BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031534
(158 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 292 bits (748), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 149/158 (94%), Positives = 149/158 (94%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINE----- 55
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT
Sbjct: 56 ----VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 112 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 289 bits (740), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/158 (93%), Positives = 149/158 (94%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MADQLT+DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINE----- 55
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT
Sbjct: 56 ----VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 112 NLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 279 bits (713), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/157 (90%), Positives = 146/157 (92%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLTD+QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKD NGFISAAELRHVMTN
Sbjct: 55 ---VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTDEEVDEMIREADVDGDGQ+NYEEFV+VMMAK
Sbjct: 112 LGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMAK 148
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 277 bits (709), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/157 (89%), Positives = 146/157 (92%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLTD+QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFLNLMARKMKDTDSEE+LKEAFRVFDKD NGFISAAELRHVMTN
Sbjct: 55 ---VDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTDEEVDEMIREADVDGDGQ+NYEEFV+VMMAK
Sbjct: 112 LGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMAK 148
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 273 bits (698), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/154 (90%), Positives = 143/154 (92%), Gaps = 9/154 (5%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
LTD+QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE--------- 51
Query: 65 VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE 124
VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKD NGFISAAELRHVMTNLGE
Sbjct: 52 VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGE 111
Query: 125 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
KLTDEEVDEMIREADVDGDGQ+NYEEFV+VMMAK
Sbjct: 112 KLTDEEVDEMIREADVDGDGQVNYEEFVQVMMAK 145
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 270 bits (690), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/158 (84%), Positives = 145/158 (91%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE----- 55
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMT
Sbjct: 56 ----VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 270 bits (689), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/158 (84%), Positives = 145/158 (91%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE----- 58
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMT
Sbjct: 59 ----VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 114
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 115 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 152
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 270 bits (689), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/158 (84%), Positives = 145/158 (91%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE----- 56
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMT
Sbjct: 57 ----VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 112
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 113 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 150
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 270 bits (689), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/158 (84%), Positives = 145/158 (91%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE----- 55
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMT
Sbjct: 56 ----VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 270 bits (689), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/158 (84%), Positives = 145/158 (91%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE----- 55
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMT
Sbjct: 56 ----VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQ 59
MA ++ D D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI EA
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA--- 129
Query: 60 DMINEVDADGNGTIDFPEFLNLMARKM 86
D DG+G +++ EF+ +M K+
Sbjct: 130 ------DIDGDGQVNYEEFVQMMTAKL 150
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 269 bits (688), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/158 (84%), Positives = 145/158 (91%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE----- 55
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMT
Sbjct: 56 ----VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 268 bits (686), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 134/158 (84%), Positives = 144/158 (91%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE----- 55
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMT
Sbjct: 56 ----VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 268 bits (685), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 133/158 (84%), Positives = 145/158 (91%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE----- 55
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMT
Sbjct: 56 ----VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVD+MIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 112 NLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 268 bits (685), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/158 (84%), Positives = 143/158 (90%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE----- 55
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMT
Sbjct: 56 ----VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M K
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 267 bits (683), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/158 (84%), Positives = 144/158 (91%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE----- 55
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMT
Sbjct: 56 ----VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVDEMIRE+D+DGDGQ+NYEEFV +M +K
Sbjct: 112 NLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTMMTSK 149
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 267 bits (683), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/157 (84%), Positives = 144/157 (91%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 60
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTN
Sbjct: 61 ---VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 117
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 118 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 154
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 267 bits (683), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/157 (84%), Positives = 144/157 (91%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTN
Sbjct: 55 ---VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 112 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 267 bits (682), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/157 (85%), Positives = 143/157 (91%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTN
Sbjct: 55 ---VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M AK
Sbjct: 112 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTAK 148
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 267 bits (682), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/156 (84%), Positives = 143/156 (91%), Gaps = 9/156 (5%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------- 355
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNL
Sbjct: 356 --VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 413
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
GEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 414 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 267 bits (682), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/156 (84%), Positives = 143/156 (91%), Gaps = 9/156 (5%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------- 355
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNL
Sbjct: 356 --VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 413
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
GEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 414 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 266 bits (681), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/156 (84%), Positives = 143/156 (91%), Gaps = 9/156 (5%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------- 356
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNL
Sbjct: 357 --VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 414
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
GEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 415 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 450
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 266 bits (680), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 133/157 (84%), Positives = 143/157 (91%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTN
Sbjct: 55 ---VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct: 112 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 148
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 266 bits (679), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/156 (84%), Positives = 143/156 (91%), Gaps = 9/156 (5%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------- 321
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNL
Sbjct: 322 --VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 379
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
GEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 380 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 415
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 266 bits (679), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/156 (84%), Positives = 143/156 (91%), Gaps = 9/156 (5%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------- 321
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNL
Sbjct: 322 --VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 379
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
GEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 380 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 415
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 266 bits (679), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/157 (84%), Positives = 144/157 (91%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTN
Sbjct: 55 ---VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTDEEVDEMIREA++DGDGQ+NYEEFV++M AK
Sbjct: 112 LGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMMTAK 148
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 265 bits (677), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 132/156 (84%), Positives = 143/156 (91%), Gaps = 9/156 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTN
Sbjct: 55 ---VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
LGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M A
Sbjct: 112 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 154 VMMAK 158
+M K
Sbjct: 71 MMARK 75
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 265 bits (677), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 132/157 (84%), Positives = 144/157 (91%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTN
Sbjct: 55 ---VDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 112 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 265 bits (677), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 132/157 (84%), Positives = 143/157 (91%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 55
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTN
Sbjct: 56 ---VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGE LTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 113 LGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 265 bits (677), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 132/157 (84%), Positives = 143/157 (91%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTN
Sbjct: 55 ---VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGE LTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 112 LGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 264 bits (675), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/156 (83%), Positives = 143/156 (91%), Gaps = 9/156 (5%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------- 346
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
VDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNL
Sbjct: 347 --VDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 404
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
GEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 405 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 440
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 264 bits (675), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/155 (84%), Positives = 142/155 (91%), Gaps = 9/155 (5%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------- 318
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNL
Sbjct: 319 --VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 376
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
GEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M A
Sbjct: 377 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 411
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 10/105 (9%)
Query: 61 MINEVDADGNGTIDFPEFLNLMARKM----KDTDSEE---ELKEAFRVFDKDQNGFISAA 113
++N ++ G IDF E N++ K+ +D +EE E KEAF +FDKD +G I+
Sbjct: 238 LVNRIELKG---IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTK 294
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+ +M K
Sbjct: 295 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 339
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 264 bits (675), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/156 (83%), Positives = 142/156 (91%), Gaps = 9/156 (5%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------- 355
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
VDADGNGTIDFPEFL +MAR MKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNL
Sbjct: 356 --VDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 413
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
GEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 414 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 264 bits (675), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/156 (83%), Positives = 143/156 (91%), Gaps = 9/156 (5%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------- 354
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
VDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNL
Sbjct: 355 --VDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 412
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
GEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 413 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 264 bits (674), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/156 (83%), Positives = 142/156 (91%), Gaps = 9/156 (5%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------- 355
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
VDADGNGTIDFPEFL +MARKMK TDSEEE++EAFRVFDKD NG+ISAAELRHVMTNL
Sbjct: 356 --VDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 413
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
GEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 414 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 264 bits (674), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/155 (84%), Positives = 142/155 (91%), Gaps = 9/155 (5%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
QLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE-------- 52
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 123
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLG
Sbjct: 53 -VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 111
Query: 124 EKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
EKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 112 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 146
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 263 bits (671), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 130/158 (82%), Positives = 143/158 (90%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+ DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE----- 354
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADG+GTIDFPEFL +MARKMK TDSEEE++EAFRVFDKD NG+ISAAELRHVMT
Sbjct: 355 ----VDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 410
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 411 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 263 bits (671), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/158 (82%), Positives = 143/158 (90%), Gaps = 9/158 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+ DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE----- 354
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
VDADG+GTIDFPEFL +MARKMK TDSEEE++EAFRVFDKD NG+ISAAELRHVMT
Sbjct: 355 ----VDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 410
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
NLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 411 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 262 bits (669), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 130/153 (84%), Positives = 141/153 (92%), Gaps = 9/153 (5%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------- 53
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNL
Sbjct: 54 --VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 111
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
GEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M
Sbjct: 112 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 144
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Query: 154 VMMAK 158
+M K
Sbjct: 70 MMARK 74
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 261 bits (668), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 130/156 (83%), Positives = 142/156 (91%), Gaps = 9/156 (5%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------- 355
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
VDADG+GTIDFPEFL +MARKMK TDSEEE++EAFRVFDKD NG+ISAAELRHVMTNL
Sbjct: 356 --VDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 413
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
GEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 414 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 260 bits (664), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/152 (84%), Positives = 140/152 (92%), Gaps = 9/152 (5%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
QLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE-------- 52
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 123
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLG
Sbjct: 53 -VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 111
Query: 124 EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
EKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M
Sbjct: 112 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 154 VMMAK 158
+M K
Sbjct: 69 MMARK 73
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 260 bits (664), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/153 (84%), Positives = 140/153 (91%), Gaps = 9/153 (5%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEV 65
T++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE V
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE---------V 53
Query: 66 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK 125
DADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEK
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 113
Query: 126 LTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 114 LTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 146
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 259 bits (663), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/153 (84%), Positives = 140/153 (91%), Gaps = 9/153 (5%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEV 65
T++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE V
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE---------V 51
Query: 66 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK 125
DADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEK
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 111
Query: 126 LTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 112 LTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 144
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 259 bits (663), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/153 (84%), Positives = 140/153 (91%), Gaps = 9/153 (5%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE--------- 51
Query: 65 VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE 124
VDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGE
Sbjct: 52 VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 111
Query: 125 KLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
KLTDEEVDEMIREAD+DGDGQ+NYEEFV++M A
Sbjct: 112 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 144
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Query: 154 VMMAK 158
+M K
Sbjct: 68 MMARK 72
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 258 bits (658), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/157 (83%), Positives = 141/157 (89%), Gaps = 11/157 (7%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFL +MARKMKD SEEE++EAFRVFDKD NGFISAAELRHVMTN
Sbjct: 55 ---VDADGNGTIDFPEFLTMMARKMKD--SEEEIREAFRVFDKDGNGFISAAELRHVMTN 109
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct: 110 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 146
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 256 bits (653), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 125/156 (80%), Positives = 140/156 (89%), Gaps = 9/156 (5%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTK+LGTVMRSLGQNPTEAELQDMINE
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINE------- 355
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
V ADGNGTIDFP+FL +MARKMKDTDSEEE++EAFRVF KD NG+ISAA+LRHVMTNL
Sbjct: 356 --VGADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNL 413
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
GEKLTDEEVDEMIREA +DGDGQ+NYE+FV++M AK
Sbjct: 414 GEKLTDEEVDEMIREAGIDGDGQVNYEQFVQMMTAK 449
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 254 bits (650), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/157 (80%), Positives = 142/157 (90%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
A+QLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFL+LMARKMK+ DSEEEL EAF+VFD+D NG ISAAELRHVMTN
Sbjct: 55 ---VDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTD+EVDEMIREAD+DGDG INYEEFV++M++K
Sbjct: 112 LGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK 148
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 253 bits (647), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/157 (77%), Positives = 142/157 (90%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++Q++EFKEAFSLFDKDGDGCITT+ELGTVMRSLGQNPTEAEL+DM++E
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
+D DGNGT+DFPEFL +MARKMKDTD+EEE++EAFRVFDKD NGF+SAAELRHVMT
Sbjct: 55 ---IDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTR 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKL+DEEVDEMIR AD DGDGQ+NYEEFV+V+++K
Sbjct: 112 LGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK 148
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 252 bits (644), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 126/157 (80%), Positives = 141/157 (89%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
A +LT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFL+LMARKMK+ DSEEEL EAF+VFD+D NG ISAAELRHVMTN
Sbjct: 55 ---VDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTD+EVDEMIREAD+DGDG INYEEFV++M++K
Sbjct: 112 LGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK 148
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 250 bits (638), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/152 (82%), Positives = 138/152 (90%), Gaps = 10/152 (6%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEV 65
T++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE V
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE---------V 51
Query: 66 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK 125
DADGNGTIDFPEFL +MARKMKDTDSEE ++EAFRVFDKD NG+ISAAELRHVMTNLGEK
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDTDSEE-IREAFRVFDKDGNGYISAAELRHVMTNLGEK 110
Query: 126 LTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
LTDEEVDEMIREA++DGDGQ+NYEEFV++M A
Sbjct: 111 LTDEEVDEMIREANIDGDGQVNYEEFVQMMTA 142
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 154 VMMAK 158
+M K
Sbjct: 67 MMARK 71
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 9/83 (10%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MA ++ D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI EA +
Sbjct: 68 MARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANI-- 125
Query: 61 MINEVDADGNGTIDFPEFLNLMA 83
DG+G +++ EF+ +M
Sbjct: 126 -------DGDGQVNYEEFVQMMT 141
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 249 bits (635), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 126/157 (80%), Positives = 135/157 (85%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTV RSLGQNPTEAELQD INE
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFL ARK KDTDSEEE++EAFRVFDKD NG+ISAAELRHV TN
Sbjct: 55 ---VDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTDEEVDE IREAD+DGDGQ+NYEEFV+ AK
Sbjct: 112 LGEKLTDEEVDEXIREADIDGDGQVNYEEFVQXXTAK 148
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 248 bits (632), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/157 (79%), Positives = 135/157 (85%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTV RSLGQNPTEAELQD INE
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINE------ 55
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTIDFPEFL ARK KDTDSEEE++EAFRVFDKD NG+ISAAELRHV TN
Sbjct: 56 ---VDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTN 112
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTDEEVD+ IREAD+DGDGQ+NYEEFV+ AK
Sbjct: 113 LGEKLTDEEVDQXIREADIDGDGQVNYEEFVQXXTAK 149
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 241 bits (614), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/157 (78%), Positives = 133/157 (84%), Gaps = 9/157 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTV RSLG NPTEAELQD INE
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTI+FPEFL AR KDTDSEEE++EAFRVFDKD NG+ISAAELRHV TN
Sbjct: 55 ---VDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
LGEKLTDEEVDE IREAD+DGDGQ+NYEEFV+ AK
Sbjct: 112 LGEKLTDEEVDEXIREADIDGDGQVNYEEFVQXXTAK 148
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 234 bits (596), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/156 (74%), Positives = 137/156 (87%), Gaps = 9/156 (5%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
AD L+++QI +FKEAF LFDKDGDGCIT +EL TV+RSL QNPTE ELQDMI+E
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VDADGNGTI+F EFL+LMA+K+KDTD+EEELKEAF+VFDKDQNG+ISA+ELRHVM N
Sbjct: 55 ---VDADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMIN 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
LGEKLTDEEV++MI+EAD+DGDGQ+NYEEFVK+MM
Sbjct: 112 LGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMT 147
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 91 SEEEL---KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 147
SEE++ KEAF +FDKD +G I+ EL V+ +L + T+EE+ +MI E D DG+G I
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 148 YEEFVKVMMAK 158
++EF+ +M K
Sbjct: 65 FDEFLSLMAKK 75
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 194 bits (494), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/155 (61%), Positives = 125/155 (80%), Gaps = 9/155 (5%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
+LT++QI+EFK+AF FDK+G G I T+ELGT+MR+LGQNPTEAELQD+I EAE
Sbjct: 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAE------ 56
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 123
+ NG ++F EF +MA++M++TD+EEE++EAF++FD+D +GFIS AELR VM NLG
Sbjct: 57 ---NNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLG 113
Query: 124 EKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
EK+TDEE+DEMIREAD DGDG INYEEFV ++ K
Sbjct: 114 EKVTDEEIDEMIREADFDGDGMINYEEFVWMISQK 148
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 179 bits (453), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 118/155 (76%), Gaps = 10/155 (6%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
M+ LT++QI+EFKEAF+LFDKD G I+ EL TVMRSLG +P+EAE+ D++NE
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNE----- 55
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
+D DGN I+F EFL LM+R++K DSE+EL EAF+VFDK+ +G ISAAEL+HV+T
Sbjct: 56 ----IDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLT 111
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
++GEKLTD EVDEM+RE DG G+IN ++F ++
Sbjct: 112 SIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALL 145
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 178 bits (451), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 119/154 (77%), Gaps = 10/154 (6%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
+ LT++QI+EFKEAF+LFDKD +G I++ EL TVMRSLG +P+EAE+ D++NE
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNE------ 55
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
+D DGN I+F EFL LM+R++K DSE+EL EAF+VFDK+ +G ISAAEL+HV+T+
Sbjct: 56 ---IDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTS 112
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+GEKLTD EVD+M+RE DG G+IN ++F ++
Sbjct: 113 IGEKLTDAEVDDMLREVS-DGSGEINIQQFAALL 145
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 177 bits (449), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 119/154 (77%), Gaps = 10/154 (6%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
+ LT++QI+EFKEAF+LFDKD +G I++ EL TVMRSLG +P+EAE+ D++NE
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
+D DGN I+F EFL LM+R++K DSE+EL EAF+VFDK+ +G ISAAEL+HV+T+
Sbjct: 55 ---IDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTS 111
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+GEKLTD EVD+M+RE DG G+IN ++F ++
Sbjct: 112 IGEKLTDAEVDDMLREVS-DGSGEINIQQFAALL 144
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 162 bits (410), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 88/99 (88%), Gaps = 9/99 (9%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPT EAELQDM
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT---------EAELQDM 51
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFR 100
INEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFR
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 154 VMMAK 158
+M K
Sbjct: 71 MMARK 75
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 156 bits (394), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 103/131 (78%), Gaps = 9/131 (6%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
+ LT++QI+EFKEAF+LFDKD +G I++ EL TVMRSLG +P+EAE+ D++NE
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNE------ 54
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
+D DGN I+F EFL LM+R++K DSE+EL EAF+VFDK+ +G ISAAEL+HV+T+
Sbjct: 55 ---IDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTS 111
Query: 122 LGEKLTDEEVD 132
+GEKLTD E++
Sbjct: 112 IGEKLTDAELE 122
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD NG IS++EL VM +LG ++ EV++++ E DVDG+ QI + EF+
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 154 VM 155
+M
Sbjct: 71 LM 72
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 153 bits (386), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/88 (88%), Positives = 79/88 (89%), Gaps = 9/88 (10%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLTD+QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPT EAELQDM
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPT---------EAELQDM 51
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDT 89
INEVDADGNGTIDFPEFLNLMARKMKDT
Sbjct: 52 INEVDADGNGTIDFPEFLNLMARKMKDT 79
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 154 VMMAK 158
+M K
Sbjct: 71 LMARK 75
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 145 bits (366), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/89 (83%), Positives = 78/89 (87%), Gaps = 9/89 (10%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPT EAELQDM
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT---------EAELQDM 51
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTD 90
INEVDADGNGTIDFPEFL +MARKMKDTD
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARKMKDTD 80
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 154 VMMAK 158
+M K
Sbjct: 71 MMARK 75
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 144 bits (362), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/88 (82%), Positives = 77/88 (87%), Gaps = 9/88 (10%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPT EAELQDM
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT---------EAELQDM 51
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDT 89
INEVDADGNGTIDFPEFL +MARKMKDT
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARKMKDT 79
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 154 VMMAK 158
+M K
Sbjct: 71 MMARK 75
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 142 bits (359), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 111/154 (72%), Gaps = 12/154 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL +I E
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE--------- 64
Query: 65 VDADGNGTIDFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VD DG+GTIDF EFL +M R+MK+ SEEEL + FR+FDK+ +GFI EL ++
Sbjct: 65 VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRA 124
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
GE +T+E+++++++++D + DG+I+++EF+K+M
Sbjct: 125 TGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 154 VMMAK 158
VMM +
Sbjct: 80 VMMVR 84
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 142 bits (359), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 112/154 (72%), Gaps = 12/154 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL +I E
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE--------- 64
Query: 65 VDADGNGTIDFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VD DG+GTIDF EFL +M R+MK+ SEEEL++ FR+FDK+ +GFI EL ++
Sbjct: 65 VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRA 124
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
GE +T+E+++++++++D + DG+I+++EF+K+M
Sbjct: 125 TGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 154 VMMAK 158
VMM +
Sbjct: 80 VMMVR 84
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 142 bits (358), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 110/154 (71%), Gaps = 12/154 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL +I E
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE--------- 64
Query: 65 VDADGNGTIDFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VD DG+GTIDF EFL +M R+MK+ SEEEL FR+FDK+ +GFI EL ++
Sbjct: 65 VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA 124
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
GE +T+E+++++++++D + DG+I+++EF+K+M
Sbjct: 125 TGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 154 VMMAK 158
VMM +
Sbjct: 80 VMMVR 84
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 142 bits (357), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 107/154 (69%), Gaps = 12/154 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+++ I+EFK AF +FD DG G I+ KELGTVMR LGQ PT+ EL +I E
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEE--------- 61
Query: 65 VDADGNGTIDFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VD DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD++ +G+I A EL +
Sbjct: 62 VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRA 121
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
GE +TDEE++ ++++ D + DG+I+++EF+K+M
Sbjct: 122 SGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFL- 76
Query: 154 VMMAK 158
VMM +
Sbjct: 77 VMMVR 81
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 99/151 (65%), Gaps = 9/151 (5%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
LT++Q E +EAF LFD DG G I KEL MR+LG P + E++ MI +
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEP---------KKEEIKKMIAD 52
Query: 65 VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE 124
+D DG+GTIDF EFL +M KM + DS EE+ +AFR+FD D+ G IS L+ V LGE
Sbjct: 53 IDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGE 112
Query: 125 KLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+TDEE+ EMI EAD DGDG++N EEF ++M
Sbjct: 113 NMTDEELQEMIDEADRDGDGEVNEEEFFRIM 143
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%)
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 149
+ ++E++EAF +FD D +G I A EL+ M LG + EE+ +MI + D DG G I++E
Sbjct: 5 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFE 64
Query: 150 EFVKVMMAK 158
EF+++M AK
Sbjct: 65 EFLQMMTAK 73
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDA 67
D E +AF LFD D G I+ K L V + LG+N T+ ELQ+MI+E D
Sbjct: 78 DSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDE---------ADR 128
Query: 68 DGNGTIDFPEFLNLMAR 84
DG+G ++ EF +M +
Sbjct: 129 DGDGEVNEEEFFRIMKK 145
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 141 bits (356), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 110/154 (71%), Gaps = 12/154 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL +I E
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE--------- 61
Query: 65 VDADGNGTIDFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VD DG+GTIDF EFL +M R+MK+ SEEEL FR+FDK+ +GFI EL ++
Sbjct: 62 VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA 121
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
GE +T+E+++++++++D + DG+I+++EF+K+M
Sbjct: 122 TGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 155
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 76
Query: 154 VMMAK 158
VMM +
Sbjct: 77 VMMVR 81
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 141 bits (356), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 77/88 (87%), Gaps = 9/88 (10%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPT EAELQDM
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT---------EAELQDM 51
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDT 89
INEVDADG+GTIDFPEFL +MARKMKDT
Sbjct: 52 INEVDADGDGTIDFPEFLTMMARKMKDT 79
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DGDG I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 154 VMMAK 158
+M K
Sbjct: 71 MMARK 75
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 141 bits (356), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 108/154 (70%), Gaps = 12/154 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+++ I+EFK AF +FD DG G I+ KELGTVMR LGQ PT+ EL D I I E
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEEL-DAI--------IEE 61
Query: 65 VDADGNGTIDFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VD DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD++ +G+I A EL +
Sbjct: 62 VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRA 121
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
GE +TDEE++ ++++ D + DG+I+++EF+K+M
Sbjct: 122 SGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFL- 76
Query: 154 VMMAK 158
VMM +
Sbjct: 77 VMMVR 81
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 140 bits (353), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 75/86 (87%), Gaps = 9/86 (10%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPT EAELQDM
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT---------EAELQDM 51
Query: 62 INEVDADGNGTIDFPEFLNLMARKMK 87
INEVDADGNGTIDFPEFL +MARKMK
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARKMK 77
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 154 VMMAK 158
+M K
Sbjct: 71 MMARK 75
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 140 bits (352), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 109/154 (70%), Gaps = 12/154 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT + EL +I E
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPT---------KEELDAIIEE 64
Query: 65 VDADGNGTIDFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
VD DG+GTIDF EFL +M R+MK+ SEEEL FR+FDK+ +GFI EL ++
Sbjct: 65 VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA 124
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
GE + +E+++++++++D + DG+I+++EF+K+M
Sbjct: 125 TGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 154 VMMAK 158
VMM +
Sbjct: 80 VMMVR 84
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/69 (100%), Positives = 69/69 (100%)
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 149
DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 150 EFVKVMMAK 158
EFVKVMMAK
Sbjct: 61 EFVKVMMAK 69
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI EA D DG+G
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA---------DVDGDG 55
Query: 72 TIDFPEFLNLMARK 85
I++ EF+ +M K
Sbjct: 56 QINYEEFVKVMMAK 69
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 74/85 (87%), Gaps = 9/85 (10%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPT EAELQDM
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT---------EAELQDM 51
Query: 62 INEVDADGNGTIDFPEFLNLMARKM 86
INEVDADGNGTIDFPEFL +MARKM
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARKM 76
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 154 VMMAK 158
+M K
Sbjct: 71 MMARK 75
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 111/158 (70%), Gaps = 13/158 (8%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+E
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDE----- 63
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRH 117
VD DG+GT+DF EFL +M R MKD +EEEL + FR+FDK+ +G+I EL+
Sbjct: 64 ----VDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKI 119
Query: 118 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
++ GE +T+++++E++++ D + DG+I+Y+EF++ M
Sbjct: 120 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 100/151 (66%), Gaps = 9/151 (5%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
LT++Q E +EAF LFD DG G I KEL MR+LG P + E++ MI+E
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEP---------KKEEIKKMISE 72
Query: 65 VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE 124
+D DG+GTIDF EFL +M KM + DS EE+ +AFR+FD D +G I+ +LR V LGE
Sbjct: 73 IDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGE 132
Query: 125 KLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
LT+EE+ EMI EAD + D +I+ +EF+++M
Sbjct: 133 NLTEEELQEMIAEADRNDDNEIDEDEFIRIM 163
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 149
+ ++E++EAF +FD D +G I A EL+ M LG + EE+ +MI E D DG G I++E
Sbjct: 25 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 84
Query: 150 EFVKVMMAK 158
EF+ +M AK
Sbjct: 85 EFLTMMTAK 93
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDA 67
D E +AF LFD D G IT K+L V + LG+N TE ELQ+M I E D
Sbjct: 98 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEM---------IAEADR 148
Query: 68 DGNGTIDFPEFLNLMAR 84
+ + ID EF+ +M +
Sbjct: 149 NDDNEIDEDEFIRIMKK 165
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/84 (82%), Positives = 73/84 (86%), Gaps = 9/84 (10%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPT EAELQDMI
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT---------EAELQDMI 52
Query: 63 NEVDADGNGTIDFPEFLNLMARKM 86
NEVDADGNGTIDFPEFL +MARKM
Sbjct: 53 NEVDADGNGTIDFPEFLTMMARKM 76
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 154 VMMAK 158
+M K
Sbjct: 71 MMARK 75
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 136 bits (342), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 65/74 (87%), Positives = 72/74 (97%)
Query: 85 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 144
KMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDG
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
Query: 145 QINYEEFVKVMMAK 158
Q+NYEEFV++M AK
Sbjct: 61 QVNYEEFVQMMTAK 74
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDA 67
D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI EA D
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA---------DI 56
Query: 68 DGNGTIDFPEFLNLMARK 85
DG+G +++ EF+ +M K
Sbjct: 57 DGDGQVNYEEFVQMMTAK 74
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 136 bits (342), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/84 (82%), Positives = 73/84 (86%), Gaps = 9/84 (10%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPT EAELQDM
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT---------EAELQDM 51
Query: 62 INEVDADGNGTIDFPEFLNLMARK 85
INEVDADGNGTIDFPEFL +MARK
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARK 75
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 154 VMMAK 158
+M K
Sbjct: 71 MMARK 75
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 136 bits (342), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/84 (82%), Positives = 73/84 (86%), Gaps = 9/84 (10%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPT EAELQDM
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT---------EAELQDM 52
Query: 62 INEVDADGNGTIDFPEFLNLMARK 85
INEVDADGNGTIDFPEFL +MARK
Sbjct: 53 INEVDADGNGTIDFPEFLTMMARK 76
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 154 VMMAK 158
+M K
Sbjct: 72 MMARK 76
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 136 bits (342), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+E
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDE----- 63
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRH 117
VD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+
Sbjct: 64 ----VDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKI 119
Query: 118 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
++ GE +T+++++E++++ D + DG+I+Y+EF++ M
Sbjct: 120 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 135 bits (339), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+E
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDE----- 63
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRH 117
VD DG+GT+DF EFL +M R MKD +EEEL + FR+FDK+ +G+I EL+
Sbjct: 64 ----VDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKI 119
Query: 118 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
++ GE +T+++++E++++ D + DG+I+Y+EF++ M
Sbjct: 120 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/73 (87%), Positives = 71/73 (97%)
Query: 86 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 145
MKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 146 INYEEFVKVMMAK 158
+NYEEFV++M AK
Sbjct: 61 VNYEEFVQMMTAK 73
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDA 67
D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI EA D
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA---------DI 55
Query: 68 DGNGTIDFPEFLNLMARK 85
DG+G +++ EF+ +M K
Sbjct: 56 DGDGQVNYEEFVQMMTAK 73
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+E
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDE----- 63
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRH 117
VD DG+GT+DF EFL +M R MKD SEEEL + FR++DK+ +G+I EL+
Sbjct: 64 ----VDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKI 119
Query: 118 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
++ GE +T+++++E++++ D + DG+I+Y+EF++ M
Sbjct: 120 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+E
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDE----- 63
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRH 117
VD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+
Sbjct: 64 ----VDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKI 119
Query: 118 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
++ GE +T+++++E++++ D + DG+I+Y+E+++ M
Sbjct: 120 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLEFM 157
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 132 bits (332), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+E
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDE----- 63
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRH 117
VD DG+GT+DF EFL +M R MKD SEEEL + FR+ DK+ +G+I EL+
Sbjct: 64 ----VDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKI 119
Query: 118 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
++ GE +T+++++E++++ D + DG+I+Y+EF++ M
Sbjct: 120 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 132 bits (332), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+E
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDE----- 63
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRH 117
VD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+
Sbjct: 64 ----VDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKI 119
Query: 118 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
++ GE +T+++++E++++ D + DG+I+Y+E ++ M
Sbjct: 120 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLEFM 157
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 132 bits (332), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 72/85 (84%), Gaps = 9/85 (10%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
DQLT++QI+EFKEAFSL+DKDGDG ITTKELGTVMRSLG NPT EAELQDMI
Sbjct: 2 DQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPT---------EAELQDMI 52
Query: 63 NEVDADGNGTIDFPEFLNLMARKMK 87
NEVDADGNGTIDFPEFL +MAR MK
Sbjct: 53 NEVDADGNGTIDFPEFLTMMARIMK 77
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF ++DKD +G I+ EL VM +LG T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFL- 69
Query: 154 VMMAK 158
MMA+
Sbjct: 70 TMMAR 74
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 131 bits (329), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/68 (91%), Positives = 66/68 (97%)
Query: 56 AELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL 115
AELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAEL
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Query: 116 RHVMTNLG 123
RHVMTNLG
Sbjct: 61 RHVMTNLG 68
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG 41
MA ++ D D E +EAF +FDKDG+G I+ EL VM +LG
Sbjct: 27 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 130 EVDEMIREADVDGDGQINYEEFVKVMMAK 158
E+ +MI E D DG+G I++ EF+ +M K
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARK 30
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 131 bits (329), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 100/150 (66%), Gaps = 9/150 (6%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEV 65
T++Q E +EAF LFD DG G I KEL MR+LG P + E++ MI+E+
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEP---------KKEEIKKMISEI 51
Query: 66 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK 125
D +G G ++F +FL +M +KM + D++EE+ +AF++FD D+ G IS L+ V LGE
Sbjct: 52 DKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGEN 111
Query: 126 LTDEEVDEMIREADVDGDGQINYEEFVKVM 155
LTDEE+ EMI EAD DGDG+++ +EF+++M
Sbjct: 112 LTDEELQEMIDEADRDGDGEVSEQEFLRIM 141
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 149
+ ++E++EAF +FD D G I EL+ M LG + EE+ +MI E D +G G++N+
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62
Query: 150 EFVKVMMAK 158
+F+ VM K
Sbjct: 63 DFLTVMTQK 71
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDA 67
D E +AF LFD D G I+ K L V + LG+N T+ ELQ+MI+E D
Sbjct: 76 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDE---------ADR 126
Query: 68 DGNGTIDFPEFLNLMAR 84
DG+G + EFL +M +
Sbjct: 127 DGDGEVSEQEFLRIMKK 143
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 130 bits (328), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/73 (86%), Positives = 70/73 (95%)
Query: 86 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 145
MKDTDSEEE++EAFRV DKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 81
Query: 146 INYEEFVKVMMAK 158
+NYEEFV++M AK
Sbjct: 82 VNYEEFVQMMTAK 94
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E +EAF + DKDG+G I+ EL VM +LG+ T+ E+ +MI EA D DG+G
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA---------DIDGDG 80
Query: 72 TIDFPEFLNLMARK 85
+++ EF+ +M K
Sbjct: 81 QVNYEEFVQMMTAK 94
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 130 bits (327), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/71 (87%), Positives = 69/71 (97%)
Query: 88 DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 147
DTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+N
Sbjct: 1 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 148 YEEFVKVMMAK 158
YEEFV++M AK
Sbjct: 61 YEEFVQMMTAK 71
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDA 67
D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI EA D
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA---------DI 53
Query: 68 DGNGTIDFPEFLNLMARK 85
DG+G +++ EF+ +M K
Sbjct: 54 DGDGQVNYEEFVQMMTAK 71
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 127 bits (319), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/71 (84%), Positives = 69/71 (97%)
Query: 88 DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 147
DTDSEEE++EAFRVFDKD NG+ISAA+LRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+N
Sbjct: 2 DTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 61
Query: 148 YEEFVKVMMAK 158
YE+FV++M AK
Sbjct: 62 YEDFVQMMTAK 72
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 9/74 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E +EAF +FDKDG+G I+ +L VM +LG+ T+ E+ +MI EA D DG+G
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREA---------DIDGDG 58
Query: 72 TIDFPEFLNLMARK 85
+++ +F+ +M K
Sbjct: 59 QVNYEDFVQMMTAK 72
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 127 bits (318), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/69 (86%), Positives = 67/69 (97%)
Query: 89 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 148
TDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 149 EEFVKVMMA 157
EEFV++M A
Sbjct: 61 EEFVQMMTA 69
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 9/71 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI EA D DG+G
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA---------DIDGDG 56
Query: 72 TIDFPEFLNLM 82
+++ EF+ +M
Sbjct: 57 QVNYEEFVQMM 67
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/70 (82%), Positives = 68/70 (97%)
Query: 88 DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 147
DTD+EEELKEAF+VFDKDQNG+ISA+ELRHVM NLGEKLTDEEV++MI+EAD+DGDGQ+N
Sbjct: 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 148 YEEFVKVMMA 157
YEEFVK+MM
Sbjct: 64 YEEFVKMMMT 73
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 9/71 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MI EA+L DG+G
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADL---------DGDG 60
Query: 72 TIDFPEFLNLM 82
+++ EF+ +M
Sbjct: 61 QVNYEEFVKMM 71
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 66/67 (98%)
Query: 89 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 148
TDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 149 EEFVKVM 155
EEFV++M
Sbjct: 61 EEFVQMM 67
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 9/71 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI EA D DG+G
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA---------DIDGDG 56
Query: 72 TIDFPEFLNLM 82
+++ EF+ +M
Sbjct: 57 QVNYEEFVQMM 67
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 123 bits (308), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 68/73 (93%)
Query: 86 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 145
MK+ DSEEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTD+EVDEMIREAD+DGDG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 146 INYEEFVKVMMAK 158
INYEEFV++M++K
Sbjct: 61 INYEEFVRMMVSK 73
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E EAF +FD+DG+G I+ EL VM +LG+ T+ E+ +MI EA D DG+G
Sbjct: 9 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREA---------DIDGDG 59
Query: 72 TIDFPEFLNLMARK 85
I++ EF+ +M K
Sbjct: 60 HINYEEFVRMMVSK 73
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 122 bits (307), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 65/67 (97%)
Query: 92 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 151
EEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 152 VKVMMAK 158
V++M AK
Sbjct: 61 VQMMTAK 67
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 9/74 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI EA D DG+G
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA---------DIDGDG 53
Query: 72 TIDFPEFLNLMARK 85
+++ EF+ +M K
Sbjct: 54 QVNYEEFVQMMTAK 67
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 122 bits (306), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 88/151 (58%), Gaps = 10/151 (6%)
Query: 7 DDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVD 66
DDQ+SEFKEAF LFD + G IT + L TV++ G + A +M NE D
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVR---------VEPAAFNEMFNEAD 52
Query: 67 ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL 126
A GNG I FPEFL++M R+MK T SE+ L++AFR FD + G+I A L+ + NLG++L
Sbjct: 53 ATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRL 112
Query: 127 TDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
E E + + + GQI Y+ F+ M
Sbjct: 113 KPHEFAEFLGITETE-KGQIRYDNFINTMFT 142
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/68 (82%), Positives = 66/68 (97%)
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 149
D+EEELKEAF+VFDKDQNG+ISA+ELRHVM NLGEKLTDEEV++MI+EAD+DGDGQ+NYE
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 150 EFVKVMMA 157
EFVK+MM
Sbjct: 61 EFVKMMMT 68
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 9/71 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MI EA+L DG+G
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADL---------DGDG 55
Query: 72 TIDFPEFLNLM 82
+++ EF+ +M
Sbjct: 56 QVNYEEFVKMM 66
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 119 bits (298), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
+++Q +EFKEAF LFD+ GDG I + G VMR+LGQNPT AE+ ++ + +M +
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 65 VDADGNGTIDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
T+ F +FL +M K KD E+ E RVFDK+ NG + AE+RHV+ L
Sbjct: 61 -------TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTL 113
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
GEK+T+EEV++++ + D +G INYEE V+++++
Sbjct: 114 GEKMTEEEVEQLVAGHE-DSNGCINYEELVRMVLS 147
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 119 bits (298), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
+++Q +EFKEAF LFD+ GDG I + G VMR+LGQNPT AE+ ++ + +M +
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 62
Query: 65 VDADGNGTIDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
T+ F +FL +M K KD E+ E RVFDK+ NG + AE+RHV+ L
Sbjct: 63 -------TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTL 115
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
GEK+T+EEV++++ + D +G INYEE V+++++
Sbjct: 116 GEKMTEEEVEQLVAGHE-DSNGCINYEELVRMVLS 149
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 117 bits (293), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 95/156 (60%), Gaps = 10/156 (6%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
+ DQ+ EFKEAF LFD+ GDG I + G VMR+LGQNPT AE+ ++ + ++ +
Sbjct: 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKS 62
Query: 64 EVDADGNGTIDFPEFLNLM--ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
+DF FL ++ K + + E+ E FRVFDK+ NG + AELRHV+T
Sbjct: 63 R-------RVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTT 115
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
LGEK+T+EEV E + D +G INYE F+K +++
Sbjct: 116 LGEKMTEEEV-ETVLAGHEDSNGCINYEAFLKHILS 150
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 116 bits (291), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 71/88 (80%), Gaps = 9/88 (10%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
AD L+++QI +FKEAF LFDKDGDGCIT +EL TV+RSL QNPT E ELQDM
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPT---------EEELQDM 51
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDT 89
I+EVDADGNGTI+F EFL+LMA+K+KDT
Sbjct: 52 ISEVDADGNGTIEFDEFLSLMAKKVKDT 79
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 91 SEEEL---KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 147
SEE++ KEAF +FDKD +G I+ EL V+ +L + T+EE+ +MI E D DG+G I
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 148 YEEFVKVMMAK 158
++EF+ +M K
Sbjct: 65 FDEFLSLMAKK 75
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 115 bits (289), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 91/147 (61%), Gaps = 13/147 (8%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDAD 68
QI EFKEAF++ D++ DG I ++L ++ S+G+NPT+ L+ M++EA
Sbjct: 5 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAP----------- 53
Query: 69 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD 128
G I+F FL + K+ TD E+ ++ AF FD++ +GFI LR ++T +G++ TD
Sbjct: 54 --GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTD 111
Query: 129 EEVDEMIREADVDGDGQINYEEFVKVM 155
EEVDEM REA +D G NY EF +++
Sbjct: 112 EEVDEMYREAPIDKKGNFNYVEFTRIL 138
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 93 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
+E KEAF + D++++GFI +L ++ ++G+ TDE ++ M+ EA G IN+ F+
Sbjct: 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA----PGPINFTMFL 62
Query: 153 KVMMAK 158
+ K
Sbjct: 63 TMFGEK 68
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 111 bits (278), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 99/152 (65%), Gaps = 10/152 (6%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDA 67
D+I++FKEAF LFD+ GD IT ++G ++R+LGQNPT AE+ ++ ++M +
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAK--- 57
Query: 68 DGNGTIDFPEFLNLM--ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK 125
I F EFL ++ A KD + E+ E RVFDK+ NG + AELRHV+ LGEK
Sbjct: 58 ----KITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEK 113
Query: 126 LTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
+T+EEV+E+++ + D +G INYE FVK +M+
Sbjct: 114 MTEEEVEELMKGQE-DSNGCINYEAFVKHIMS 144
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 68/85 (80%), Gaps = 9/85 (10%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
AD L+++QI +FKEAF LFDKDGDGCIT +EL TV+RSL QNPT E ELQDM
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPT---------EEELQDM 51
Query: 62 INEVDADGNGTIDFPEFLNLMARKM 86
I+EVDADGNGTI+F EFL+LMA+K+
Sbjct: 52 ISEVDADGNGTIEFDEFLSLMAKKV 76
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 88 DTDSEEEL---KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 144
D SEE++ KEAF +FDKD +G I+ EL V+ +L + T+EE+ +MI E D DG+G
Sbjct: 2 DILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNG 61
Query: 145 QINYEEFVKVMMAK 158
I ++EF+ +M K
Sbjct: 62 TIEFDEFLSLMAKK 75
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 110 bits (275), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 88/146 (60%), Gaps = 13/146 (8%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
+ +E F +FDKD DG ++ +ELG+ +RSLG+NPT AEL + + ++
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEF---------- 55
Query: 72 TIDFPEFLNLMARKMK-DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 130
D F + + +K T+ +E+ +AFR DK+ NG I AELR ++ NLG+ LT E
Sbjct: 56 --DLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSE 113
Query: 131 VDEMIREADVDGDGQINYEEFVKVMM 156
V+E+++E V GDG INYE FV +++
Sbjct: 114 VEELMKEVSVSGDGAINYESFVDMLV 139
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDA 67
+Q E +AF DK+G+G I EL ++ +LG D + +E+++++ EV
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLG---------DALTSSEVEELMKEVSV 123
Query: 68 DGNGTIDFPEFLNLM 82
G+G I++ F++++
Sbjct: 124 SGDGAINYESFVDML 138
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
Query: 89 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 148
T S ++++E F++FDKD +G +S EL + +LG+ T+ E++ + GQ+N
Sbjct: 1 TASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNA 52
Query: 149 EEF 151
+EF
Sbjct: 53 KEF 55
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 92/154 (59%), Gaps = 18/154 (11%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEV 65
TDD S +K+AFSLFD+ G G I +G ++R+ GQNPT AE I E+
Sbjct: 2 TDD--SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE-------------ITEI 46
Query: 66 DADGNGTIDFPEFLNLMARK--MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 123
++ +D +FL ++ R EE + F+VFDKD G I ELR+V+T+LG
Sbjct: 47 ESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLG 106
Query: 124 EKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
EKL++EE+DE+++ V DG +NY +FV++++A
Sbjct: 107 EKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA 139
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 93/148 (62%), Gaps = 10/148 (6%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
+FKEAF LFD+ GD IT ++G + R+LGQNPT AE+ ++ ++M
Sbjct: 7 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEM-------NAA 59
Query: 72 TIDFPEFLNLM--ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 129
I F EFL ++ A KD + E+ E RVFDK+ NG + AELRHV+ LGEK+T+E
Sbjct: 60 AITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEE 119
Query: 130 EVDEMIREADVDGDGQINYEEFVKVMMA 157
EV+E+++ + D +G INYE FVK +M+
Sbjct: 120 EVEELMKGQE-DSNGCINYEAFVKHIMS 146
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD--GDGQINY 148
+ ++ KEAF +FD+ + I+A+++ + LG+ T+ E+++++ + I +
Sbjct: 4 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 63
Query: 149 EEFVKVMMA 157
EEF+ ++ A
Sbjct: 64 EEFLPMLQA 72
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 93/148 (62%), Gaps = 10/148 (6%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
+FKEAF LFD+ GD IT ++G + R+LGQNPT AE+ ++ ++M
Sbjct: 9 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEM-------NAA 61
Query: 72 TIDFPEFLNLM--ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 129
I F EFL ++ A KD + E+ E RVFDK+ NG + AELRHV+ LGEK+T+E
Sbjct: 62 AITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEE 121
Query: 130 EVDEMIREADVDGDGQINYEEFVKVMMA 157
EV+E+++ + D +G INYE FVK +M+
Sbjct: 122 EVEELMKGQE-DSNGCINYEAFVKHIMS 148
Score = 33.1 bits (74), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD--GDGQINY 148
+ ++ KEAF +FD+ + I+A+++ + LG+ T+ E+++++ + I +
Sbjct: 6 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 65
Query: 149 EEFVKVMMA 157
EEF+ ++ A
Sbjct: 66 EEFLPMLQA 74
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 97/160 (60%), Gaps = 14/160 (8%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
M L ++I E +EAF FDKD DG I ++LG MR++G PTE EL EL
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMEL------IELSQ 54
Query: 61 MINEVDADGNGTIDFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELR 116
IN + G +DF +F+ LM K+ D +EL++AFR FD + +G IS +ELR
Sbjct: 55 QIN---MNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELR 111
Query: 117 HVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
M LG ++ +++E+IR+ D++GDG++++EEFV++M
Sbjct: 112 EAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
+ E ++AF FD +GDG I+T EL MR L L + +++++I +VD +G
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRKL--------LGHQVGHRDIEEIIRDVDLNG 138
Query: 70 NGTIDFPEFLNLMAR 84
+G +DF EF+ +M+R
Sbjct: 139 DGRVDFEEFVRMMSR 153
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 47/66 (71%)
Query: 93 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
EEL+EAFR FDKD++G+I+ +L + M +G T+ E+ E+ ++ +++ G +++++FV
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 153 KVMMAK 158
++M K
Sbjct: 71 ELMGPK 76
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 96/157 (61%), Gaps = 14/157 (8%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
L ++I E +EAF FDKD DG I ++LG MR++G PTE EL EL IN
Sbjct: 18 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMEL------IELSQQIN 71
Query: 64 EVDADGNGTIDFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELRHVM 119
+ G +DF +F+ LM K+ D +EL++AFR FD + +G IS +ELR M
Sbjct: 72 ---MNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAM 128
Query: 120 TN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
LG ++ +++E+IR+ D++GDG++++EEFV++M
Sbjct: 129 RKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 165
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
+ E ++AF FD +GDG I+T EL MR L L + +++++I +VD +G
Sbjct: 101 VKELRDAFREFDTNGDGEISTSELREAMRKL--------LGHQVGHRDIEEIIRDVDLNG 152
Query: 70 NGTIDFPEFLNLMAR 84
+G +DF EF+ +M+R
Sbjct: 153 DGRVDFEEFVRMMSR 167
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 72 TIDFPEFLNLMARKMKDTDSEE--ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 129
+ +P L ++RK + EE EL+EAFR FDKD++G+I+ +L + M +G T+
Sbjct: 4 CVKYP--LRNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEM 61
Query: 130 EVDEMIREADVDGDGQINYEEFVKVMMAK 158
E+ E+ ++ +++ G +++++FV++M K
Sbjct: 62 ELIELSQQINMNLGGHVDFDDFVELMGPK 90
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 106 bits (265), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 97/160 (60%), Gaps = 14/160 (8%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
M L ++I E +EAF FDKD DG I ++LG MR++G PTE EL EL
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMEL------IELSQ 54
Query: 61 MINEVDADGNGTIDFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELR 116
IN + G +DF +F+ LM K+ D +EL++AFR FD + +G IS +ELR
Sbjct: 55 QIN---MNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELR 111
Query: 117 HVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
M LG ++ +++E+IR+ D++GDG++++EEFV++M
Sbjct: 112 EAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
+ E ++AF FD +GDG I+T EL MR+L L + +++++I +VD +G
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRAL--------LGHQVGHRDIEEIIRDVDLNG 138
Query: 70 NGTIDFPEFLNLMAR 84
+G +DF EF+ +M+R
Sbjct: 139 DGRVDFEEFVRMMSR 153
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 47/66 (71%)
Query: 93 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
EEL+EAFR FDKD++G+I+ +L + M +G T+ E+ E+ ++ +++ G +++++FV
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 153 KVMMAK 158
++M K
Sbjct: 71 ELMGPK 76
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+ +L ++Q E EAFSLFD + DG + EL M++LG + + E+ D
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFE---------LPKREILD 63
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
+I+E D++G + + +F +M K+ D +E+K AF++FD D G IS LR V
Sbjct: 64 LIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAK 123
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 154
LGE LTDEE+ MI E D+DGDG+IN EF+ +
Sbjct: 124 ELGETLTDEELRAMIEEFDLDGDGEINENEFIAI 157
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 149
+ ++E+ EAF +FD + +GF+ EL+ M LG +L E+ ++I E D +G + Y+
Sbjct: 20 EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYD 79
Query: 150 EFVKVMMAK 158
+F VM K
Sbjct: 80 DFYIVMGEK 88
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 94/151 (62%), Gaps = 9/151 (5%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
+LT++Q E +EAF LFD DG G I KEL R+LG P + E++ I+E
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEI------- 76
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 123
D +G G +F +FL + +K + D++EE+ +AF++FD D+ G IS L+ V LG
Sbjct: 77 --DKEGTGKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG 134
Query: 124 EKLTDEEVDEMIREADVDGDGQINYEEFVKV 154
E LTDEE+ E I EAD DGDG+++ +EF+++
Sbjct: 135 ENLTDEELQEXIDEADRDGDGEVSEQEFLRI 165
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 92 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 151
++E++EAF +FD D G I EL+ LG + EE+ + I E D +G G+ N+ +F
Sbjct: 30 KQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDF 89
Query: 152 VKVMMAK 158
+ V K
Sbjct: 90 LTVXTQK 96
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 15/145 (10%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMIN-EAELQDMINEVDADGNGT 72
K+ F+LFDK G G I LG +R++G NPT +QD+IN ++ L+D +
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDA---------SS 57
Query: 73 IDFPEFLNLMARKMKDTDSEEELK-----EAFRVFDKDQNGFISAAELRHVMTNLGEKLT 127
+ + L+ K+ D+ + K +AF+VFDK+ G +S +LR+++T LGEKLT
Sbjct: 58 LTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLT 117
Query: 128 DEEVDEMIREADVDGDGQINYEEFV 152
D EVDE+++ +VD +G+I+Y++F+
Sbjct: 118 DAEVDELLKGVEVDSNGEIDYKKFI 142
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
D T + +F +AF +FDK+ G ++ +L ++ LG+ T+AE+ +++ E+
Sbjct: 75 DATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEV---- 130
Query: 63 NEVDADGNGTIDFPEFLNLMARK 85
D NG ID+ +F+ + R+
Sbjct: 131 -----DSNGEIDYKKFIEDVLRQ 148
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 64/86 (74%), Gaps = 9/86 (10%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
+ LT++QI+EFKEAF+LFDKD +G I++ EL TVMRSLG +P+ EAE+ D+
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPS---------EAEVNDL 51
Query: 62 INEVDADGNGTIDFPEFLNLMARKMK 87
+NE+D DGN I+F EFL LM+R++K
Sbjct: 52 MNEIDVDGNHQIEFSEFLALMSRQLK 77
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E KEAF +FDKD NG IS++EL VM +LG ++ EV++++ E DVDG+ QI + EF+
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 154 VM 155
+M
Sbjct: 71 LM 72
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 96.3 bits (238), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 10/88 (11%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLTD+Q +EFK AF +F +D DGCI+TKELG VMR LGQNPT ELQ+
Sbjct: 9 VEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPT---------PEELQE 59
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKD 88
MI+EVD DG+GT+DF EFL +M R MKD
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRCMKD 87
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFDKD-QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F +D ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 96.3 bits (238), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 92/162 (56%), Gaps = 21/162 (12%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
+L+ D+I + K+ F LFD DG DG + +LG V R LG NP +D+ M
Sbjct: 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKM 58
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRH 117
G ++ F EFL M D E+ + EAF+ FD++ GFIS AELRH
Sbjct: 59 -------GEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRH 108
Query: 118 VMTNLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 157
V++ LGE+L+DEEVDE+I D+ D +G + YEEFVK +MA
Sbjct: 109 VLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMA 150
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 96.3 bits (238), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+ +L ++Q E EAFSLFD + DG + EL ++LG + + E+ D
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFE---------LPKREILD 63
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
+I+E D++G + +F + K+ D +E+K AF++FD D G IS LR V
Sbjct: 64 LIDEYDSEGRHLXKYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAK 123
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 154
LGE LTDEE+ I E D+DGDG+IN EF+ +
Sbjct: 124 ELGETLTDEELRAXIEEFDLDGDGEINENEFIAI 157
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 95.9 bits (237), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 90/159 (56%), Gaps = 15/159 (9%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
+L+ D+I + KE F LFD DG DG + ++G V R LG NP +D+ M
Sbjct: 3 KLSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRN---EDVFAVGGTHKM 59
Query: 62 INEVDADGNGTIDFPEFLNLMARKMK-DTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
G ++ F EFL M + + + EAF+ FD++ GFIS AELRHV++
Sbjct: 60 -------GEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLS 112
Query: 121 NLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 157
LGE+L+DEEVDE+I D+ D +G + YEEFVK +M
Sbjct: 113 GLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMT 151
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 90/159 (56%), Gaps = 15/159 (9%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
+L+ D+I + KE F LFD DG DG + ++G V R LG NP +D+ M
Sbjct: 2 KLSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRN---EDVFAVGGTHKM 58
Query: 62 INEVDADGNGTIDFPEFLNLMARKMK-DTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
G ++ F EFL M + + + EAF+ FD++ GFIS AELRHV++
Sbjct: 59 -------GEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLS 111
Query: 121 NLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 157
LGE+L+DEEVDE+I D+ D +G + YEEFVK +M
Sbjct: 112 GLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMT 150
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 21/162 (12%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
+L+ D+I + K+ F LFD DG DG + +LG V R LG NP +D+ M
Sbjct: 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKM 58
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRH 117
G ++ F EFL M D E+ + EAF+ FD++ GFIS AELRH
Sbjct: 59 -------GEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRH 108
Query: 118 VMTNLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 157
V+T LGE+L+DE+VDE+I+ D+ D +G + YE+FVK +MA
Sbjct: 109 VLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 21/162 (12%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
+L+ D+I + K+ F LFD DG DG + +LG V R LG NP +D+ M
Sbjct: 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKM 58
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRH 117
G ++ F EFL M D E+ + EAF+ FD++ GFIS AELRH
Sbjct: 59 -------GEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRH 108
Query: 118 VMTNLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 157
V+T LGE+L+DE+VDE+I+ D+ D +G + YE+FVK +MA
Sbjct: 109 VLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 10/88 (11%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F +D DGCI+TKELG VMR LGQNPT ELQ+
Sbjct: 9 VEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPT---------PEELQE 59
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKD 88
MI+EVD DG+GT+DF EFL +M R MKD
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRCMKD 87
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFDKD-QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F +D ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 92/161 (57%), Gaps = 21/161 (13%)
Query: 5 LTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
L+ D+I + K+ F LFD DG DG + +LG V R LG NP +D+ M
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKM- 56
Query: 63 NEVDADGNGTIDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRHV 118
G ++ F EFL M D E+ + EAF+ FD++ GFIS AELRHV
Sbjct: 57 ------GEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHV 107
Query: 119 MTNLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 157
+T LGE+L+DE+VDE+I+ D+ D +G + YE+FVK +MA
Sbjct: 108 LTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 92.8 bits (229), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 91/160 (56%), Gaps = 21/160 (13%)
Query: 6 TDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
+ D+I + K+ F LFD DG DG + +LG V R LG NP +D+ M
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKM-- 55
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRHVM 119
G ++ F EFL M D E+ + EAF+ FD++ GFIS AELRHV+
Sbjct: 56 -----GEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVL 107
Query: 120 TNLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 157
T LGE+L+DE+VDE+I+ D+ D +G + YE+FVK +MA
Sbjct: 108 TALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 147
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 92.8 bits (229), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 91/160 (56%), Gaps = 21/160 (13%)
Query: 6 TDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
+ D+I + K+ F LFD DG DG + +LG V R LG NP +D+ M
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKM-- 55
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRHVM 119
G ++ F EFL M D E+ + EAF+ FD++ GFIS AELRHV+
Sbjct: 56 -----GEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVL 107
Query: 120 TNLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 157
T LGE+L+DE+VDE+I+ D+ D +G + YE+FVK +MA
Sbjct: 108 TALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 147
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 92.8 bits (229), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 92/162 (56%), Gaps = 21/162 (12%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
+L+ D+I + K+ F LF DG DG + +LG V R LG NP +D+ M
Sbjct: 2 KLSQDEIDDLKDVFELFAFWDGRDGAVDAFKLGDVCRCLGINPRN---EDVFAVGGTHKM 58
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRH 117
G ++ F EFL M D E+ + EAF+ FD++ GFIS AELRH
Sbjct: 59 -------GEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRH 108
Query: 118 VMTNLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 157
V+T LGE+L+DE+VDE+I+ D+ D +G + YE+FVK +MA
Sbjct: 109 VLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 92.8 bits (229), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 4 QLTDDQISEFKEAFSLFD-KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMI 62
+L+ +Q+ + AF F+ +G G ++T ++G ++ LG T++ ++ +I+E
Sbjct: 6 KLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDE------- 58
Query: 63 NEVDADGNGTIDFPEFLNLMAR----KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHV 118
D GNG IDF F + AR ++ ++EL+EAFR++DK+ NG+IS +R +
Sbjct: 59 --FDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREI 116
Query: 119 MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
+ L E L+ E++D MI E D DG G +++EEF+ VM
Sbjct: 117 LAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 62/88 (70%), Gaps = 10/88 (11%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F + DGCI+TKELG VMR LGQNPT ELQ+
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPT---------PEELQE 59
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKD 88
MI+EVD DG+GT+DF EFL +M R MKD
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRCMKD 87
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFDKD-QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F + ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 60/84 (71%), Gaps = 9/84 (10%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT + EL +I E
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPT---------KCELDAIICE 64
Query: 65 VDADGNGTIDFPEFLNLMARKMKD 88
VD DG+GTIDF EFL +M R+MK+
Sbjct: 65 VDEDGSGTIDFEEFLVMMVRQMKE 88
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E K AF +FD D G IS EL VM LG+ T E+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFL- 79
Query: 154 VMMAK 158
VMM +
Sbjct: 80 VMMVR 84
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 61/84 (72%), Gaps = 9/84 (10%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL D I I E
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEEL-DAI--------IEE 64
Query: 65 VDADGNGTIDFPEFLNLMARKMKD 88
VD DG+GTIDF EFL +M R+MK+
Sbjct: 65 VDEDGSGTIDFEEFLVMMVRQMKE 88
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 154 VMMAK 158
VMM +
Sbjct: 80 VMMVR 84
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 62/88 (70%), Gaps = 10/88 (11%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPT---------PEELQE 59
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKD 88
MI+EVD DG+GT+DF E+L +MAR MKD
Sbjct: 60 MIDEVDEDGSGTVDFDEWLVMMARCMKD 87
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++E++
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 153 KVMMAK 158
VMMA+
Sbjct: 79 -VMMAR 83
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 61/88 (69%), Gaps = 10/88 (11%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPT---------PEELQE 59
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKD 88
MI+EVD DG+GT+DF EFL +M R MKD
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRCMKD 87
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 59/83 (71%), Gaps = 9/83 (10%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT + EL +I E
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPT---------KEELDAIIEE 53
Query: 65 VDADGNGTIDFPEFLNLMARKMK 87
VD DG+GTIDF EFL +M R+MK
Sbjct: 54 VDEDGSGTIDFEEFLVMMVRQMK 76
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 68
Query: 154 VMMAK 158
VMM +
Sbjct: 69 VMMVR 73
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 89.7 bits (221), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 12/157 (7%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
A++L++++I KE F + D D G IT EL ++ +G E+E++D+++ A
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAA----- 55
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
D D +GTID+ EF+ + + EE L AF FDKD +G+I+ E++ +
Sbjct: 56 ----DIDKSGTIDYGEFIAATVH-LNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKD 110
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
G L D +D+MI+E D D DGQI+Y EF +M +
Sbjct: 111 FG--LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKR 145
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 89.7 bits (221), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 10/88 (11%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPT---------PEELQE 59
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKD 88
MI+EVD DG+GT+DF E+L +M R MKD
Sbjct: 60 MIDEVDEDGSGTVDFDEWLVMMVRCMKD 87
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++E++
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 89.4 bits (220), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 59/84 (70%), Gaps = 9/84 (10%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+++ I+EFK AF +FD DG G I+TK LGTVMR LGQNPT + EL +I E
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPT---------KEELDAIIEE 64
Query: 65 VDADGNGTIDFPEFLNLMARKMKD 88
VD DG+GTIDF EFL +M R+MK+
Sbjct: 65 VDEDGSGTIDFEEFLVMMVRQMKE 88
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E K AF +FD D G IS L VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 154 VMMAK 158
VMM +
Sbjct: 80 VMMVR 84
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 10/88 (11%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+E
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDE----- 63
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKD 88
VD DG+GT+DF EFL +M R MKD
Sbjct: 64 ----VDEDGSGTVDFDEFLVMMVRSMKD 87
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 14/151 (9%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
T Q+ EFKEAF L D+D DG I+ ++ SLG+ TE EL M+ EA
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAP------- 103
Query: 65 VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE 124
G I+F FL + ++ TD E+ + AF +FD + +G L+ +T GE
Sbjct: 104 ------GPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGE 156
Query: 125 KLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
K + +EVD+ + EA +DG+G I+ ++F +++
Sbjct: 157 KFSQDEVDQALSEAPIDGNGLIDIKKFAQIL 187
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDF 75
AF+LFD +GDG + L + + G+ ++ E+ ++EA + DGNG ID
Sbjct: 131 AFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPI---------DGNGLIDI 180
Query: 76 PEFLNLMARKMKD 88
+F ++ + K+
Sbjct: 181 KKFAQILTKGAKE 193
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 10/88 (11%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+E
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDE----- 63
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKD 88
VD DG+GT+DF EFL +M R MKD
Sbjct: 64 ----VDEDGSGTVDFDEFLVMMVRSMKD 87
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 10/88 (11%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+E
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDE----- 63
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKD 88
VD DG+GT+DF EFL +M R MKD
Sbjct: 64 ----VDEDGSGTVDFDEFLVMMVRSMKD 87
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 153 KVMMAK 158
VMM +
Sbjct: 79 -VMMVR 83
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 14/151 (9%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
+L+ Q+ E KEAF++ D+D DG I ++L + SLG+ P + EL M+ E
Sbjct: 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECP------ 62
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 123
G ++F FL L K+ TD E+ L+ AF +FD+D GFI L+ ++ N+G
Sbjct: 63 -------GQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMG 115
Query: 124 EKLTDEEVDEMIREADVDGDGQINYEEFVKV 154
+ + EE+ + ++A + + Q NY + V +
Sbjct: 116 DNFSKEEIKNVWKDAPLK-NKQFNYNKMVDI 145
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 12/152 (7%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+A+ L++++I+ KE F+ D D G IT +EL ++ +G N + E+E+ D
Sbjct: 17 IAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGAN---------LKESEILD 67
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
+ D D +GTID+ EF+ + + E+ L AF FDKD +G+I+ EL+
Sbjct: 68 LXQAADVDNSGTIDYKEFIAATLH-LNKIEREDHLFAAFTYFDKDGSGYITPDELQQACE 126
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
G + D ++E+ R+ D D DG+I+Y EFV
Sbjct: 127 EFG--VEDVRIEELXRDVDQDNDGRIDYNEFV 156
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 77 EFLNLMARKMKDTDSEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 133
+F R + ++ SEEE LKE F D D++G I+ EL+ + +G L + E+ +
Sbjct: 8 KFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILD 67
Query: 134 MIREADVDGDGQINYEEFVKVMM 156
+ + ADVD G I+Y+EF+ +
Sbjct: 68 LXQAADVDNSGTIDYKEFIAATL 90
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 16/160 (10%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
QLT D+I E +E F LFD DG DG + ++G ++R LG NPTEA++ ++
Sbjct: 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKM--- 58
Query: 62 INEVDADGNGTIDFPEFLNLMAR-KMKDTDSE-EELKEAFRVFDKDQNGFISAAELRHVM 119
G E L + KDT + +E EAF+ FD++ G IS+AE+R+V+
Sbjct: 59 -------GEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVL 111
Query: 120 TNLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 157
LGE++T+++ +++ D+ D DG I YE+ +K +MA
Sbjct: 112 KMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
M+ + T EF EAF FD++G G I++ E+ V++ LG+ TE + D+ ++++
Sbjct: 75 MSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIRE 134
Query: 61 MINEVDADGN 70
D DGN
Sbjct: 135 -----DIDGN 139
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 62/83 (74%)
Query: 73 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 132
++F +FL +M +KM + D++EE+ +AF++FD D+ G IS L+ V LGE LTDEE+
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 133 EMIREADVDGDGQINYEEFVKVM 155
EMI EAD DGDG+++ +EF+++M
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRIM 83
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDA 67
D E +AF LFD D G I+ K L V + LG+N T+ ELQ+MI+EA D
Sbjct: 18 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA---------DR 68
Query: 68 DGNGTIDFPEFLNLMAR 84
DG+G + EFL +M +
Sbjct: 69 DGDGEVSEQEFLRIMKK 85
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 18/160 (11%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
M D+I + F D D G ++ +E + + L QNP +Q
Sbjct: 10 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL------------VQR 56
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM- 119
+I+ D DGNG +DF EF+ +++ D E++L+ AFR++D D++G+IS EL V+
Sbjct: 57 VIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK 116
Query: 120 ----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
NL + + VD+ I AD DGDG+I++EEF V+
Sbjct: 117 MMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 156
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 18/160 (11%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
M D+I + F D D G ++ +E + + L QNP +Q
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL------------VQR 57
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
+I+ D DGNG +DF EF+ +++ D E++L+ AFR++D D++G+IS EL V+
Sbjct: 58 VIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK 117
Query: 121 NL-GEKLTDEE----VDEMIREADVDGDGQINYEEFVKVM 155
+ G L D + VD+ I AD DGDG+I++EEF V+
Sbjct: 118 MMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDA 67
D+I + F D D G ++ +E + + L QNP +Q +I+ D
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL------------VQRVIDIFDT 49
Query: 68 DGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNL 122
DGNG +DF EF+ +++ D E++L+ AFR++D D++G+IS EL V+ NL
Sbjct: 50 DGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 109
Query: 123 GEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+ + VD+ I AD DGDG+I++EEF V+
Sbjct: 110 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 142
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 18/153 (11%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDA 67
D+I + F D D G ++ +E + + L QNP +Q +I+ D
Sbjct: 4 DEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL------------VQRVIDIFDT 50
Query: 68 DGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKL 126
DGNG +DF EF+ +++ D E++L+ AFR++D D++G+IS EL V+ + G L
Sbjct: 51 DGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 110
Query: 127 TDEE----VDEMIREADVDGDGQINYEEFVKVM 155
D + VD+ I AD DGDG+I++EEF V+
Sbjct: 111 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 143
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+QLT++Q +EFK AF +F DGCI+TKELG V R LGQNPT ELQ+
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPT---------PEELQE 59
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKD 88
I+EVD DG+GT+DF EFL R KD
Sbjct: 60 XIDEVDEDGSGTVDFDEFLVXXVRCXKD 87
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 94 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E K AF +F ++G IS EL V LG+ T EE+ E I E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFL 78
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 84/152 (55%), Gaps = 14/152 (9%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
+L QI E KEAFS+ D D DG ++ +++ + LG+ P + EL M+ EA
Sbjct: 11 KLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP------ 64
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 123
G ++F FL++ + K+ TDSEE ++ AF +FD+ + ++ ++ ++ N+G
Sbjct: 65 -------GPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMG 117
Query: 124 EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+ +E+ +EA V+G G+ +Y +F ++
Sbjct: 118 DNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 148
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 83/152 (54%), Gaps = 14/152 (9%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
+L QI E KEAF++ D++ DG I +L + SLG+ P + EL M+ EA
Sbjct: 12 KLPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP------ 65
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 123
G ++F FL++ + K+ TDSEE ++ AF +FD+ ++ ++ ++ N+G
Sbjct: 66 -------GPLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMG 118
Query: 124 EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+ +E+ +EA V+G G+ +Y FV ++
Sbjct: 119 DNFNKDEMRMTFKEAPVEG-GKFDYVRFVAMI 149
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 83/151 (54%), Gaps = 14/151 (9%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L QI E KEAFS+ D D DG ++ +++ + LG+ P + EL M+ EA
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP------- 53
Query: 65 VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE 124
G ++F FL++ + K+ TDSEE ++ AF +FD+ + ++ ++ ++ N+G+
Sbjct: 54 ------GPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGD 107
Query: 125 KLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+E+ +EA V+G G+ +Y +F ++
Sbjct: 108 NFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 137
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 83/151 (54%), Gaps = 14/151 (9%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L QI E KEAFS+ D D DG ++ +++ + LG+ P + EL M+ EA
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP------- 53
Query: 65 VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE 124
G ++F FL++ + K+ TDSEE ++ AF +FD+ + ++ ++ ++ N+G+
Sbjct: 54 ------GPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGD 107
Query: 125 KLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+E+ +EA V+G G+ +Y +F ++
Sbjct: 108 NFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 137
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 9/82 (10%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
LT++Q E +EAF LFD DG G I KEL MR+LG P + E++ MI+E
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEP---------KKEEIKKMISE 74
Query: 65 VDADGNGTIDFPEFLNLMARKM 86
+D DG+GTIDF EFL +M KM
Sbjct: 75 IDKDGSGTIDFEEFLTMMTAKM 96
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 149
+ ++E++EAF +FD D +G I A EL+ M LG + EE+ +MI E D DG G I++E
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
Query: 150 EFVKVMMAK 158
EF+ +M AK
Sbjct: 87 EFLTMMTAK 95
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 57 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 116
E+++ + D DG+GTID E L + R + +EE+K+ DKD +G I E
Sbjct: 31 EIREAFDLFDTDGSGTIDAKE-LKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 89
Query: 117 HVMT 120
+MT
Sbjct: 90 TMMT 93
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDAD 68
QI E KEAFS+ D D DG ++ +++ + LG+ P + EL M+ EA
Sbjct: 2 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----------- 50
Query: 69 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD 128
G ++F FL++ + K+ TDSEE ++ AF +FD+ + ++ ++ ++ N+G+
Sbjct: 51 --GPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNK 108
Query: 129 EEVDEMIREADVDGDGQINYEEFVKVM 155
+E+ +EA V+G G+ +Y +F ++
Sbjct: 109 DEMRMTFKEAPVEG-GKFDYVKFTAMI 134
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDAD 68
QI E KEAFS+ D D DG ++ +++ + LG+ P + EL M+ EA
Sbjct: 4 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----------- 52
Query: 69 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD 128
G ++F FL++ + K+ TDSEE ++ AF +FD+ + ++ ++ ++ N+G+
Sbjct: 53 --GPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNK 110
Query: 129 EEVDEMIREADVDGDGQINYEEFVKVM 155
+E+ +EA V+G G+ +Y +F ++
Sbjct: 111 DEMRMTFKEAPVEG-GKFDYVKFTAMI 136
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 92/161 (57%), Gaps = 19/161 (11%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEAELQ 59
+A Q D + + K AF D++G G IT +L + RS P +L
Sbjct: 45 IAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDL---------- 94
Query: 60 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM 119
+++++D+DG+G ID+ EFL A + S++ + AFRVFD D +G I+ AEL HV+
Sbjct: 95 -LLDQIDSDGSGNIDYTEFL--AAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVL 151
Query: 120 TNLGEK--LTDEEVDE---MIREADVDGDGQINYEEFVKVM 155
N ++ +T+ +V++ MIRE D +GDG+I++ EF ++M
Sbjct: 152 FNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMM 192
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 93 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E+L+ AFR FD+D +G I+ ELR M LG+ L EE+D MIREADVD DG++NYEEF
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 153 KVM 155
+++
Sbjct: 66 RML 68
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
+ + + AF FD+DGDG IT EL M LGQ + + EL MI E D D
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQP---------LPQEELDAMIREADVDQ 55
Query: 70 NGTIDFPEFLNLMARK 85
+G +++ EF ++A++
Sbjct: 56 DGRVNYEEFARMLAQE 71
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 14/146 (9%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
+ E KEAF++ D++ DG I +L SLG+ P + EL M+ EA
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEAP------------ 48
Query: 70 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 129
G ++F FL++ + K+ TDSEE ++ AF +FD+D ++ ++ ++ N+G+ +
Sbjct: 49 -GPLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKD 107
Query: 130 EVDEMIREADVDGDGQINYEEFVKVM 155
E+ +EA V+G G+ +Y FV ++
Sbjct: 108 EMRMTFKEAPVEG-GKFDYVRFVAMI 132
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 90/161 (55%), Gaps = 19/161 (11%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEAELQ 59
+A Q D + + K F + D+DG G IT ++L + G + P +L
Sbjct: 42 IAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL---------- 91
Query: 60 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM 119
+++++D+DG+G ID+ EF+ A + S++ + AFRVFD D +G I+ AEL H++
Sbjct: 92 -LLDQIDSDGSGKIDYTEFI--AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHIL 148
Query: 120 TNLGEK--LTDEEVD---EMIREADVDGDGQINYEEFVKVM 155
N +K +T +V+ MIR+ D + DG+I++ EF ++M
Sbjct: 149 YNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMM 189
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 54/73 (73%)
Query: 83 ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 142
+KM + D++EE+ +AF++FD D+ G IS L+ V LGE LTDEE+ EMI EAD DG
Sbjct: 1 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 143 DGQINYEEFVKVM 155
DG+++ +EF+++M
Sbjct: 61 DGEVSEQEFLRIM 73
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDA 67
D E +AF LFD D G I+ K L V + LG+N T+ ELQ+MI+EA D
Sbjct: 8 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA---------DR 58
Query: 68 DGNGTIDFPEFLNLMAR 84
DG+G + EFL +M +
Sbjct: 59 DGDGEVSEQEFLRIMKK 75
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 14/152 (9%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
+L + E KEAF++ D++ DG I +L + SLG+ P + EL M+ EA
Sbjct: 16 RLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP------ 69
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 123
G ++F FL++ + K+ TDSEE ++ AF +FD+ ++ ++ ++ N+G
Sbjct: 70 -------GPLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMG 122
Query: 124 EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+ +E+ +EA V+G G+ +Y FV ++
Sbjct: 123 DNFNKDEMRMTFKEAPVEG-GKFDYVRFVAMI 153
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 14/152 (9%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
+L + E KEAF++ D++ DG I +L + SLG+ P + EL M+ EA
Sbjct: 16 RLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP------ 69
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 123
G ++F FL++ + K+ TDSEE ++ AF +FD+ ++ ++ ++ N+G
Sbjct: 70 -------GPLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMG 122
Query: 124 EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+ +E+ +EA V+G G+ +Y FV ++
Sbjct: 123 DNFNKDEMRMTFKEAPVEG-GKFDYVRFVAMI 153
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 9/79 (11%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
+ +D++ E +EAF +FD+DG+G I+ +ELGT MRSLG P NE EL+ +I
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMP---------NEVELEVIIQR 80
Query: 65 VDADGNGTIDFPEFLNLMA 83
+D DG+G +DF EF+ L+
Sbjct: 81 LDMDGDGQVDFEEFVTLLG 99
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%)
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 149
D EE++EAF+VFD+D NGFIS EL M +LG + E++ +I+ D+DGDGQ+++E
Sbjct: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 150 EFVKVM 155
EFV ++
Sbjct: 93 EFVTLL 98
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 86 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 145
M+D D E ELKEAFRV DK++ G I LR ++ +LG++LT++E++ MI E D DG G
Sbjct: 1 MEDLD-ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGT 59
Query: 146 INYEEFVKVMMA 157
++YEEF +MM+
Sbjct: 60 VDYEEFKCLMMS 71
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E KEAF + DK+ G I L +++SLG D + E E+++MI E D DG+G
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLG---------DELTEDEIENMIAETDTDGSG 58
Query: 72 TIDFPEFLNLM 82
T+D+ EF LM
Sbjct: 59 TVDYEEFKCLM 69
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEAELQDMINEVDA 67
+I +FKEAF++ D++ DG I +L ++G+ N EL MI EA
Sbjct: 5 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----------- 53
Query: 68 DGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT 127
+G I+F FL + K+K D E+ + AF+V D D G I + L ++T G + T
Sbjct: 54 --SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFT 111
Query: 128 DEEVDEMIREADVDGDGQINYEEFVKVM 155
EE+ M D G ++Y+ V+
Sbjct: 112 PEEIKNMWAAFPPDVAGNVDYKNICYVI 139
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 93 EELKEAFRVFDKDQNGFISAAELRHVMTNLGE-KLTDEEVDEMIREADVDGDGQINYEEF 151
E+ KEAF V D++ +G I +LR +G + +EE+D MI+EA G IN+ F
Sbjct: 7 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVF 62
Query: 152 VKVMMAK 158
+ + K
Sbjct: 63 LTMFGEK 69
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEAELQDMINEVDA 67
+I +FKEAF++ D++ DG I +L ++G+ N EL MI EA
Sbjct: 23 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----------- 71
Query: 68 DGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT 127
+G I+F FL + K+K D E+ + AF+V D D G I + L ++T G + T
Sbjct: 72 --SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFT 129
Query: 128 DEEVDEMIREADVDGDGQINYEEFVKVM 155
EE+ M D G ++Y+ V+
Sbjct: 130 PEEIKNMWAAFPPDVAGNVDYKNICYVI 157
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEAELQDMINEVDA 67
QI +FKEAF++ D++ DG I +L ++G+ N EL MI EA
Sbjct: 10 QIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----------- 58
Query: 68 DGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT 127
+G I+F FL + K+K D E+ + AF+V D D G I + L ++T ++ T
Sbjct: 59 --SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFT 116
Query: 128 DEEVDEMIREADVDGDGQINYEEFVKVM 155
EE+ M D G ++Y+ V+
Sbjct: 117 PEEIKNMWAAFPPDVAGNVDYKNICYVI 144
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 86 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE-KLTDEEVDEMIREADVDGDG 144
M D ++ KEAF V D++++G I +LR +G + +EE+D MI+EA G
Sbjct: 5 MFDQTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SG 60
Query: 145 QINYEEFV 152
IN+ F+
Sbjct: 61 PINFTVFL 68
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 9/83 (10%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
+LT++Q E +EAF LFD DG G I KEL MR+LG P + E++ MI+
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEP---------KKEEIKKMIS 74
Query: 64 EVDADGNGTIDFPEFLNLMARKM 86
E+D +G G ++F +FL +M +KM
Sbjct: 75 EIDKEGTGKMNFGDFLTVMTQKM 97
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 149
+ ++E++EAF +FD D G I EL+ M LG + EE+ +MI E D +G G++N+
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 87
Query: 150 EFVKVMMAK 158
+F+ VM K
Sbjct: 88 DFLTVMTQK 96
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 57 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 116
E+++ + DADG GTID E L + R + +EE+K+ DK+ G ++ +
Sbjct: 32 EIREAFDLFDADGTGTIDVKE-LKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 90
Query: 117 HVMT 120
VMT
Sbjct: 91 TVMT 94
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 48/60 (80%)
Query: 93 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E+ +AF+VFDK+ G +S +LR+++T LGEKLTD EVDE+++ +VD +G+I+Y++F+
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 64
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
+F +AF +FDK+ G ++ +L ++ LG+ T+AE+ +++ E+ D NG
Sbjct: 6 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEV---------DSNG 56
Query: 72 TIDFPEFLNLMARK 85
ID+ +F+ + R+
Sbjct: 57 EIDYKKFIEDVLRQ 70
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%)
Query: 92 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 151
++EL+EAFR++DK+ NG+IS +R ++ L E L+ E++D MI E D DG G +++EEF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 152 VKVM 155
+ VM
Sbjct: 62 MGVM 65
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 9/72 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E +EAF L+DK+G+G I+T VMR + AEL + ++ +L MI+E+DADG+G
Sbjct: 4 ELREAFRLYDKEGNGYISTD----VMREI-----LAELDETLSSEDLDAMIDEIDADGSG 54
Query: 72 TIDFPEFLNLMA 83
T+DF EF+ +M
Sbjct: 55 TVDFEEFMGVMT 66
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 89/150 (59%), Gaps = 16/150 (10%)
Query: 12 EFKEAFSLFDKDGDGCITTKEL---GTVMRSLGQNPTEAELQDMIN-EAELQDMINEVDA 67
E + F DK+GDG + KEL V+R+ + EL ++ N E E+ +++ EVD
Sbjct: 356 ELTDIFKKLDKNGDGQLDKKELIEGYNVLRNF-----KNELGELKNVEEEVDNILKEVDF 410
Query: 68 DGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHV--MTNLGEK 125
D NG I++ EF+++ K + SEE L+ AF +FD D++G I+ EL ++ +T++ EK
Sbjct: 411 DKNGYIEYSEFISVCMDK-QILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEK 469
Query: 126 LTDEEVDEMIREADVDGDGQINYEEFVKVM 155
++ ++ EAD + D I+++EFV +M
Sbjct: 470 TWND----VLGEADQNKDNMIDFDEFVSMM 495
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 81 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL-------RHVMTNLGE-KLTDEEVD 132
+ K+ + +EL + F+ DK+ +G + EL R+ LGE K +EEVD
Sbjct: 343 FIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVD 402
Query: 133 EMIREADVDGDGQINYEEFVKVMMAK 158
+++E D D +G I Y EF+ V M K
Sbjct: 403 NILKEVDFDKNGYIEYSEFISVCMDK 428
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 47 AELQDMINEAELQDMINEVDADGNGTIDFPEFL---NLMARKMKD-----TDSEEELKEA 98
++L + EL D+ ++D +G+G +D E + N++ R K+ + EEE+
Sbjct: 346 SKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVL-RNFKNELGELKNVEEEVDNI 404
Query: 99 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+ D D+NG+I +E V + ++E + D D G+I EE +
Sbjct: 405 LKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLF 461
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
LT ++ E+KEAF LFDKD D +T +ELGTVMR+LG NPT + ++ +++ +
Sbjct: 8 LTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPT---------KQKISEIVKD 58
Query: 65 VDADGNGTIDFPEFLNLMARKMKDTDS 91
D D +G D FL +M ++ DS
Sbjct: 59 YDKDNSGKFDQETFLTIMLEYGQEVDS 85
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 84 RKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGD 143
+K+ + ++E KEAF++FDKD + ++A EL VM LG T +++ E++++ D D
Sbjct: 5 KKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNS 64
Query: 144 GQINYEEFVKVMM 156
G+ + E F+ +M+
Sbjct: 65 GKFDQETFLTIML 77
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+A L D +I+ + F D D G ++++E+ ++ +G ++ ++ +
Sbjct: 47 IAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRD----- 101
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
+D++ +G I + +FL K E L F+ FD D NG IS EL+ +
Sbjct: 102 ----IDSNASGQIHYTDFLAATIDKQTYLKKEVCLI-PFKFFDIDGNGKISVEELKRIFG 156
Query: 121 --NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 158
++ L D+ +D +++E D++GDG+I++ EF+ +MM+K
Sbjct: 157 RDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFM-LMMSK 195
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 79 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 138
L ++A+ + D + L+ F D D +G +S+ E+ + +G + ++ +++R+
Sbjct: 44 LTIIAKHLCDVEINN-LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDI 102
Query: 139 DVDGDGQINYEEFVKVMMAK 158
D + GQI+Y +F+ + K
Sbjct: 103 DSNASGQIHYTDFLAATIDK 122
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 48/66 (72%)
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 149
DS EE+ +AFR+FD D +G I+ +LR V LGE LT+EE+ EMI EAD + D +I+ +
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65
Query: 150 EFVKVM 155
EF+++M
Sbjct: 66 EFIRIM 71
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDA 67
D E +AF LFD D G IT K+L V + LG+N TE ELQ+MI EA+ D NE+D
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDD-NEIDE 64
Query: 68 DGNGTIDFPEFLNLMAR 84
D EF+ +M +
Sbjct: 65 D--------EFIRIMKK 73
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 12/162 (7%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKEL----GTVMRSLGQNPTEAELQDMINE 55
M +LT D+ E F DK+GDG + EL +MR GQ+ + + + E
Sbjct: 324 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV--E 381
Query: 56 AELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL 115
E+ +++ VD D NG I++ EF+ + A K S E L+ AFR+FD D +G IS+ EL
Sbjct: 382 HEVDQVLDAVDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTEL 440
Query: 116 RHVMTNLGEKLTDEEV-DEMIREADVDGDGQINYEEFVKVMM 156
T G D E ++ E D + DG+++++EF ++++
Sbjct: 441 ---ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 15 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTID 74
AF +FD D G I++ EL T+ G + ++E + +++EVD + +G +D
Sbjct: 422 RAFRMFDSDNSGKISSTELATI---FGVSDVDSE--------TWKSVLSEVDKNNDGEVD 470
Query: 75 FPEFLNLMAR 84
F EF ++ +
Sbjct: 471 FDEFQQMLLK 480
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 12/162 (7%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKEL----GTVMRSLGQNPTEAELQDMINE 55
M +LT D+ E F DK+GDG + EL +MR GQ+ + + + E
Sbjct: 347 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV--E 404
Query: 56 AELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL 115
E+ +++ VD D NG I++ EF+ + A K S E L+ AFR+FD D +G IS+ EL
Sbjct: 405 HEVDQVLDAVDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTEL 463
Query: 116 RHVMTNLGEKLTDEEV-DEMIREADVDGDGQINYEEFVKVMM 156
T G D E ++ E D + DG+++++EF ++++
Sbjct: 464 ---ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 502
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
+ AF +FD D G I++ EL T+ G + ++E + +++EVD + +G
Sbjct: 442 RLERAFRMFDSDNSGKISSTELATI---FGVSDVDSE--------TWKSVLSEVDKNNDG 490
Query: 72 TIDFPEFLNLMAR 84
+DF EF ++ +
Sbjct: 491 EVDFDEFQQMLLK 503
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 12/162 (7%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKEL----GTVMRSLGQNPTEAELQDMINE 55
M +LT D+ E F DK+GDG + EL +MR GQ+ + + + E
Sbjct: 348 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV--E 405
Query: 56 AELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL 115
E+ +++ VD D NG I++ EF+ + A K S E L+ AFR+FD D +G IS+ EL
Sbjct: 406 HEVDQVLDAVDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTEL 464
Query: 116 RHVMTNLGEKLTDEEV-DEMIREADVDGDGQINYEEFVKVMM 156
T G D E ++ E D + DG+++++EF ++++
Sbjct: 465 ---ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 503
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
+ AF +FD D G I++ EL T+ G + ++E + +++EVD + +G
Sbjct: 443 RLERAFRMFDSDNSGKISSTELATI---FGVSDVDSE--------TWKSVLSEVDKNNDG 491
Query: 72 TIDFPEFLNLMAR 84
+DF EF ++ +
Sbjct: 492 EVDFDEFQQMLLK 504
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.1 bits (157), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKEL----GTVMRSLGQNPTEAELQDMINEAELQDM 61
+ D+ E F DK+GDG + EL + R GQ+ + + + E E+ +
Sbjct: 330 SQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAV--EHEVDQV 387
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
++ VD D NG I++ EF+ + A K S E L+ AFR FD D +G IS+ EL T
Sbjct: 388 LDAVDFDKNGYIEYSEFVTV-AXDRKTLLSRERLERAFRXFDSDNSGKISSTEL---ATI 443
Query: 122 LGEKLTDEEV-DEMIREADVDGDGQINYEEFVKVMM 156
G D E ++ E D + DG+++++EF + ++
Sbjct: 444 FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXLL 479
Score = 33.5 bits (75), Expect = 0.047, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 85 KMKDTDSEEELKEAFRVFDKDQNGFISAAEL-----------RHVMTNLGEKLTDEEVDE 133
K+ D +EL F DK+ +G + AEL + L + EVD+
Sbjct: 327 KLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQ 386
Query: 134 MIREADVDGDGQINYEEFVKV 154
++ D D +G I Y EFV V
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTV 407
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 6/158 (3%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP--TEAELQDMINEAE 57
M +LT ++ E + F D +GDG + KEL R L Q T ++L EAE
Sbjct: 29 MGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAE 88
Query: 58 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 117
+ ++ VD D NG I++ EF+ + K + S E L AF+ FD D +G I+ EL
Sbjct: 89 VDHILQSVDFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITNEELGR 147
Query: 118 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+ ++ DE ++++E D + DG++++EEFV++M
Sbjct: 148 LFGV--TEVDDETWHQVLQECDKNNDGEVDFEEFVEMM 183
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 81 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL----RHVMTNLGEKLTD-------E 129
M K+ + +EL + FR D + +G + EL R +M G+ ++D
Sbjct: 28 FMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEA 87
Query: 130 EVDEMIREADVDGDGQINYEEFVKVMMAK 158
EVD +++ D D +G I Y EFV V M K
Sbjct: 88 EVDHILQSVDFDRNGYIEYSEFVTVCMDK 116
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDF 75
AF FD DG G IT +ELG + TE +++ ++ E D + +G +DF
Sbjct: 128 AFQQFDSDGSGKITNEELGRLF-----GVTE------VDDETWHQVLQECDKNNDGEVDF 176
Query: 76 PEFLNLMAR 84
EF+ +M +
Sbjct: 177 EEFVEMMQK 185
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 6/158 (3%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP--TEAELQDMINEAE 57
M +LT ++ E + F D +GDG + KEL R L Q T ++L EAE
Sbjct: 303 MGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAE 362
Query: 58 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 117
+ ++ VD D NG I++ EF+ + K + S E L AF+ FD D +G I+ EL
Sbjct: 363 VDHILQSVDFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITNEELGR 421
Query: 118 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+ ++ DE ++++E D + DG++++EEFV++M
Sbjct: 422 LFGV--TEVDDETWHQVLQECDKNNDGEVDFEEFVEMM 457
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 81 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL----RHVMTNLGEKLTD-------E 129
M K+ + +EL + FR D + +G + EL R +M G+ ++D
Sbjct: 302 FMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEA 361
Query: 130 EVDEMIREADVDGDGQINYEEFVKVMMAK 158
EVD +++ D D +G I Y EFV V M K
Sbjct: 362 EVDHILQSVDFDRNGYIEYSEFVTVCMDK 390
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDF 75
AF FD DG G IT +ELG + TE +++ ++ E D + +G +DF
Sbjct: 402 AFQQFDSDGSGKITNEELGRLF-----GVTE------VDDETWHQVLQECDKNNDGEVDF 450
Query: 76 PEFLNLMAR 84
EF+ +M +
Sbjct: 451 EEFVEMMQK 459
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAELQDMINEAEL 58
MA +LT ++ E + F DK+GDG + +EL L G+ +L + E+E+
Sbjct: 335 MASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQI--ESEV 392
Query: 59 QDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHV 118
++ D D NG ID+ EF+ + A K S+++L+ AF+ FD+D NG IS EL V
Sbjct: 393 DAILGAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV 451
Query: 119 MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+ L + EMI D + DG +++EEF K++
Sbjct: 452 FGL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 486
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 79 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLT-------DEE 130
L MA K+ + +EL + FR DK+ +G + EL + L GE++ + E
Sbjct: 332 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 391
Query: 131 VDEMIREADVDGDGQINYEEFVKVMM 156
VD ++ AD D +G I+Y EFV V M
Sbjct: 392 VDAILGAADFDRNGYIDYSEFVTVAM 417
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
+ + AF FD+DG+G I+ EL +V D + ++MI+ +D++ +G
Sbjct: 427 KLESAFQKFDQDGNGKISVDELASVFG-----------LDHLESKTWKEMISGIDSNNDG 475
Query: 72 TIDFPEFLNLMAR 84
+DF EF ++ +
Sbjct: 476 DVDFEEFCKMIQK 488
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 97 EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E R F Q ++ A L ++ + L + +E+ ++ R D +GDGQ++ +E +
Sbjct: 316 ENMRKFQNSQK--LAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELI 369
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAELQDMINEAEL 58
MA +LT ++ E + F DK+GDG + +EL L G+ +L + E+E+
Sbjct: 52 MASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQI--ESEV 109
Query: 59 QDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHV 118
++ D D NG ID+ EF+ + A K S+++L+ AF+ FD+D NG IS EL V
Sbjct: 110 DAILGAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV 168
Query: 119 MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+ L + EMI D + DG +++EEF K++
Sbjct: 169 FGL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 203
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 79 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLT-------DEE 130
L MA K+ + +EL + FR DK+ +G + EL + L GE++ + E
Sbjct: 49 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 108
Query: 131 VDEMIREADVDGDGQINYEEFVKVMM 156
VD ++ AD D +G I+Y EFV V M
Sbjct: 109 VDAILGAADFDRNGYIDYSEFVTVAM 134
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
+ + AF FD+DG+G I+ EL +V D + ++MI+ +D++ +G
Sbjct: 144 KLESAFQKFDQDGNGKISVDELASVFG-----------LDHLESKTWKEMISGIDSNNDG 192
Query: 72 TIDFPEFLNLMAR 84
+DF EF ++ +
Sbjct: 193 DVDFEEFCKMIQK 205
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 97 EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E R F Q ++ A L ++ + L + +E+ ++ R D +GDGQ++ +E +
Sbjct: 33 ENMRKFQNSQK--LAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELI 86
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 82 MARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 138
M R MKD +EEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++
Sbjct: 1 MVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 60
Query: 139 DVDGDGQINYEEFVKVM 155
D + DG+I+Y+EF++ M
Sbjct: 61 DKNNDGRIDYDEFLEFM 77
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E + F +FDK+ DG I +EL ++++ G+ TE ++++++ + D + +G
Sbjct: 16 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG---------DKNNDG 66
Query: 72 TIDFPEFLNLM 82
ID+ EFL M
Sbjct: 67 RIDYDEFLEFM 77
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 49/65 (75%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 150
SEEEL FR+FDK+ +GFI EL ++ GE + +E+++++++++D + DG+I+++E
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 151 FVKVM 155
F+K+M
Sbjct: 68 FLKMM 72
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E F +FDK+ DG I +ELG ++R+ G++ E +++D++ ++ D + +G
Sbjct: 11 ELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDS---------DKNNDG 61
Query: 72 TIDFPEFLNLM 82
IDF EFL +M
Sbjct: 62 RIDFDEFLKMM 72
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+++Q E KEAF LFD + G I EL MR+LG + + + E+ +++NE
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFD---------VKKPEILELMNE 51
Query: 65 VDADGNGTIDFPEFLNLMARKMKDTD 90
D +GNG I F +FL++M K+K+ D
Sbjct: 52 YDREGNGYIGFDDFLDIMTEKIKNRD 77
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 149
+ ++E+KEAF +FD ++ G I EL+ M LG + E+ E++ E D +G+G I ++
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63
Query: 150 EFVKVMMAK 158
+F+ +M K
Sbjct: 64 DFLDIMTEK 72
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 93 EELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADVDGDGQINYEEF 151
+EL++AFR FD + +G IS +ELR M L G ++ +++E+IR+ D++GDG++++EEF
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 152 VKVM 155
V++M
Sbjct: 67 VRMM 70
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
+ E ++AF FD +GDG I+T EL MR L L + +++++I +VD +G
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKL--------LGHQVGHRDIEEIIRDVDLNG 57
Query: 70 NGTIDFPEFLNLMAR 84
+G +DF EF+ +M+R
Sbjct: 58 DGRVDFEEFVRMMSR 72
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 50/65 (76%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 150
SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+E
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 151 FVKVM 155
F++ M
Sbjct: 63 FLEFM 67
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E + F +FDK+ DG I +EL ++++ G+ TE ++++++ + D + +G
Sbjct: 6 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG---------DKNNDG 56
Query: 72 TIDFPEFLNLM 82
ID+ EFL M
Sbjct: 57 RIDYDEFLEFM 67
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 50/65 (76%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 150
SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+E
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 151 FVKVM 155
F++ M
Sbjct: 65 FLEFM 69
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E + F +FDK+ DG I +EL ++++ G+ TE ++++++ + D + +G
Sbjct: 8 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG---------DKNNDG 58
Query: 72 TIDFPEFLNLM 82
ID+ EFL M
Sbjct: 59 RIDYDEFLEFM 69
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 50/65 (76%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 150
SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+E
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 151 FVKVM 155
F++ M
Sbjct: 64 FLEFM 68
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E + F +FDK+ DG I EL ++++ G+ TE ++++++ + D + +G
Sbjct: 7 ELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDG---------DKNNDG 57
Query: 72 TIDFPEFLNLM 82
ID+ EFL M
Sbjct: 58 RIDYDEFLEFM 68
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGN 70
S F DKD G I+ EL + + P N ++ +I+ D +
Sbjct: 4 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTP--------FNPVTVRSIISMFDRENK 55
Query: 71 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 130
++F EF + + + D + FR +D+D +G I EL+ ++ G +L+D+
Sbjct: 56 AGVNFSEFTGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQF 108
Query: 131 VDEMIREADVDGDGQINYEEFVK 153
D +IR+ D G GQI +++F++
Sbjct: 109 HDILIRKFDRQGRGQIAFDDFIQ 131
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
I++++ F +D+D G I EL + G L D ++ +I + D G
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFG-----YRLSDQFHDI----LIRKFDRQG 120
Query: 70 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 113
G I F +F+ + + L + FR +D DQ+G+I +
Sbjct: 121 RGQIAFDDFI-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 157
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 15/143 (10%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGN 70
S F DKD G I+ EL + + P N ++ +I+ D +
Sbjct: 26 SFLWNVFQRVDKDRSGVISDNELQQALSNGTWTP--------FNPVTVRSIISMFDRENK 77
Query: 71 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 130
++F EF + + + FR +D+D +G I EL+ ++ G +L+D+
Sbjct: 78 AGVNFSEFTGVWK-------YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQF 130
Query: 131 VDEMIREADVDGDGQINYEEFVK 153
D +IR+ D G GQI +++F++
Sbjct: 131 HDILIRKFDRQGRGQIAFDDFIQ 153
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
I++++ F +D+D G I EL + G L D ++ +I + D G
Sbjct: 92 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFG-----YRLSDQFHDI----LIRKFDRQG 142
Query: 70 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 113
G I F +F+ + + L + FR +D DQ+G+I +
Sbjct: 143 RGQIAFDDFI-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 179
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGN 70
S F DKD G I+ EL + + P N ++ +I+ D +
Sbjct: 7 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTP--------FNPVTVRSIISMFDRENK 58
Query: 71 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 130
++F EF + + + D + FR +D+D +G I EL+ ++ G +L+D+
Sbjct: 59 AGVNFSEFTGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQF 111
Query: 131 VDEMIREADVDGDGQINYEEFVK 153
D +IR+ D G GQI +++F++
Sbjct: 112 HDILIRKFDRQGRGQIAFDDFIQ 134
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
I++++ F +D+D G I EL + G L D ++ +I + D G
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFG-----YRLSDQFHDI----LIRKFDRQG 123
Query: 70 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 113
G I F +F+ + + L + FR +D DQ+G+I +
Sbjct: 124 RGQIAFDDFI-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 160
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 15/138 (10%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDF 75
F DKD G I+ EL + + P N ++ +I+ D + ++F
Sbjct: 30 VFQRVDKDRSGVISDTELQQALSNGTWTP--------FNPVTVRSIISMFDRENKAGVNF 81
Query: 76 PEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI 135
EF + + + D + FR +D+D +G I EL+ ++ G +L+D+ D +I
Sbjct: 82 SEFTGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILI 134
Query: 136 READVDGDGQINYEEFVK 153
R+ D G GQI +++F++
Sbjct: 135 RKFDRQGRGQIAFDDFIQ 152
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
I++++ F +D+D G I EL + G L D ++ +I + D G
Sbjct: 91 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFG-----YRLSDQFHDI----LIRKFDRQG 141
Query: 70 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 113
G I F +F+ + + L + FR +D DQ+G+I +
Sbjct: 142 RGQIAFDDFI-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 178
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGN 70
S F DKD G I+ EL + + P N ++ +I+ D +
Sbjct: 3 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTP--------FNPVTVRSIISMFDRENK 54
Query: 71 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 130
++F EF + + + D + FR +D+D +G I EL+ ++ G +L+D+
Sbjct: 55 AGVNFSEFTGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQF 107
Query: 131 VDEMIREADVDGDGQINYEEFVK 153
D +IR+ D G GQI +++F++
Sbjct: 108 HDILIRKFDRQGRGQIAFDDFIQ 130
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
I++++ F +D+D G I EL + G L D ++ +I + D G
Sbjct: 69 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFG-----YRLSDQFHDI----LIRKFDRQG 119
Query: 70 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 113
G I F +F+ + + L + FR +D DQ+G+I +
Sbjct: 120 RGQIAFDDFI-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 156
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 23/169 (13%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKEL-----------GTVMRSLGQNPTEAE 48
MA +LT D+ + E F D + DG + EL G SL QN +
Sbjct: 320 MASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEG-ST 378
Query: 49 LQDMINEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD--SEEELKEAFRVFDKDQ 106
++D I+ ++ +D DG+G+I++ EF+ A + T S E ++ AF++FDKD
Sbjct: 379 IEDQID-----SLMPLLDMDGSGSIEYSEFI---ASAIDRTILLSRERMERAFKMFDKDG 430
Query: 107 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+G IS EL + + + EE++ +I + D + DG++++ EFV+++
Sbjct: 431 SGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 50/65 (76%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 150
+EEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+E
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 151 FVKVM 155
F++ M
Sbjct: 68 FLEFM 72
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
E + F +FDK+ DG I +EL ++++ G+ TE ++++++ + D + +G
Sbjct: 11 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG---------DKNNDG 61
Query: 72 TIDFPEFLNLM 82
ID+ EFL M
Sbjct: 62 RIDYDEFLEFM 72
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGN 70
S F DKD G I+ EL + + P N ++ +I+ D +
Sbjct: 7 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTP--------FNPVTVRSIISMFDRENK 58
Query: 71 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 130
++F EF + + + D + FR +D+D +G I EL+ ++ G +L+D+
Sbjct: 59 AGVNFSEFTGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQF 111
Query: 131 VDEMIREADVDGDGQINYEEFVK 153
D +IR+ D G GQI +++F++
Sbjct: 112 HDILIRKFDRQGRGQIAFDDFIQ 134
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
I++++ F +D+D G I EL + G L D ++ +I + D G
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGAG-----YRLSDQFHDI----LIRKFDRQG 123
Query: 70 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 113
G I F +F+ + + L + FR +D DQ+G+I +
Sbjct: 124 RGQIAFDDFI-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 160
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 17/139 (12%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDFP 76
F D +GDG ++ +E+ + S + P + NE LQ + +D DGNG ID
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSS--KRPIK-------NEQLLQLIFKAIDIDGNGEIDLA 56
Query: 77 EFLNLMARKMKDTDSEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 133
EF A +K+ D +E LK +++ D D +G ++ E +T +K E+V +
Sbjct: 57 EFTKFAAA-VKEQDLSDEKVGLKILYKLMDADGDGKLTKEE----VTTFFKKFGYEKVVD 111
Query: 134 MIREADVDGDGQINYEEFV 152
I +AD +GDG I EEF+
Sbjct: 112 QIMKADANGDGYITLEEFL 130
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 14/75 (18%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+D+++ K + L D DGDG +T +E+ T + G ++ D I +
Sbjct: 70 LSDEKVG-LKILYKLMDADGDGKLTKEEVTTFFKKFGYE-------------KVVDQIMK 115
Query: 65 VDADGNGTIDFPEFL 79
DA+G+G I EFL
Sbjct: 116 ADANGDGYITLEEFL 130
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 99 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA-DVDGDGQINYEEFVKVMMA 157
F+ D + +G +S E++ +++ + +E++ ++I +A D+DG+G+I+ EF K A
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSS-KRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 71 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLT 127
GT D+ F +L+ K K ++ ++KE F + DKDQ+GFI EL+ V+ G L
Sbjct: 22 GTFDYKRFFHLVGLKGK---TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN 78
Query: 128 DEEVDEMIREADVDGDGQINYEEFVKVM 155
D E ++ D D DG+I +EF K++
Sbjct: 79 DTETKALLAAGDSDHDGKIGADEFAKMV 106
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEV 65
TD Q+ KE F + DKD G I +EL V++ + + +N+ E + ++
Sbjct: 39 TDAQV---KEVFEILDKDQSGFIEEEELKGVLKGFSAHGRD------LNDTETKALLAAG 89
Query: 66 DADGNGTIDFPEFLNLMAR 84
D+D +G I EF ++A+
Sbjct: 90 DSDHDGKIGADEFAKMVAQ 108
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 65/115 (56%), Gaps = 10/115 (8%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
A ++ +Q++EF+ +F+ FD+ G + ++ + S+G N + EAE +
Sbjct: 716 AKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYN---------MGEAEFARI 766
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 116
++ VD + G + F F++ M+R+ DTD+ +++ +F++ D+N +I+ ELR
Sbjct: 767 MSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKN-YITVDELR 820
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L ++I E +EAF FDKD DG I ++LG MR++G PTE EL EL IN
Sbjct: 4 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMEL------IELSQQIN- 56
Query: 65 VDADGNGTIDFPEFLNLMARKM 86
+ G +DF +F+ LM K+
Sbjct: 57 --MNLGGHVDFDDFVELMGPKL 76
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 47/66 (71%)
Query: 93 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
EEL+EAFR FDKD++G+I+ +L + M +G T+ E+ E+ ++ +++ G +++++FV
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 69
Query: 153 KVMMAK 158
++M K
Sbjct: 70 ELMGPK 75
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDF 75
AF +FD +GDG I E +M+ +G+ P + +AE+++ + E D DGNG ID
Sbjct: 13 AFKVFDANGDGVIDFDEFKFIMQKVGEEP--------LTDAEVEEAMKEADEDGNGVIDI 64
Query: 76 PEFLNLMAR 84
PEF++L+ +
Sbjct: 65 PEFMDLIKK 73
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK-LTDEEVDEMIREADVDGDGQINY 148
D EEE+ AF+VFD + +G I E + +M +GE+ LTD EV+E ++EAD DG+G I+
Sbjct: 5 DDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDI 64
Query: 149 EEFVKVM 155
EF+ ++
Sbjct: 65 PEFMDLI 71
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 66 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL 115
DA+G+G IDF EF +M + ++ ++ E++EA + D+D NG I E
Sbjct: 18 DANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 60/107 (56%), Gaps = 13/107 (12%)
Query: 59 QDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHV 118
+ + DA+G+GTIDF EF+ ++ + E++LK AF ++D D NG+IS AE+ +
Sbjct: 66 EHVFRTFDANGDGTIDFREFIIALSVTSRG-KLEQKLKWAFSMYDLDGNGYISKAEMLEI 124
Query: 119 MTNLG------------EKLTDEEVDEMIREADVDGDGQINYEEFVK 153
+ + E ++ +++ R+ D + DG+++ EEF++
Sbjct: 125 VQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 171
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 91 SEEELKEAFRVFDKD-QNGFISAAELRHVMTNLGEKLTDEEVDEMI-READVDGDGQINY 148
+E E++E ++ F +D +G +S E + + N + E + R D +GDG I++
Sbjct: 23 TEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDF 82
Query: 149 EEFV 152
EF+
Sbjct: 83 REFI 86
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 49 LQDMI-----NEAELQDMINEVDAD-GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 102
+QD++ E E+Q+ D +G + EF + D+ + + FR F
Sbjct: 13 MQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTF 72
Query: 103 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
D + +G I E ++ ++++ D+DG+G I+ E ++++ A
Sbjct: 73 DANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 127
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/72 (20%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQ---NPTEAELQDMINEAELQDMINEVDAD 68
+ K AFS++D DG+G I+ E+ +++++ + + + + E + + ++D +
Sbjct: 100 KLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTN 159
Query: 69 GNGTIDFPEFLN 80
+G + EF+
Sbjct: 160 RDGKLSLEEFIR 171
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 34/165 (20%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNG 71
F D++ G ++ +L + +L NP L D I E+ DG+
Sbjct: 30 RLHHRFRALDRNKKGYLSRMDLQQIG-ALAVNP----LGDRIIESFF--------PDGSQ 76
Query: 72 TIDFPEFLNLMA--RKMKDTDSEEE--------------LKEAFRVFDKDQNGFISAAEL 115
+DFP F+ ++A R ++D D+E + L AF+++D D++G IS E+
Sbjct: 77 RVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEM 136
Query: 116 RHVMT-NLGEKLTDEEV----DEMIREADVDGDGQINYEEFVKVM 155
V+ +G ++T+E++ D ++EAD DGDG +++ EF K +
Sbjct: 137 LQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGN 70
S F DKD G I+ EL + + P N ++ +I+ D +
Sbjct: 4 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTP--------FNPVTVRSIISMFDRENK 55
Query: 71 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 130
++F EF + + + D + FR +D+D +G I EL+ ++ G +L+D+
Sbjct: 56 AGVNFSEFTGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQF 106
Query: 131 VDEMIREADVDGDGQINYEEFVK 153
D +IR+ D G GQI +++F++
Sbjct: 107 HDILIRKFDRQGRGQIAFDDFIQ 129
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
I++++ F +D+D G I EL Q + L D ++ +I + D G
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELK-------QALSGYRLSDQFHDI----LIRKFDRQG 118
Query: 70 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 113
G I F +F+ + + L + FR +D DQ+G+I +
Sbjct: 119 RGQIAFDDFI-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 155
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 33/171 (19%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
+ QI+ F+ DK +G ++ ++ + L NP L D I IN
Sbjct: 23 FSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINP----LGDRI--------INA 69
Query: 65 VDADGNGTIDFPEFLNLMAR--------KMKDTDSEEELKE-------AFRVFDKDQNGF 109
++G ++F F+ +A K KD + E L AFR++D D++
Sbjct: 70 FFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDK 129
Query: 110 ISAAELRHVMTNL-GEKLTDEEV----DEMIREADVDGDGQINYEEFVKVM 155
IS EL V+ + G ++DE++ D I+EAD DGD I++ EFVKV+
Sbjct: 130 ISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 18/112 (16%)
Query: 58 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 117
++ M D +G+ TIDF E++ + ++ T E +LK F+++DKD+NG I EL
Sbjct: 61 VEAMFRAFDTNGDNTIDFLEYVAALNLVLRGT-LEHKLKWTFKIYDKDRNGCIDRQELLD 119
Query: 118 VMTNL----------------GEKLTDEE-VDEMIREADVDGDGQINYEEFV 152
++ ++ G+ LT EE VD + D +GDGQ++ EFV
Sbjct: 120 IVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFV 171
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP------TEAELQ-DMINEAELQDMIN- 63
+ K F ++DKD +GCI +EL ++ S+ + EAE Q ++ E+ D I
Sbjct: 96 KLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFL 155
Query: 64 EVDADGNGTIDFPEFL 79
VD +G+G + EF+
Sbjct: 156 LVDENGDGQLSLNEFV 171
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 33/171 (19%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
+ QI+ F+ DK +G ++ ++ + L NP L D I IN
Sbjct: 23 FSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINP----LGDRI--------INA 69
Query: 65 VDADGNGTIDFPEFLNLMAR--------KMKDTDSEEELKE-------AFRVFDKDQNGF 109
+G ++F F+ +A K KD + E L AFR++D D++
Sbjct: 70 FFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEK 129
Query: 110 ISAAELRHVMTNL-GEKLTDEEV----DEMIREADVDGDGQINYEEFVKVM 155
IS EL V+ + G ++DE++ D I+EAD DGD I++ EFVKV+
Sbjct: 130 ISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 50 QDMINEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGF 109
+D++ +++ ++ V A+G + + +F L+ K S ++K+ F+ D D +GF
Sbjct: 4 KDLLKADDIKKALDAVKAEG--SFNHKKFFALVGLKAM---SANDVKKVFKAIDADASGF 58
Query: 110 ISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQINYEEF 151
I EL+ V+ + G LTD E ++ AD DGDG+I +EF
Sbjct: 59 IEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 103
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTI 73
K+ F D D G I +EL V++S + + + +AE + + D DG+G I
Sbjct: 45 KKVFKAIDADASGFIEEEELKFVLKSFAADGRD------LTDAETKAFLKAADKDGDGKI 98
Query: 74 DFPEFLNLM 82
EF L+
Sbjct: 99 GIDEFETLV 107
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGN 70
S+F E + FD DG G + KEL +++ L Q +A L+ D + D
Sbjct: 16 SQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKI 75
Query: 71 GTIDFPEFLN-----LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK 125
G ++ L L+ + + S EE + +R +D D +GFI EL++ + +L EK
Sbjct: 76 GIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEK 135
Query: 126 LTD--------EEVDEMIREADVDGDGQINYEEFVKVM 155
E D M++ D + DG++ E +++
Sbjct: 136 ANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 173
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD-MINEVDADGN 70
EF + + +D D G I T+EL ++ L + + D AE D M+ D++ +
Sbjct: 104 EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKT--VDDTKLAEYTDLMLKLFDSNND 161
Query: 71 GTIDFPEFLNLMA------RKMKDTD-SEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 123
G ++ E L+ K + +E +AF ++D+D NG+I EL ++ +L
Sbjct: 162 GKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLC 221
Query: 124 EK 125
EK
Sbjct: 222 EK 223
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 18/132 (13%)
Query: 45 TEAELQD-MINEAELQDMINEVDADGNGTIDFPEFLNLM-----ARKMKDTDSEEELKEA 98
E+ LQ +I ++ ++ DADG+G ++ E NL+ ARK + E+K
Sbjct: 4 AESHLQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTF 63
Query: 99 FRVFDKDQNGFISAAELRHVMTN---------LGEKLTDEEVDEMIREADVDGDGQINYE 149
+ + +G I EL HV+ + + EE + R+ D D G I E
Sbjct: 64 VDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETE 123
Query: 150 E---FVKVMMAK 158
E F+K ++ K
Sbjct: 124 ELKNFLKDLLEK 135
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 7/73 (9%)
Query: 91 SEEELKEAFRVF---DKDQNGFISAAELRHVMTNLGEKLTD--EEVDEMIREADVDGDGQ 145
S EE+K AF VF + D N IS EL+ VM LG L +DEMI E D +GDG+
Sbjct: 3 SPEEIKGAFEVFAAKEGDPNQ-ISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 146 INYEEFVKVMMAK 158
+++EEF+ VMM K
Sbjct: 62 VSFEEFL-VMMKK 73
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 12 EFKEAFSLFD-KDGD-GCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
E K AF +F K+GD I+ +EL VM++LG + L+ M + L +MI EVD +G
Sbjct: 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGP----SLLKGM---STLDEMIEEVDKNG 58
Query: 70 NGTIDFPEFLNLMAR 84
+G + F EFL +M +
Sbjct: 59 DGEVSFEEFLVMMKK 73
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDFP 76
F D +GDG ++ +E+ + ++ + + NE LQ + +DADGNG ID
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFV---------SKKRAIKNEQLLQLIFKSIDADGNGEIDQN 56
Query: 77 EFLNLMARKMKD--TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEM 134
EF +D + LK +++ D D +G ++ E+ T+ +K E+V E
Sbjct: 57 EFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV----TSFFKKHGIEKVAEQ 112
Query: 135 IREADVDGDGQINYEEFV 152
+ +AD +GDG I EEF+
Sbjct: 113 VMKADANGDGYITLEEFL 130
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
+ E+D +G+G + + E +++K + +E+ L+ F+ D D NG I E
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 121 NL-GEKLTDEEV--DEMIREADVDGDGQINYEE 150
++ G+ L+D+++ + + DVDGDG++ EE
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE 96
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 134 MIREADVDGDGQINYEEFVKVMMAK 158
+ +E DV+GDG ++YEE VK ++K
Sbjct: 5 LFKEIDVNGDGAVSYEE-VKAFVSK 28
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDFP 76
F D +GDG ++ +E+ + ++ + + NE LQ + +DADGNG ID
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFV---------SKKRAIKNEQLLQLIFKSIDADGNGEIDQN 56
Query: 77 EFLNLMARKMKD--TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEM 134
EF +D + LK +++ D D +G ++ E +T+ +K E+V E
Sbjct: 57 EFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE----VTSFFKKHGIEKVAEQ 112
Query: 135 IREADVDGDGQINYEEFV 152
+ +AD +GDG I EEF+
Sbjct: 113 VMKADANGDGYITLEEFL 130
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
+ E+D +G+G + + E +++K + +E+ L+ F+ D D NG I E
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 121 NL-GEKLTDEEV--DEMIREADVDGDGQINYEE 150
++ G+ L+D+++ + + DVDGDG++ EE
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE 96
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 134 MIREADVDGDGQINYEEFVKVMMAK 158
+ +E DV+GDG ++YEE VK ++K
Sbjct: 5 LFKEIDVNGDGAVSYEE-VKAFVSK 28
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQIN 147
S +LKE FR+ D DQ+GFI EL++ + LT E + AD DGDG+I
Sbjct: 39 SSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIG 98
Query: 148 YEEF 151
EEF
Sbjct: 99 AEEF 102
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MA++L++++I KE F + D D G IT EL ++ +G E+E++D+++ A
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAA---- 68
Query: 61 MINEVDADGNGTIDFPEFL 79
D D +GTID+ EF+
Sbjct: 69 -----DIDKSGTIDYGEFI 82
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 84 RKMKDTDSEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 140
+ M + SEEE LKE F++ D D +G I+ EL+ + +G +L + E+ +++ AD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 141 DGDGQINYEEFV 152
D G I+Y EF+
Sbjct: 71 DKSGTIDYGEFI 82
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 89 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQ 145
+ S +++K+AF + D+D++GFI EL+ + N LTD E ++ D DGDG+
Sbjct: 38 SKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 97
Query: 146 INYEEFVKVMMA 157
I +EF ++ A
Sbjct: 98 IGVDEFTALVKA 109
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
LT + K+AF++ D+D G I EL +++ + + + E + +
Sbjct: 36 LTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADAR------ALTDGETKTFLKA 89
Query: 65 VDADGNGTIDFPEFLNLM 82
D+DG+G I EF L+
Sbjct: 90 GDSDGDGKIGVDEFTALV 107
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL----- 115
+ N DADGNG I F +F+ ++ ++ T E+LK AF ++D +++G I+ E+
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGT-VHEKLKWAFNLYDINKDGCITKEEMLAIMK 192
Query: 116 -------RHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
RH L E E V+ ++ D + DG + +EF+
Sbjct: 193 SIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFL 236
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSL----GQNPTEAELQDMINEAELQDMINEVDA 67
+ K AF+L+D + DGCIT +E+ +M+S+ G++ +D E ++ ++D
Sbjct: 166 KLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLE-HVERFFQKMDR 224
Query: 68 DGNGTIDFPEFL 79
+ +G + EFL
Sbjct: 225 NQDGVVTIDEFL 236
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 69/135 (51%), Gaps = 15/135 (11%)
Query: 22 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDFPEFLNL 81
K +G + ++ R LG P+ + E +++D+ + ++ + ++L
Sbjct: 7 KSSNGKLRIEDASHNARKLGLAPSSTD------EKKIRDLYGD-------SLTYEQYLEY 53
Query: 82 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 141
+ + D D+ EEL + F FD + +GF++ + ++++T G+ LT++E ++ +
Sbjct: 54 LTXCVHDRDNXEELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEANDALNA--FS 111
Query: 142 GDGQINYEEFVKVMM 156
+ +INY+ F + ++
Sbjct: 112 SEDRINYKLFCEDIL 126
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 49 LQDMINEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 108
+ D+++ +++ ++ A + ++ F + + K D ++K+ F + D+D++G
Sbjct: 2 ITDILSAKDIESALSSCQA--ADSFNYKSFFSTVGLSSKTPD---QIKKVFGILDQDKSG 56
Query: 109 FISAAELRHVMTNLGEK---LTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
FI EL+ + N LT E + D DGDG+I EEF ++ A
Sbjct: 57 FIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 108
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 89 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQ 145
+ S +++K+AF + D+D++GFI EL+ + N LTD E ++ D DGDG+
Sbjct: 37 SKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 146 INYEEFVKVMMA 157
I +E+ ++ A
Sbjct: 97 IGVDEWTALVKA 108
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
LT + K+AF++ D+D G I EL +++ + + + E + +
Sbjct: 35 LTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADAR------ALTDGETKTFLKA 88
Query: 65 VDADGNGTIDFPEFLNLM 82
D+DG+G I E+ L+
Sbjct: 89 GDSDGDGKIGVDEWTALV 106
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 94 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
E + F+ FD + +G ISAAEL + LG +T +EV M+ E D DGDG I+++EF
Sbjct: 10 ERERIFKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQEFT 67
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGN 70
+E + F FD +GDG I+ ELG +++LG I E++ M+ E+D DG+
Sbjct: 9 AERERIFKRFDANGDGKISAAELGEALKTLGS----------ITPDEVKHMMAEIDTDGD 58
Query: 71 GTIDFPEFLNL 81
G I F EF +
Sbjct: 59 GFISFQEFTDF 69
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMIN-EAELQD 60
K+ F+LFDK G G I LG +R++G NPT +QD+IN ++ L+D
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRD 54
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
MA + T I++ + F FD +GDG I++ ELG +++LG + E++
Sbjct: 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGS----------VTPDEVRR 50
Query: 61 MINEVDADGNGTIDFPEFLNL 81
M+ E+D DG+G I F EF +
Sbjct: 51 MMAEIDTDGDGFISFDEFTDF 71
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 99 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
F+ FD + +G IS++EL + LG +T +EV M+ E D DGDG I+++EF A
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 74
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 49 LQDMINEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 108
+ D+++ +++ ++ A + ++ F + + K D ++K+ F + D+D++G
Sbjct: 3 ITDILSAKDIESALSSCQA--ADSFNYKSFFSTVGLSSKTPD---QIKKVFGILDQDKSG 57
Query: 109 FISAAELRHVMTNLGEK---LTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
FI EL+ + N LT E + D DGDG+I EEF ++ A
Sbjct: 58 FIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 109
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 89 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQ 145
+ S +++K+AF V D+D++GFI EL+ + N LTD E + + D DGDG
Sbjct: 37 SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGM 96
Query: 146 INYEEFVKVMMA 157
I +EF ++ A
Sbjct: 97 IGVDEFAAMIKA 108
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L + + K+AF + D+D G I EL +++ +P+ L D AE + + +
Sbjct: 35 LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNF--SPSARALTD----AETKAFLAD 88
Query: 65 VDADGNGTIDFPEFLNLM 82
D DG+G I EF ++
Sbjct: 89 GDKDGDGMIGVDEFAAMI 106
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADVDGDGQIN 147
S +++K+AF D+D++GFI EL+ V LTD E ++ D DGDG I
Sbjct: 40 SADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 99
Query: 148 YEEFVKVMMA 157
EE+V ++ A
Sbjct: 100 VEEWVALVKA 109
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+ + K+AF D+D G I EL ++ + +AE + +
Sbjct: 36 LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGAR------ALTDAETKAFLKA 89
Query: 65 VDADGNGTIDFPEFLNLM 82
D+DG+G I E++ L+
Sbjct: 90 GDSDGDGAIGVEEWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADVDGDGQIN 147
S +++K+AF D+D++GFI EL+ V LTD E ++ D DGDG I
Sbjct: 39 SADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 98
Query: 148 YEEFVKVMMA 157
EE+V ++ A
Sbjct: 99 VEEWVALVKA 108
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
L+ + K+AF D+D G I EL ++ + +AE + +
Sbjct: 35 LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGAR------ALTDAETKAFLKA 88
Query: 65 VDADGNGTIDFPEFLNLM 82
D+DG+G I E++ L+
Sbjct: 89 GDSDGDGAIGVEEWVALV 106
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 18/153 (11%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
A + D+Q E E F D DG G I+ EL + S G + A + +
Sbjct: 20 ARHMNDNQ--ELMEWFRAVDTDGSGAISVPELNAALSSAGVP---------FSLATTEKL 68
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
++ D + +G I F EF +L + ++E FR D +G + + E+R + +
Sbjct: 69 LHMYDKNHSGEITFDEFKDLHHFIL-------SMREGFRKRDSSGDGRLDSNEVRAALLS 121
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 154
G +++++ ++R+ D G + ++++V++
Sbjct: 122 SGYQVSEQTFQALMRKFDRQRRGSLGFDDYVEL 154
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 1 MADQLT--DDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAEL 58
MA +L+ ++ I E F D + +G ++ +E+ TV+ S+G I + ++
Sbjct: 27 MAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG-----------IKKWDI 75
Query: 59 QDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL 115
++ +D + G I + EF+ R K+ +S LK AF DKD++G+IS +++
Sbjct: 76 NRILQALDINDRGNITYTEFMAGCYR-WKNIESTF-LKAAFNKIDKDEDGYISKSDI 130
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 93 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
+ + E F D + NG +S E+ V+ ++G K D ++ +++ D++ G I Y EF+
Sbjct: 39 KYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWD--INRILQALDINDRGNITYTEFM 96
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Query: 58 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 117
++ M D + +G IDF E++ ++ +K +++L+ F+++D D NG I EL +
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSLVLKGK-VDQKLRWYFKLYDVDGNGCIDRGELLN 112
Query: 118 VMTNL------GEKLTDEEVDEMIR-EADVDGDGQINYEEFV 152
++ + E +T EE M+ + D++GDG+++ EEF+
Sbjct: 113 IIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFM 154
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 43/88 (48%)
Query: 70 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 129
+G + EF K + + +++ F FD +++G+I E ++ + + D+
Sbjct: 29 SGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQ 88
Query: 130 EVDEMIREADVDGDGQINYEEFVKVMMA 157
++ + DVDG+G I+ E + ++ A
Sbjct: 89 KLRWYFKLYDVDGNGCIDRGELLNIIKA 116
Score = 32.7 bits (73), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEA----ELQDMI-NEVD 66
+ + F L+D DG+GCI EL +++++ + NEA E +M+ +++D
Sbjct: 89 KLRWYFKLYDVDGNGCIDRGELLNIIKAI-------RAINRCNEAMTAEEFTNMVFDKID 141
Query: 67 ADGNGTIDFPEFL 79
+G+G + EF+
Sbjct: 142 INGDGELSLEEFM 154
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 59 QDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHV 118
+ M+ E + + + L +MA KM + EL + F + + I+A LR
Sbjct: 6 KSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRN 65
Query: 119 MTNLG-EKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 156
LG E ++ E+ M+RE D+DGDG +N EF +M+
Sbjct: 66 SGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMV 104
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADG 69
+SE + FSL IT + SL +N ++ M E + Q M+ E D DG
Sbjct: 39 VSELCKGFSLLADPERHLITAE-------SLRRNSGILGIEGMSKE-DAQGMVREGDLDG 90
Query: 70 NGTIDFPEFLNLMAR 84
+G ++ EF LM R
Sbjct: 91 DGALNQTEFCVLMVR 105
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 49 LQDMINEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 108
+ D+++ +++ I A + D +F ++ K K D ++K+ F + DKD++G
Sbjct: 2 MTDLLSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSG 56
Query: 109 FISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQINYEEF 151
FI EL ++ L+ +E ++ D DGDG+I EEF
Sbjct: 57 FIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTI 73
K+ F + DKD G I ELG++++ + + ++ E + ++ D DG+G I
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARD------LSAKETKTLMAAGDKDGDGKI 97
Query: 74 DFPEFLNLMA 83
EF L+A
Sbjct: 98 GVEEFSTLVA 107
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 49 LQDMINEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 108
+ D+++ +++ I A + D +F ++ K K D ++K+ F + DKD++G
Sbjct: 2 MTDLLSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSG 56
Query: 109 FISAAELRHVMTNLGE---KLTDEEVDEMIREADVDGDGQINYEEF 151
FI EL ++ L+ +E ++ D DGDG+I EEF
Sbjct: 57 FIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEF 102
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTI 73
K+ F + DKD G I ELG++++ + + ++ E + ++ D DG+G I
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDAAD------LSAKETKTLMAAGDKDGDGKI 97
Query: 74 DFPEFLNLMA 83
EF L+A
Sbjct: 98 GVEEFSTLVA 107
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADVDGDGQIN 147
S +++K+AF V D+D++GFI EL+ V + LTD E ++ D DGDG I
Sbjct: 40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIG 99
Query: 148 YEEFVKVMMA 157
+E+ ++ A
Sbjct: 100 VDEWAALVKA 109
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
LT + K+AF + D+D G I EL ++ + +AE + +
Sbjct: 36 LTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGAR------ALTDAETKAFLKA 89
Query: 65 VDADGNGTIDFPEFLNLM 82
D+DG+G I E+ L+
Sbjct: 90 GDSDGDGAIGVDEWAALV 107
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 10/65 (15%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDFP 76
F FD +GDG I+ EL +R+LG + E+Q M+ E+D DG+G IDF
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGSTSAD----------EVQRMMAEIDTDGDGFIDFN 58
Query: 77 EFLNL 81
EF++
Sbjct: 59 EFISF 63
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 93 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
++++ F+ FD + +G IS +EL + LG DE V M+ E D DGDG I++ EF+
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 61
Query: 153 KVMMA 157
A
Sbjct: 62 SFCNA 66
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 10/65 (15%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDFP 76
F FD +GDG I+ EL +R+LG + E+Q M+ E+D DG+G IDF
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGSTSAD----------EVQRMMAEIDTDGDGFIDFN 57
Query: 77 EFLNL 81
EF++
Sbjct: 58 EFISF 62
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 93 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
++++ F+ FD + +G IS +EL + LG DE V M+ E D DGDG I++ EF+
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 60
Query: 153 KVMMA 157
A
Sbjct: 61 SFCNA 65
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 49 LQDMINEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 108
+ D+++ +++ I A + D +F ++ K K S +++K+ F + DKD++G
Sbjct: 2 MTDLLSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLKKK---SADDVKKVFHILDKDKDG 56
Query: 109 FISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQINYEEF 151
FI EL ++ L+ +E ++ D DGDG+I EEF
Sbjct: 57 FIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTI 73
K+ F + DKD DG I ELG++++ + + ++ E + ++ D DG+G I
Sbjct: 44 KKVFHILDKDKDGFIDEDELGSILKGFSSDARD------LSAKETKTLMAAGDKDGDGKI 97
Query: 74 DFPEFLNLMA 83
EF L+A
Sbjct: 98 GVEEFSTLVA 107
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Query: 13 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGT 72
FK FS D D I+ KEL T++ + + E+ + M+N +D DGNG
Sbjct: 536 FKTLFSKLAGD-DMEISVKELQTILNRIISKHKDLRTNGFSLES-CRSMVNLMDRDGNGK 593
Query: 73 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 132
+ EF N++ ++++ + FR FD D++G +SA E+R + G KL ++
Sbjct: 594 LGLVEF-NILWNRIRNYLT------IFRKFDLDKSGSMSAYEMRMAIEAAGFKLPC-QLH 645
Query: 133 EMIREADVDGDGQINYEEFVKVMM 156
++I D + I+++ FV+ ++
Sbjct: 646 QVIVARFADDELIIDFDNFVRCLV 669
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 49 LQDMINEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 108
+ D++N +++ + A + D +F ++ K K D ++K+ F + DKD++G
Sbjct: 3 MTDLLNAEDIKKAVGAFSA--TDSFDHKKFFQMVGLKKKSAD---DVKKVFHMLDKDKSG 57
Query: 109 FISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQINYEEF 151
FI EL ++ L+ +E ++ D DGDG+I +EF
Sbjct: 58 FIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEF 103
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTI 73
K+ F + DKD G I ELG +++ G +P +L + E + ++ D DG+G I
Sbjct: 45 KKVFHMLDKDKSGFIEEDELGFILK--GFSPDARDL----SAKETKMLMAAGDKDGDGKI 98
Query: 74 DFPEFLNLMA 83
EF L+A
Sbjct: 99 GVDEFSTLVA 108
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 13/104 (12%)
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
+ N DAD NG IDF EF+ ++ + + ++L AF+++D D NG IS E+ ++
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSR-GELNDKLIWAFQLYDLDNNGLISYDEMLRIVD 126
Query: 121 NLGE------KLTDEE------VDEMIREADVDGDGQINYEEFV 152
+ + KL ++E V+++ D + DGQ+ EEF
Sbjct: 127 AIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFC 170
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 45 TEAELQDMI-----NEAELQDMINEVDAD-GNGTIDFPEFLNLMARKMKDTDSEEELKEA 98
++ +LQD++ ++ ELQ D +G ++ EF + + D +
Sbjct: 9 SQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYV 68
Query: 99 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
F VFD D+NG+I E ++ ++++ + D+D +G I+Y+E ++++ A
Sbjct: 69 FNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 89 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQ 145
+ S +++K+AF + +D++GFI EL+ + N LTD E ++ D DGDG+
Sbjct: 37 SKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 146 INYEEFVKVMMA 157
I +E+ ++ A
Sbjct: 97 IGVDEWTALVKA 108
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 66 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN---- 121
D NG I+F EF+ + E++K AF+++D Q GFI EL+ ++
Sbjct: 84 DVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 122 ----LGEKLTDEEVDEMIREADVDGDGQINYEEF 151
L E + + VD+ +AD DG+I+ +E+
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQIN 147
S ++K+ FR D DQ+G++ EL++ + +LT+ E ++ AD DGDG+I
Sbjct: 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIG 98
Query: 148 YEEFVKVMMA 157
+EF +++ +
Sbjct: 99 ADEFQEMVHS 108
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGN 70
S+ K+ F D D G + EL ++ + E + E+E + +++ D DG+
Sbjct: 41 SQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARE------LTESETKSLMDAADNDGD 94
Query: 71 GTIDFPEF 78
G I EF
Sbjct: 95 GKIGADEF 102
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 66 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN---- 121
D NG I+F EF+ + E++K AF+++D Q GFI EL+ ++
Sbjct: 84 DVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 122 ----LGEKLTDEEVDEMIREADVDGDGQINYEEF 151
L E + + VD+ +AD DG+I+ +E+
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQIN 147
S ++K+ FR D DQ+G++ EL+ + +LT+ E ++ AD DGDG+I
Sbjct: 40 SANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIG 99
Query: 148 YEEF 151
EEF
Sbjct: 100 AEEF 103
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 21 DKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDFPEFLN 80
+K G I+ R LG P+ I+E +++++ + + + ++L
Sbjct: 25 EKSSGGKISIDNASYNARKLGLAPSS------IDEKKIKELYGD-------NLTYEQYLE 71
Query: 81 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 131
++ + D D+ EEL + F FD + G+++ +++++++T G+ LTD+E
Sbjct: 72 YLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEA 122
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 32 ELGTVMRSLGQNPTEAELQDMINEA--ELQDMINEVDADGNGTIDFPEFLNLMARKMKDT 89
E + +++L + T LQ + +A + + N D + +G +DF EF+ + M++
Sbjct: 31 EYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEK 90
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMT-----NLGEKLTDEE-VDEMIREADVDGD 143
E++LK F+++D D NG I EL + N + L+ EE ++ + + D++ D
Sbjct: 91 -MEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINND 149
Query: 144 GQINYEEFVKVM 155
G++ EEF+ M
Sbjct: 150 GELTLEEFINGM 161
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 41/81 (50%)
Query: 77 EFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIR 136
EF L+ + + + + + + + FD +++GF+ E + + ++ ++++ +
Sbjct: 41 EFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFK 100
Query: 137 EADVDGDGQINYEEFVKVMMA 157
D DG+G I+ E + + MA
Sbjct: 101 LYDADGNGSIDKNELLDMFMA 121
Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSL----GQNPTEAELQDMINEAELQDMINEVDA 67
+ K F L+D DG+G I EL + ++ GQ E + IN + +++D
Sbjct: 94 KLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPE--EFINL-----VFHKIDI 146
Query: 68 DGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 99
+ +G + EF+N MA KD D E + ++F
Sbjct: 147 NNDGELTLEEFINGMA---KDQDLLEIVYKSF 175
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 49 LQDMINEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 108
+ D+++ +++ I A + D +F ++ K K D ++K+ F + DKD++G
Sbjct: 2 MTDLLSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSG 56
Query: 109 FISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQINYEEF 151
FI EL ++ L+ +E ++ D DG G+I EEF
Sbjct: 57 FIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEF 102
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTI 73
K+ F + DKD G I ELG++++ + + ++ E + ++ D DG+G I
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARD------LSAKETKTLMAAGDKDGSGKI 97
Query: 74 DFPEFLNLMA 83
+ EF L+A
Sbjct: 98 EVEEFSTLVA 107
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 96 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
K F FDK+++G +S E R V T E++ + E DVDG+G++N +EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTI 73
K F FDK+ DG ++ E V +L +P + ++ E+D DGNG +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREV--ALAFSP-------YFTQEDIVKFFEEIDVDGNGEL 54
Query: 74 DFPEFLNLMARKM 86
+ EF + + + +
Sbjct: 55 NADEFTSCIEKML 67
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQIN 147
S +++K+AF + +D++GFI EL+ + N LTD E ++ D DGDG+I
Sbjct: 39 SADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIG 98
Query: 148 YEEFVKVMMA 157
+++ ++ A
Sbjct: 99 VDDWTALVKA 108
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 10 ISEFKEAFSLFDKDG-----DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
+SE + + LF K DG I +E + N E+ D + +
Sbjct: 13 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRV--------FDL 62
Query: 65 VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT---- 120
D NG + F EF ++ + ++++ +F+++D Q GFI E++ ++
Sbjct: 63 FDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLA 122
Query: 121 ----NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 156
NL + + ++ +D+ EAD DG+I+ EE+ +++
Sbjct: 123 ESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 162
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 25/165 (15%)
Query: 13 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM----INEVDAD 68
F + + FD D +G I KEL R + + +D I + +Q + + DA
Sbjct: 13 FLQIWQHFDADDNGYIEGKELDDFFR---HXLKKLQPKDKITDERVQQIKKSFXSAYDAT 69
Query: 69 GNGTIDFPEFLN----------LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHV 118
+G + E N L+ R+ D+ E + +R +D D +G+ISAAEL++
Sbjct: 70 FDGRLQIEELANXILPQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNF 129
Query: 119 MTNL----GEKLT----DEEVDEMIREADVDGDGQINYEEFVKVM 155
+ +L +K+ DE D + D + DG+++ + +++
Sbjct: 130 LKDLFLQHKKKIPPNKLDEYTDAXXKIFDKNKDGRLDLNDLARIL 174
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 10 ISEFKEAFSLFDKDG-----DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINE 64
+SE + + LF K DG I +E + N E+ D + +
Sbjct: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRV--------FDL 93
Query: 65 VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT---- 120
D NG + F EF ++ + ++++ +F+++D Q GFI E++ ++
Sbjct: 94 FDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLA 153
Query: 121 ----NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 156
NL + + ++ +D+ EAD DG+I+ EE+ +++
Sbjct: 154 ESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 193
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQIN 147
S +++K+ F + DKD++GFI EL ++ L+ +E ++ D DGDG+I
Sbjct: 3 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 62
Query: 148 YEEF 151
EEF
Sbjct: 63 VEEF 66
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTI 73
K+ F + DKD G I ELG++++ + + ++ E + ++ D DG+G I
Sbjct: 8 KKVFHILDKDKSGFIEEDELGSILKGFSSDARD------LSAKETKTLMAAGDKDGDGKI 61
Query: 74 DFPEFLNLMA 83
EF L+A
Sbjct: 62 GVEEFSTLVA 71
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
M++ +D D +GT+ F EF L A ++ F FD D++G + EL+ +T
Sbjct: 78 MVSMLDRDMSGTMGFNEFKELWA-------VLNGWRQHFISFDTDRSGTVDPQELQKALT 130
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 156
+G +L+ + V+ + + +G+I +++++ +
Sbjct: 131 TMGFRLSPQAVNSIAKRYST--NGKITFDDYIACCV 164
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
+ T++++S + ++F + G IT +E T+ + +A Q +
Sbjct: 21 KFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKF--------FPEADPKAYAQHVFR 70
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
DA+ +GT+DF ++ ++A M + ++L+ AF ++D D NG IS E+ ++T +
Sbjct: 71 SFDANSDGTLDFKQY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 123 GEKLTDEEVDEM 134
+ ++ E+ +
Sbjct: 129 FKMISPEDTKHL 140
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 46 EAELQDMINEAEL----QDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 101
E +L E EL Q + E + G I EF + ++ + D + + FR
Sbjct: 15 ELQLNTKFTEEELSSWYQSFLKECPS---GRITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 102 FDKDQNG---FISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
FD + +G F H MT+ G+ T+++++ DVDG+G I+ E ++++ A
Sbjct: 72 FDANSDGTLDFKQYVIALH-MTSAGK--TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
+ T++++S + ++F + G IT +E T+ + +A Q +
Sbjct: 21 KFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKF--------FPEADPKAYAQHVFR 70
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 122
DA+ +GT+DF ++ ++A M + ++L+ AF ++D D NG IS E+ ++T +
Sbjct: 71 SFDANSDGTLDFKQY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 123 GEKLTDEEVDEM 134
+ ++ E+ +
Sbjct: 129 FKMISPEDTKHL 140
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 46 EAELQDMINEAEL----QDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 101
E +L E EL Q + E + G I EF + ++ + D + + FR
Sbjct: 15 ELQLNTKFTEEELSSWYQSFLKECPS---GRITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 102 FDKDQNG---FISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
FD + +G F H MT+ G+ T+++++ DVDG+G I+ E ++++ A
Sbjct: 72 FDANSDGTLDFKQYVIALH-MTSAGK--TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 47 AELQDMINEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQ 106
A+L ++++AE + + + D +G+GT+D EFL + M E + AF D+
Sbjct: 64 AKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQA-REAVIAAAFAKLDRSG 122
Query: 107 NGFISAAELR-------HVMTNLGEKLTDEEVDEMIREAD-VDGDGQINYEEF 151
+G ++ +LR H GE DE + + D + DGQ+ EF
Sbjct: 123 DGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEF 175
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 95 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 154
L FR D+D + + A E R + LG L E + + R+ D +G G ++ EEF++
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 155 M 155
+
Sbjct: 99 L 99
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 19/160 (11%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAELQDMINEAELQDMIN 63
++ K F+ D +G+G IT E+ + + LG P + + EA
Sbjct: 21 WVNRHKFMFNFLDINGNGKITLDEIVSKASDDICAKLGATPAQTQRHQEAVEA----FFK 76
Query: 64 EVDADGNGTIDFPEFLNLMAR------KMKDTDSEEELKE----AFRVFDKDQNGFISAA 113
++ D ++FP F+N K+ + + ++ F +FDKD +G IS
Sbjct: 77 KIGLDYGKEVEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLD 136
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E + G +DE+ ++ + D+D G+++ +E +
Sbjct: 137 EWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMTR 176
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
M++ +D D +GT+ F EF L A ++ F FD D++G + EL+ +T
Sbjct: 47 MVSMLDRDMSGTMGFNEFKELWA-------VLNGWRQHFISFDSDRSGTVDPQELQKALT 99
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 156
+G +L + V+ + + G+I +++++ +
Sbjct: 100 TMGFRLNPQTVNSIAKRYST--SGKITFDDYIACCV 133
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 20/111 (18%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDFP 76
F++FDKD +G I +E TV+ + + E +L EL D+ + +G I F
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAF---ELYDL------NHDGYITFD 119
Query: 77 EFLNLMARKMK-----------DTDSEEELKEAFRVFDKDQNGFISAAELR 116
E L ++A K + E +K+ F++ DK+++G+I+ E R
Sbjct: 120 EMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR 170
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
+ D D NG I F EF+ +++ + T EE+L AF ++D + +G+I+ E+ ++
Sbjct: 68 LFTVFDKDNNGFIHFEEFITVLSTTSRGT-LEEKLSWAFELYDLNHDGYITFDEMLTIVA 126
Query: 121 N----LGEKLT---DEEVDEM-----IREADVDGDGQINYEEF 151
+ +G +T DE EM + D + DG I +EF
Sbjct: 127 SVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 99 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
F VFDKD NGFI E V++ +E++ D++ DG I ++E + ++ +
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 34/178 (19%)
Query: 1 MADQLTDD-----QISEFKEAFSLFDKDGDGCITTKEL-----GTVMRSLGQNPTEAELQ 50
M+ +LT D I K F+ D + +G I+ E+ V+ +LG P +A+
Sbjct: 1 MSVKLTPDFDNPKWIGRHKHMFNFLDVNHNGRISLDEMVYKASDIVINNLGATPEQAKRH 60
Query: 51 DMINEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEA------------ 98
EA + + ++PE++ R + EELK
Sbjct: 61 KDAVEAFFGGAGMKYGVE----TEWPEYIEGWKRL-----ASEELKRYSKNQITLIRLWG 111
Query: 99 ---FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
F + DKDQNG IS E + + G + E+ +E R D+D GQ++ +E +
Sbjct: 112 DALFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEMTR 169
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 14/151 (9%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSL----GQNPTEAELQDMINEAE--LQDMINEVDADGN 70
F+ FD+DG+G I + ++L G Q + AE Q + D DG+
Sbjct: 10 FTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGD 69
Query: 71 GTIDFPEFLNLMARKMKDTD------SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE 124
I EF+ ++++D + L A V D D +G ++ A+ +T G
Sbjct: 70 QRITREEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVTVADTARALTAFG- 128
Query: 125 KLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+ ++ + D DGDG++ E V
Sbjct: 129 -VPEDLARQAAAALDTDGDGKVGETEIVPAF 158
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 72 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GE--KL 126
++ F +FL+L++ + + AFR+FD D +G ++ +L ++ L GE +L
Sbjct: 108 SLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRL 167
Query: 127 TDEE----VDEMIREADVDGDGQINYEEFVKVM 155
+ E +D ++ E+D+D DG IN EF V+
Sbjct: 168 SASEMKQLIDNILEESDIDRDGTINLSEFQHVI 200
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+D T D S + AF +FD D DG + ++L ++ L + L + + +
Sbjct: 121 FSDTATPDIKSHY--AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDN 178
Query: 61 MINEVDADGNGTIDFPEFLNLMAR 84
++ E D D +GTI+ EF ++++R
Sbjct: 179 ILEESDIDRDGTINLSEFQHVISR 202
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 67 ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---G 123
+ ++ F +FL+L++ + + AFR+FD D +G ++ +L ++ L G
Sbjct: 72 SPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEG 131
Query: 124 E--KLTDEE----VDEMIREADVDGDGQINYEEFVKVM 155
E +L+ E +D ++ E+D+D DG IN EF V+
Sbjct: 132 EDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVI 169
Score = 33.1 bits (74), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQD 60
+D T D S + AF +FD D DG + ++L ++ L + L + + +
Sbjct: 90 FSDTATPDIKSHY--AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDN 147
Query: 61 MINEVDADGNGTIDFPEFLNLMAR 84
++ E D D +GTI+ EF ++++R
Sbjct: 148 ILEESDIDRDGTINLSEFQHVISR 171
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
M++ +D D +GT+ F EF L A ++ F D D++G + EL+ +T
Sbjct: 78 MVSMLDRDMSGTMGFNEFKELWA-------VLNGWRQHFISLDTDRSGTVDPQELQKALT 130
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 156
+G +L+ + V+ + + +G+I +++++ +
Sbjct: 131 TMGFRLSPQAVNSIAKRYST--NGKITFDDYIACCV 164
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 11/77 (14%)
Query: 82 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL--GEKLTDEEVDE----MI 135
MA K+K EL+ AF+ D + +G+++A EL+ M L + L+ ++V E +I
Sbjct: 1 MACKVK-----AELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLI 55
Query: 136 READVDGDGQINYEEFV 152
+ AD + DG+I+ EEF+
Sbjct: 56 KMADKNSDGKISKEEFL 72
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
+ N D + +G I+F EF+ ++ + T +E+L+ AF+++D D +G+I+ E+ ++
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGT-LDEKLRWAFKLYDLDNDGYITRNEMLDIVD 126
Query: 121 NLGE------KLTDEE------VDEMIREADVDGDGQINYEEF 151
+ + +L +EE VD + D + DG++ +EF
Sbjct: 127 AIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEF 169
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 98 AFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
F VFD++++G I +E ++ DE++ + D+D DG I E + ++
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIV 125
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQ---NPTEAELQDMINEAELQDMINEVDAD 68
+ + AF L+D D DG IT E+ ++ ++ Q N E ++ E + + +D +
Sbjct: 100 KLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKN 159
Query: 69 GNGTIDFPEF 78
+G + EF
Sbjct: 160 ADGKLTLQEF 169
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 19/164 (11%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAELQDMINEAELQDMIN 63
I K F D +G+G IT E+ + + ++LG P + + EA +
Sbjct: 18 WIKRHKFMFDYLDINGNGQITLDEIVSKASDDICKNLGATPAQTQRHQDCVEAFFRGCGL 77
Query: 64 EVDADGNGTIDFPEFL----NL----MARKMKDTDS--EEELKEAFRVFDKDQNGFISAA 113
E + FPEFL NL +A+ ++ + E F +FDKD +G I+
Sbjct: 78 EYGKE----TKFPEFLEGWKNLANADLAKWARNEPTLIREWGDAVFDIFDKDGSGTITLD 133
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
E + G ++E+ ++ + D+D G+++ +E + +
Sbjct: 134 EWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMTRQHLG 177
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 46 EAELQDMINEAELQDMINEVDAD-GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDK 104
E +L +E EL D G I +F ++ A+ DTD + + FR FD
Sbjct: 23 ELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDS 82
Query: 105 DQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
+ +G + E + T+++++ DVDG+G I+ E ++++ A
Sbjct: 83 NLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXA 135
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
+D+ ++ FKE + FD +G+G I L ++ LG T EL+ +I E
Sbjct: 23 SDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEV----- 77
Query: 62 INEVDADGNG-TIDFPEFLNLMARK 85
+ G+G T +P+FL +M K
Sbjct: 78 -----SSGSGETFSYPDFLRMMLGK 97
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAELQDMINEAELQDMIN 63
I K F D +G+G IT E+ + + L P + + + EA +
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 EVDADGNGTIDFPEFLN----LMARKMKDTDSEEE--LKE----AFRVFDKDQNGFISAA 113
E + I FP+FL+ L ++K E ++E F +FDKD +G I+
Sbjct: 78 EYGKE----IAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLD 133
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E + G + E+ + R D+D G ++ +E +
Sbjct: 134 EWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAELQDMINEAELQDMIN 63
I K F D +G+G IT E+ + + L P + + + EA +
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 EVDADGNGTIDFPEFLN----LMARKMKDTDSEEE--LKE----AFRVFDKDQNGFISAA 113
E + I FP+FL+ L ++K E ++E F +FDKD +G I+
Sbjct: 78 EYGKE----IAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLD 133
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E + G + E+ + R D+D G ++ +E +
Sbjct: 134 EWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAELQDMINEAELQDMIN 63
I K F D +G+G IT E+ + + L P + + + EA +
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 EVDADGNGTIDFPEFLN----LMARKMKDTDSEEE--LKE----AFRVFDKDQNGFISAA 113
E + I FP+FL+ L ++K E ++E F +FDKD +G I+
Sbjct: 78 EYGKE----IAFPQFLDGFKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLD 133
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E + G + E+ + R D+D G ++ +E +
Sbjct: 134 EWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAELQDMINEAELQDMIN 63
I K F D +G+G IT E+ + + L P + + + EA +
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 EVDADGNGTIDFPEFLN----LMARKMKDTDSEEE--LKE----AFRVFDKDQNGFISAA 113
E + I FP+FL+ L ++K E ++E F +FDKD +G I+
Sbjct: 78 EYGKE----IAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLD 133
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E + G + E+ + R D+D G ++ +E +
Sbjct: 134 EWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTR 173
>pdb|1WLZ|A Chain A, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|B Chain B, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|C Chain C, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|D Chain D, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
Length = 105
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 81 LMARKMKDTDSE-EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 139
++AR K S + + F FD + IS E R + + LTDE+ D + E
Sbjct: 11 ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 70
Query: 140 VDGDGQINYEEFV 152
V+ G++ Y +F+
Sbjct: 71 VNAKGRLKYPDFL 83
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDM 61
+D+ ++ FKE + FD +G+G I L ++ LG T EL+ +I E
Sbjct: 42 SDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEV----- 96
Query: 62 INEVDADGNG-TIDFPEFLNLMARK 85
+ G+G T +P+FL +M K
Sbjct: 97 -----SSGSGETFSYPDFLRMMLGK 116
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAELQDMINEAELQDMIN 63
I K F D +G+G IT E+ + + L P + + + EA +
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 EVDADGNGTIDFPEFLN----LMARKMKDTDSEEE--LKE----AFRVFDKDQNGFISAA 113
E + I FP+FL+ L ++K E ++E F +FDKD +G I+
Sbjct: 78 EYGKE----IAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLD 133
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E + G + E+ + R D+D G ++ +E +
Sbjct: 134 EWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDEMTR 173
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 35.4 bits (80), Expect = 0.012, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 25 DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDFPEFLNLMAR 84
D I+ EL T++R + + + D + + M++ +D DG+G + EF L +
Sbjct: 545 DAEISAFELQTILRRVLAKREDIK-SDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK 603
Query: 85 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 144
K ++ +R D D++G +++ E+R + G KL ++ ++I D +
Sbjct: 604 IQK-------YQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDEL 655
Query: 145 QINYEEFVKVMM 156
I+++ FV+ ++
Sbjct: 656 IIDFDNFVRCLV 667
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 35.4 bits (80), Expect = 0.012, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 25 DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDFPEFLNLMAR 84
D I+ EL T++R + + + D + + M++ +D DG+G + EF L +
Sbjct: 545 DAEISAFELQTILRRVLAKREDIK-SDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK 603
Query: 85 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 144
K ++ +R D D++G +++ E+R + G KL ++ ++I D +
Sbjct: 604 IQK-------YQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDEL 655
Query: 145 QINYEEFVKVMM 156
I+++ FV+ ++
Sbjct: 656 IIDFDNFVRCLV 667
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 35.4 bits (80), Expect = 0.012, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 25 DGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDFPEFLNLMAR 84
D I+ EL T++R + + + D + + M++ +D DG+G + EF L +
Sbjct: 545 DAEISAFELQTILRRVLAKREDIK-SDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK 603
Query: 85 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 144
K ++ +R D D++G +++ E+R + G KL ++ ++I D +
Sbjct: 604 IQK-------YQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDEL 655
Query: 145 QINYEEFVKVMM 156
I+++ FV+ ++
Sbjct: 656 IIDFDNFVRCLV 667
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 91 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 123
SEEEL AFR+FDK+ +G+I EL ++ G
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILRATG 35
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLG 41
E AF +FDK+ DG I +ELG ++R+ G
Sbjct: 6 ELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
MI +D D G + F F L A + KE F D+D +G + ELR +
Sbjct: 45 MIAMLDRDHTGKMGFNAFKELWA-------ALNAWKENFMTVDQDGSGTVEHHELRQAIG 97
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 156
+G +L+ + + +++ +G+I ++++V +
Sbjct: 98 LMGYRLSPQTLTTIVKR--YSKNGRIFFDDYVACCV 131
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 23/162 (14%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKEL-----GTVMRSLGQNPTEAELQDMINEAELQDMIN 63
I K F+ D + +G I+ E+ V+ +LG P +A+ EA
Sbjct: 14 WIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGM 73
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKE------------AFRVFDKDQNGFIS 111
+ + D+P ++ K TD E+ + F + DKDQNG I+
Sbjct: 74 KYGVE----TDWPAYIE--GWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAIT 127
Query: 112 AAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 153
E + G + E+ +E R D+D GQ++ +E +
Sbjct: 128 LDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTR 169
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 120
MI +D D G + F F L A + KE F D+D +G + ELR +
Sbjct: 45 MIAMLDRDHTGKMGFNAFKELWA-------ALNAWKENFMTVDQDGSGTVEHHELRQAIG 97
Query: 121 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 156
+G +L+ + + +++ +G+I ++++V +
Sbjct: 98 LMGYRLSPQTLTTIVKR--YSKNGRIFFDDYVACCV 131
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 21/165 (12%)
Query: 9 QISEFKEAFSLFDKDGDGCIT-----TKELGTVMRSLGQNPTEAELQDMINEAELQDMIN 63
I K F+ D + +G I+ K V+ +LG P +A+ EA
Sbjct: 14 WIGRHKHXFNFLDVNHNGKISLDEXVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGX 73
Query: 64 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKE-----------AFRVFDKDQNGFISA 112
+ + D+P ++ +K+ + E+ K F + DKDQNG I+
Sbjct: 74 KYGVE----TDWPAYIEGW-KKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITL 128
Query: 113 AELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
E + G + E+ +E R D+D GQ++ +E + +
Sbjct: 129 DEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEXTRQHLG 173
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 67/133 (50%), Gaps = 17/133 (12%)
Query: 28 ITTKELGTVMRSLGQNPTEAELQDMINEA----ELQDMINEVDADGNGTIDFPEFLNLMA 83
I+ EL T++R + A+ QD+ ++ + M++ +D+DG+G + EF L
Sbjct: 547 ISAFELQTILRRV-----LAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWT 601
Query: 84 RKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGD 143
+ K ++ +R D D++G +++ E+R + G K+ ++ ++I D
Sbjct: 602 KIQK-------YQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPC-QLHQVIVARFADDQ 653
Query: 144 GQINYEEFVKVMM 156
I+++ FV+ ++
Sbjct: 654 LIIDFDNFVRCLV 666
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 95 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 154
KE + FD + G I L+ +M LG T E+ +MI E I+Y +FV +
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
Query: 155 MMAK 158
M+ K
Sbjct: 112 MLGK 115
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 92 EEELKEAFRVFDKDQNGFISAAEL------------RHVMTNLGEKLTDEEVDEMIREAD 139
E+LK AF ++D +++G+I+ E+ RH L E E V+ + D
Sbjct: 8 HEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMD 67
Query: 140 VDGDGQINYEEFV 152
+ DG + EEF+
Sbjct: 68 RNQDGVVTIEEFL 80
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSL----GQNPTEAELQDMINEAELQDMINEVDA 67
+ K AF+L+D + DG IT +E+ +M+S+ G++ +D E ++ ++D
Sbjct: 10 KLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAE-HVERFFEKMDR 68
Query: 68 DGNGTIDFPEFL 79
+ +G + EFL
Sbjct: 69 NQDGVVTIEEFL 80
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 46 EAELQDMINEAEL----QDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 101
E +L E EL Q + E + G I EF + ++ + D + + FR
Sbjct: 15 ELQLNTKFTEEELSSWYQSFLKECPS---GRITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 102 FDKDQNGFISAAE--LRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
FD + +G + E + MT+ G+ T+++++ DVDG+G I+ E ++++ A
Sbjct: 72 FDANSDGTLDFKEYVIALHMTSAGK--TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 95 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 154
KE + FD + G I L+ +M LG T E+ +MI E I+Y +FV +
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
Query: 155 MMAK 158
M+ K
Sbjct: 112 MLGK 115
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 46 EAELQDMINEAEL----QDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 101
E +L E EL Q + E + G I EF + ++ + D + + FR
Sbjct: 15 ELQLNTKFTEEELSSWYQSFLKECPS---GRITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 102 FDKDQNGFISAAE--LRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
FD + +G + E + MT+ G+ T+++++ DVDG+G I+ E ++++ A
Sbjct: 72 FDANSDGTLDFKEYVIALHMTSAGK--TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 46 EAELQDMINEAEL----QDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 101
E +L E EL Q + E + G I EF + ++ + D + + FR
Sbjct: 16 ELQLNTKFTEEELSSWYQSFLKECPS---GRITRQEFQTIYSKFFPEADPKAYAQHVFRS 72
Query: 102 FDKDQNGFISAAE--LRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
FD + +G + E + MT+ G+ T+++++ DVDG+G I+ E ++++ A
Sbjct: 73 FDANSDGTLDFKEYVIALHMTSAGK--TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 128
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 46 EAELQDMINEAEL----QDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 101
E +L E EL Q + E + G I EF + ++ + D + + FR
Sbjct: 15 ELQLNTKFTEEELSSWYQSFLKECPS---GRITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 102 FDKDQNGFISAAE--LRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
FD + +G + E + MT+ G+ T+++++ DVDG+G I+ E ++++ A
Sbjct: 72 FDANSDGTLDFKEYVIALHMTSAGK--TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 99 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
+ D D++G++S E + + +G LTD++ D + +GQI+ +EF+
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 99 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
+ D D++G++S E + + +G LTD++ D + +GQI+ +EF+
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 88 DTDSEE--ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 145
D D EE L+ F D +++G + E R + T L + D E + + D D DG
Sbjct: 20 DGDGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEA--VFQRLDADRDGA 77
Query: 146 INYEEFVKVMMAK 158
I ++EF + +
Sbjct: 78 ITFQEFARGFLGS 90
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 90 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 149
S + ++ F DK +G ++ + R ++ + L ++ + +D+D DG++ E
Sbjct: 11 SSRLKYRQLFNSHDKTMSGHLTGPQARTIL--MQSSLPQAQLASIWNLSDIDQDGKLTAE 68
Query: 150 EFVKVM 155
EF+ M
Sbjct: 69 EFILAM 74
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 89 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 148
+D + LK +++ D D +G ++ E+ T+ +K E+V E + +AD +GDG I
Sbjct: 1 SDDKIGLKVLYKLMDVDGDGKLTKEEV----TSFFKKHGIEKVAEQVMKADANGDGYITL 56
Query: 149 EEFV 152
EEF+
Sbjct: 57 EEFL 60
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 14/74 (18%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEV 65
+DD+I K + L D DGDG +T +E+ + + G ++ + + +
Sbjct: 1 SDDKIG-LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE-------------KVAEQVMKA 46
Query: 66 DADGNGTIDFPEFL 79
DA+G+G I EFL
Sbjct: 47 DANGDGYITLEEFL 60
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 4/125 (3%)
Query: 37 MRSLGQNPTEAEL---QDMINEAELQDMINEVDADG-NGTIDFPEFLNLMARKMKDTDSE 92
M ++ P EL Q + ELQ + + +G ++ F + ++ DS
Sbjct: 42 MATVRHRPEALELLEAQSKFTKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDST 101
Query: 93 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
F FD D NG +S + ++ L E+++ D++ DG I EE +
Sbjct: 102 TYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEML 161
Query: 153 KVMMA 157
+M A
Sbjct: 162 DIMKA 166
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRSLGQ---NPTEAELQDMINEAELQDMINEVDADGNGT 72
AF+L+D + DG IT +E+ +M+++ T L++ ++ ++D + +G
Sbjct: 143 AFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGV 202
Query: 73 IDFPEFL 79
+ EF+
Sbjct: 203 VTIDEFI 209
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDFP 76
F D +GDG ++ +E+ + ++ + + NE LQ + +DADGNG ID
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFV---------SKKRAIKNEQLLQLIFKSIDADGNGEIDQN 56
Query: 77 EF 78
EF
Sbjct: 57 EF 58
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 61 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 108
+ E+D +G+G + + E +++K + +E+ L+ F+ D D NG
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNG 51
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 134 MIREADVDGDGQINYEEFVKVMMAK 158
+ +E DV+GDG ++YEE VK ++K
Sbjct: 5 LFKEIDVNGDGAVSYEE-VKAFVSK 28
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
I ++ T FP LN + D + + F D+D++G + EL
Sbjct: 26 IYQMPPSVRNTWWFP-LLNTI-----PLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFP 79
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 154
G +L+ + M+R D D +G I++ EF+ +
Sbjct: 80 GGIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
I ++ T FP LN + D + + F D+D++G + EL
Sbjct: 26 IYQMPPSVRNTWWFP-LLNTI-----PLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFP 79
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 154
G +L+ + M+R D D +G I++ EF+ +
Sbjct: 80 GGIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 91 SEEELK-EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE------------VDEMIRE 137
S +EL+ F++ D D N + EL +T++ ++ E+ +D ++R+
Sbjct: 15 SPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRD 74
Query: 138 ADVDGDGQINYEEFVKVM 155
D + DG I+Y EF K +
Sbjct: 75 DDKNNDGYIDYAEFAKSL 92
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 91 SEEELK-EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE------------VDEMIRE 137
S +EL+ F++ D D N + EL +T++ ++ E+ +D ++R+
Sbjct: 46 SPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRD 105
Query: 138 ADVDGDGQINYEEFVKVM 155
D + DG I+Y EF K +
Sbjct: 106 DDKNNDGYIDYAEFAKSL 123
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 11/59 (18%)
Query: 21 DKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDFPEFL 79
DK+ DG I E + +LG +++AE + N+VD +GNG + E L
Sbjct: 112 DKNADGQINADEFAAWLTALG-----------MSKAEAAEAFNQVDTNGNGELSLDELL 159
Score = 29.6 bits (65), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 15/79 (18%)
Query: 91 SEEELKEAFRVFDKDQNGFISAA----ELRHVMTNLGEKLTDEEV-----------DEMI 135
+ + LK+ F +D D NG + A E +H+ G+ EV D +
Sbjct: 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLA 64
Query: 136 READVDGDGQINYEEFVKV 154
+EA V DG + E+F++V
Sbjct: 65 KEAGVGSDGSLTEEQFIRV 83
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 91 SEEELK-EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE------------VDEMIRE 137
S +EL+ F++ D D N + EL +T++ ++ E+ +D ++R+
Sbjct: 65 SPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRD 124
Query: 138 ADVDGDGQINYEEFVKVM 155
D + DG I+Y EF K +
Sbjct: 125 DDKNNDGYIDYAEFAKSL 142
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 28/30 (93%)
Query: 126 LTDEEVDEMIREADVDGDGQINYEEFVKVM 155
+T+E+++++++++D + DG+I+++EF+K+M
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 53 INEAELQDMINEVDADGNGTIDFPEFLNLM 82
+ E +++D++ + D + +G IDF EFL +M
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 23/27 (85%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMA 157
VD++++E D DGDG+++++E+V ++ A
Sbjct: 54 VDKVMKELDEDGDGEVDFQEYVVLVAA 80
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 61 MINEVDADGNGTIDFPEFLNLMA 83
++ E+D DG+G +DF E++ L+A
Sbjct: 57 VMKELDEDGDGEVDFQEYVVLVA 79
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 23/27 (85%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMA 157
VD++++E D +GDG+++++EFV ++ A
Sbjct: 54 VDKIMKELDENGDGEVDFQEFVVLVAA 80
Score = 26.2 bits (56), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 61 MINEVDADGNGTIDFPEFLNLMA 83
++ E+D +G+G +DF EF+ L+A
Sbjct: 57 IMKELDENGDGEVDFQEFVVLVA 79
>pdb|1I1S|A Chain A, Solution Structure Of The Transcriptional Activation
Domain Of The Bacteriophage T4 Protein Mota
Length = 96
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 109 FISAAELRHVMTNLGEKLTDEEVDEMIREADVD--GDGQI 146
FI+AAE+R V +LG + + + +I++ V+ GDG I
Sbjct: 31 FITAAEVREVHPDLGNAVVNSNIGVLIKKGLVEKSGDGLI 70
>pdb|1BJA|A Chain A, Activation Domain Of The Phage T4 Transcription Factor
Mota
pdb|1BJA|B Chain B, Activation Domain Of The Phage T4 Transcription Factor
Mota
Length = 95
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 109 FISAAELRHVMTNLGEKLTDEEVDEMIREADVD--GDGQI 146
FI+AAE+R V +LG + + + +I++ V+ GDG I
Sbjct: 30 FITAAEVREVHPDLGNAVVNSNIGVLIKKGLVEKSGDGLI 69
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 15/76 (19%)
Query: 91 SEEELKEAFRVFDKDQNG--------FISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 142
S EELK F +DK+ +G + E ++ + +DE+ E D +G
Sbjct: 3 SPEELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMST------LDELFEELDKNG 56
Query: 143 DGQINYEEFVKVMMAK 158
DG++++EEF +V++ K
Sbjct: 57 DGEVSFEEF-QVLVKK 71
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin I
N-Terminus
Length = 99
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 21/25 (84%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVM 155
+D M+++ D+D DGQ++++EF+ ++
Sbjct: 58 LDRMMKKLDLDSDGQLDFQEFLNLI 82
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 58 LQDMINEVDADGNGTIDFPEFLNLMA 83
L M+ ++D D +G +DF EFLNL+
Sbjct: 58 LDRMMKKLDLDSDGQLDFQEFLNLIG 83
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 107 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
NGF+S +++ V+ N KL + + + +D+D DG ++ +EF M
Sbjct: 28 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 74
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 107 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
NGF+S +++ V+ N KL + + + +D+D DG ++ +EF M
Sbjct: 23 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 69
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 107 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
NGF+S +++ V+ N KL + + + +D+D DG ++ +EF M
Sbjct: 23 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 69
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 107 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
NGF+S +++ V+ N KL + + + +D+D DG ++ +EF M
Sbjct: 28 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 74
>pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGG|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
Length = 416
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEAELQDMINEVDADGNGTIDF 75
A + +G + +LG + ++ + I A Q ++ + D G ++
Sbjct: 141 AVQMIMPNGAAAVIGLQLGARAGVMTPVSAQSSGSEAIAHAWRQIVMGDADVAVCGGVEG 200
Query: 76 P-EFLNL----MARKMKDTDSEEELKEAFRVFDKDQNGFI 110
P E L + M R M + E E A R FDKD++GF+
Sbjct: 201 PIEALPIAAFSMMRAMSTRNDEPE--RASRPFDKDRDGFV 238
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
Length = 93
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 23/27 (85%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMA 157
VD++++E D +GDG+++++E+V ++ A
Sbjct: 54 VDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 23/27 (85%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMA 157
VD++++E D +GDG+++++E+V ++ A
Sbjct: 54 VDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 23/27 (85%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMA 157
VD++++E D +GDG+++++E+V ++ A
Sbjct: 54 VDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 23/27 (85%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMA 157
VD++++E D +GDG+++++E+V ++ A
Sbjct: 54 VDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 23/27 (85%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMA 157
VD++++E D +GDG+++++E+V ++ A
Sbjct: 55 VDKVMKELDENGDGEVDFQEYVVLVAA 81
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMAK 158
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 46 LDELFEELDKNGDGEVSFEEF-QVLVKK 72
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 110 ISAAELRHVM---TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
+S EL+ ++ +G KL D E+ ++ + D + D ++N++E+V + A
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 79
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMAK 158
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 47 LDELFEELDKNGDGEVSFEEF-QVLVKK 73
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMAK 158
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 46 LDELFEELDKNGDGEVSFEEF-QVLVKK 72
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMAK 158
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 46 LDELFEELDKNGDGEVSFEEF-QVLVKK 72
>pdb|4GXT|A Chain A, The Crystal Structure Of A Conserved Functionally Unknown
Protein From Anaerococcus Prevotii Dsm 20548
Length = 385
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 81 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAE---LRHVMTNLGEKLTDEEVDEMIRE 137
L+A+ KD ++ + F VFD D I E L + + N+ K EE E+IR+
Sbjct: 24 LIAKHGKDNEAYNPDNKPFAVFDWDNTSIIGDVEEALLYYXVRNVSFKXDPEEFYELIRK 83
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 70 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 129
+G ++ F + A+ D+ F FD Q G + + ++ L E
Sbjct: 66 SGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 125
Query: 130 EVDEMIREADVDGDGQINYEEFVKVMMA 157
++ D++ DG IN EE + ++ A
Sbjct: 126 KLRWTFNLYDINKDGYINKEEMMDIVKA 153
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMAK 158
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 47 LDELFEELDKNGDGEVSFEEF-QVLVKK 73
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 70 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 129
+G ++ F + A+ D+ F FD Q G + + ++ L E
Sbjct: 30 SGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 89
Query: 130 EVDEMIREADVDGDGQINYEEFVKVMMA 157
++ D++ DG IN EE + ++ A
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVKA 117
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMAK 158
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 50 LDELFEELDKNGDGEVSFEEF-QVLVKK 76
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 21/25 (84%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVM 155
+D M+++ D++ DGQ++++EF+ ++
Sbjct: 56 LDRMMKKLDLNSDGQLDFQEFLNLI 80
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 58 LQDMINEVDADGNGTIDFPEFLNLMA 83
L M+ ++D + +G +DF EFLNL+
Sbjct: 56 LDRMMKKLDLNSDGQLDFQEFLNLIG 81
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMAK 158
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 47 LDELFEELDKNGDGEVSFEEF-QVLVKK 73
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 70 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 129
+G ++ F + A+ D+ F FD Q G + + ++ L E
Sbjct: 30 SGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 89
Query: 130 EVDEMIREADVDGDGQINYEEFVKVMMA 157
++ D++ DG IN EE + ++ A
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVKA 117
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMAK 158
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 46 LDELFEELDKNGDGEVSFEEF-QVLVKK 72
>pdb|1J55|A Chain A, The Crystal Structure Of Ca+-Bound Human S100p Determined
At 2.0a Resolution By X-Ray
Length = 95
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 20/27 (74%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMA 157
VD+++++ D +GD Q+++ EF+ + A
Sbjct: 54 VDKLLKDLDANGDAQVDFSEFIVFVAA 80
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMAK 158
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 47 LDELFEELDKNGDGEVSFEEF-QVLVKK 73
>pdb|1OZO|A Chain A, Three-Dimensional Solution Structure Of Apo-S100p Protein
Determined By Nmr Spectroscopy
pdb|1OZO|B Chain B, Three-Dimensional Solution Structure Of Apo-S100p Protein
Determined By Nmr Spectroscopy
Length = 95
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 20/27 (74%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMA 157
VD+++++ D +GD Q+++ EF+ + A
Sbjct: 54 VDKLLKDLDANGDAQVDFSEFIVFVAA 80
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase
Length = 91
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 48 ELQDMINEAELQDMINEV----DADGNGTIDFPEFLNLMA 83
EL + E + Q+++++V D+DG+G DF EF+ +A
Sbjct: 39 ELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVA 78
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 39 ELSHFLEEIKEQ---EVVDKVMETLDSDGDGECDFQEFM 74
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 48 ELQDMINEAELQDMINEV----DADGNGTIDFPEFLNLMA 83
EL + E + Q+++++V D+DG+G DF EF+ +A
Sbjct: 39 ELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVA 78
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 39 ELSHFLEEIKEQ---EVVDKVMETLDSDGDGECDFQEFM 74
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 48 ELQDMINEAELQDMINEV----DADGNGTIDFPEFLNLMA 83
EL + E + Q+++++V D+DG+G DF EF+ +A
Sbjct: 40 ELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVA 79
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 40 ELSHFLEEIKEQ---EVVDKVMETLDSDGDGECDFQEFM 75
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 48 ELQDMINEAELQDMINEV----DADGNGTIDFPEFLNLMA 83
EL + E + Q+++++V D+DG+G DF EF+ +A
Sbjct: 40 ELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVA 79
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 40 ELSHFLEEIKEQ---EVVDKVMETLDSDGDGECDFQEFM 75
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To
Sbi4211
Length = 89
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 48 ELQDMINEAELQDMINEV----DADGNGTIDFPEFLNLMA 83
EL + E + Q+++++V D+DG+G DF EF+ +A
Sbjct: 40 ELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVA 79
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 40 ELSHFLEEIKEQ---EVVDKVMETLDSDGDGECDFQEFM 75
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 70 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 129
+G ++ F + A+ D+ F FD Q G + + ++ L E
Sbjct: 33 SGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 92
Query: 130 EVDEMIREADVDGDGQINYEEFVKVMMA 157
++ D++ DG IN EE + ++ A
Sbjct: 93 KLRWTFNLYDINKDGYINKEEMMDIVKA 120
>pdb|2BRX|A Chain A, Ump Kinase From Pyrococcus Furiosus Without Ligands
pdb|2BRX|B Chain B, Ump Kinase From Pyrococcus Furiosus Without Ligands
Length = 244
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 42 QNPTEAELQDMINEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD--SEEELKEAF 99
++PT +++ M E L+ + ++ G+ ++ P ++AR T +E+ K+ F
Sbjct: 171 KDPTAKKIKKMKPEELLEIVGKGIEKAGSSSVIDPLAAKIIARSGIKTIVIGKEDAKDLF 230
Query: 100 RVFDKDQNG 108
RV D NG
Sbjct: 231 RVIKGDHNG 239
>pdb|2CCD|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCD|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 27.3 bits (59), Expect = 3.3, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 10/49 (20%)
Query: 31 KELGTVMRSLG----------QNPTEAELQDMINEAELQDMINEVDADG 69
+++G V R LG Q+P A D++ EAE+ + +++ A G
Sbjct: 418 RDMGPVARYLGPLVPKQTLLWQDPVPAVSHDLVGEAEIASLKSQIRASG 466
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMAK 158
+D++ +E D +GDG++++EEF +V++ K
Sbjct: 49 LDDLFQELDKNGDGEVSFEEF-QVLVKK 75
>pdb|2CCA|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCA|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 27.3 bits (59), Expect = 3.3, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 10/49 (20%)
Query: 31 KELGTVMRSLG----------QNPTEAELQDMINEAELQDMINEVDADG 69
+++G V R LG Q+P A D++ EAE+ + +++ A G
Sbjct: 418 RDMGPVARYLGPLVPKQTLLWQDPVPAVSHDLVGEAEIASLKSQIRASG 466
>pdb|1SJ2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
pdb|1SJ2|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
Length = 743
Score = 27.3 bits (59), Expect = 3.3, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 10/49 (20%)
Query: 31 KELGTVMRSLG----------QNPTEAELQDMINEAELQDMINEVDADG 69
+++G V R LG Q+P A D++ EAE+ + +++ A G
Sbjct: 421 RDMGPVARYLGPLVPKQTLLWQDPVPAVSHDLVGEAEIASLKSQIRASG 469
>pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or Apo) Human S100a6;
Cys3met Mutant (Selenomethionine Derivative)
Length = 90
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 110 ISAAELRHVM---TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
+S EL+ ++ +G KL D E+ + + D + D ++N++E+V + A
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIARLXEDLDRNKDQEVNFQEYVTFLGA 79
>pdb|2JI5|A Chain A, Structure Of Ump Kinase From Pyrococcus Furiosus Complexed
With Utp
pdb|2JI5|B Chain B, Structure Of Ump Kinase From Pyrococcus Furiosus Complexed
With Utp
Length = 227
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 42 QNPTEAELQDMINEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD--SEEELKEAF 99
++PT +++ M E L+ + ++ G+ ++ P ++AR T +E+ K+ F
Sbjct: 154 KDPTAKKIKKMKPEELLEIVGKGIEKAGSSSVIDPLAAKIIARTGIKTIVIGKEDAKDLF 213
Query: 100 RVFDKDQNG 108
RV D NG
Sbjct: 214 RVIKGDHNG 222
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 131 VDEMIREADVDGDGQINYEEFVKVMMAK 158
+DE+ E D GDG++++EEF +V++ K
Sbjct: 46 LDELFEELDKAGDGEVSFEEF-QVLVKK 72
>pdb|1A03|A Chain A, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1A03|B Chain B, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1CNP|A Chain A, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1CNP|B Chain B, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1JWD|A Chain A, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|1JWD|B Chain B, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|2CNP|A Chain A, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2CNP|B Chain B, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2JTT|A Chain A, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
pdb|2JTT|B Chain B, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
Length = 90
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 110 ISAAELRHVM---TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 157
+S EL+ ++ +G KL D E+ +++ + D + D ++N++E++ + A
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIVKLMDDLDRNKDQEVNFQEYITFLGA 79
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 62 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 121
++D + NGT+ EF R D S ++ FR D+D++ + +E H
Sbjct: 194 FRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQD--ALFRYADEDESDDVGFSEYVH---- 247
Query: 122 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 155
LG L + + AD D GQ++ EE KV+
Sbjct: 248 LGLCLLVLRI--LYAFADFDKSGQLSKEEVQKVL 279
>pdb|1C07|A Chain A, Structure Of The Third Eps15 Homology Domain Of Human
Eps15
Length = 95
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 97 EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 151
E F DKD +GF+S E+R + G L + + D G+++ ++F
Sbjct: 14 EIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQF 66
>pdb|2OSR|A Chain A, Nmr Structure Of Rrm-2 Of Yeast Npl3 Protein
Length = 87
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 28 ITTKELGTVMRSLGQNPTEAELQDMINEAELQ---DMINEVDADGNGTIDFP 76
+ K M++L + + +L+D+ E L+ +N D DG G ++FP
Sbjct: 2 LPAKRYRITMKNLPEGCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFP 53
>pdb|1SP9|A Chain A, 4-hydroxyphenylpyruvate Dioxygenase
pdb|1SP9|B Chain B, 4-hydroxyphenylpyruvate Dioxygenase
Length = 445
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPT 45
+ D L+DDQI E +E L D+D G + L + LG PT
Sbjct: 350 VGDVLSDDQIKECEELGILVDRDDQGTL----LQIFTKPLGDRPT 390
>pdb|2JVR|A Chain A, Segmental Isotope Labeling Of Npl3p
Length = 111
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 28 ITTKELGTVMRSLGQNPTEAELQDMINEAELQ---DMINEVDADGNGTIDFP 76
+ K M++L + + +L+D+ E L+ +N D DG G ++FP
Sbjct: 24 LPAKRYRITMKNLPEGCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFP 75
>pdb|1J7Q|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
pdb|1J7R|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
Length = 86
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 92 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA-DVDGDGQ-INYE 149
++E + F +FD++ ++ ++T LG+ T E + +++EA GD + I E
Sbjct: 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE 72
Query: 150 EFV 152
E++
Sbjct: 73 EWL 75
>pdb|1SQD|A Chain A, Structural Basis For Inhibitor Selectivity Revealed By
Crystal Structures Of Plant And Mammalian 4-
Hydroxyphenylpyruvate Dioxygenases
pdb|1TFZ|A Chain A, Structural Basis For Herbicidal Inhibitor Selectivity
Revealed By Comparison Of Crystal Structures Of Plant
And Mammalian 4- Hydroxyphenylpyruvate Dioxygenases
pdb|1TG5|A Chain A, Crystal Structures Of Plant 4-Hydroxyphenylpyruvate
Dioxygenases Complexed With Das645
Length = 424
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPT 45
+ D L+DDQI E +E L D+D G + L + LG PT
Sbjct: 329 VGDVLSDDQIKECEELGILVDRDDQGTL----LQIFTKPLGDRPT 369
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 39 ELSHFLEEIKEQ---EVVDKVMETLDEDGDGECDFQEFM 74
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 40 ELSHFLEEIKEQ---EVVDKVMETLDEDGDGECDFQEFM 75
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 48 ELQDMINEAELQDMINEV----DADGNGTIDFPEFLNLMA 83
EL + E + Q+++++V D DG+G DF EF+ +A
Sbjct: 39 ELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQEFMAFVA 78
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 39 ELSHFLEEIKEQ---EVVDKVMETLDNDGDGECDFQEFM 74
>pdb|2H61|A Chain A, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|B Chain B, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|E Chain E, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|F Chain F, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|H Chain H, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3CZT|X Chain X, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 9
pdb|3D0Y|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
pdb|3D10|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3D10|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3HCM|A Chain A, Crystal Structure Of Human S100b In Complex With S45
pdb|3HCM|B Chain B, Crystal Structure Of Human S100b In Complex With S45
Length = 92
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 40 ELSHFLEEIKEQ---EVVDKVMETLDNDGDGECDFQEFM 75
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 48 ELQDMINEAELQDMINEV----DADGNGTIDFPEFLNLMA 83
EL + E + Q+++++V D DG+G DF EF+ +A
Sbjct: 40 ELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQEFMAFVA 79
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 6.5
Length = 92
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 48 ELQDMINEAELQDMINEV----DADGNGTIDFPEFLNLMA 83
EL + E + Q+++++V D DG+G DF EF+ +A
Sbjct: 40 ELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQEFMAFVA 79
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 114 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 152
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 40 ELSHFLEEIKEQ---EVVDKVMETLDNDGDGECDFQEFM 75
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 26.2 bits (56), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 48 ELQDMINEAELQDMINEV----DADGNGTIDFPEFLNLMA 83
EL + E + Q+++++V D++G+G DF EF+ +A
Sbjct: 40 ELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVA 79
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.132 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,704,427
Number of Sequences: 62578
Number of extensions: 193571
Number of successful extensions: 2252
Number of sequences better than 100.0: 425
Number of HSP's better than 100.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 543
Number of HSP's gapped (non-prelim): 817
length of query: 158
length of database: 14,973,337
effective HSP length: 91
effective length of query: 67
effective length of database: 9,278,739
effective search space: 621675513
effective search space used: 621675513
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.7 bits)