Query 031533
Match_columns 158
No_of_seqs 119 out of 1174
Neff 8.0
Searched_HMMs 29240
Date Tue Mar 26 01:03:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031533.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031533hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 100.0 6.9E-30 2.4E-34 185.7 11.8 110 42-155 38-149 (151)
2 4eld_A MJ16.5-P1, small heat s 100.0 4E-29 1.4E-33 183.4 12.9 105 47-156 56-161 (161)
3 3gla_A Low molecular weight he 100.0 2.3E-28 7.9E-33 165.9 13.5 98 45-147 2-99 (100)
4 4fei_A Heat shock protein-rela 99.9 5E-27 1.7E-31 160.1 11.8 95 44-148 3-97 (102)
5 3aab_A Putative uncharacterize 99.9 2.9E-27 9.8E-32 166.3 10.8 112 24-148 5-118 (123)
6 3l1e_A Alpha-crystallin A chai 99.9 1.4E-25 4.7E-30 154.0 13.0 98 47-156 2-105 (106)
7 2wj5_A Heat shock protein beta 99.9 2.2E-25 7.7E-30 151.7 11.5 98 48-157 2-100 (101)
8 2klr_A Alpha-crystallin B chai 99.9 1.5E-23 5.2E-28 155.4 9.7 98 48-157 64-163 (175)
9 3q9p_A Heat shock protein beta 99.9 3.8E-23 1.3E-27 136.4 10.2 82 52-145 2-84 (85)
10 2y1y_A Alpha-crystallin B chai 99.9 7.3E-23 2.5E-27 136.4 10.5 86 54-151 3-89 (90)
11 2bol_A TSP36, small heat shock 99.9 2E-22 6.7E-27 161.5 13.5 97 45-155 96-197 (314)
12 2bol_A TSP36, small heat shock 99.8 2.9E-20 1E-24 148.9 8.5 89 48-145 221-313 (314)
13 1rl1_A Suppressor of G2 allele 99.1 2.1E-10 7.1E-15 78.7 8.6 83 46-148 8-90 (114)
14 2xcm_C SGT1-like protein, cyto 99.1 2.9E-10 1E-14 74.9 8.4 82 47-148 2-83 (92)
15 3eud_A Protein SHQ1; CS domain 98.6 9.8E-07 3.4E-11 60.1 12.1 82 43-149 13-99 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.6 1E-07 3.6E-12 66.9 7.5 79 46-149 2-85 (134)
17 3igf_A ALL4481 protein; two-do 98.4 6.6E-07 2.3E-11 73.1 8.7 72 47-145 297-369 (374)
18 1x5m_A Calcyclin-binding prote 98.2 5.4E-05 1.9E-09 52.5 12.0 82 47-148 20-105 (127)
19 1wh0_A Ubiquitin carboxyl-term 98.1 3.8E-05 1.3E-09 54.0 10.2 92 46-148 18-113 (134)
20 1wgv_A KIAA1068 protein; CS do 98.1 6.8E-05 2.3E-09 51.8 11.0 86 42-147 14-102 (124)
21 3qor_A Nuclear migration prote 97.9 0.00015 5E-09 50.0 10.5 83 42-147 11-97 (121)
22 1wfi_A Nuclear distribution ge 97.9 7.6E-05 2.6E-09 52.0 8.9 81 44-147 4-88 (131)
23 1ejf_A Progesterone receptor P 97.8 0.00019 6.6E-09 49.6 8.8 78 49-147 5-82 (125)
24 2o30_A Nuclear movement protei 97.8 0.0002 6.9E-09 49.9 9.0 77 47-147 4-81 (131)
25 2rh0_A NUDC domain-containing 97.6 0.0011 3.7E-08 47.7 11.1 78 46-147 12-91 (157)
26 2kmw_A Uncharacterized protein 97.6 0.0003 1E-08 50.2 8.1 78 47-147 4-82 (150)
27 2cg9_X CO-chaperone protein SB 97.4 4.6E-05 1.6E-09 53.5 1.8 84 47-146 6-97 (134)
28 3q9p_A Heat shock protein beta 84.7 2.3 8E-05 26.6 5.3 33 113-146 8-40 (85)
29 3gla_A Low molecular weight he 77.7 5.3 0.00018 25.4 5.3 34 112-146 14-47 (100)
30 2y1y_A Alpha-crystallin B chai 76.8 5.4 0.00018 25.1 5.0 32 113-145 7-38 (90)
31 3l1e_A Alpha-crystallin A chai 74.3 6.2 0.00021 25.7 4.9 33 112-145 12-44 (106)
32 3aab_A Putative uncharacterize 73.4 9.5 0.00032 25.3 5.8 35 112-147 34-69 (123)
33 2wj5_A Heat shock protein beta 73.2 7.3 0.00025 25.1 5.0 33 113-146 12-44 (101)
34 4eld_A MJ16.5-P1, small heat s 72.9 11 0.00038 26.3 6.3 32 114-146 68-99 (161)
35 4fei_A Heat shock protein-rela 72.2 8.7 0.0003 24.6 5.3 33 112-145 16-48 (102)
36 3qqz_A Putative uncharacterize 68.9 28 0.00096 26.2 8.2 69 59-141 13-86 (255)
37 1gme_A Heat shock protein 16.9 64.5 16 0.00056 25.2 5.7 33 114-147 55-88 (151)
38 2nwt_A UPF0165 protein AF_2212 61.1 15 0.00051 22.3 4.2 30 127-157 3-32 (69)
39 2cql_A OK/SW-CL.103, 60S ribos 58.8 17 0.00059 23.5 4.6 18 70-88 20-37 (100)
40 1rl6_A Protein (ribosomal prot 57.4 25 0.00086 25.2 5.7 45 70-144 11-55 (177)
41 2klr_A Alpha-crystallin B chai 57.3 17 0.00058 25.9 4.8 32 114-146 75-106 (175)
42 1nkw_E 50S ribosomal protein L 54.6 31 0.0011 25.6 5.9 46 70-145 39-84 (212)
43 3j21_F 50S ribosomal protein L 50.4 32 0.0011 24.9 5.3 44 70-142 14-57 (184)
44 2o30_A Nuclear movement protei 47.4 60 0.0021 21.6 6.8 33 111-143 13-45 (131)
45 1vq8_E 50S ribosomal protein L 46.0 44 0.0015 24.0 5.4 46 70-144 9-54 (178)
46 2gjh_A Designed protein; oblig 43.3 17 0.00058 20.6 2.2 23 69-92 31-53 (62)
47 3v2d_H 50S ribosomal protein L 38.5 75 0.0026 22.7 5.7 43 70-142 12-54 (180)
48 3iz5_F 60S ribosomal protein L 36.8 89 0.0031 22.5 5.9 18 70-88 13-30 (190)
49 1ew4_A CYAY protein; friedreic 36.2 22 0.00075 23.3 2.3 17 128-144 29-45 (106)
50 3u5e_H L8, RP24, YL11, 60S rib 34.9 1E+02 0.0035 22.3 5.9 18 70-88 13-30 (191)
51 3oeq_A Frataxin homolog, mitoc 31.5 35 0.0012 23.0 2.7 16 129-144 49-64 (123)
52 1n91_A ORF, hypothetical prote 31.4 83 0.0028 20.6 4.6 36 52-89 8-44 (108)
53 1qys_A TOP7; alpha-beta, novel 29.2 48 0.0016 20.6 2.9 23 68-91 74-96 (106)
54 4gzv_A Hypothetical protein; A 28.6 1.5E+02 0.005 20.5 5.8 72 47-142 35-108 (142)
55 2rh0_A NUDC domain-containing 28.4 1.5E+02 0.005 20.4 6.3 33 111-143 22-54 (157)
56 3bbo_I Ribosomal protein L6; l 27.6 34 0.0012 25.5 2.4 47 70-145 54-100 (223)
57 1q5l_A Chaperone protein DNAK; 27.3 1.1E+02 0.0039 20.3 4.9 29 128-156 99-130 (135)
58 2zkr_e 60S ribosomal protein L 26.0 91 0.0031 22.5 4.4 23 65-88 8-30 (192)
59 3r8s_G 50S ribosomal protein L 25.3 43 0.0015 23.9 2.4 43 70-142 11-53 (176)
60 1wgv_A KIAA1068 protein; CS do 24.3 1.5E+02 0.0052 19.3 5.8 33 111-143 28-61 (124)
61 3d33_A Domain of unknown funct 24.2 1.3E+02 0.0046 19.5 4.6 25 115-144 22-46 (108)
62 3t3l_A Frataxin, mitochondrial 23.3 50 0.0017 22.4 2.4 17 127-143 40-56 (129)
63 2ks0_A Uncharacterized protein 21.6 64 0.0022 19.5 2.4 23 68-91 18-40 (71)
64 3qor_A Nuclear migration prote 21.5 1.7E+02 0.006 18.9 5.6 35 110-144 24-60 (121)
65 3gbl_A BETA2-microglobulin; im 20.0 1.6E+02 0.0056 18.0 5.7 25 56-80 18-43 (97)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.96 E-value=6.9e-30 Score=185.65 Aligned_cols=110 Identities=45% Similarity=0.695 Sum_probs=98.1
Q ss_pred ccccCCCCeeEEEeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECC
Q 031533 42 AKAMAATPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLP 121 (158)
Q Consensus 42 ~~~~~~p~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP 121 (158)
....+.|+++|.|++++|+|.++|||+++++|+|++.+|+.|+|+|++.... ..++..|+++|+.+|.|.|+|.||
T Consensus 38 ~~~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~----~~~~~~~~~~Er~~g~F~R~~~LP 113 (151)
T 1gme_A 38 TAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEK----EDKNDKWHRVERSSGKFVRRFRLL 113 (151)
T ss_dssp HHHHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCC----CCTTCEEEECCCCCCCEEEEEECS
T ss_pred cccccCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEcccc----ccCCceEEEEeEeccEEEEEEECC
Confidence 3445679999999999999999999999999999996468999999988766 456789999999999999999999
Q ss_pred CCcccCCeEEEEeCcEEEEEEecCCCCCC--eeEEE
Q 031533 122 DNANVDKISALCQDGVLTVTVEKVPPPQP--KTIQV 155 (158)
Q Consensus 122 ~~vd~~~i~A~~~~GiL~I~lpK~~~~~~--~~i~I 155 (158)
.+||.++|+|.|+||+|+|++||.+..++ ++|+|
T Consensus 114 ~~vd~~~i~A~~~nGvL~I~lPK~~~~~~~~~~I~I 149 (151)
T 1gme_A 114 EDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQI 149 (151)
T ss_dssp SCCCGGGCEEEEETTEEEEEEECCCCCTTCCCCCCC
T ss_pred CCccccceEEEEECCEEEEEEEccCcCCCCCeEeee
Confidence 99999999999999999999999887665 55555
No 2
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.96 E-value=4e-29 Score=183.36 Aligned_cols=105 Identities=20% Similarity=0.295 Sum_probs=96.5
Q ss_pred CCCeeEEEeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEee-ecceEEEEEECCCCcc
Q 031533 47 ATPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMER-RFGKFMRKFVLPDNAN 125 (158)
Q Consensus 47 ~p~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~-~~~~f~r~~~LP~~vd 125 (158)
.+++||.|++++|+|.++|||+++++|+|+++ ++.|+|+|++.... ..+...++++|+ .+|.|.|+|.||.+||
T Consensus 56 ~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~-~~~L~I~g~~~~~~----~~~~~~~~~~Er~~~g~f~R~~~LP~~vd 130 (161)
T 4eld_A 56 FMPISIIEGDQHIKVIAWLPGVNKEDIILNAV-GDTLEIRAKRSPLM----ITESERIIYSEIPEEEEIYRTIKLPATVK 130 (161)
T ss_dssp CCCEEEEECSSEEEEEEECTTCCGGGEEEEEE-TTEEEEEEECCCCC----CCSSCEEEEECSCCCCEEEEEEECSSCBC
T ss_pred ccceeEEEeCCEEEEEEECCCCChHhEEEEEE-CCEEEEEEEEcccc----cCCCceEEEEEeeccccEEEEEECCCCcc
Confidence 34599999999999999999999999999999 58999999988765 445677999999 9999999999999999
Q ss_pred cCCeEEEEeCcEEEEEEecCCCCCCeeEEEe
Q 031533 126 VDKISALCQDGVLTVTVEKVPPPQPKTIQVQ 156 (158)
Q Consensus 126 ~~~i~A~~~~GiL~I~lpK~~~~~~~~i~I~ 156 (158)
.++|+|.|+||+|+|++||.+..++|+|+|+
T Consensus 131 ~~~i~A~~~nGvL~I~lpK~~~~~~r~I~Ie 161 (161)
T 4eld_A 131 EENASAKFENGVLSVILPKAESSIKKGINIE 161 (161)
T ss_dssp GGGCEEEEETTEEEEEEEBCGGGSCCCCCCC
T ss_pred cccEEEEEECCEEEEEEEcCCCCCCcEeecC
Confidence 9999999999999999999988888999885
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.96 E-value=2.3e-28 Score=165.93 Aligned_cols=98 Identities=38% Similarity=0.726 Sum_probs=90.3
Q ss_pred cCCCCeeEEEeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCc
Q 031533 45 MAATPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNA 124 (158)
Q Consensus 45 ~~~p~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~v 124 (158)
.|.|+++|.+++++|+|.++|||+++++|+|+++ ++.|+|+|++.... ..+...|+++|+.+|.|.|+|.||.+|
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~-~~~L~I~g~~~~~~----~~~~~~~~~~er~~g~f~r~~~LP~~v 76 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMD-KGILSIRGERKSES----STETERFSRIERRYGSFHRRFALPDSA 76 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEE-TTEEEEEEEECCGG----GSSGGGEEEECCCCEEEEEEEECCTTB
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEE-CCEEEEEEEEcCcC----ccCCccEEEEeecceEEEEEEECCCCc
Confidence 4789999999999999999999999999999999 58999999998766 456788999999999999999999999
Q ss_pred ccCCeEEEEeCcEEEEEEecCCC
Q 031533 125 NVDKISALCQDGVLTVTVEKVPP 147 (158)
Q Consensus 125 d~~~i~A~~~~GiL~I~lpK~~~ 147 (158)
|.++|+|.|+||+|+|++||.+.
T Consensus 77 d~~~i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 77 DADGITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CTTSCEEEEETTEEEEEEEBC--
T ss_pred ChHHeEEEEeCCEEEEEEecCCC
Confidence 99999999999999999999864
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.95 E-value=5e-27 Score=160.05 Aligned_cols=95 Identities=29% Similarity=0.440 Sum_probs=87.2
Q ss_pred ccCCCCeeEEEeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCC
Q 031533 44 AMAATPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDN 123 (158)
Q Consensus 44 ~~~~p~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~ 123 (158)
+.+.|+++|.|++++|+|.++|||+++++|+|+++ ++.|+|+|+++. ...|+++|+.+|.|.|+|.||.+
T Consensus 3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~-~~~L~I~g~~~~---------~~~~~~~er~~g~f~R~~~LP~~ 72 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAED-GGQLTVSGERPG---------TEHLLRSERPSGRFVRELAFPEP 72 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEE-TTEEEEEEEECC---------CSSCSSCCSEEEEEEEEEECSSC
T ss_pred CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEE-CCEEEEEEEEec---------CCCEEEEEEeccEEEEEEECCCC
Confidence 56789999999999999999999999999999999 589999999842 24677889999999999999999
Q ss_pred cccCCeEEEEeCcEEEEEEecCCCC
Q 031533 124 ANVDKISALCQDGVLTVTVEKVPPP 148 (158)
Q Consensus 124 vd~~~i~A~~~~GiL~I~lpK~~~~ 148 (158)
||.++|+|.|+||+|+|++||.++.
T Consensus 73 vd~~~i~A~~~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 73 VRPASGVASLAGGVLTVRFEKLRPT 97 (102)
T ss_dssp BCTTCCEEEEETTEEEEEEEBSSCC
T ss_pred cchhHcEEEEECCEEEEEEEccCcc
Confidence 9999999999999999999998764
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.95 E-value=2.9e-27 Score=166.31 Aligned_cols=112 Identities=24% Similarity=0.315 Sum_probs=90.2
Q ss_pred hHHHHhhcCCCCccccccccccCCCCeeEEEeCCeEEEEEEcCCCCCCCeEEEEecC-cEEEEEEEEecCCCCcCCCCCc
Q 031533 24 PEEQEKTRNNPSRAYVRDAKAMAATPADVMEYPNSYVFIVDMPGIKASEIKVQVESE-NVLVVSGERKRDPKEKDNKDGV 102 (158)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~~~-~~L~I~g~~~~~~~~~~~~~~~ 102 (158)
+++|.+.|.+..+.+. ..+.|+++|.+++++|+|.++|||+++++|+|++. + +.|+|+|++.... +.
T Consensus 5 ~~em~~~~~~~~~~~~----~~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~-~~~~L~I~g~~~~~~-------~~ 72 (123)
T 3aab_A 5 GKELQKRSEELSRGFY----ELVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVS-GQNELIIEAEREITE-------PG 72 (123)
T ss_dssp ---------CCCHHHH----HHHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEE-TTTEEEEEEECCCCC-------CS
T ss_pred HHHHHHHHHHHhhhcc----ccCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEe-CCCEEEEEEEEeccC-------CC
Confidence 4455566665555432 23459999999999999999999999999999999 5 8999999975432 46
Q ss_pred eEEEEeeecceEEEEEECCCCcccCCe-EEEEeCcEEEEEEecCCCC
Q 031533 103 KYVRMERRFGKFMRKFVLPDNANVDKI-SALCQDGVLTVTVEKVPPP 148 (158)
Q Consensus 103 ~~~~~e~~~~~f~r~~~LP~~vd~~~i-~A~~~~GiL~I~lpK~~~~ 148 (158)
.|+++|+.+ .|.|+|.||.+||.++| +|.|+||+|+|++||.+..
T Consensus 73 ~~~~~Er~~-~f~R~~~LP~~vd~~~i~~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 73 VKYLTQRPK-YVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp CEEEECSCS-EEEEEEECSSEECTTCCCEEEEETTEEEEEEEGGGEE
T ss_pred eEEEEEEeE-EEEEEEECCCCcCcchhCeeEEcCCEEEEEEEcCCCC
Confidence 889999999 99999999999999999 9999999999999998754
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.93 E-value=1.4e-25 Score=153.97 Aligned_cols=98 Identities=23% Similarity=0.478 Sum_probs=84.8
Q ss_pred CCCeeEEEeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCccc
Q 031533 47 ATPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANV 126 (158)
Q Consensus 47 ~p~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~ 126 (158)
+..++|.+++++|.|.++|||+++++|+|++. ++.|+|+|++.... +...|+++ +|.|+|.||.+||.
T Consensus 2 sg~~~i~e~~~~~~v~~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~------~~~~~~~~-----eF~R~~~LP~~vd~ 69 (106)
T 3l1e_A 2 SGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQ-EDFVEIHGKHNERQ------DDHGYISR-----EFHRRYRLPSNVDQ 69 (106)
T ss_dssp CCSEEEEECSSEEEEEEECTTSCGGGEEEEEE-TTEEEEEEEEEEEE------TTTEEEEE-----EEEEEEECCTTBCT
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEE-CCEEEEEEEEcccc------CCCCEEEE-----EEEEEEECCCCcCh
Confidence 45689999999999999999999999999999 58999999976543 23446544 39999999999999
Q ss_pred CCeEEEE-eCcEEEEEEecCCCC-----CCeeEEEe
Q 031533 127 DKISALC-QDGVLTVTVEKVPPP-----QPKTIQVQ 156 (158)
Q Consensus 127 ~~i~A~~-~~GiL~I~lpK~~~~-----~~~~i~I~ 156 (158)
++|+|.| +||+|+|++||.++. ++|+|+|+
T Consensus 70 ~~i~A~~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 70 SALSCSLSADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp TSCEEEECTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred hHcEEEECCCCEEEEEEEccCcccccCCCCeEeeec
Confidence 9999999 899999999998875 45888885
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.93 E-value=2.2e-25 Score=151.66 Aligned_cols=98 Identities=19% Similarity=0.353 Sum_probs=83.9
Q ss_pred CCeeEEEeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccC
Q 031533 48 TPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVD 127 (158)
Q Consensus 48 p~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~ 127 (158)
..+||.+++++|.|.++|||+++++|+|++. ++.|+|+|++.... ++..|++++ |.|+|.||.+||.+
T Consensus 2 ~~vdi~e~~~~~~v~~dlPG~~~edI~V~v~-~~~L~I~g~~~~~~------~~~~~~~~e-----F~R~~~LP~~vd~~ 69 (101)
T 2wj5_A 2 AMAQVPTDPGYFSVLLDVKHFSPEEISVKVV-GDHVEVHARHEERP------DEHGFIARE-----FHRRYRLPPGVDPA 69 (101)
T ss_dssp CCCCCCCCSSCEEEEEECTTSCGGGEEEEEE-TTEEEEEEEEEECS------STTCCEEEE-----EEEEEECCTTBCTT
T ss_pred CcEEEEEeCCEEEEEEECCCCcHHHeEEEEE-CCEEEEEEEEeccc------CCCCEEEEE-----EEEEEECCCCcChh
Confidence 3579999999999999999999999999999 58999999997644 234566554 99999999999999
Q ss_pred CeEEEE-eCcEEEEEEecCCCCCCeeEEEee
Q 031533 128 KISALC-QDGVLTVTVEKVPPPQPKTIQVQV 157 (158)
Q Consensus 128 ~i~A~~-~~GiL~I~lpK~~~~~~~~i~I~~ 157 (158)
+|+|.| +||+|+|++||.+..++++++|.+
T Consensus 70 ~i~A~~s~nGvL~I~lPK~~~~~~~~~~i~~ 100 (101)
T 2wj5_A 70 AVTSALSPEGVLSIQATPASAQASLPSPPAA 100 (101)
T ss_dssp CCEEEECTTSEEEEEECBCCCCCSSCC----
T ss_pred HCEEEECCCCEEEEEEECCCcCCCCCCcccc
Confidence 999999 899999999999988888888754
No 8
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.90 E-value=1.5e-23 Score=155.43 Aligned_cols=98 Identities=24% Similarity=0.395 Sum_probs=72.9
Q ss_pred CCeeEEEeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccC
Q 031533 48 TPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVD 127 (158)
Q Consensus 48 p~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~ 127 (158)
..++|.+++++|.|.++|||+++++|+|++. ++.|+|+|+++... ++..|++++ |.|+|.||.+||.+
T Consensus 64 ~~~dv~e~~d~~~v~~dlPG~~~edI~V~v~-~~~L~I~g~~~~~~------~~~~~~~re-----F~R~~~LP~~Vd~~ 131 (175)
T 2klr_A 64 GLSEMRLEKDRFSVNLDVKHFSPEELKVKVL-GDVIEVHGKHEERQ------DEHGFISRE-----FHRKYRIPADVDPL 131 (175)
T ss_dssp -----CCCCSEEEEEECCSSCCGGGEEEEEE-TTEEEEEEEEEEEE------ETTEEEEEE-----EEEEEECTTTCCTT
T ss_pred CceEEEEcCCeEEEEEECCCCChHHEEEEEE-CCEEEEEEEEcccc------cCCceEEEE-----EEEEEECCCCcChh
Confidence 3579999999999999999999999999999 48999999986543 234566554 99999999999999
Q ss_pred CeEEEE-eCcEEEEEEecCCCCCC-eeEEEee
Q 031533 128 KISALC-QDGVLTVTVEKVPPPQP-KTIQVQV 157 (158)
Q Consensus 128 ~i~A~~-~~GiL~I~lpK~~~~~~-~~i~I~~ 157 (158)
+|+|.| +||+|+|++||.+..++ |+|+|+.
T Consensus 132 ~i~A~~s~dGvL~I~lPK~~~~~~~r~I~I~~ 163 (175)
T 2klr_A 132 TITSSLSSDGVLTVNGPRKQVSGPERTIPITR 163 (175)
T ss_dssp TCEEEECTTSCEEEEEECC-------------
T ss_pred HeEEEEcCCCEEEEEEECCCCCCCCeEEEEec
Confidence 999999 89999999999876554 8999875
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.89 E-value=3.8e-23 Score=136.45 Aligned_cols=82 Identities=20% Similarity=0.342 Sum_probs=68.7
Q ss_pred EEEeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeEE
Q 031533 52 VMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVDKISA 131 (158)
Q Consensus 52 i~e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A 131 (158)
+.|++++|.|.++|||+++++|+|++.+ +.|+|+|++.... . + ..+ ..|+|.|+|.||.+||.++|+|
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~----~-~-~~~-----~~~~F~R~~~LP~~vd~~~i~A 69 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAARQ----D-E-HGY-----ISRCFTRKYTLPPGVDPTQVSS 69 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC-------------C-----CCEEEEEEEECCTTCCGGGCEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcccc----C-C-CCE-----EEEEEEEEEECCCCcChHHcEE
Confidence 3578999999999999999999999994 8999999987654 1 1 122 3678999999999999999999
Q ss_pred EEe-CcEEEEEEecC
Q 031533 132 LCQ-DGVLTVTVEKV 145 (158)
Q Consensus 132 ~~~-~GiL~I~lpK~ 145 (158)
.|+ ||+|+|++||.
T Consensus 70 ~~~~~GvL~I~lPK~ 84 (85)
T 3q9p_A 70 SLSPEGTLTVEAPMP 84 (85)
T ss_dssp EECTTSEEEEEEECC
T ss_pred EECCCCEEEEEEEcC
Confidence 997 99999999995
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.89 E-value=7.3e-23 Score=136.40 Aligned_cols=86 Identities=26% Similarity=0.419 Sum_probs=68.8
Q ss_pred EeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeEEEE
Q 031533 54 EYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVDKISALC 133 (158)
Q Consensus 54 e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~ 133 (158)
+++++|+|.++|||+++++|+|++. ++.|+|+|++.... ++..|++++ |.|+|.||.+||.++|+|.|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~------~~~~~~~~e-----f~R~~~LP~~vd~~~i~A~~ 70 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVL-GDVIEVHGKHEERQ------DEHGFISRE-----FHRKYRIPADVDPLTITSSM 70 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEE-TTEEEEEEEEEEEE------CSSSEEEEE-----EEEEEECCTTBCGGGCEEEE
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEE-CCEEEEEEEEeccc------CCCCEEEEE-----EEEEEECCCCcChhHcEEEE
Confidence 5789999999999999999999999 58999999986543 334566543 99999999999999999999
Q ss_pred -eCcEEEEEEecCCCCCCe
Q 031533 134 -QDGVLTVTVEKVPPPQPK 151 (158)
Q Consensus 134 -~~GiL~I~lpK~~~~~~~ 151 (158)
+||+|+|++||.+..+++
T Consensus 71 ~~~GvL~I~~pK~~~~~p~ 89 (90)
T 2y1y_A 71 SSDGVLTVNGPRKQVSGPE 89 (90)
T ss_dssp CTTSEEEEEECBC------
T ss_pred CCCCEEEEEEEcCCCCCCC
Confidence 899999999998876654
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.89 E-value=2e-22 Score=161.49 Aligned_cols=97 Identities=22% Similarity=0.278 Sum_probs=84.4
Q ss_pred cCCCCeeEEEeCC----eEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEEC
Q 031533 45 MAATPADVMEYPN----SYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVL 120 (158)
Q Consensus 45 ~~~p~~~i~e~~d----~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~L 120 (158)
.+.|++||+|+++ +|.|.++|||+++++|+|+++ ++.|+|+|+++... +++ +.+|+|.|+|.|
T Consensus 96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~-~~~L~I~ge~~~~~------e~~------r~~g~F~R~~~L 162 (314)
T 2bol_A 96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKAD-KNKLVVRAQKSVAC------GDA------AMSESVGRSIPL 162 (314)
T ss_dssp TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEE-TTEEEEEECCBSST------TCC------CBCCCEEEEEEC
T ss_pred cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEE-CCEEEEEEEEeccC------CCC------EEEEEEEEEEEC
Confidence 4678999999999 999999999999999999999 48999999987443 111 668999999999
Q ss_pred CCCcccCCeEEEEe-CcEEEEEEecCCCCCCeeEEE
Q 031533 121 PDNANVDKISALCQ-DGVLTVTVEKVPPPQPKTIQV 155 (158)
Q Consensus 121 P~~vd~~~i~A~~~-~GiL~I~lpK~~~~~~~~i~I 155 (158)
|.+||.++|+|.|+ ||+|+|++||.++.. +.|+|
T Consensus 163 P~~Vd~e~i~A~~~~nGVL~I~lPK~~~~~-~~I~i 197 (314)
T 2bol_A 163 PPSVDRNHIQATITTDDVLVIEAPVNEPNY-KAIKL 197 (314)
T ss_dssp CTTBCGGGCEEEECSSSEEEEEEEBSSCCT-TTEEE
T ss_pred CCCccccccEEEEeCCCEEEEEEeccCccc-ceeec
Confidence 99999999999999 999999999987653 44554
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.81 E-value=2.9e-20 Score=148.88 Aligned_cols=89 Identities=17% Similarity=0.274 Sum_probs=70.5
Q ss_pred CCeeEEEeC---CeEEEEEEc-CCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCC
Q 031533 48 TPADVMEYP---NSYVFIVDM-PGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDN 123 (158)
Q Consensus 48 p~~~i~e~~---d~y~i~~~l-PG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~ 123 (158)
..++|.+++ +.|.|.++| ||+++++|+|+++ ++.|+|+|+++... ..++++|+.+|+|.|+|.||++
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~-~~~LtI~ge~~~~~--------~~~~~~Er~~g~F~R~~~LP~~ 291 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAK-GNKVYVHGVTGKEE--------KTENASHSEHREFYKAFVTPEV 291 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEES-SSEEEEEEEEC--------------------CEEEEEEEECSSE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEE-CCEEEEEEEEeccC--------CceEEEEEeeeEEEEEEECCCC
Confidence 446777655 489999999 9999999999999 58999999987655 1468889999999999999999
Q ss_pred cccCCeEEEEeCcEEEEEEecC
Q 031533 124 ANVDKISALCQDGVLTVTVEKV 145 (158)
Q Consensus 124 vd~~~i~A~~~~GiL~I~lpK~ 145 (158)
||.++|+|.|+||||+|++||.
T Consensus 292 vd~~~i~A~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 292 VDASKTQAEIVDGLMVVEAPLF 313 (314)
T ss_dssp ECGGGCEEEEETTEEEEEEEEE
T ss_pred cChHHeEEEEeCCEEEEEEecC
Confidence 9999999999999999999985
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.14 E-value=2.1e-10 Score=78.74 Aligned_cols=83 Identities=8% Similarity=0.060 Sum_probs=72.1
Q ss_pred CCCCeeEEEeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcc
Q 031533 46 AATPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNAN 125 (158)
Q Consensus 46 ~~p~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd 125 (158)
..|.+++.++.+.+.|.+++||+.+++++|.+.+ +.|.|++... . ...|...+.|+..|+
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~--~-----------------~~~y~~~~~L~~~I~ 67 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLP--S-----------------GEDYNLKLELLHPII 67 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECT--T-----------------SSEEEEEECBSSCCC
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeC--C-----------------CcEEEEEeeCCCcCC
Confidence 4578999999999999999999999999999994 7999997632 1 123778899999999
Q ss_pred cCCeEEEEeCcEEEEEEecCCCC
Q 031533 126 VDKISALCQDGVLTVTVEKVPPP 148 (158)
Q Consensus 126 ~~~i~A~~~~GiL~I~lpK~~~~ 148 (158)
++..++.+.+|.|.|+|+|.++.
T Consensus 68 ~e~s~~~~~~~~l~i~L~K~~~~ 90 (114)
T 1rl1_A 68 PEQSTFKVLSTKIEIKLKKPEAV 90 (114)
T ss_dssp GGGEEEEECSSSEEEEEECSSCC
T ss_pred ccccEEEEECCEEEEEEEcCCCC
Confidence 99999999999999999998653
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.12 E-value=2.9e-10 Score=74.90 Aligned_cols=82 Identities=16% Similarity=0.096 Sum_probs=71.2
Q ss_pred CCCeeEEEeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCccc
Q 031533 47 ATPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANV 126 (158)
Q Consensus 47 ~p~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~ 126 (158)
.|.+++.++.+.+.|.+.+||+.++++.|.+. .+.|.|++... . ...|...+.|+..|++
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~-~~~l~v~~~~~--~-----------------~~~y~~~~~L~~~I~~ 61 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFG-EQILSVVIEVP--G-----------------EDAYYLQPRLFGKIIP 61 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEEC-SSBEEEEECCT--T-----------------SCCEEECCBBSSCBCG
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEE-CCEEEEEEEcC--C-----------------CcEEEEeeEcCCccCc
Confidence 47899999999999999999999999999999 47999997531 1 1237788899999999
Q ss_pred CCeEEEEeCcEEEEEEecCCCC
Q 031533 127 DKISALCQDGVLTVTVEKVPPP 148 (158)
Q Consensus 127 ~~i~A~~~~GiL~I~lpK~~~~ 148 (158)
+..++.+.+|.|.|+|+|.++.
T Consensus 62 ~~s~~~~~~~~l~i~L~K~~~~ 83 (92)
T 2xcm_C 62 DKCKYEVLSTKIEICLAKADII 83 (92)
T ss_dssp GGCEEEECSSCEEEEEEBSSSC
T ss_pred hhEEEEEECCEEEEEEEcCCCC
Confidence 9999999999999999998754
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.63 E-value=9.8e-07 Score=60.12 Aligned_cols=82 Identities=13% Similarity=0.282 Sum_probs=69.3
Q ss_pred cccCCCCeeEEEeCCeEEEEEEcCCCC--CCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEEC
Q 031533 43 KAMAATPADVMEYPNSYVFIVDMPGIK--ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVL 120 (158)
Q Consensus 43 ~~~~~p~~~i~e~~d~y~i~~~lPG~~--~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~L 120 (158)
..+..|...|.++++..+|.+.+|-+. ..++++.++ |+.+.... ..|..++.|
T Consensus 13 ~~~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd-~~~F~F~~------------------------~PYyLRL~l 67 (115)
T 3eud_A 13 DKMITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQ-ENMIIFHL------------------------SPYYLRLRF 67 (115)
T ss_dssp -CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEE-TTEEEEEE------------------------TTEEEEEEC
T ss_pred CCEeCCcEEEEECCCEEEEEEEcCceecccCccEEEEe-CCEEEEec------------------------CCeEEEEec
Confidence 345689999999999999999999977 789999999 68888873 337789999
Q ss_pred CCCc-ccCCeEEEE--eCcEEEEEEecCCCCC
Q 031533 121 PDNA-NVDKISALC--QDGVLTVTVEKVPPPQ 149 (158)
Q Consensus 121 P~~v-d~~~i~A~~--~~GiL~I~lpK~~~~~ 149 (158)
|..+ +.+.-+|.| ++|.++|++||..+.+
T Consensus 68 P~~vved~~~~A~YD~d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 68 PHELIDDERSTAQYDSKDECINVKVAKLNKNE 99 (115)
T ss_dssp SSCEECSTTCEEEEETTTTEEEEEEEESSTTC
T ss_pred CcceecCCCcceEEeCCCcEEEEEEcCCcCCC
Confidence 9997 767789999 4999999999987654
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.63 E-value=1e-07 Score=66.92 Aligned_cols=79 Identities=13% Similarity=0.301 Sum_probs=68.2
Q ss_pred CCCCeeEEEeCCeEEEEEEcCCCC--CCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCC
Q 031533 46 AATPADVMEYPNSYVFIVDMPGIK--ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDN 123 (158)
Q Consensus 46 ~~p~~~i~e~~d~y~i~~~lPG~~--~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~ 123 (158)
..|...+.++++..+|.+.+|.+. ..++++.+. |..+... ...|...+.||..
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~-~~~F~F~------------------------~~PYyLRL~LP~~ 56 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQ-ENMIIFH------------------------LSPYYLRLRFPHE 56 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEEC-SSSEEEC------------------------SSSSCEEECCSSC
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEe-CCEEEEe------------------------cCCeEEEecCCCe
Confidence 468899999999999999999999 899999999 5777777 2337788999999
Q ss_pred c-ccCCeEEEE--eCcEEEEEEecCCCCC
Q 031533 124 A-NVDKISALC--QDGVLTVTVEKVPPPQ 149 (158)
Q Consensus 124 v-d~~~i~A~~--~~GiL~I~lpK~~~~~ 149 (158)
| |.+..+|.| +.|.|+|++||..+.+
T Consensus 57 V~e~~~~kA~YD~d~~~~~VtLpK~~~Ge 85 (134)
T 2k8q_A 57 LIDDERSTAQYDSKDECINVKVAKLNKNE 85 (134)
T ss_dssp EECCSSCEEEEETTTTEEEEEEEESSTTC
T ss_pred eecCCCcceeEeccCCEEEEEEeCCCCCC
Confidence 8 888899999 4899999999986543
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.44 E-value=6.6e-07 Score=73.09 Aligned_cols=72 Identities=18% Similarity=0.229 Sum_probs=62.7
Q ss_pred CCCeeEEEeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCccc
Q 031533 47 ATPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANV 126 (158)
Q Consensus 47 ~p~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~ 126 (158)
.+++.|... .|.+++.|||+++++|++.-. |..|+|+ .|.|+|.+.||.....
T Consensus 297 ~~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~-gdeL~v~------------------------~g~~rR~i~LP~~L~~ 349 (374)
T 3igf_A 297 PKPITIDTH--NRQVRLFLPGFDKKQVKLTQY-GPEVTVE------------------------AGDQRRNIFLPPALSG 349 (374)
T ss_dssp CCSEEEETT--TTEEEEECTTCCGGGCEEEEE-TTEEEEE------------------------ETTEEEEEECCTTTTT
T ss_pred CCCEEEEec--cEEEEEECCCCCHHHeEEEEE-CCeEEEE------------------------ECCEeecccCCHHHcC
Confidence 346666544 899999999999999999999 7999999 6779999999999877
Q ss_pred CCe-EEEEeCcEEEEEEecC
Q 031533 127 DKI-SALCQDGVLTVTVEKV 145 (158)
Q Consensus 127 ~~i-~A~~~~GiL~I~lpK~ 145 (158)
..+ .|.|+||.|+|++-..
T Consensus 350 ~~v~~A~~~~~~L~i~~~~~ 369 (374)
T 3igf_A 350 RPITGAKFQNNYLIISFLEH 369 (374)
T ss_dssp CCEEEEEEETTEEEEEECCC
T ss_pred CCccccEEECCEEEEEEehh
Confidence 776 7999999999998654
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.16 E-value=5.4e-05 Score=52.54 Aligned_cols=82 Identities=10% Similarity=0.083 Sum_probs=68.1
Q ss_pred CCCeeEEEeCCeEEEEEEcCCC---CCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEE-CCC
Q 031533 47 ATPADVMEYPNSYVFIVDMPGI---KASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFV-LPD 122 (158)
Q Consensus 47 ~p~~~i~e~~d~y~i~~~lPG~---~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~-LP~ 122 (158)
.+.+++.++.+...|.|.+||+ .++++.|.+. .+.|.|.+... . + ..|.-.+. |-.
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~-~~~l~v~~~~~--~-------~----------~~y~~~~~~L~~ 79 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFT-ERSFDLLVKNL--N-------G----------KSYSMIVNNLLK 79 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEEC-SSEEEEEECSC--S-------S----------SCEEEEEECBSS
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEE-cCEEEEEEEcC--C-------C----------CcEEEEhHHhcC
Confidence 4579999999999999999999 8999999999 48999986311 1 1 12666775 999
Q ss_pred CcccCCeEEEEeCcEEEEEEecCCCC
Q 031533 123 NANVDKISALCQDGVLTVTVEKVPPP 148 (158)
Q Consensus 123 ~vd~~~i~A~~~~GiL~I~lpK~~~~ 148 (158)
.|+++.-+.....+.+.|+|.|.+..
T Consensus 80 ~I~~e~S~~~v~~~kVei~L~K~~~~ 105 (127)
T 1x5m_A 80 PISVEGSSKKVKTDTVLILCRKKVEN 105 (127)
T ss_dssp CCCTTTCEEEEETTEEEEEEECSSSS
T ss_pred ccCcccCEEEEeCCEEEEEEEECCCC
Confidence 99999988888999999999998753
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.09 E-value=3.8e-05 Score=53.99 Aligned_cols=92 Identities=15% Similarity=0.176 Sum_probs=70.0
Q ss_pred CCCCeeEEEe-CCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecc---eEEEEEECC
Q 031533 46 AATPADVMEY-PNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFG---KFMRKFVLP 121 (158)
Q Consensus 46 ~~p~~~i~e~-~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~---~f~r~~~LP 121 (158)
..+.+++.++ .+...|.|.++++.++++.|.+.+ +.|.|+...... . ........| .|.-.+.|-
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~~---------~-~l~~~~a~g~~~~y~~~~~L~ 86 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRDG---------N-FLRLHPGCGPHTTFRWQVKLR 86 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCCH---------H-HHHHSTTCCTTSCEEEEEEBS
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCCC---------c-ccccccccCcceeEEEecccc
Confidence 3678999999 999999999999999999999994 899998643210 0 000000001 366778899
Q ss_pred CCcccCCeEEEEeCcEEEEEEecCCCC
Q 031533 122 DNANVDKISALCQDGVLTVTVEKVPPP 148 (158)
Q Consensus 122 ~~vd~~~i~A~~~~GiL~I~lpK~~~~ 148 (158)
..|+++.-+..+..+.+.|+|.|.+..
T Consensus 87 ~~I~pe~S~~~v~~~kIeI~L~K~e~~ 113 (134)
T 1wh0_A 87 NLIEPEQCTFCFTASRIDICLRKRQSQ 113 (134)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEESSSC
T ss_pred ccCCchhCEEEEeCCEEEEEEEECCCC
Confidence 999999888888899999999998653
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=98.07 E-value=6.8e-05 Score=51.82 Aligned_cols=86 Identities=14% Similarity=0.120 Sum_probs=68.2
Q ss_pred ccccCCCCeeEEEeCCeEEEEEEcC-CC-CCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEE
Q 031533 42 AKAMAATPADVMEYPNSYVFIVDMP-GI-KASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFV 119 (158)
Q Consensus 42 ~~~~~~p~~~i~e~~d~y~i~~~lP-G~-~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~ 119 (158)
..+...|.+.+.++.+...|.|.|| |+ +.+++.|.+. .+.|.|.+... . +.. +.-...
T Consensus 14 ~nG~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~-~~~l~v~~~~~--~-------~~~----------~~~~~~ 73 (124)
T 1wgv_A 14 YNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALS-SSSIRVAMLEE--N-------GER----------VLMEGK 73 (124)
T ss_dssp SSSBCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEEC-SSEEEEEEECS--S-------SEE----------EEEEEE
T ss_pred cCCCcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEE-cCEEEEEEEcc--C-------CCc----------eEEccc
Confidence 3444578999999999999999998 87 8999999999 48999986421 1 111 224567
Q ss_pred CCCCcccCCeEEEEeCcE-EEEEEecCCC
Q 031533 120 LPDNANVDKISALCQDGV-LTVTVEKVPP 147 (158)
Q Consensus 120 LP~~vd~~~i~A~~~~Gi-L~I~lpK~~~ 147 (158)
|...|+++.-+..++++- |.|+|.|...
T Consensus 74 L~~~I~~e~S~w~i~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 74 LTHKINTESSLWSLEPGKCVLVNLSKVGE 102 (124)
T ss_dssp BSSCBCTTTCEEEECTTSEEEEEECBSSS
T ss_pred ccCcCCCcCCEEEEeCCCEEEEEEEECCC
Confidence 999999999888898775 9999999754
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.93 E-value=0.00015 Score=49.99 Aligned_cols=83 Identities=20% Similarity=0.207 Sum_probs=66.7
Q ss_pred ccccCCCCeeEEEeCCeEEEEEEcCC---CCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEE
Q 031533 42 AKAMAATPADVMEYPNSYVFIVDMPG---IKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKF 118 (158)
Q Consensus 42 ~~~~~~p~~~i~e~~d~y~i~~~lPG---~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~ 118 (158)
..+...|.+.+.++.+...|.|.||. ++.+++.|.+. .+.|.|..+- .. +.-..
T Consensus 11 ~nG~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~-~~~l~v~~kg--~~--------------------~~~~g 67 (121)
T 3qor_A 11 GNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQ-RRHLRVGLKG--QP--------------------AIIDG 67 (121)
T ss_dssp TSSCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEE-TTEEEEEETT--SC--------------------CSEEE
T ss_pred CCCCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEE-cCEEEEEEcC--cc--------------------eEEec
Confidence 34455788999999999999999984 78999999999 4889887421 01 12355
Q ss_pred ECCCCcccCCeEEEEeCc-EEEEEEecCCC
Q 031533 119 VLPDNANVDKISALCQDG-VLTVTVEKVPP 147 (158)
Q Consensus 119 ~LP~~vd~~~i~A~~~~G-iL~I~lpK~~~ 147 (158)
.|...|+++.-...+++| .|.|+|.|...
T Consensus 68 ~L~~~I~~deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 68 ELYNEVKVEESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp EBSSCBCGGGCEEEEETTTEEEEEEEBSSS
T ss_pred cccccccccccEEEEcCCCEEEEEEEECCC
Confidence 789999999988899987 99999999864
No 22
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.91 E-value=7.6e-05 Score=52.04 Aligned_cols=81 Identities=21% Similarity=0.238 Sum_probs=65.7
Q ss_pred ccCCCCeeEEEeCCeEEEEEEcC-C--CCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEEC
Q 031533 44 AMAATPADVMEYPNSYVFIVDMP-G--IKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVL 120 (158)
Q Consensus 44 ~~~~p~~~i~e~~d~y~i~~~lP-G--~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~L 120 (158)
+...|.+.+.++.+...|.|.|| | ++++++.|.+. .+.|.|..+- .. +.-...|
T Consensus 4 g~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~-~~~l~v~~kg--~~--------------------~~~~~~L 60 (131)
T 1wfi_A 4 GSSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQ-RRHLRVGLKG--QP--------------------PVVDGEL 60 (131)
T ss_dssp SSSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEE-TTEEEEEETT--SC--------------------CSBCSCB
T ss_pred CCCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEe-CCEEEEEECC--ce--------------------EEEeccc
Confidence 44568899999999999999999 6 89999999999 5899998520 00 1124468
Q ss_pred CCCcccCCeEEEEeCc-EEEEEEecCCC
Q 031533 121 PDNANVDKISALCQDG-VLTVTVEKVPP 147 (158)
Q Consensus 121 P~~vd~~~i~A~~~~G-iL~I~lpK~~~ 147 (158)
...|+++.-+..+++| .|.|+|.|...
T Consensus 61 ~~~I~~e~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 61 YNEVKVEESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp SSCBCSTTCEEEEETTTEEEEEEEBSSS
T ss_pred ccccccccCEEEEcCCCEEEEEEEECCC
Confidence 8899999988889888 89999999864
No 23
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.76 E-value=0.00019 Score=49.61 Aligned_cols=78 Identities=13% Similarity=0.056 Sum_probs=64.7
Q ss_pred CeeEEEeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCC
Q 031533 49 PADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVDK 128 (158)
Q Consensus 49 ~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~ 128 (158)
.+++.++.+...|+|.+|++ +++.|.+. .+.|.+++...... ..|.-.+.|-..|+++.
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~-~~~l~~~~~~~~~~------------------~~y~~~l~L~~~I~~e~ 63 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFE-KSKLTFSCLGGSDN------------------FKHLNEIDLFHCIDPND 63 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEE-TTEEEEEEEETTTT------------------EEEEEEEEBSSCEEEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEE-CCEEEEEEEeCCCC------------------ceEEEEEEccceecccc
Confidence 79999999999999999996 69999999 48999987631111 12667789999999999
Q ss_pred eEEEEeCcEEEEEEecCCC
Q 031533 129 ISALCQDGVLTVTVEKVPP 147 (158)
Q Consensus 129 i~A~~~~GiL~I~lpK~~~ 147 (158)
.+....+..+.|+|.|.++
T Consensus 64 S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 64 SKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp EEEEECSSCEEEEEEESST
T ss_pred CEEEECCCEEEEEEEECCC
Confidence 8888888889999999864
No 24
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.76 E-value=0.0002 Score=49.89 Aligned_cols=77 Identities=14% Similarity=0.078 Sum_probs=61.8
Q ss_pred CCCeeEEEeCCeEEEEEEcC-CCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcc
Q 031533 47 ATPADVMEYPNSYVFIVDMP-GIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNAN 125 (158)
Q Consensus 47 ~p~~~i~e~~d~y~i~~~lP-G~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd 125 (158)
.|.+.+.++.+...|.|.|| |++++++.|.+. .+.|.|.++ . .. .-...|...|+
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~-~~~l~v~~~----g--------~~-----------~~~~~L~~~I~ 59 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMV-GKKICVKNQ----G--------EI-----------VIDGELLHEVD 59 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEE-TTEEEEEET----T--------EE-----------EEEEEBSSCEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEE-CCEEEEEEC----C--------Ee-----------eEccccccccc
Confidence 47899999999999999996 889999999999 589999852 1 11 13467899999
Q ss_pred cCCeEEEEeCcEEEEEEecCCC
Q 031533 126 VDKISALCQDGVLTVTVEKVPP 147 (158)
Q Consensus 126 ~~~i~A~~~~GiL~I~lpK~~~ 147 (158)
++.-+..+.++-|.|+|.|...
T Consensus 60 ~e~S~w~i~~~kv~i~L~K~~~ 81 (131)
T 2o30_A 60 VSSLWWVINGDVVDVNVTKKRN 81 (131)
T ss_dssp EEEEEEEEETTEEEEEEEESSC
T ss_pred cccCEEEEeCCEEEEEEEECCC
Confidence 9988888888999999999743
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.60 E-value=0.0011 Score=47.66 Aligned_cols=78 Identities=14% Similarity=0.131 Sum_probs=64.8
Q ss_pred CCCCeeEEEeCCeEEEEEEcC-CCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCc
Q 031533 46 AATPADVMEYPNSYVFIVDMP-GIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNA 124 (158)
Q Consensus 46 ~~p~~~i~e~~d~y~i~~~lP-G~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~v 124 (158)
..|.+.+.++.+...|.|.|| |++.++|.|.+. .+.|.|.++ . .. + -...|...|
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~-~~~L~v~~k----g--------~~----------~-l~g~L~~~I 67 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQ-SRHVALAVG----G--------RE----------I-LKGKLFDST 67 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEEC-SSEEEEEET----T--------EE----------E-EEEEBSSCB
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEe-cCEEEEEEC----C--------EE----------E-Eeecccccc
Confidence 358899999999999999998 889999999999 489999852 1 00 2 356799999
Q ss_pred ccCCeEEEEeCcE-EEEEEecCCC
Q 031533 125 NVDKISALCQDGV-LTVTVEKVPP 147 (158)
Q Consensus 125 d~~~i~A~~~~Gi-L~I~lpK~~~ 147 (158)
+++.-+..++++- |.|+|-|...
T Consensus 68 ~~eeS~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 68 IADEGTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp CGGGCEEEEECCCEEEEEEEBSSC
T ss_pred CccccEEEEcCCcEEEEEEEEcCC
Confidence 9999888898775 9999999875
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.60 E-value=0.0003 Score=50.25 Aligned_cols=78 Identities=13% Similarity=0.139 Sum_probs=63.7
Q ss_pred CCCeeEEEeCCeEEEEEEcCCCCCCCeEEEEe-cCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcc
Q 031533 47 ATPADVMEYPNSYVFIVDMPGIKASEIKVQVE-SENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNAN 125 (158)
Q Consensus 47 ~p~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~-~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd 125 (158)
.|.+.+.++.+...|+|.+|++ ++++|.+. + +.|.+++. ... + ..|.-.+.|=..|+
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~--~~~-------~----------~~y~~~l~L~~~Id 61 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL--GAQ-------G----------ERFEFSLELYGKIM 61 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE--TTT-------T----------EEEEEEEEBSSCEE
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE--cCC-------C----------ceEEEEeEhhhccc
Confidence 4889999999999999999997 47888887 5 78999986 111 1 12667788999999
Q ss_pred cCCeEEEEeCcEEEEEEecCCC
Q 031533 126 VDKISALCQDGVLTVTVEKVPP 147 (158)
Q Consensus 126 ~~~i~A~~~~GiL~I~lpK~~~ 147 (158)
++ -+.......+.|+|.|.++
T Consensus 62 pe-S~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 62 TE-YRKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EE-EEEEEESSSEEEEEEECCS
T ss_pred cc-ceEEecCCEEEEEEEECCC
Confidence 99 7778888889999999764
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.43 E-value=4.6e-05 Score=53.52 Aligned_cols=84 Identities=8% Similarity=0.085 Sum_probs=58.9
Q ss_pred CCCeeEEEeCCe-------EEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEE
Q 031533 47 ATPADVMEYPNS-------YVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFV 119 (158)
Q Consensus 47 ~p~~~i~e~~d~-------y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~ 119 (158)
.|.+.+.++.+. ..|+|.+|++. ++.|.+. .+.|.+++...... .... ...|.-.+.
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~-~~~l~~~~~~~~~~-----g~~~--------~~~y~~~l~ 69 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIK-PSYIELKAQSKPHV-----GDEN--------VHHYQLHID 69 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBC-SSEEEECCEEC--------------------CEEBCEEEE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEE-CCEEEEEEeccccc-----CCcc--------CceEEEEEE
Confidence 477888888776 99999999974 8888888 48999987542210 0000 012567789
Q ss_pred CCCCcccCCeEEEEeCcE-EEEEEecCC
Q 031533 120 LPDNANVDKISALCQDGV-LTVTVEKVP 146 (158)
Q Consensus 120 LP~~vd~~~i~A~~~~Gi-L~I~lpK~~ 146 (158)
|...|+++..+..+.++. |.|+|.|.+
T Consensus 70 L~~~Idpe~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 70 LYKEIIPEKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp CSSCCCSSSEEEEECCC--CEEEEEECS
T ss_pred ChhhccccccEEEECCCEEEEEEEEECC
Confidence 999999999999998888 999999987
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=84.68 E-value=2.3 Score=26.56 Aligned_cols=33 Identities=15% Similarity=0.301 Sum_probs=28.9
Q ss_pred eEEEEEECCCCcccCCeEEEEeCcEEEEEEecCC
Q 031533 113 KFMRKFVLPDNANVDKISALCQDGVLTVTVEKVP 146 (158)
Q Consensus 113 ~f~r~~~LP~~vd~~~i~A~~~~GiL~I~lpK~~ 146 (158)
.|.-.+.|| .++.+.|+-.+++|.|+|..-+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 477899999 789999999999999999998754
No 29
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=77.70 E-value=5.3 Score=25.41 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=29.3
Q ss_pred ceEEEEEECCCCcccCCeEEEEeCcEEEEEEecCC
Q 031533 112 GKFMRKFVLPDNANVDKISALCQDGVLTVTVEKVP 146 (158)
Q Consensus 112 ~~f~r~~~LP~~vd~~~i~A~~~~GiL~I~lpK~~ 146 (158)
..|.-.+.|| .++.++|+-.++++.|+|+.-+..
T Consensus 14 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~ 47 (100)
T 3gla_A 14 NHFVLYADLP-GIDPSQIEVQMDKGILSIRGERKS 47 (100)
T ss_dssp SEEEEEEECT-TSCGGGCEEEEETTEEEEEEEECC
T ss_pred CEEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcC
Confidence 3577889999 789999999999999999987654
No 30
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=76.80 E-value=5.4 Score=25.06 Aligned_cols=32 Identities=9% Similarity=0.154 Sum_probs=28.4
Q ss_pred eEEEEEECCCCcccCCeEEEEeCcEEEEEEecC
Q 031533 113 KFMRKFVLPDNANVDKISALCQDGVLTVTVEKV 145 (158)
Q Consensus 113 ~f~r~~~LP~~vd~~~i~A~~~~GiL~I~lpK~ 145 (158)
.|.-.+.|| .++.+.|+-.+.+|.|+|..-+.
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 38 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 38 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEe
Confidence 477899999 88999999999999999998764
No 31
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=74.27 E-value=6.2 Score=25.67 Aligned_cols=33 Identities=9% Similarity=0.168 Sum_probs=28.8
Q ss_pred ceEEEEEECCCCcccCCeEEEEeCcEEEEEEecC
Q 031533 112 GKFMRKFVLPDNANVDKISALCQDGVLTVTVEKV 145 (158)
Q Consensus 112 ~~f~r~~~LP~~vd~~~i~A~~~~GiL~I~lpK~ 145 (158)
..|.-.+.|| .++.+.|+-.+++|.|+|...+.
T Consensus 12 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 12 DKFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp SEEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 3478899999 88999999999999999998654
No 32
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=73.43 E-value=9.5 Score=25.31 Aligned_cols=35 Identities=23% Similarity=0.203 Sum_probs=30.0
Q ss_pred ceEEEEEECCCCcccCCeEEEEeC-cEEEEEEecCCC
Q 031533 112 GKFMRKFVLPDNANVDKISALCQD-GVLTVTVEKVPP 147 (158)
Q Consensus 112 ~~f~r~~~LP~~vd~~~i~A~~~~-GiL~I~lpK~~~ 147 (158)
..|.-.+.|| .++.+.|+-.+.+ |.|+|+.-+...
T Consensus 34 ~~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 34 GYLVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp TEEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred CEEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 3577889999 7899999999999 999999987654
No 33
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=73.16 E-value=7.3 Score=25.06 Aligned_cols=33 Identities=12% Similarity=0.063 Sum_probs=29.0
Q ss_pred eEEEEEECCCCcccCCeEEEEeCcEEEEEEecCC
Q 031533 113 KFMRKFVLPDNANVDKISALCQDGVLTVTVEKVP 146 (158)
Q Consensus 113 ~f~r~~~LP~~vd~~~i~A~~~~GiL~I~lpK~~ 146 (158)
.|.-.+.|| .++.+.|+-.+++|.|+|..-+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 377789999 899999999999999999998754
No 34
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=72.91 E-value=11 Score=26.28 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=28.3
Q ss_pred EEEEEECCCCcccCCeEEEEeCcEEEEEEecCC
Q 031533 114 FMRKFVLPDNANVDKISALCQDGVLTVTVEKVP 146 (158)
Q Consensus 114 f~r~~~LP~~vd~~~i~A~~~~GiL~I~lpK~~ 146 (158)
|.-.+.|| .++.+.|+-.+++|.|+|+.-+..
T Consensus 68 ~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 68 IKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp EEEEEECT-TCCGGGEEEEEETTEEEEEEECCC
T ss_pred EEEEEECC-CCChHhEEEEEECCEEEEEEEEcc
Confidence 66788898 789999999999999999998765
No 35
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=72.24 E-value=8.7 Score=24.61 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=28.8
Q ss_pred ceEEEEEECCCCcccCCeEEEEeCcEEEEEEecC
Q 031533 112 GKFMRKFVLPDNANVDKISALCQDGVLTVTVEKV 145 (158)
Q Consensus 112 ~~f~r~~~LP~~vd~~~i~A~~~~GiL~I~lpK~ 145 (158)
..|.-.+.|| .++.+.|+-.++++.|+|+.-+.
T Consensus 16 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~ 48 (102)
T 4fei_A 16 THLDLLLDVP-GVDAGTLALAEDGGQLTVSGERP 48 (102)
T ss_dssp TEEEEEEECT-TCCGGGCEEEEETTEEEEEEEEC
T ss_pred CEEEEEEECC-CCchHhEEEEEECCEEEEEEEEe
Confidence 3588899999 88999999999999999988764
No 36
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=68.91 E-value=28 Score=26.18 Aligned_cols=69 Identities=20% Similarity=0.350 Sum_probs=46.0
Q ss_pred EEEEEE---cCCCCCCCeE-EEEe-cCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeEEEE
Q 031533 59 YVFIVD---MPGIKASEIK-VQVE-SENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVDKISALC 133 (158)
Q Consensus 59 y~i~~~---lPG~~~~~i~-V~~~-~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~ 133 (158)
|.+.++ |||+..+ ++ +.++ +++.|.+... +...++.-... |.+.++++|...-|+++|...
T Consensus 13 y~~~~~~~~l~g~~~~-lSGla~~~~~~~L~aV~d-----------~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~- 78 (255)
T 3qqz_A 13 YHATIDGKEIAGITNN-ISSLTWSAQSNTLFSTIN-----------KPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI- 78 (255)
T ss_dssp CEEEEEEEECTTCCSC-EEEEEEETTTTEEEEEEE-----------TTEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-
T ss_pred eEEEEeceECCCcccC-cceeEEeCCCCEEEEEEC-----------CCCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-
Confidence 444444 8999875 55 7776 4567877633 23444444444 889999999877888888643
Q ss_pred eCcEEEEE
Q 031533 134 QDGVLTVT 141 (158)
Q Consensus 134 ~~GiL~I~ 141 (158)
.+|.+.|.
T Consensus 79 ~~g~~~vs 86 (255)
T 3qqz_A 79 GDNQFVIS 86 (255)
T ss_dssp STTEEEEE
T ss_pred CCCEEEEE
Confidence 66666554
No 37
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=64.48 E-value=16 Score=25.19 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=27.2
Q ss_pred EEEEEECCCCcccCCeEEEE-eCcEEEEEEecCCC
Q 031533 114 FMRKFVLPDNANVDKISALC-QDGVLTVTVEKVPP 147 (158)
Q Consensus 114 f~r~~~LP~~vd~~~i~A~~-~~GiL~I~lpK~~~ 147 (158)
|.-.+.|| .++.+.|+-.+ +++.|+|+.-+...
T Consensus 55 ~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 55 HVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp EEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred EEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 66678899 78999999999 56799999977653
No 38
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=61.09 E-value=15 Score=22.32 Aligned_cols=30 Identities=20% Similarity=0.366 Sum_probs=18.6
Q ss_pred CCeEEEEeCcEEEEEEecCCCCCCeeEEEee
Q 031533 127 DKISALCQDGVLTVTVEKVPPPQPKTIQVQV 157 (158)
Q Consensus 127 ~~i~A~~~~GiL~I~lpK~~~~~~~~i~I~~ 157 (158)
..|.|.|+||+|.-.= +..-.+..++.|.+
T Consensus 3 k~IeAiYEnGVfkPLe-~l~L~EG~kV~I~I 32 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQ-KVDLKEGERVKIKL 32 (69)
T ss_dssp CCEEEEEETTEEEESS-CCCCCTTEEEEEEC
T ss_pred ceEEEEEECCEEeECC-cCCCCCCCEEEEEE
Confidence 4589999999997432 23333445555543
No 39
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=58.81 E-value=17 Score=23.50 Aligned_cols=18 Identities=11% Similarity=0.466 Sum_probs=15.2
Q ss_pred CCCeEEEEecCcEEEEEEE
Q 031533 70 ASEIKVQVESENVLVVSGE 88 (158)
Q Consensus 70 ~~~i~V~~~~~~~L~I~g~ 88 (158)
|+.|+|+++ ++.++|+|.
T Consensus 20 P~gV~V~i~-~~~VtVKGP 37 (100)
T 2cql_A 20 PENVDITLK-GRTVIVKGP 37 (100)
T ss_dssp CSSCEEEEE-TTEEEEEET
T ss_pred CCCCEEEEe-CCEEEEECC
Confidence 568899998 689999985
No 40
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=57.45 E-value=25 Score=25.20 Aligned_cols=45 Identities=27% Similarity=0.424 Sum_probs=31.4
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeEEEEeCcEEEEEEec
Q 031533 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVDKISALCQDGVLTVTVEK 144 (158)
Q Consensus 70 ~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GiL~I~lpK 144 (158)
|+.|+|+++ ++.++|+|. .|+..+.| +..+ +...+++.|.|+.+.
T Consensus 11 P~gV~V~i~-~~~VtVkGp----------------------kG~L~~~~--~~~v-----~i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVN-GNTVTVKGP----------------------KGELTRTF--HPDM-----TITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEE-TTEEEEEET----------------------TEEEEEEC--CTTC-----EEEEETTEEEEECSC
T ss_pred CCCCEEEEe-CCEEEEECC----------------------CeEEEEEc--CCCE-----EEEEeCCEEEEEcCC
Confidence 468899998 689999975 34444444 5444 445789998887654
No 41
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=57.27 E-value=17 Score=25.92 Aligned_cols=32 Identities=9% Similarity=0.121 Sum_probs=28.1
Q ss_pred EEEEEECCCCcccCCeEEEEeCcEEEEEEecCC
Q 031533 114 FMRKFVLPDNANVDKISALCQDGVLTVTVEKVP 146 (158)
Q Consensus 114 f~r~~~LP~~vd~~~i~A~~~~GiL~I~lpK~~ 146 (158)
|.-.+.|| .++.+.|+-.+++|.|+|+..+..
T Consensus 75 ~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 75 FSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 77789999 889999999999999999987643
No 42
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=54.58 E-value=31 Score=25.57 Aligned_cols=46 Identities=17% Similarity=0.232 Sum_probs=31.2
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeEEEEeCcEEEEEEecC
Q 031533 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVDKISALCQDGVLTVTVEKV 145 (158)
Q Consensus 70 ~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GiL~I~lpK~ 145 (158)
|+.|+|+++ ++.++|+|. .|+..+.| +..+ ....++|.|.|+.+..
T Consensus 39 P~gV~V~i~-~~~VtVKGP----------------------kG~L~~~~--~~~v-----~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQ-DGVFKVKGP----------------------KGELTVPY--NTEL-----TVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEe-CCEEEEECC----------------------CEEEEEEC--CCCe-----EEEEECCEEEEEcCCC
Confidence 468899998 689999975 33344444 5443 4456889888876543
No 43
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=50.38 E-value=32 Score=24.86 Aligned_cols=44 Identities=27% Similarity=0.471 Sum_probs=29.5
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeEEEEeCcEEEEEE
Q 031533 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVDKISALCQDGVLTVTV 142 (158)
Q Consensus 70 ~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GiL~I~l 142 (158)
|+.++|+++ |+.++|+|. .|+..+.|.-| . ++-..+++.|.|..
T Consensus 14 P~gV~v~i~-~~~V~VkGp----------------------kG~L~~~~~~~-~-----v~i~~~~~~l~v~~ 57 (184)
T 3j21_F 14 PEGVEVTVE-GYKVKVKGP----------------------KGELEREFFWP-G-----IQIFTEDGNVVIYK 57 (184)
T ss_dssp CSSCEEEES-SSEEEEECS----------------------SCEEEEECCCT-T-----CEEEEETTEEEEEC
T ss_pred CCCcEEEEe-CCEEEEEcC----------------------CeEEEEEecCC-c-----EEEEEeCCEEEEEE
Confidence 478999998 689999974 34445554322 3 34456788888864
No 44
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=47.35 E-value=60 Score=21.59 Aligned_cols=33 Identities=12% Similarity=0.163 Sum_probs=25.5
Q ss_pred cceEEEEEECCCCcccCCeEEEEeCcEEEEEEe
Q 031533 111 FGKFMRKFVLPDNANVDKISALCQDGVLTVTVE 143 (158)
Q Consensus 111 ~~~f~r~~~LP~~vd~~~i~A~~~~GiL~I~lp 143 (158)
.....-+|.||..++...+...+...-|.|.+.
T Consensus 13 ~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 13 LNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp TTEEEEEEECC---CCSCEEEEEETTEEEEEET
T ss_pred CCEEEEEEECCCCCCccceEEEEECCEEEEEEC
Confidence 445678899999999999999999999999873
No 45
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=45.96 E-value=44 Score=24.00 Aligned_cols=46 Identities=9% Similarity=0.254 Sum_probs=31.2
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeEEEEeCcEEEEEEec
Q 031533 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVDKISALCQDGVLTVTVEK 144 (158)
Q Consensus 70 ~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GiL~I~lpK 144 (158)
|+.++|+++ ++.++|+|. .|+..+.|. +..+ +...++|.|.|..+.
T Consensus 9 P~gV~v~i~-~~~vtVkGp----------------------kG~L~~~~~-~~~v-----~i~~~~~~i~v~~~~ 54 (178)
T 1vq8_E 9 PEDVDAEQD-HLDITVEGD----------------------NGSVTRRLW-YPDI-----DVSVDGDTVVIESDE 54 (178)
T ss_dssp CTTCEEEEE-TTEEEEEET----------------------TEEEEEECC-CTTC-----EEEEETTEEEEECSC
T ss_pred CCCCEEEEe-CCEEEEECC----------------------CeEEEEEEE-CCeE-----EEEEECCEEEEEcCC
Confidence 468899998 689999985 344445442 4333 455689998887654
No 46
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=43.26 E-value=17 Score=20.62 Aligned_cols=23 Identities=17% Similarity=0.318 Sum_probs=18.5
Q ss_pred CCCCeEEEEecCcEEEEEEEEecC
Q 031533 69 KASEIKVQVESENVLVVSGERKRD 92 (158)
Q Consensus 69 ~~~~i~V~~~~~~~L~I~g~~~~~ 92 (158)
.-+||.|..+ |+++++.|+.+-.
T Consensus 31 gyndinvtwd-gdtvtvegqlegg 53 (62)
T 2gjh_A 31 GYNDINVTWD-GDTVTVEGQLEGG 53 (62)
T ss_dssp TCCSCEEEEC-SSCEEEEEECCCC
T ss_pred CcccceeEEc-CCEEEEEeEEcCC
Confidence 4578999998 8999999986543
No 47
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=38.51 E-value=75 Score=22.71 Aligned_cols=43 Identities=19% Similarity=0.310 Sum_probs=29.7
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeEEEEeCcEEEEEE
Q 031533 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVDKISALCQDGVLTVTV 142 (158)
Q Consensus 70 ~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GiL~I~l 142 (158)
|+.|+|++. ++.++|+|. .|+..+.| ++.+ +-..+++.|.|..
T Consensus 12 P~gV~v~i~-~~~v~VkGp----------------------kG~L~~~~--~~~v-----~i~~~~~~l~v~~ 54 (180)
T 3v2d_H 12 PKGVSVEVA-PGRVKVKGP----------------------KGELEVPV--SPEM-----RVVVEEGVVRVER 54 (180)
T ss_dssp CTTCEEEEE-TTEEEEECS----------------------SCEEEEEC--CTTS-----EEEEETTEEEEEC
T ss_pred CCCcEEEEe-CCEEEEEeC----------------------CcEEEEEe--CCCE-----EEEEECCEEEEEE
Confidence 578999998 689999974 34444444 5444 3446789888874
No 48
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=36.76 E-value=89 Score=22.55 Aligned_cols=18 Identities=33% Similarity=0.521 Sum_probs=15.3
Q ss_pred CCCeEEEEecCcEEEEEEE
Q 031533 70 ASEIKVQVESENVLVVSGE 88 (158)
Q Consensus 70 ~~~i~V~~~~~~~L~I~g~ 88 (158)
|+.++|++. |+.++|+|.
T Consensus 13 P~gV~v~i~-~~~V~VkGP 30 (190)
T 3iz5_F 13 PEGVTVQVA-AKVVTVEGP 30 (190)
T ss_dssp CTTCEEEEE-TTEEEEEET
T ss_pred CCCCEEEEe-CCEEEEECC
Confidence 578999998 689999975
No 49
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=36.25 E-value=22 Score=23.28 Aligned_cols=17 Identities=41% Similarity=0.569 Sum_probs=14.5
Q ss_pred CeEEEEeCcEEEEEEec
Q 031533 128 KISALCQDGVLTVTVEK 144 (158)
Q Consensus 128 ~i~A~~~~GiL~I~lpK 144 (158)
.+.+.+.+|||+|+++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 47788999999999974
No 50
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=34.86 E-value=1e+02 Score=22.27 Aligned_cols=18 Identities=17% Similarity=0.427 Sum_probs=15.5
Q ss_pred CCCeEEEEecCcEEEEEEE
Q 031533 70 ASEIKVQVESENVLVVSGE 88 (158)
Q Consensus 70 ~~~i~V~~~~~~~L~I~g~ 88 (158)
|+.++|++. |+.++|+|.
T Consensus 13 P~gV~v~i~-~~~V~VkGP 30 (191)
T 3u5e_H 13 PEGVTVSIK-SRIVKVVGP 30 (191)
T ss_dssp CTTCEEEEE-TTEEEEEET
T ss_pred CCCcEEEEe-CCEEEEEcC
Confidence 578999998 689999975
No 51
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=31.50 E-value=35 Score=23.04 Aligned_cols=16 Identities=19% Similarity=0.283 Sum_probs=14.1
Q ss_pred eEEEEeCcEEEEEEec
Q 031533 129 ISALCQDGVLTVTVEK 144 (158)
Q Consensus 129 i~A~~~~GiL~I~lpK 144 (158)
+.+.+.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 6888999999999974
No 52
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=31.42 E-value=83 Score=20.60 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=27.0
Q ss_pred EEEeCCeEEEEEEc-CCCCCCCeEEEEecCcEEEEEEEE
Q 031533 52 VMEYPNSYVFIVDM-PGIKASEIKVQVESENVLVVSGER 89 (158)
Q Consensus 52 i~e~~d~y~i~~~l-PG~~~~~i~V~~~~~~~L~I~g~~ 89 (158)
+.+.++.+.|.+.+ ||.+++.|. .+. ++.|.|+-.-
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I~-g~~-~~~LkV~v~A 44 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSIV-GLH-GDEVKVAITA 44 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEEE-EEC-SSCEEEECCC
T ss_pred EEECCCeEEEEEEEeeCCCcceee-ccc-CCEEEEEEec
Confidence 56678889999998 999988873 456 4678877543
No 53
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=29.16 E-value=48 Score=20.63 Aligned_cols=23 Identities=17% Similarity=0.395 Sum_probs=17.7
Q ss_pred CCCCCeEEEEecCcEEEEEEEEec
Q 031533 68 IKASEIKVQVESENVLVVSGERKR 91 (158)
Q Consensus 68 ~~~~~i~V~~~~~~~L~I~g~~~~ 91 (158)
+.-++|.|.++ |+++++.|+.+-
T Consensus 74 lgyndinvtfd-gdtvtvegqleg 96 (106)
T 1qys_A 74 LGYNDINVTFD-GDTVTVEGQLEG 96 (106)
T ss_dssp TTCCEEEEEEE-TTEEEEEEEC--
T ss_pred hCCcceeEEEc-CCeEEEEeEEcC
Confidence 45578999998 899999998643
No 54
>4gzv_A Hypothetical protein; AN eight-stranded beta barrel, lipocalin family, structural joint center for structural genomics, JCSG; 1.95A {Bacteroides ovatus}
Probab=28.62 E-value=1.5e+02 Score=20.50 Aligned_cols=72 Identities=18% Similarity=0.208 Sum_probs=44.2
Q ss_pred CCCeeEEEeCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCccc
Q 031533 47 ATPADVMEYPNSYVFIVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANV 126 (158)
Q Consensus 47 ~p~~~i~e~~d~y~i~~~lPG~~~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~ 126 (158)
.|...|...+..|.--+-.|+- +..++..|+-+... .+.| .-...+++.+|.....
T Consensus 35 s~~~KIlS~DgtF~N~~m~~~~-----------~aiIt~yGtY~l~S-------D~~Y------~E~i~kni~~p~~~g~ 90 (142)
T 4gzv_A 35 SNTFKVLSDDGRIVNFTIIPGA-----------DAIITGYGTYKQLT-------DDSY------KESIEKNIHLPMLDNQ 90 (142)
T ss_dssp EEEEEEECTTSEEEEEECCTTS-----------CCEEEEEEEEEEEE-------TTEE------EEEEEEESSSGGGTTE
T ss_pred cCceEEECCCCcEEEEEEeCCC-----------CcEEEEeEEEEecC-------CCee------eeeecccccCccccCC
Confidence 4567787777776544445541 33455555544433 1222 1236788888988777
Q ss_pred CCe-EEEE-eCcEEEEEE
Q 031533 127 DKI-SALC-QDGVLTVTV 142 (158)
Q Consensus 127 ~~i-~A~~-~~GiL~I~l 142 (158)
+++ +-++ +|++|.|..
T Consensus 91 ~n~L~fe~~~dn~l~lsy 108 (142)
T 4gzv_A 91 DNILEFEIKDNDYLHLKY 108 (142)
T ss_dssp EEEEEEEEETTTEEEEEE
T ss_pred ccEEEEEEccCCEEEEEE
Confidence 764 7666 789999887
No 55
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=28.37 E-value=1.5e+02 Score=20.44 Aligned_cols=33 Identities=12% Similarity=0.198 Sum_probs=27.9
Q ss_pred cceEEEEEECCCCcccCCeEEEEeCcEEEEEEe
Q 031533 111 FGKFMRKFVLPDNANVDKISALCQDGVLTVTVE 143 (158)
Q Consensus 111 ~~~f~r~~~LP~~vd~~~i~A~~~~GiL~I~lp 143 (158)
.....-+|.||..+....+...+...-|+|.+.
T Consensus 22 ~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 22 LEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp SSEEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred CCEEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 455678899999999999999999988998773
No 56
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=27.56 E-value=34 Score=25.50 Aligned_cols=47 Identities=21% Similarity=0.352 Sum_probs=30.6
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeEEEEeCcEEEEEEecC
Q 031533 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVDKISALCQDGVLTVTVEKV 145 (158)
Q Consensus 70 ~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GiL~I~lpK~ 145 (158)
|+.|+|+++ ++.++|+|. .|...+. |+..|+.. ..++|.|.|..+..
T Consensus 54 P~gV~V~i~-~~~VtVKGP----------------------kG~L~~~--~~~~v~i~----~~e~~~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALE-GQDLKVKGP----------------------LGELALT--YPREVELT----KEESGFLRVKKTVE 100 (223)
T ss_dssp STTSCEEES-SSEEEECCS----------------------SCCEEEE--CCSSCEEE----ECSSSCEEEECSSC
T ss_pred CCCCEEEEe-CCEEEEECC----------------------CeEEEEE--cCCCEEEE----EecCCEEEEEcCCC
Confidence 467889998 689999974 3334444 46555331 45788888876543
No 57
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=27.32 E-value=1.1e+02 Score=20.33 Aligned_cols=29 Identities=21% Similarity=0.411 Sum_probs=19.3
Q ss_pred CeEEEE---eCcEEEEEEecCCCCCCeeEEEe
Q 031533 128 KISALC---QDGVLTVTVEKVPPPQPKTIQVQ 156 (158)
Q Consensus 128 ~i~A~~---~~GiL~I~lpK~~~~~~~~i~I~ 156 (158)
+|+..| .||+|.|++--....+...|.|+
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~ 130 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDKNSGKEQKITIK 130 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEEEECCCCEEEEEEEECCCCCEEEEEEe
Confidence 565555 59999999964444444666665
No 58
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=25.97 E-value=91 Score=22.53 Aligned_cols=23 Identities=9% Similarity=0.219 Sum_probs=16.9
Q ss_pred cCCCCCCCeEEEEecCcEEEEEEE
Q 031533 65 MPGIKASEIKVQVESENVLVVSGE 88 (158)
Q Consensus 65 lPG~~~~~i~V~~~~~~~L~I~g~ 88 (158)
.|=-=|+.++|+++ ++.++|+|.
T Consensus 8 ~pI~IP~gV~V~i~-~~~VtVkGp 30 (192)
T 2zkr_e 8 QTVDIPENVDITLK-GRTVIVKGP 30 (192)
T ss_dssp --CCCCTTCEEEEE-TTEEEEEET
T ss_pred CcEEcCCCCEEEEe-CCEEEEECC
Confidence 34444678999998 689999985
No 59
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=25.26 E-value=43 Score=23.95 Aligned_cols=43 Identities=21% Similarity=0.406 Sum_probs=28.8
Q ss_pred CCCeEEEEecCcEEEEEEEEecCCCCcCCCCCceEEEEeeecceEEEEEECCCCcccCCeEEEEeCcEEEEEE
Q 031533 70 ASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVDKISALCQDGVLTVTV 142 (158)
Q Consensus 70 ~~~i~V~~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GiL~I~l 142 (158)
|+.|+|++. ++.++|+|. .|+..+.| +..| +-..+++.|.|..
T Consensus 11 P~gV~v~i~-~~~V~VkGp----------------------kG~L~~~~--~~~v-----~i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKIN-GQVITIKGK----------------------NGELTRTL--NDAV-----EVKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEES-SSEEECCBT----------------------TBCCEEEC--CSSC-----EEEEETTEEEEEC
T ss_pred CCCcEEEEe-CCEEEEEcC----------------------CEEEEEEC--CCCE-----EEEEeCCEEEEEE
Confidence 578888888 689998874 23334444 5444 4456789888873
No 60
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=24.32 E-value=1.5e+02 Score=19.26 Aligned_cols=33 Identities=9% Similarity=0.228 Sum_probs=28.2
Q ss_pred cceEEEEEECCCCc-ccCCeEEEEeCcEEEEEEe
Q 031533 111 FGKFMRKFVLPDNA-NVDKISALCQDGVLTVTVE 143 (158)
Q Consensus 111 ~~~f~r~~~LP~~v-d~~~i~A~~~~GiL~I~lp 143 (158)
.....-+|.||..+ +.+.+...+...-|.|.+.
T Consensus 28 ~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 28 YTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp TTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred ccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 55677889999888 8999999999999999873
No 61
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=24.16 E-value=1.3e+02 Score=19.51 Aligned_cols=25 Identities=16% Similarity=0.149 Sum_probs=13.7
Q ss_pred EEEEECCCCcccCCeEEEEeCcEEEEEEec
Q 031533 115 MRKFVLPDNANVDKISALCQDGVLTVTVEK 144 (158)
Q Consensus 115 ~r~~~LP~~vd~~~i~A~~~~GiL~I~lpK 144 (158)
.|++..|.+ ++|.+++.+|.|.+.+
T Consensus 22 ~RSI~~~iP-----i~A~id~~~L~I~F~~ 46 (108)
T 3d33_A 22 IRSAATNCP-----ITVFTDGYLLTLKNAS 46 (108)
T ss_dssp ------CCS-----EEEEEETTEEEEEESS
T ss_pred ccccCCCCC-----cEEEEECCEEEEEECC
Confidence 477764433 3778888899988854
No 62
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=23.29 E-value=50 Score=22.39 Aligned_cols=17 Identities=29% Similarity=0.407 Sum_probs=14.5
Q ss_pred CCeEEEEeCcEEEEEEe
Q 031533 127 DKISALCQDGVLTVTVE 143 (158)
Q Consensus 127 ~~i~A~~~~GiL~I~lp 143 (158)
..+.+.+.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45778899999999995
No 63
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=21.63 E-value=64 Score=19.49 Aligned_cols=23 Identities=26% Similarity=0.410 Sum_probs=18.5
Q ss_pred CCCCCeEEEEecCcEEEEEEEEec
Q 031533 68 IKASEIKVQVESENVLVVSGERKR 91 (158)
Q Consensus 68 ~~~~~i~V~~~~~~~L~I~g~~~~ 91 (158)
|+.+.|.+...- +.|.|+|+.-.
T Consensus 18 Fd~e~i~L~T~~-G~L~IkG~~L~ 40 (71)
T 2ks0_A 18 FDPKEILLETIQ-GVLSIKGEKLG 40 (71)
T ss_dssp ECSSEEEEEETT-EEEEEEEECCC
T ss_pred ECCCEEEEEeCc-eEEEEEcCCcE
Confidence 578888898884 79999998643
No 64
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=21.55 E-value=1.7e+02 Score=18.95 Aligned_cols=35 Identities=11% Similarity=-0.006 Sum_probs=29.1
Q ss_pred ecceEEEEEECCCC--cccCCeEEEEeCcEEEEEEec
Q 031533 110 RFGKFMRKFVLPDN--ANVDKISALCQDGVLTVTVEK 144 (158)
Q Consensus 110 ~~~~f~r~~~LP~~--vd~~~i~A~~~~GiL~I~lpK 144 (158)
......-+|.||.. ++...+...+...-|.|.+.-
T Consensus 24 t~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg 60 (121)
T 3qor_A 24 TLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG 60 (121)
T ss_dssp CSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETT
T ss_pred ccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcC
Confidence 35567888999988 889999999998899998753
No 65
>3gbl_A BETA2-microglobulin; immune response, immunoglobulin domain, MHC I, secreted, immune system; 2.10A {Ctenopharyngodon idella} SCOP: b.1.1.0
Probab=20.00 E-value=1.6e+02 Score=17.99 Aligned_cols=25 Identities=12% Similarity=0.306 Sum_probs=20.9
Q ss_pred CCeEEEEEEcCCCCCCCeEEEEe-cC
Q 031533 56 PNSYVFIVDMPGIKASEIKVQVE-SE 80 (158)
Q Consensus 56 ~d~y~i~~~lPG~~~~~i~V~~~-~~ 80 (158)
++...|...+-||-|.+|+|... ||
T Consensus 18 ~~~~~L~C~~~gFyP~~i~v~W~~~g 43 (97)
T 3gbl_A 18 GKENTLICYVSGFHPPDISIELLKNG 43 (97)
T ss_dssp TCCEEEEEEEECCBSSCEEEEEEETT
T ss_pred CCcEEEEEEEcceeCCccEEEEEECC
Confidence 44678889999999999999988 44
Done!