++L + EE +L A L SRLGCQ++LT +L+G+ V
Sbjct: 47 AC-ATCHVILEEEFYNKLKKPTEAEEDML---DLAFGLTDTSRLGCQIILTEELDGIKVR 102
Query: 149 VP 150
+P
Sbjct: 103 LP 104
>sp|Q9ZDW6|FER2_RICPR 2Fe-2S ferredoxin OS=Rickettsia prowazekii (strain Madrid E)
GN=fdxB PE=3 SV=1
Length = 112
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 89 ACSAECEVNIAQEWLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVA 148
AC A C V + +E+ ++L + EE +L A L SRLGCQ++LT +L+G+ V
Sbjct: 47 AC-ATCHVMLEEEFYNKLKKPTEAEEDML---DLAFGLTDTSRLGCQIILTEELDGIKVR 102
Query: 149 VP 150
+P
Sbjct: 103 LP 104
>sp|Q9AKH1|FER2_RICRI 2Fe-2S ferredoxin OS=Rickettsia rickettsii GN=fdxB PE=3 SV=1
Length = 112
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 89 ACSAECEVNIAQEWLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVA 148
AC A C V + +E+ ++L + EE +L A L SRLGCQ++LT +L+G+ V
Sbjct: 47 AC-ATCHVILEEEFYNKLKKPTEAEEDML---DLAFGLTDTSRLGCQIILTEELDGIKVH 102
Query: 149 VP 150
+P
Sbjct: 103 LP 104
>sp|Q10361|ETP1_SCHPO Electron transfer protein 1, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=etp1 PE=1 SV=2
Length = 616
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 89 ACSAECEVNIAQEWLDRLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVA 148
ACS C V + E + L P +EE +L A L SRLGCQV+L DL+G+ V
Sbjct: 546 ACST-CHVIVDPEHYELLDPPEEDEEDML---DLAFGLEETSRLGCQVLLRKDLDGIRVR 601
Query: 149 VP 150
+P
Sbjct: 602 IP 603
>sp|P33007|TERPB_PSESP Terpredoxin OS=Pseudomonas sp. GN=terPB PE=1 SV=2
Length = 106
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 64 GQTLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQEWLDRLPPRSYEEEYVLKRNSRA 123
GQ+L++ T +G+ P A C + I W++ + + +E +L+ S
Sbjct: 21 GQSLMEVATQNGV--PGIVAECGGSCVCATCRIEIEDAWVEIVGEANPDENDLLQ--STG 76
Query: 124 RVLNLHSRLGCQVVLTHDLEGMVVAVPEP 152
+ +RL CQV + ++G++V VP P
Sbjct: 77 EPMTAGTRLSCQVFIDPSMDGLIVRVPLP 105
>sp|D5IGG4|CARAC_SPHSX Ferredoxin CarAc OS=Sphingomonas sp. GN=carAc PE=1 SV=1
Length = 109
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 63 AGQTLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQEWLDRL-PPRSYEEEYVLKRNS 121
AG +L++A +G +D AC A C V + EWLD L PP E+E +
Sbjct: 23 AGVSLMEAAVLNG-VDGIEAVCGGACAC-ATCHVYVGPEWLDALKPPSETEDEMLDCVAE 80
Query: 122 RARVLNLHSRLGCQV 136
RA HSRL CQ+
Sbjct: 81 RAP----HSRLSCQI 91
>sp|P80306|FER6_RHOCA Ferredoxin-6 OS=Rhodobacter capsulatus PE=1 SV=1
Length = 106
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 47 LFAIDPDGQKRPIIGLAGQTLLKALTNSGL--IDPASHRLEEIDACSAECEVNIAQEWLD 104
+ I+ +G + + G T+++A ++G+ ID ACS C + W+D
Sbjct: 3 IIFIEHNGTRHEVEAKPGLTVMEAARDNGVPGIDA---DCGGACACST-CHAYVDPAWVD 58
Query: 105 RLPPRSYEEEYVLKRNSRARVLNLHSRLGCQVVLTHDLEGMVVAVPE 151
+LP E ++ SRL CQ+ +T L+G+VV +PE
Sbjct: 59 KLPKALPTETDMIDFAYEPNPAT--SRLTCQIKVTSLLDGLVVHLPE 103
>sp|Q8PWV6|SYFA_METMA Phenylalanine--tRNA ligase alpha subunit OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=pheS PE=3 SV=1
Length = 495
Score = 31.6 bits (70), Expect = 2.3, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 38 AKVADRIVHLFAIDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAECEVN 97
A V+++++ +++ +G++ GL + ++ AL N P S LEE+ +C + V
Sbjct: 56 ASVSEKVLERYSLTKEGEEYKKTGLPERQIIDALKN-----PVS--LEELRSCFSPQTVG 108
Query: 98 IAQEWL 103
IA WL
Sbjct: 109 IATGWL 114
>sp|Q1RJ69|FER2_RICBR 2Fe-2S ferredoxin OS=Rickettsia bellii (strain RML369-C) GN=fdxB
PE=3 SV=1
Length = 111
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 130 SRLGCQVVLTHDLEGMVVAVP 150
SRLGCQ++LT L+G+ V +P
Sbjct: 84 SRLGCQIILTEKLDGIKVRLP 104
>sp|Q5BL07|PEX1_MOUSE Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2
Length = 1284
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 40 VADRIVHLFAIDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDAC 90
V DR+V+ DG + GL G +L A + LIDPA R +D C
Sbjct: 957 VTDRVVNQLLTQLDG----VEGLQGVYVLAATSRPDLIDPALLRPGRLDKC 1003
>sp|Q6DFN5|RSPH9_XENTR Radial spoke head protein 9 homolog OS=Xenopus tropicalis GN=rsph9
PE=2 SV=1
Length = 277
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 1 MAISTLQKLSSQIHRLPSLSPLSKSLTHRSSATAAPSAKVADRIVH 46
+ +S +KLSS H PSL+P KSL + A PS D + H
Sbjct: 177 LEVSEGKKLSSYFHFTPSLNPKKKSLLEK--AALDPSIDFLDSLEH 220
>sp|O43933|PEX1_HUMAN Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1
Length = 1283
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 40 VADRIVHLFAIDPDGQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDAC 90
V DR+V+ DG + GL G +L A + LIDPA R +D C
Sbjct: 956 VTDRVVNQLLTQLDG----VEGLQGVYVLAATSRPDLIDPALLRPGRLDKC 1002
>sp|Q8EV77|LON_MYCPE Lon protease OS=Mycoplasma penetrans (strain HF-2) GN=lon PE=3 SV=1
Length = 781
Score = 29.6 bits (65), Expect = 8.9, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 54 GQKRPIIGLAGQTLLKALTNSGLIDPASHRLEEIDACSAECEVNIAQEWLDRLPPRS--- 110
G ++ IG ++KA++ +G+++P L+EID ++ + + A LD L P
Sbjct: 402 GHRKTYIGAMPGRIIKAMSKAGVVNPV-FLLDEIDKLGSDHKGDPASAMLDILDPEQNNR 460
Query: 111 YEEEYVLKRNSRARVL 126
+ + Y+ + + VL
Sbjct: 461 FSDNYIEEDYDLSNVL 476
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,590,908
Number of Sequences: 539616
Number of extensions: 2178300
Number of successful extensions: 5859
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 5827
Number of HSP's gapped (non-prelim): 38
length of query: 158
length of database: 191,569,459
effective HSP length: 108
effective length of query: 50
effective length of database: 133,290,931
effective search space: 6664546550
effective search space used: 6664546550
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)