Query 031538
Match_columns 158
No_of_seqs 130 out of 1075
Neff 8.4
Searched_HMMs 29240
Date Tue Mar 26 01:08:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031538.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031538hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dm5_A Annexin XII E105K mutan 100.0 3.2E-45 1.1E-49 291.1 18.0 157 1-158 3-159 (315)
2 1n00_A Annexin GH1; membrane-b 100.0 4.2E-45 1.4E-49 291.1 18.2 158 1-158 6-163 (321)
3 2zhj_A Annexin A4; zynogen gra 100.0 9.6E-45 3.3E-49 289.1 19.0 156 1-157 8-163 (322)
4 1yii_A Annexin A5, annexin V, 100.0 9.2E-45 3.2E-49 289.1 18.7 157 1-158 5-161 (320)
5 1hm6_A Annexin 1; phospholipid 100.0 1.1E-44 3.9E-49 290.8 19.3 155 1-156 33-187 (346)
6 1axn_A Annexin III; annexin fa 100.0 2.3E-44 7.8E-49 287.0 19.0 155 1-156 9-163 (323)
7 1w3w_A Annexin A8; coagulation 100.0 2.3E-44 8E-49 287.3 18.1 154 5-158 15-168 (327)
8 2hyv_A Annexin A2; calcium-bin 100.0 8.3E-43 2.9E-47 276.4 18.3 147 10-156 1-147 (308)
9 1m9i_A Annexin VI; calcium-bin 100.0 5.3E-42 1.8E-46 294.3 19.0 156 1-157 353-508 (672)
10 1m9i_A Annexin VI; calcium-bin 100.0 6E-42 2.1E-46 294.0 19.1 156 1-157 10-165 (672)
11 2zhj_A Annexin A4; zynogen gra 100.0 3E-40 1E-44 263.2 16.0 148 11-158 89-248 (322)
12 1axn_A Annexin III; annexin fa 100.0 7.4E-40 2.5E-44 261.0 16.7 148 11-158 90-249 (323)
13 3chj_A Alpha-14 giardin; calci 100.0 3.1E-40 1.1E-44 264.2 13.8 154 1-156 1-156 (337)
14 4evf_A Alpha-1 giardin, giardi 100.0 1.6E-39 5.4E-44 256.3 16.5 145 11-158 2-149 (295)
15 1w3w_A Annexin A8; coagulation 100.0 7.3E-40 2.5E-44 261.3 13.5 144 12-155 178-325 (327)
16 1dm5_A Annexin XII E105K mutan 100.0 5.5E-40 1.9E-44 261.0 12.6 144 12-155 168-315 (315)
17 1yii_A Annexin A5, annexin V, 100.0 1.8E-39 6.3E-44 258.5 15.3 148 11-158 86-245 (320)
18 2hyv_A Annexin A2; calcium-bin 100.0 5.2E-39 1.8E-43 254.6 16.8 148 11-158 74-234 (308)
19 1hm6_A Annexin 1; phospholipid 100.0 1.8E-39 6.3E-44 260.6 13.4 149 10-158 113-273 (346)
20 1n00_A Annexin GH1; membrane-b 100.0 9.5E-40 3.2E-44 260.2 10.7 145 13-158 173-321 (321)
21 2ii2_A Alpha-11 giardin; helix 100.0 1.5E-38 5.2E-43 252.2 15.1 143 12-157 5-150 (310)
22 2ii2_A Alpha-11 giardin; helix 100.0 4.3E-37 1.5E-41 243.9 17.5 147 11-158 75-231 (310)
23 4evf_A Alpha-1 giardin, giardi 100.0 4.7E-37 1.6E-41 242.2 17.1 146 10-158 72-226 (295)
24 3chj_A Alpha-14 giardin; calci 100.0 1.5E-35 5.2E-40 237.1 15.2 148 11-158 81-242 (337)
25 1r4t_A Exoenzyme S; EXOS, GAP, 70.2 4.2 0.00014 28.0 3.3 47 25-71 90-138 (153)
26 1he1_A Exoenzyme S, EXOS; sign 53.9 9.7 0.00033 25.7 2.7 42 27-68 90-133 (135)
27 1mty_G Methane monooxygenase h 47.0 61 0.0021 22.4 5.9 97 35-133 14-119 (162)
28 2llk_A Cyclin-D-binding MYB-li 45.4 47 0.0016 19.8 4.8 39 8-48 23-61 (73)
29 1mhy_G Methane monooxygenase h 45.4 56 0.0019 22.7 5.6 97 35-133 18-123 (169)
30 2cu7_A KIAA1915 protein; nucle 45.0 45 0.0015 19.5 6.4 45 9-54 10-54 (72)
31 2iw5_B Protein corest, REST co 44.3 28 0.00095 25.9 4.1 44 15-58 139-182 (235)
32 3t72_q RNA polymerase sigma fa 43.2 60 0.002 20.4 6.0 79 33-112 12-96 (99)
33 1x41_A Transcriptional adaptor 41.8 46 0.0016 18.7 5.9 39 9-48 9-48 (60)
34 2yus_A SWI/SNF-related matrix- 39.5 62 0.0021 19.5 5.1 45 9-57 19-63 (79)
35 1j2j_B ADP-ribosylation factor 39.4 47 0.0016 18.1 4.0 28 33-60 12-39 (45)
36 3frr_A Uncharacterized protein 39.1 64 0.0022 23.1 5.3 41 41-81 114-155 (191)
37 1guu_A C-MYB, MYB proto-oncoge 36.8 51 0.0017 17.7 4.8 38 10-48 5-43 (52)
38 2dim_A Cell division cycle 5-l 35.1 66 0.0023 18.5 5.0 39 9-48 10-49 (70)
39 2d9a_A B-MYB, MYB-related prot 33.3 65 0.0022 17.9 5.1 40 8-48 8-48 (60)
40 3fke_A Polymerase cofactor VP3 31.0 42 0.0014 22.0 2.9 44 85-128 10-55 (129)
41 3ks4_A Polymerase cofactor VP3 31.0 51 0.0017 23.0 3.5 55 85-139 65-123 (184)
42 1r8s_E ARNO; protein transport 30.4 1.5E+02 0.0052 21.3 6.8 53 11-67 42-97 (203)
43 3osg_A MYB21; transcription-DN 29.7 1.2E+02 0.004 19.7 8.3 105 10-136 13-117 (126)
44 3fxd_A Protein ICMQ; helix bun 28.6 66 0.0022 18.3 3.1 38 18-59 15-52 (57)
45 2yum_A ZZZ3 protein, zinc fing 28.4 92 0.0032 18.1 5.1 40 9-49 9-54 (75)
46 2r09_A Cytohesin-3; autoinhibi 28.1 1.9E+02 0.0066 22.2 6.9 54 11-68 44-100 (347)
47 2z16_A Matrix protein 1, M1; A 27.2 39 0.0013 23.1 2.4 27 15-41 30-56 (165)
48 1zav_U 50S ribosomal protein L 27.0 63 0.0022 15.8 3.5 28 31-58 3-30 (30)
49 1dd4_C 50S ribosomal protein L 26.5 77 0.0026 16.6 3.5 30 31-60 3-32 (40)
50 2elk_A SPCC24B10.08C protein; 25.6 93 0.0032 17.2 6.8 39 9-48 10-50 (58)
51 4afi_A AP-3 complex subunit de 25.5 24 0.00081 24.9 1.1 39 117-155 131-169 (173)
52 1gvd_A MYB proto-oncogene prot 25.5 85 0.0029 16.8 3.7 38 10-48 5-43 (52)
53 2pm7_A Protein WEB1, protein t 25.0 1.9E+02 0.0065 23.0 6.5 34 60-93 145-179 (399)
54 2iw5_B Protein corest, REST co 24.8 53 0.0018 24.4 2.9 50 86-137 138-187 (235)
55 3frr_A Uncharacterized protein 22.1 39 0.0013 24.3 1.7 25 116-140 117-141 (191)
56 2xag_B REST corepressor 1; ami 21.4 1.1E+02 0.0038 25.2 4.5 45 14-58 385-429 (482)
57 3sjm_A Telomeric repeat-bindin 21.3 1.3E+02 0.0043 17.2 4.6 39 9-48 12-53 (64)
58 3m03_A ORC6, origin recognitio 21.3 1.6E+02 0.0056 18.5 6.4 47 9-56 42-90 (95)
59 2jr2_A UPF0352 protein CPS_261 20.8 1.5E+02 0.0051 17.9 4.3 30 34-63 41-70 (76)
60 2ltp_A Nuclear receptor corepr 24.8 23 0.00079 21.9 0.0 45 11-56 19-63 (89)
No 1
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent hexamerization switch E76, low calcium form; 1.93A {Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Probab=100.00 E-value=3.2e-45 Score=291.13 Aligned_cols=157 Identities=34% Similarity=0.478 Sum_probs=152.7
Q ss_pred CccccCCCCCCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhh
Q 031538 1 MATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLW 80 (158)
Q Consensus 1 ~~~~~~~~~~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~ 80 (158)
|+|+. |.++|+|+.||+.|++|++|+||||.+||+||++||++|+++|+++|+..||++|+++|++++||+|++++++|
T Consensus 3 ~~ti~-~~~~~~~~~DA~~L~~A~kG~Gtde~~lieIL~~rs~~q~~~I~~~Y~~~yg~~L~~dl~se~sG~f~~ll~~l 81 (315)
T 1dm5_A 3 QGTVK-PHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALAL 81 (315)
T ss_dssp CCSCC-CCTTCCHHHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHH
T ss_pred CCCCC-CCCCCCHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCCCHHHHHHhhcCccHHHHHHHH
Confidence 67884 77789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhcC
Q 031538 81 TLTPAERDAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLVN 158 (158)
Q Consensus 81 ~~~~~~~~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~~ 158 (158)
+.+|+++||..|++|++|+|||+++|++|||+||+.|+.+|+++|++.||++|+++|++++||+|+++|++|+++.+|
T Consensus 82 ~~~~~~~dA~~L~~A~kg~Gtde~~lieIL~tRs~~ql~~i~~~Y~~~yg~~Le~dI~~e~sG~~~~~L~~lv~~~r~ 159 (315)
T 1dm5_A 82 LRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRK 159 (315)
T ss_dssp HSCHHHHHHHHHHHHHHSSSCCHHHHHHHHSSCCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHTTCCC
T ss_pred ccChhHHHHHHHHHHhhcCCCchhhhhhhHhcCCHHHHHHHHHHHHHHhCccHHHHHHhccCchHHHHHHHHHccccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998764
No 2
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=100.00 E-value=4.2e-45 Score=291.12 Aligned_cols=158 Identities=72% Similarity=1.022 Sum_probs=155.0
Q ss_pred CccccCCCCCCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhh
Q 031538 1 MATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLW 80 (158)
Q Consensus 1 ~~~~~~~~~~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~ 80 (158)
|+|+++|.+.|+++.||+.|++|++|+||||.+||+||++||++|+++|.++|+..||++|+++|++++||+|++++++|
T Consensus 6 ~~t~~~~~~~~~~~~DA~~L~~A~kG~Gtde~~lieIL~~rs~~q~~~I~~aY~~~y~~~L~~dl~se~sG~f~~ll~~l 85 (321)
T 1n00_A 6 HATLTVPTTVPSVSEDCEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYAETYGEDLLKALDKELSNDFERLVLLW 85 (321)
T ss_dssp CCCCCCCSSCCCHHHHHHHHHHHTSSSSCCHHHHHHHHTTCCHHHHHHHHHHHHHHHSSCHHHHHHHHSCHHHHHHHHHH
T ss_pred CCCeeecCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhhHHHHHHHHhcCchHHHHHHHH
Confidence 68898999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhcC
Q 031538 81 TLTPAERDAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLVN 158 (158)
Q Consensus 81 ~~~~~~~~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~~ 158 (158)
+.+|+.+||..|++|++|+|||+.+|++|||+||+.|+.+|+++|++.||++|+++|++++||+|+++|++|+++.+|
T Consensus 86 ~~~~~~~dA~~l~~A~kg~Gtde~~lieIL~tRs~~ql~~i~~~Y~~~~g~~Le~dI~~e~sG~~~~~L~~lv~~~r~ 163 (321)
T 1n00_A 86 ALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYHARYKKSLEEDVAHHTTGDFHKLLLPLVSSYRY 163 (321)
T ss_dssp HSCHHHHHHHHHHHHHSSSCSSCHHHHHHHHSSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHHCCCC
T ss_pred cCChhHHHHHHHHHHhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCccHHHHHHhccCcHHHHHHHHHHhcccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998765
No 3
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=100.00 E-value=9.6e-45 Score=289.14 Aligned_cols=156 Identities=37% Similarity=0.446 Sum_probs=151.5
Q ss_pred CccccCCCCCCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhh
Q 031538 1 MATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLW 80 (158)
Q Consensus 1 ~~~~~~~~~~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~ 80 (158)
|+|+ +|.++|+|+.||+.|++|++|+||||..|++||++||++|+++|..+|+..||++|.++|++++||+|++++++|
T Consensus 8 ~~t~-~~~~~~~~~~Da~~L~kA~kG~GtdE~~li~IL~~rs~~qr~~I~~~Y~~~~g~~L~~~lkselsG~fe~~l~~l 86 (322)
T 2zhj_A 8 GGTV-KAASGFNATEDAQVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLEDLKSELSSNFEQVILGM 86 (322)
T ss_dssp SCSC-CCCTTCCHHHHHHHHHHHHSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHCSCHHHHHHHHCCHHHHHHHHHH
T ss_pred CCCc-CCCCCCCHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCchHHHHHHhhcCccHHHHHHHH
Confidence 6777 477789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhc
Q 031538 81 TLTPAERDAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLV 157 (158)
Q Consensus 81 ~~~~~~~~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~ 157 (158)
+.+|+++||..|++|++|+|||+.+|++|||+|++.|+.+|+++|++.||++|+++|++++||+|+++|++|+++.+
T Consensus 87 ~~~~~~~DA~~L~~A~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~di~~e~sG~~~~~l~~ll~~~r 163 (322)
T 2zhj_A 87 MTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIRRINQTYQQQYGRSLEEDICSDTSFMFQRVLVSLTAGGR 163 (322)
T ss_dssp HSCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHHCCC
T ss_pred cCCcHHHHHHHHHHhhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCccHHHHHHhhcCchHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998754
No 4
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=100.00 E-value=9.2e-45 Score=289.05 Aligned_cols=157 Identities=30% Similarity=0.408 Sum_probs=152.2
Q ss_pred CccccCCCCCCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhh
Q 031538 1 MATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLW 80 (158)
Q Consensus 1 ~~~~~~~~~~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~ 80 (158)
|+|+ +|.+.|+++.||+.|++|++|+||||.+|++||++||++|+++|+++|+..||++|+++|++++||+|++++++|
T Consensus 5 ~~ti-~~~~~~~~~~Da~~L~~A~kG~Gtde~~lieIL~~rs~~q~~~I~~~Y~~~~g~~L~~dl~~e~sG~f~~ll~~l 83 (320)
T 1yii_A 5 RGTV-TAFSPFDARADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVDDLKSELTGKFETLMVSL 83 (320)
T ss_dssp CCSC-CCCSSCCHHHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSCCHHHHHHHHCCHHHHHHHHHH
T ss_pred CCcc-ccCCCCCHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCcCHHHHHhhhcCchHHHHHHHH
Confidence 6777 477779999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhcC
Q 031538 81 TLTPAERDAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLVN 158 (158)
Q Consensus 81 ~~~~~~~~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~~ 158 (158)
+.+|+++||..|++|++|+|||+.+|++||++||+.|+.+|+++|++.||++|+++|++++||+|+++|++|+++.++
T Consensus 84 ~~~~~~~DA~~L~~A~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~di~~e~sG~~~~~l~~l~~~~r~ 161 (320)
T 1yii_A 84 MRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEANLEDKITGETSGHFQRLLVVLLQANRD 161 (320)
T ss_dssp HSCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHTTCCC
T ss_pred ccChHHHHHHHHHHHhccCCCchHHHhHHHhcCCHHHHHHHHHHHHHhhCcCHHHHHHhhcCCcHHHHHHHHHhhccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999997653
No 5
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form, FULL-length protein comprising protein core and N-terminal domain, metal; 1.80A {Sus scrofa} SCOP: a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Probab=100.00 E-value=1.1e-44 Score=290.78 Aligned_cols=155 Identities=33% Similarity=0.421 Sum_probs=151.0
Q ss_pred CccccCCCCCCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhh
Q 031538 1 MATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLW 80 (158)
Q Consensus 1 ~~~~~~~~~~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~ 80 (158)
|+|+ +|.++|+|..||+.|++|++|+||||.+||+||++||++|++.|+.+|+..||++|.++|++++||+|++++++|
T Consensus 33 ~~ti-~~~~~f~~~~Da~~L~kA~kg~GtDE~~iI~IL~~rs~~Qr~~I~~~Y~~~~g~dL~~~lkselsG~fe~~l~~l 111 (346)
T 1hm6_A 33 GSAV-SPYPTFNPSSDVEALHKAITVKGVDEATIIEILTKRTNAQRQQIKAAYLQEKGKPLDEALKKALTGHLEEVALAL 111 (346)
T ss_dssp SCSC-CCCSSCCHHHHHHHHHHHHSSTTCCHHHHHHHHHTSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHH
T ss_pred CCcc-CCCCCCCHHHHHHHHHHhccCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCccHHHHHHHhcCccHHHHHHHH
Confidence 6777 577889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhh
Q 031538 81 TLTPAERDAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSL 156 (158)
Q Consensus 81 ~~~~~~~~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~ 156 (158)
+.+|+++||+.|++||+|.|||+.+||+|||+|++.|+..|+++|++.||++|+++|++++||+|+++|++|+.+.
T Consensus 112 ~~~p~~~DA~~L~~AmkG~GTde~~LieIL~~Rsn~q~~~Ik~aY~~~y~~~Le~di~se~sG~f~~ll~~L~~~~ 187 (346)
T 1hm6_A 112 LKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINRVYKEELKRDLAKDITSDTSGDYQKALLSLAKGD 187 (346)
T ss_dssp HSCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHTSCCCHHHHHHHHCCHHHHHHHHHHHTTC
T ss_pred hCCcHHHHHHHHHHHhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhchhHHHHHhhccCCcHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999864
No 6
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Probab=100.00 E-value=2.3e-44 Score=287.03 Aligned_cols=155 Identities=37% Similarity=0.502 Sum_probs=150.7
Q ss_pred CccccCCCCCCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhh
Q 031538 1 MATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLW 80 (158)
Q Consensus 1 ~~~~~~~~~~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~ 80 (158)
|+|+. |.++|+|..||+.|++|++|+||||..||+||++||++|+++|+.+|+..||++|.++|++++||+|++++++|
T Consensus 9 ~~ti~-~~~~f~~~~Da~~L~kA~kG~Gtde~~li~IL~~rs~~qr~~I~~~Y~~~~g~dL~~~lk~elsG~fe~~l~~l 87 (323)
T 1axn_A 9 RGTVR-DYPDFSPSVDAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHLMVAL 87 (323)
T ss_dssp SCSCC-CCTTCCHHHHHHHHHHHHSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSCCHHHHHHHHCCHHHHHHHHHH
T ss_pred CCccc-CCCCCCHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCcCHHHHHhhhcCccHHHHHHHH
Confidence 67775 66779999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhh
Q 031538 81 TLTPAERDAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSL 156 (158)
Q Consensus 81 ~~~~~~~~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~ 156 (158)
+.+|+.+||..|++||+|+|||+.+||+|||+|++.|+.+|+++|++.||++|+++|++++||+|+++|++|+.+.
T Consensus 88 ~~~p~~~DA~~L~~A~kG~Gtde~~lieIL~~Rs~~q~~~I~~aY~~~y~~~Le~di~se~sG~~~~ll~~l~~~~ 163 (323)
T 1axn_A 88 VTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLADGR 163 (323)
T ss_dssp HSCHHHHHHHHHHHHHCSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHTTC
T ss_pred hcCchHHHHHHHHHHhccCCCCHHHHhHHhcCCCHHHHHHHHHHHHHhhCcCHHHHHHHhcCcHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999864
No 7
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=100.00 E-value=2.3e-44 Score=287.26 Aligned_cols=154 Identities=32% Similarity=0.448 Sum_probs=149.2
Q ss_pred cCCCCCCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhhcCCC
Q 031538 5 KVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTP 84 (158)
Q Consensus 5 ~~~~~~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~~~~~ 84 (158)
++|.++|+|+.||+.|++|++|+||||.+||+||++||++|+++|+++|+..||++|+++|++++||+|++++++|+.+|
T Consensus 15 i~~~~~f~~~~DA~~L~kA~kG~GtdE~~lieIL~~Rs~~q~~~I~~aY~~~yg~~L~~dlkse~sG~f~~ll~~l~~~~ 94 (327)
T 1w3w_A 15 VKSSSHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAKSFKAQFGKDLTETLKSELSGKFERLIVALMYPP 94 (327)
T ss_dssp --CTTSCCCHHHHHHHHHHHSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHSCT
T ss_pred ecCCCCCCHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCcCHHHHHHHHcCCcHHHHHHHhcCCH
Confidence 35888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhcC
Q 031538 85 AERDAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLVN 158 (158)
Q Consensus 85 ~~~~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~~ 158 (158)
+++||..|++|++|+|||+++|++|||+||+.|+.+|+++|++.||++|+++|++++||+|+++|++|+++.+|
T Consensus 95 ~~~DA~~L~~A~~g~Gtde~~lieIL~tRs~~ql~~i~~~Y~~~yg~sLe~dI~~e~sG~~~~~L~~lv~~~r~ 168 (327)
T 1w3w_A 95 YRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEEDYGSSLEEDIQADTSGYLERILVCLLQGSRD 168 (327)
T ss_dssp THHHHHHHHHHHHSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHHhhccCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCccHHHHHhhccCchHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998764
No 8
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein, helix BUN heparin, hexasaccharide, metal binding protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB: 2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Probab=100.00 E-value=8.3e-43 Score=276.41 Aligned_cols=147 Identities=32% Similarity=0.442 Sum_probs=144.3
Q ss_pred CCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhhcCCChhHHH
Q 031538 10 TPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDA 89 (158)
Q Consensus 10 ~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~~~~~~~~~a 89 (158)
+|+|..||+.|++|++|+||||.+||+||++||++|++.|+.+|+..||++|.++|++++||+|++++++|+.+|+.+||
T Consensus 1 ~f~~~~Da~~L~kA~kg~Gtde~~ii~IL~~rs~~qr~~I~~~Y~~~~g~dL~~~lk~elsG~fe~~l~~l~~~~~~~DA 80 (308)
T 2hyv_A 1 NFDAERDALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALSGHLETVILGLLKTPAQYDA 80 (308)
T ss_dssp CCCHHHHHHHHHHHHHSTTCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHSCHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCccHHHHHHHHcCCCHHHHHHHHcCCcHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhh
Q 031538 90 YLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSL 156 (158)
Q Consensus 90 ~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~ 156 (158)
..|++||+|.|||+.+||+|||+|++.|+..|+++|++.||++|+++|++++||+|+++|++|+.+.
T Consensus 81 ~~L~~AmkG~Gtde~~LieIL~~Rs~~q~~~Ik~aY~~~y~~~L~~di~se~sG~f~~ll~~l~~~~ 147 (308)
T 2hyv_A 81 SELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGR 147 (308)
T ss_dssp HHHHHHTSTTCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHSSCHHHHHHHTCCHHHHHHHHHHHTCC
T ss_pred HHHHHHhhcCCCCHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCHHHHHhhccCccHHHHHHHHHccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999764
No 9
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=100.00 E-value=5.3e-42 Score=294.33 Aligned_cols=156 Identities=33% Similarity=0.517 Sum_probs=151.4
Q ss_pred CccccCCCCCCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhh
Q 031538 1 MATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLW 80 (158)
Q Consensus 1 ~~~~~~~~~~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~ 80 (158)
|+|+ +|.++|+|..||+.|++|++|+||||.+||+||++||++|++.|..+|+..||++|.++|++++||+|++++++|
T Consensus 353 ~~ti-~~~~~f~~~~Da~~L~kA~kG~GtDE~~iI~IL~~rs~~QR~~I~~~Y~~~~gkdL~~~LkselsG~fe~~i~~l 431 (672)
T 1m9i_A 353 KGDV-RPANDFNPDADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRDLMTDLKSEISGDLARLILGL 431 (672)
T ss_dssp CCSC-CCCTTCCHHHHHHHHHHHHSSSSCCHHHHHHHHHTSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCTHHHHHHHHH
T ss_pred CCCc-CCCCCCChHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCchHHHHHHHHcCCCHHHHHHHH
Confidence 5677 477889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhc
Q 031538 81 TLTPAERDAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLV 157 (158)
Q Consensus 81 ~~~~~~~~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~ 157 (158)
+.+|+++||..|++||+|.|||+++|++|||+|++.|+.+|+++|+..||++|+++|.+++||+|+++|++|+++.+
T Consensus 432 ~~~p~~~DA~~l~~A~kg~gTde~~LiEIL~tRsn~ei~~ik~aY~~~y~~sLe~di~~dtsG~~~~llv~L~~~~R 508 (672)
T 1m9i_A 432 MMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIRAINEAYKEDYHKSLEDALSSDTSGHFRRILISLATGHR 508 (672)
T ss_dssp HSCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHTTCCC
T ss_pred CCCHHHHHHHHHHHHHhccCCCHHHHHHhhhcCCHHHHHHHHHHHHHHHCcCHHHHHHhccchHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998754
No 10
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=100.00 E-value=6e-42 Score=293.97 Aligned_cols=156 Identities=27% Similarity=0.416 Sum_probs=151.7
Q ss_pred CccccCCCCCCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhh
Q 031538 1 MATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLW 80 (158)
Q Consensus 1 ~~~~~~~~~~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~ 80 (158)
|+|+ +|.++|+|..||+.|++|++|+||||.+||+||++||++|++.|..+|+..||++|.++|++++||+|++++++|
T Consensus 10 ~~ti-~~~~~f~~~~Da~~L~kA~kG~GtDE~~iI~IL~~rs~~QR~~I~~~Y~~~~gkdL~~~LkselsG~fe~~l~~l 88 (672)
T 1m9i_A 10 RGSI-HDFPGFDPNQDAEALYTAMKGFGSDKEAILDIITSRSNRQRQEVCQSYKSLYGKDLIADLKYELTGKFERLIVGL 88 (672)
T ss_dssp CCSS-CSCCSCCHHHHHHHHHHHTSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHH
T ss_pred CCcc-CCCCCCChHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCCcHHHHHHHHcCCCHHHHHHHH
Confidence 6777 488889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhc
Q 031538 81 TLTPAERDAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLV 157 (158)
Q Consensus 81 ~~~~~~~~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~ 157 (158)
+.+|+++||..|++||+|.|||+.+||+|+|+|+|.||..|+++|+..||++|+++|.+++||+|+++|++|+++.+
T Consensus 89 ~~~p~~~dA~~l~~A~kG~gTde~~LiEIl~tRsn~ei~~ik~aY~~~y~~sLe~di~~dtsG~f~klLv~L~~~~R 165 (672)
T 1m9i_A 89 MRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQMHQLVAAYKDAYERDLEADIIGDTSGHFQKMLVVLLQGTR 165 (672)
T ss_dssp HSCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHCCHHHHHHHHHHHHHHSCSCHHHHHHHHCCHHHHHHHHHHHHCCC
T ss_pred cCCHHHHHHHHHHHHhcCCCCchHHHHHHHHcCCHHHHHHHHHHHHHHhCcchHHHHhccCCccHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998743
No 11
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=100.00 E-value=3e-40 Score=263.19 Aligned_cols=148 Identities=28% Similarity=0.441 Sum_probs=143.1
Q ss_pred CCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhhcC--------
Q 031538 11 PSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTL-------- 82 (158)
Q Consensus 11 ~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~~~-------- 82 (158)
++++.||+.|++|++|+||||.+|++||++||++|+++|+++|++.||++|+++|++++||+|++++++|+.
T Consensus 89 ~~~~~DA~~L~~A~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~di~~e~sG~~~~~l~~ll~~~r~e~~~ 168 (322)
T 2zhj_A 89 PTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIRRINQTYQQQYGRSLEEDICSDTSFMFQRVLVSLTAGGRDEGNY 168 (322)
T ss_dssp CHHHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHHCCCCCSCC
T ss_pred CcHHHHHHHHHHhhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCccHHHHHHhhcCchHHHHHHHHHhhccccccc
Confidence 578999999999999999999999999999999999999999999999999999999999999999998885
Q ss_pred ---CChhHHHHHHHhhh-ccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhcC
Q 031538 83 ---TPAERDAYLANEAT-KRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLVN 158 (158)
Q Consensus 83 ---~~~~~~a~~l~~a~-~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~~ 158 (158)
+++.+||..|++|+ +|+|||++.+++||++||+.||.+|+++|++.||++|+++|++++||+|+++|++++++.+|
T Consensus 169 vd~~~a~~dA~~L~~A~~~~~Gtde~~li~Il~~Rs~~~L~~i~~~Y~~~~g~~Le~~I~~e~sGd~~~~Llalv~~~~~ 248 (322)
T 2zhj_A 169 LDDALVKQDAQDLYEAGEKRWGTDEVKFLSILCSRNRNHLLHVFDEYKRISQKDIEQSIKSETSGSFEDALLAIVKCMRN 248 (322)
T ss_dssp CCHHHHHHHHHHHHHHTTTSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_pred cCCCHHHHHHHHHHHhhhcCCCCchHHHhHhHHhCCHHHHHHHHHHHHHHHCcCHHHHHHHhcCccHHHHHHHHHHHhcC
Confidence 67899999999997 78999999999999999999999999999999999999999999999999999999999876
No 12
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Probab=100.00 E-value=7.4e-40 Score=261.01 Aligned_cols=148 Identities=29% Similarity=0.388 Sum_probs=142.1
Q ss_pred CCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhhcCC-------
Q 031538 11 PSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLT------- 83 (158)
Q Consensus 11 ~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~~~~------- 83 (158)
++++.||+.|++|++|+||||.+|++||++||++|+++|.++|+..||++|+++|++++||+|++++++|+..
T Consensus 90 ~p~~~DA~~L~~A~kG~Gtde~~lieIL~~Rs~~q~~~I~~aY~~~y~~~Le~di~se~sG~~~~ll~~l~~~~R~e~~~ 169 (323)
T 1axn_A 90 PPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLADGRRDESLK 169 (323)
T ss_dssp CHHHHHHHHHHHHHCSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHTTCSCCCSC
T ss_pred CchHHHHHHHHHHhccCCCCHHHHhHHhcCCCHHHHHHHHHHHHHhhCcCHHHHHHHhcCcHHHHHHHHHHhcccccCCC
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred ----ChhHHHHHHHhhh-ccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhcC
Q 031538 84 ----PAERDAYLANEAT-KRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLVN 158 (158)
Q Consensus 84 ----~~~~~a~~l~~a~-~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~~ 158 (158)
++.+||..|++|+ +|+|||+..+++|||+||+.||.+|+++|++.||++|+++|++++||+|+++|+++++|.+|
T Consensus 170 vd~~~a~~DA~~L~~A~~~~~Gtde~~li~Il~tRs~~~L~~i~~~Y~~~~g~~Le~~I~~e~sG~~~~~Ll~lv~~~r~ 249 (323)
T 1axn_A 170 VDEHLAKQDAQILYKAGENRWGTDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFEDLLLAIVNCVRN 249 (323)
T ss_dssp CCHHHHHHHHHHHHHHTTTSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHHCcCHHHHHhHhcCchHHHHHHHHHHhcCC
Confidence 4899999999999 67999999999999999999999999999999999999999999999999999999998764
No 13
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Probab=100.00 E-value=3.1e-40 Score=264.20 Aligned_cols=154 Identities=20% Similarity=0.189 Sum_probs=141.3
Q ss_pred CccccCCCCCCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhh
Q 031538 1 MATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLW 80 (158)
Q Consensus 1 ~~~~~~~~~~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~ 80 (158)
|++-. +...++++.||+.|++|++|+ +||.+||+||++||++|+++|+.+|++.||++|.++|++++||+|++++++|
T Consensus 1 ~~~~~-~~~~~~v~~da~~L~kA~kg~-~de~~ii~IL~~rs~~Qr~~i~~~Y~~~~g~dL~~~lk~e~sG~fe~~l~~l 78 (337)
T 3chj_A 1 MANKN-YQMSTGVTAVVQKVVEACQDE-SKRLDLIEIARSYPPNQLRNMQRTFQAITGTFLDAFLKKHLSKDFESLVLML 78 (337)
T ss_dssp -----------CHHHHHHHHHHHHHCG-GGTTHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHTTSCHHHHHHHHHH
T ss_pred CCCCC-cccCchHHHHHHHHHHHhCCC-CCHHHHHHHHHcCCHHHHHHHHHHHHHHHCcCHHHHHHHhcCccHHHHHHHH
Confidence 34433 445568999999999999998 7999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHH--HHHHHHHhhhh
Q 031538 81 TLTPAERDAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDF--RKVHPSASKSL 156 (158)
Q Consensus 81 ~~~~~~~~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~--~~~ll~l~~~~ 156 (158)
+.+|+.+||+.|++||+|.|||+.+||+|+|+|++.|+..|+++|+++||++|+++|++++||+| +++|++|+.+.
T Consensus 79 ~~~p~~~dA~~L~~AmkG~GTde~~LieIl~tRs~~~l~~Ik~~Y~~~y~~sL~~di~~~tsG~~~w~~lLl~ll~~~ 156 (337)
T 3chj_A 79 YKPRAQLLCELIRGATKGAGTDEKCLVDVLLTIETHEVREIRQLYYQLYNDSLGDVVRKDCGDKYMWAKLINAVATGD 156 (337)
T ss_dssp TSCHHHHHHHHHHHHHSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHHHHHCSSSHHHHHHHHHHHCC
T ss_pred hCChHHHHHHHHHHhccCCCCChHHhhhhhhcCCHHHHHHHHHHHHHHHhHHHHHHHHhhcCCCchHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999988764
No 14
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding protein, membrane-binding protein, binding protein; 1.90A {Giardia intestinalis} PDB: 4evh_A
Probab=100.00 E-value=1.6e-39 Score=256.33 Aligned_cols=145 Identities=19% Similarity=0.215 Sum_probs=141.2
Q ss_pred CCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcC-cchHHHHHHhhcCCChhHHH
Q 031538 11 PSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKEL-SSDFERSVLLWTLTPAERDA 89 (158)
Q Consensus 11 ~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~-sG~~~~~l~~~~~~~~~~~a 89 (158)
|+|.+||+.|++|++| |||.+||+||++||++|+++|+.+|+..||++|+++|++++ ||+|++++++|+.+|+++||
T Consensus 2 ~~~~~da~~L~~A~kG--tde~~li~IL~~rs~~qr~~I~~~Y~~~yg~~L~~~lk~el~sG~f~~~l~~l~~~~~~~dA 79 (295)
T 4evf_A 2 PKVTDIANELKQAIDA--KDEVQIAFIASEYSAESREKIAKAYVASYGKELPDDIKKALKGGSEESLLMDLFSDRHEVRA 79 (295)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHTSCHHHHHHHHHHHHHHHSSCHHHHHHHHSCCSHHHHHHHHHTSCHHHHHH
T ss_pred CCHHHHHHHHHHHHcC--CCHHHHHHHHhCCCHHHHHHHHHHHHHHHCcCHHHHHHhhccCCCHHHHHHHHccCchHHHH
Confidence 5899999999999996 99999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcC--cHHHHHHHHHHhhhhcC
Q 031538 90 YLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHT--SGDFRKVHPSASKSLVN 158 (158)
Q Consensus 90 ~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~--sG~~~~~ll~l~~~~~~ 158 (158)
..|++|++|. ||+++|++|||+||+.|+.+|+++|++.||++|+++|++++ ||+|+++|++++++.++
T Consensus 80 ~~L~~A~kg~-tde~~lieIL~~Rs~~~l~~I~~~Y~~~y~~~Le~di~~e~~~sG~~~~~L~~ll~~~r~ 149 (295)
T 4evf_A 80 QHIRDALSGR-NDHMAFFDTVILCTPEDWHETVAAYTRMFKKPLVEDFMKDVGRKEDWCLLMEKWMAHERV 149 (295)
T ss_dssp HHHHHHHHSS-CCHHHHHHHHTSCCHHHHHHHHHHHHHHHSSCHHHHHHHHHCSSSHHHHHHHHHHHTCCC
T ss_pred HHHHHHhhCC-CCHHHHHHHHHcCCHHHHHHHHHHHHHhccccHHHHHHhhcccCCcHHHHHHHHHhcccc
Confidence 9999999998 99999999999999999999999999999999999999999 99999999999998653
No 15
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=100.00 E-value=7.3e-40 Score=261.28 Aligned_cols=144 Identities=25% Similarity=0.226 Sum_probs=138.5
Q ss_pred CHHHHHHHHHHhhhc-CCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhh---cCCChhH
Q 031538 12 SAAEDAEQLHKAFQG-WGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLW---TLTPAER 87 (158)
Q Consensus 12 ~~~~da~~L~~A~~g-~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~---~~~~~~~ 87 (158)
.++.||+.|++|+++ +|||+..|++||++||+.|++.|+.+|++.||++|.++|++++||+|+++|+++ +.+|+.+
T Consensus 178 ~a~~DA~~L~~A~~~~~GTde~~lirIl~tRs~~~L~~i~~~Y~~~~g~~L~~~I~~e~sGd~~~~Llalv~~~~~~~~~ 257 (327)
T 1w3w_A 178 LALQDAQDLYAAGEKIRGTDEMKFITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTQNLHSY 257 (327)
T ss_dssp HHHHHHHHHHHHHHCSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhhCcCCCcHhHhhHHHhcCCHHHHHHHHHHHHHHHCCCHHHHHhhhcCCcHHHHHHHHHHHcCCHHHH
Confidence 478899999999985 899999999999999999999999999999999999999999999999988754 5799999
Q ss_pred HHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhh
Q 031538 88 DAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKS 155 (158)
Q Consensus 88 ~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~ 155 (158)
+|+.|++||+|.|||+++||||+++|++.||..|+++|+++||++|+++|+++|||||+++|++|+++
T Consensus 258 fA~~L~~amkg~GTdd~~LiriivsR~e~dl~~Ik~~y~~~yg~sL~~~I~~~tsGdy~~~LlaL~~~ 325 (327)
T 1w3w_A 258 FAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMYGKTLSSMIMEDTSGDYKNALLSLVGS 325 (327)
T ss_dssp HHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHCC
T ss_pred HHHHHHhhccCCCCChhHeeeeeeECCHHHHHHHHHHHHHHhCCcHHHHHhhhCChHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999975
No 16
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent hexamerization switch E76, low calcium form; 1.93A {Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Probab=100.00 E-value=5.5e-40 Score=261.01 Aligned_cols=144 Identities=31% Similarity=0.344 Sum_probs=138.5
Q ss_pred CHHHHHHHHHHhhhc-CCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhh---cCCChhH
Q 031538 12 SAAEDAEQLHKAFQG-WGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLW---TLTPAER 87 (158)
Q Consensus 12 ~~~~da~~L~~A~~g-~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~---~~~~~~~ 87 (158)
.++.||+.|++|++| +|||+..|++||++||+.|++.|+.+|++.||++|.++|++++||+|+++|+++ +.+|+.+
T Consensus 168 ~a~~dA~~L~~A~~~~~GTde~~lirIl~~Rs~~~L~~i~~~Y~~~~g~~L~~~I~~e~sGd~~~~Llalv~~~~~~~~~ 247 (315)
T 1dm5_A 168 HAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAY 247 (315)
T ss_dssp HHHHHHHHHHHHTTTSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHSSSCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHHHhhhcCchHHHHHHHHHHHhcCchHH
Confidence 467899999999998 799999999999999999999999999999999999999999999999988764 4799999
Q ss_pred HHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhh
Q 031538 88 DAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKS 155 (158)
Q Consensus 88 ~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~ 155 (158)
+|+.|++||+|.|||+++|++|+++|++.||..|+++|+++||++|+++|+++|||||+++|++|+++
T Consensus 248 ~A~~L~~am~g~Gtd~~~Liriiv~rse~dl~~Ik~~y~~~yg~~L~~~I~~etsGdy~~~Llal~~~ 315 (315)
T 1dm5_A 248 FAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 315 (315)
T ss_dssp HHHHHHHHHCTTCCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhcCCCCHHHHhHHHHhcCHHHHHHHHHHHHHHhCCcHHHHHhhhCcHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999874
No 17
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=100.00 E-value=1.8e-39 Score=258.49 Aligned_cols=148 Identities=27% Similarity=0.375 Sum_probs=142.1
Q ss_pred CCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhhcC--------
Q 031538 11 PSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTL-------- 82 (158)
Q Consensus 11 ~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~~~-------- 82 (158)
++++.||+.|++|++|+||||.+|++||++||++|+++|+++|++.||++|+++|++++||+|++++++++.
T Consensus 86 ~~~~~DA~~L~~A~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~di~~e~sG~~~~~l~~l~~~~r~~~~~ 165 (320)
T 1yii_A 86 PARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEANLEDKITGETSGHFQRLLVVLLQANRDPDGR 165 (320)
T ss_dssp CHHHHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHTTCCCCSCC
T ss_pred ChHHHHHHHHHHHhccCCCchHHHhHHHhcCCHHHHHHHHHHHHHhhCcCHHHHHHhhcCCcHHHHHHHHHhhccCcccc
Confidence 467999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred ---CChhHHHHHHHhhhc-cCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhcC
Q 031538 83 ---TPAERDAYLANEATK-RFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLVN 158 (158)
Q Consensus 83 ---~~~~~~a~~l~~a~~-g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~~ 158 (158)
+++..||..|++|++ |+|||++.+++|+++|++.||.+|+++|++.||++|+++|++++||+|+++|+++++|..|
T Consensus 166 vd~~~a~~dA~~L~~A~~~~~Gtde~~li~Il~tRs~~~L~~i~~~Y~~~~g~~L~~~I~~e~sGd~~~~Llalv~~~~~ 245 (320)
T 1yii_A 166 VDEALVEKDAQVLFRAGELKWGTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLEKLLLAVVKCIRS 245 (320)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCSSHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHCCTTCCHHHHHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhCCHHHHHHHHHHHHHHHCcCHHHHHhhhcCchHHHHHHHHHHhccC
Confidence 567899999999998 4899999999999999999999999999999999999999999999999999999999876
No 18
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein, helix BUN heparin, hexasaccharide, metal binding protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB: 2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Probab=100.00 E-value=5.2e-39 Score=254.63 Aligned_cols=148 Identities=23% Similarity=0.302 Sum_probs=141.8
Q ss_pred CCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhhcCC-------
Q 031538 11 PSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLT------- 83 (158)
Q Consensus 11 ~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~~~~------- 83 (158)
++++.||+.|++|++|+||||.+|++||++||+.|+++|.++|+..||++|+++|++++||+|++++++|+..
T Consensus 74 ~~~~~DA~~L~~AmkG~Gtde~~LieIL~~Rs~~q~~~Ik~aY~~~y~~~L~~di~se~sG~f~~ll~~l~~~~r~~e~~ 153 (308)
T 2hyv_A 74 TPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGRRAEDGS 153 (308)
T ss_dssp CHHHHHHHHHHHHTSTTCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHSSCHHHHHHHTCCHHHHHHHHHHHTCCCCCCCS
T ss_pred CcHHHHHHHHHHHhhcCCCCHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCHHHHHhhccCccHHHHHHHHHccccccccC
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999853
Q ss_pred -----ChhHHHHHHHhhh-ccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhc
Q 031538 84 -----PAERDAYLANEAT-KRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLV 157 (158)
Q Consensus 84 -----~~~~~a~~l~~a~-~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~ 157 (158)
++.+||..|++|+ +++|||++++++||++||+.||.+|+++|++.||++|+++|++++||+++++|+++++|.+
T Consensus 154 ~vd~~~a~~DA~~L~~A~~~~~Gtde~~li~Il~~RS~~~L~~i~~~Y~~~~g~~Le~~I~~e~sG~~~~~L~~lv~~~~ 233 (308)
T 2hyv_A 154 VIDYELIDQDARDLYDAGVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNLVQCIQ 233 (308)
T ss_dssp SCCHHHHHHHHHHHHHTTTTSSSCCHHHHHHHHHHSCHHHHHHHHHHHTTTCSSCHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHCcCHHHHHHHhcCchHHHHHHHHHhccC
Confidence 3599999999996 6689999999999999999999999999999999999999999999999999999999987
Q ss_pred C
Q 031538 158 N 158 (158)
Q Consensus 158 ~ 158 (158)
|
T Consensus 234 ~ 234 (308)
T 2hyv_A 234 N 234 (308)
T ss_dssp C
T ss_pred C
Confidence 6
No 19
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form, FULL-length protein comprising protein core and N-terminal domain, metal; 1.80A {Sus scrofa} SCOP: a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Probab=100.00 E-value=1.8e-39 Score=260.55 Aligned_cols=149 Identities=26% Similarity=0.337 Sum_probs=143.2
Q ss_pred CCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhhcC-------
Q 031538 10 TPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTL------- 82 (158)
Q Consensus 10 ~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~~~------- 82 (158)
.++++.||+.|++|++|+||||.+|++||++||++|+++|+++|+..||++|+++|++++||+|++++++|+.
T Consensus 113 ~~p~~~DA~~L~~AmkG~GTde~~LieIL~~Rsn~q~~~Ik~aY~~~y~~~Le~di~se~sG~f~~ll~~L~~~~R~e~~ 192 (346)
T 1hm6_A 113 KTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINRVYKEELKRDLAKDITSDTSGDYQKALLSLAKGDRSEDL 192 (346)
T ss_dssp SCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHTSCCCHHHHHHHHCCHHHHHHHHHHHTTCCCCCC
T ss_pred CCcHHHHHHHHHHHhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhchhHHHHHhhccCCcHHHHHHHHhhccccccC
Confidence 3588999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ----CChhHHHHHHHhhh-ccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhc
Q 031538 83 ----TPAERDAYLANEAT-KRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLV 157 (158)
Q Consensus 83 ----~~~~~~a~~l~~a~-~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~ 157 (158)
+++++||..|++|+ +++|||++.+++||++||+.||.+|+++|++.||++|+++|++++||+++++|+++++|.+
T Consensus 193 ~vd~~~a~~DA~~L~~A~~~~~Gtde~~li~IL~tRS~~~L~~i~~~Y~~~~g~~Le~~I~~e~sG~~~~~L~~lv~~~r 272 (346)
T 1hm6_A 193 AINDDLADTDARALYEAGERRKGTDLNVFITILTTRSYPHLRRVFQKYSKYSKHDMNKVLDLELKGDIENCLTVVVKCAT 272 (346)
T ss_dssp SCCHHHHHHHHHHHHHHTTTSSSCCHHHHHHHHHHSCHHHHHHHHHHHHTTCCCCTTSBCCCCCBHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhccCCCcHHHHHHHHhcCCHHHHHHHHHHHHHHHCcCHHHHHHHHcCchHHHHHHHHHhhcC
Confidence 45899999999998 6689999999999999999999999999999999999999999999999999999999987
Q ss_pred C
Q 031538 158 N 158 (158)
Q Consensus 158 ~ 158 (158)
|
T Consensus 273 ~ 273 (346)
T 1hm6_A 273 S 273 (346)
T ss_dssp C
T ss_pred C
Confidence 6
No 20
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=100.00 E-value=9.5e-40 Score=260.23 Aligned_cols=145 Identities=24% Similarity=0.315 Sum_probs=140.0
Q ss_pred HHHHHHHHHHhhhc-CCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhh---cCCChhHH
Q 031538 13 AAEDAEQLHKAFQG-WGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLW---TLTPAERD 88 (158)
Q Consensus 13 ~~~da~~L~~A~~g-~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~---~~~~~~~~ 88 (158)
+..||+.|++|++| +|+|+. +++||++||+.|+++|+.+|++.||++|.++|++++||+|+++|+++ +.+|+.++
T Consensus 173 ~~~dA~~L~~A~~g~~gtde~-lirIl~~Rs~~~L~~I~~~Y~~~yg~~L~~~I~~e~sGd~~~~Ll~iv~~~~~~~~~~ 251 (321)
T 1n00_A 173 AKTEAKLLHEKISNKAYSDDD-VIRVLATRSKAQINATLNHYKNEYGNDINKDLKADPKDEFLALLRSTVKCLVYPEKYF 251 (321)
T ss_dssp HHHHHHHHHHHHHTTCTTCHH-HHHHHHHSCHHHHHHHHHHHHHHHSSCTTGGGCSSTTCHHHHHHHHHHHHHHCHHHHH
T ss_pred hHHHHHHHHHHhhCcCCCcHH-HHHHHHhCCHHHHHHHHHHHHHHhCccHHHHHhhhcCchHHHHHHHHHHHhcCchHHH
Confidence 78899999999999 788988 99999999999999999999999999999999999999999988765 46999999
Q ss_pred HHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhcC
Q 031538 89 AYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLVN 158 (158)
Q Consensus 89 a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~~ 158 (158)
|+.|++||+|.|||+.+|++|+++|++.||..|+++|+++||++|+++|+++|||||+++|++|+++..|
T Consensus 252 A~~L~~am~g~Gtd~~~Liriiv~rse~dl~~Ik~~y~~~yg~sL~~~I~~etsGdy~~~Llal~~~~~~ 321 (321)
T 1n00_A 252 EKVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADEYQRRNSVPLTRAIVKDTHGDYEKLLLVLAGHVEN 321 (321)
T ss_dssp HHHHHHHHTTCCSCTTHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHTTTTCCHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHhccCCCCHHHHHHHHHHcCHHHHHHHHHHHHHHhCCChHHHHhhhCCHHHHHHHHHHhCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999877
No 21
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A {Giardia intestinalis} PDB: 2iic_A
Probab=100.00 E-value=1.5e-38 Score=252.22 Aligned_cols=143 Identities=15% Similarity=0.162 Sum_probs=138.4
Q ss_pred CHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcC-cchHHHHHHhhcCCChhHHHH
Q 031538 12 SAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKEL-SSDFERSVLLWTLTPAERDAY 90 (158)
Q Consensus 12 ~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~-sG~~~~~l~~~~~~~~~~~a~ 90 (158)
+++.||+.|++|++|+ ||..||+||++||++|++.|..+|+..||++|.++|++++ ||+|++++++|+.+|+++||.
T Consensus 5 ~~~~~a~~L~kA~kG~--de~~lI~IL~~rs~~qr~~I~~~Y~~~yg~dL~~~lksel~sG~fe~~l~~l~~~p~~~DA~ 82 (310)
T 2ii2_A 5 SYGDAIPEVKAILEAK--NEEELVTFTSRWSAEERKELRTQFQDTTGLEFIAFLKKCIKNGPYEDVMALGWDCNISARVN 82 (310)
T ss_dssp -CTTHHHHHHHHHHTT--CHHHHHHHHTTCCHHHHHHHHHHHHHHHSSCHHHHHHHHSCSSHHHHHHHHHHSCHHHHHHH
T ss_pred CHHHHHHHHHHHHcCC--CHHHHHHHHhCCCHHHHHHHHHHHHHHHCccHHHHHHHhcCCCCHHHHHHHHhCCHHHHHHH
Confidence 5678899999999984 9999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcH--HHHHHHHHHhhhhc
Q 031538 91 LANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSG--DFRKVHPSASKSLV 157 (158)
Q Consensus 91 ~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG--~~~~~ll~l~~~~~ 157 (158)
.|++||+|. ||+.+||+|||+||+.|+..|+++|++.||++|+++|.+++|| +|+++|++|+++.+
T Consensus 83 ~L~~A~kg~-tde~~lieIL~~Rs~~~l~~I~~aY~~~y~~~Le~di~~e~sg~~~~~~ll~~ll~~~R 150 (310)
T 2ii2_A 83 VIKKAMKNV-NDFRAIHDVVLIATPDERLKLAQAYKEKTGNDLLQDFVDQIPLTSAASYLCHLAIRENR 150 (310)
T ss_dssp HHHHHHHSS-CCHHHHHHHHHSCCHHHHHHHHHHHHHHHSSCHHHHHHHHCCSCSHHHHHHHHHHHCCC
T ss_pred HHHHHhhCC-CcHHHHHHHHHcCCHHHHHHHHHHHHHHHCcCHHHHHHhhcCCchHHHHHHHHHHhccC
Confidence 999999998 9999999999999999999999999999999999999999999 99999999999765
No 22
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A {Giardia intestinalis} PDB: 2iic_A
Probab=100.00 E-value=4.3e-37 Score=243.90 Aligned_cols=147 Identities=13% Similarity=0.090 Sum_probs=141.9
Q ss_pred CCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcc--hHHHHHHhhcC------
Q 031538 11 PSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSS--DFERSVLLWTL------ 82 (158)
Q Consensus 11 ~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG--~~~~~l~~~~~------ 82 (158)
++++.||+.|++|++|+ |||.++++||++||++|+++|+++|+..||++|+++|++++|| +|++++++|+.
T Consensus 75 ~p~~~DA~~L~~A~kg~-tde~~lieIL~~Rs~~~l~~I~~aY~~~y~~~Le~di~~e~sg~~~~~~ll~~ll~~~R~e~ 153 (310)
T 2ii2_A 75 CNISARVNVIKKAMKNV-NDFRAIHDVVLIATPDERLKLAQAYKEKTGNDLLQDFVDQIPLTSAASYLCHLAIRENRTPR 153 (310)
T ss_dssp CHHHHHHHHHHHHHHSS-CCHHHHHHHHHSCCHHHHHHHHHHHHHHHSSCHHHHHHHHCCSCSHHHHHHHHHHHCCCCCC
T ss_pred CHHHHHHHHHHHHhhCC-CcHHHHHHHHHcCCHHHHHHHHHHHHHHHCcCHHHHHHhhcCCchHHHHHHHHHHhccCCcc
Confidence 47899999999999998 9999999999999999999999999999999999999999999 99999998885
Q ss_pred CChhHHHHHHHhhhcc-CCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcC-cHHHHHHHHHHhhhhcC
Q 031538 83 TPAERDAYLANEATKR-FTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHT-SGDFRKVHPSASKSLVN 158 (158)
Q Consensus 83 ~~~~~~a~~l~~a~~g-~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~-sG~~~~~ll~l~~~~~~ 158 (158)
+++..||..|++|++| +|||++.+++||++||+.||.+|+++|++.||++|+++|++++ ||+|+++|+++++|..|
T Consensus 154 ~~a~~DA~~L~~A~~~~~Gtde~~~i~Il~~Rs~~~L~~i~~~Y~~~~g~~l~~~I~~e~~sG~~~~~Ll~iv~~~~~ 231 (310)
T 2ii2_A 154 GSVASDAEVLKHNLIDADEPDHEAVVRLIITSTADEYKEINHRFEVLTGKSVQEAIETRYADKENARGLCIAHYYNLA 231 (310)
T ss_dssp SCHHHHHHHHHHHHTTSSSCCHHHHHHHHHHCCHHHHHHHHHHHHHHHSSCHHHHHHHHCCSHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHhhcccCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCccHHHHHHHHHHHhCC
Confidence 6689999999999988 8999999999999999999999999999999999999999999 99999999999999876
No 23
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding protein, membrane-binding protein, binding protein; 1.90A {Giardia intestinalis} PDB: 4evh_A
Probab=100.00 E-value=4.7e-37 Score=242.23 Aligned_cols=146 Identities=15% Similarity=0.179 Sum_probs=140.1
Q ss_pred CCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcC--cchHHHHHHhhcC-----
Q 031538 10 TPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKEL--SSDFERSVLLWTL----- 82 (158)
Q Consensus 10 ~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~--sG~~~~~l~~~~~----- 82 (158)
.++++.||+.|++|++|. |||..+++||++||++|+++|+++|++.||++|+++|++++ ||+|++++++|+.
T Consensus 72 ~~~~~~dA~~L~~A~kg~-tde~~lieIL~~Rs~~~l~~I~~~Y~~~y~~~Le~di~~e~~~sG~~~~~L~~ll~~~r~e 150 (295)
T 4evf_A 72 SDRHEVRAQHIRDALSGR-NDHMAFFDTVILCTPEDWHETVAAYTRMFKKPLVEDFMKDVGRKEDWCLLMEKWMAHERVS 150 (295)
T ss_dssp SCHHHHHHHHHHHHHHSS-CCHHHHHHHHTSCCHHHHHHHHHHHHHHHSSCHHHHHHHHHCSSSHHHHHHHHHHHTCCCC
T ss_pred cCchHHHHHHHHHHhhCC-CCHHHHHHHHHcCCHHHHHHHHHHHHHhccccHHHHHHhhcccCCcHHHHHHHHHhccccc
Confidence 346899999999999998 99999999999999999999999999999999999999999 9999999998874
Q ss_pred --CChhHHHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhhhcC
Q 031538 83 --TPAERDAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKSLVN 158 (158)
Q Consensus 83 --~~~~~~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~~~~ 158 (158)
+++.+||..|++|++| ||++.+++|+++|++.||.+|+++|++.||++|+++|++++||+|+++|+++++|..|
T Consensus 151 ~~~~~~~dA~~L~~A~~~--tde~~li~Il~tRs~~~L~~i~~~Y~~~~g~~L~~~I~~e~sGd~~~~Ll~iv~~~~~ 226 (295)
T 4evf_A 151 RPGSPEDEAQRLDQAFDQ--KNTAYLIDFFGTVPSAEYRPIAEAFKAQNGKSIEQAIATIYTKTDYYTFYCAHFALLG 226 (295)
T ss_dssp CSSCHHHHHHHHHHHHHT--TCHHHHHHHHHHCCHHHHHHHHHHHHHHSSSCHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_pred CchHHHHHHHHHHHhccC--CCHHHHhHHHHcCCHHHHHHHHHHHHHHhCCCHHHHHHHHcChHHHHHHHHHHHHhCC
Confidence 5679999999999999 9999999999999999999999999999999999999999999999999999999876
No 24
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Probab=100.00 E-value=1.5e-35 Score=237.07 Aligned_cols=148 Identities=22% Similarity=0.251 Sum_probs=142.3
Q ss_pred CCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchH--HHHHHhhcCC-----
Q 031538 11 PSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDF--ERSVLLWTLT----- 83 (158)
Q Consensus 11 ~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~--~~~l~~~~~~----- 83 (158)
+++..||+.|++|++|.|||+.+|++||++||+.|+++|+++|+..||++|+++|++++||+| ++++++|+..
T Consensus 81 ~p~~~dA~~L~~AmkG~GTde~~LieIl~tRs~~~l~~Ik~~Y~~~y~~sL~~di~~~tsG~~~w~~lLl~ll~~~R~e~ 160 (337)
T 3chj_A 81 PRAQLLCELIRGATKGAGTDEKCLVDVLLTIETHEVREIRQLYYQLYNDSLGDVVRKDCGDKYMWAKLINAVATGDRIPR 160 (337)
T ss_dssp CHHHHHHHHHHHHHSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHHHHHCSSSHHHHHHHHHHHCCCCCC
T ss_pred ChHHHHHHHHHHhccCCCCChHHhhhhhhcCCHHHHHHHHHHHHHHHhHHHHHHHHhhcCCCchHHHHHHHHHhcccCcc
Confidence 478899999999999999999999999999999999999999999999999999999999999 9999997753
Q ss_pred ---ChhHHHHHHHhhhcc---CCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcC-CCHHHHHhhcCcHHHHHHHHHHhhhh
Q 031538 84 ---PAERDAYLANEATKR---FTLSNWVLMEIACTRSSRDLFAAKQAYHARYK-KSLEEDVAYHTSGDFRKVHPSASKSL 156 (158)
Q Consensus 84 ---~~~~~a~~l~~a~~g---~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~-~~L~~~I~~~~sG~~~~~ll~l~~~~ 156 (158)
++..||..|++|++| +|||+..+++||++||+.||..|+++|++.|| ++|+++|++++||+++++|+++++|.
T Consensus 161 d~~~a~~DA~~L~~A~~~~gt~gtde~~~i~IL~~RS~~~L~~i~~~Y~~~~g~~~le~~I~~e~sG~~~~~L~~~v~~~ 240 (337)
T 3chj_A 161 DTHELEEDLVLVRKAIETKGVKKDEVSTWIRIFATYTRADFRQLHKMYSAKYNGDSLRAGVEDEFQGLDEYAFKLAHDFL 240 (337)
T ss_dssp CHHHHHHHHHHHHHHHHSSSCCGGGHHHHHHHHHHCCHHHHHHHHHHHHHHTTTCCHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCCHHHHHHHhcCchHHHHHHHHHHhh
Confidence 789999999999988 69999999999999999999999999999998 99999999999999999999999998
Q ss_pred cC
Q 031538 157 VN 158 (158)
Q Consensus 157 ~~ 158 (158)
.|
T Consensus 241 ~~ 242 (337)
T 3chj_A 241 YD 242 (337)
T ss_dssp HC
T ss_pred cC
Confidence 76
No 25
>1r4t_A Exoenzyme S; EXOS, GAP, toxin, virulence factor, signal transduction; NMR {Pseudomonas aeruginosa}
Probab=70.24 E-value=4.2 Score=28.03 Aligned_cols=47 Identities=23% Similarity=0.377 Sum_probs=38.9
Q ss_pred hcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhch--hHHHHhhhcCcc
Q 031538 25 QGWGTNEALIISVLAHRNAAQRKLIREIYNETYGE--DLLKALDKELSS 71 (158)
Q Consensus 25 ~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~--~L~~~i~~~~sG 71 (158)
..|||-.....+.+.+-|+++++++...-+...++ .|...|+++..|
T Consensus 90 qQWGT~GG~~~~~v~~AS~e~L~ea~~~lh~vm~eva~l~~ave~evag 138 (153)
T 1r4t_A 90 QQWGTTGGAASQLVLDASPELRREITDQLHQVMSEVALLRQAVESEVSR 138 (153)
T ss_dssp GGTTSSSSHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhccccHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34899888999999999999999999988877764 566777777766
No 26
>1he1_A Exoenzyme S, EXOS; signaling protein, signalling complex, EXOS, RAC, pseudomonas aeruginosa, GAP, virulence factor; HET: GDP; 2.0A {Pseudomonas aeruginosa} SCOP: a.24.11.1 PDB: 1he9_A
Probab=53.94 E-value=9.7 Score=25.72 Aligned_cols=42 Identities=21% Similarity=0.378 Sum_probs=33.7
Q ss_pred CCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhch--hHHHHhhhc
Q 031538 27 WGTNEALIISVLAHRNAAQRKLIREIYNETYGE--DLLKALDKE 68 (158)
Q Consensus 27 ~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~--~L~~~i~~~ 68 (158)
|||-.....+.+.+-|+++++++...-+...++ .|...|+.|
T Consensus 90 WGT~GG~~~~~v~~As~e~L~ea~~~lh~vm~eva~l~~av~ae 133 (135)
T 1he1_A 90 WGTTGGAASQLVLDASPELRREITDQLHQVMSEVALLRQAVESE 133 (135)
T ss_dssp HTCSSSHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 788888889999999999999999988877765 344555554
No 27
>1mty_G Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.23.3.1 PDB: 1mmo_G 1xmg_E 1xmf_E 1xmh_E 1xvb_E 1fyz_E 1fz0_E 1fz2_E 1fz3_E 1fz4_E 1fz5_E 1fz6_E 1fz7_E 1fz8_E 1fz9_E 1fzh_E 1fzi_E 1xu3_E 1xu5_E 1fz1_E ...
Probab=46.95 E-value=61 Score=22.41 Aligned_cols=97 Identities=4% Similarity=0.026 Sum_probs=58.9
Q ss_pred HHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchH-HHHH---HhhcCCChhHHHHHHHhhhccCCCcHH-----H
Q 031538 35 ISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDF-ERSV---LLWTLTPAERDAYLANEATKRFTLSNW-----V 105 (158)
Q Consensus 35 ~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~-~~~l---~~~~~~~~~~~a~~l~~a~~g~gtd~~-----~ 105 (158)
..|-.-+|-++--+..+.|...|-..+-..-.-+....| +.-+ +++++.....+++.+.+++.| .|-. .
T Consensus 14 ~KIa~L~tl~~a~~~l~dFR~~~t~Pfr~sy~ld~d~~wIE~kIEervavLk~~~~~d~~ll~k~~~G--~da~~V~~~~ 91 (162)
T 1mty_G 14 NKIAHVNTLEKAAEMLKQFRMDHTTPFRNSYELDNDYLWIEAKLEEKVAVLKARAFNEVDFRHKTAFG--EDAKSVLDGT 91 (162)
T ss_dssp HHHHTCCSHHHHHHHHHHHHHHHSSTTCSCCTTTTTHHHHHHHHHHHHHHHHHHHSCHHHHHHBCTTS--CBHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHcCCCcccchhhhhhHHHHHHHHHHHHHHHHHhhccHHHHHHhcccC--cCHHHHHHHH
Confidence 345556777887788888877664422222111111222 1111 244444466688999999887 4533 3
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHhcCCCH
Q 031538 106 LMEIACTRSSRDLFAAKQAYHARYKKSL 133 (158)
Q Consensus 106 li~il~~rs~~~l~~I~~~Y~~~y~~~L 133 (158)
+-.+=..-+.-|.+.|.-+|++.|+-++
T Consensus 92 ~ak~~a~~d~yEaErI~i~FR~~~KPPv 119 (162)
T 1mty_G 92 VAKMNAAKDKWEAEKIHIGFRQAYKPPI 119 (162)
T ss_dssp HHHHHHCCSHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHccCHHHHHHHHHHHHHhcCCCC
Confidence 3334445677899999999999998665
No 28
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=45.43 E-value=47 Score=19.83 Aligned_cols=39 Identities=26% Similarity=0.141 Sum_probs=28.2
Q ss_pred CCCCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHH
Q 031538 8 TQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKL 48 (158)
Q Consensus 8 ~~~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~ 48 (158)
-.++.+++| +.|.++.+..|..=..|...| +||..|.+.
T Consensus 23 k~~wT~EED-~~L~~l~~~~G~kW~~IA~~l-gRt~~q~kn 61 (73)
T 2llk_A 23 VGKYTPEEI-EKLKELRIKHGNDWATIGAAL-GRSASSVKD 61 (73)
T ss_dssp CCSSCHHHH-HHHHHHHHHHSSCHHHHHHHH-TSCHHHHHH
T ss_pred CCCCCHHHH-HHHHHHHHHHCCCHHHHHHHh-CCCHHHHHH
Confidence 446788888 455667666666667888888 999887654
No 29
>1mhy_G Methane monooxygenase hydroxylase; oxidoreductase, NADP, one-carbon metabolism; 2.00A {Methylosinus trichosporium} SCOP: a.23.3.1 PDB: 1mhz_G
Probab=45.40 E-value=56 Score=22.73 Aligned_cols=97 Identities=18% Similarity=0.168 Sum_probs=58.5
Q ss_pred HHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchH-HHHH---HhhcCCChhHHHHHHHhhhccCCCcHH-----H
Q 031538 35 ISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDF-ERSV---LLWTLTPAERDAYLANEATKRFTLSNW-----V 105 (158)
Q Consensus 35 ~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~-~~~l---~~~~~~~~~~~a~~l~~a~~g~gtd~~-----~ 105 (158)
..|-.-+|-++--+..+.|...|-..+-..-.-+....| +.-+ +++++.....+++.+.+++.| .|-. .
T Consensus 18 ~KIa~L~tl~~a~a~l~dFR~~~t~Pfr~sy~ld~d~~wIE~kIEervavLk~~~~~d~~ll~k~~~G--~da~~V~~~~ 95 (169)
T 1mhy_G 18 AKIAKLTSVDQATKFIQDFRLAYTSPFRKSYDIDVDYQYIERKIEEKLSVLKTEKLPVADLITKATTG--EDAAAVEATW 95 (169)
T ss_dssp HHHHTCCSHHHHHHHHHHHHHHHSSTTCSCCTTTTTHHHHHHHHHHHHHHHHHHHSCHHHHHHBCTTS--CBHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHcCCCcccchhhhhhHHHHHHHHHHHHHHHHhhhccHHHHHHhcccC--cCHHHHHHHH
Confidence 345556777887788888877664422221111111222 1111 244444466688999999887 4533 3
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHhcCCCH
Q 031538 106 LMEIACTRSSRDLFAAKQAYHARYKKSL 133 (158)
Q Consensus 106 li~il~~rs~~~l~~I~~~Y~~~y~~~L 133 (158)
+-.+=..-+.-|.+.|.-+|++.|+-++
T Consensus 96 ~ak~~a~~d~yEaErI~i~FR~~~KPPv 123 (169)
T 1mhy_G 96 IAKIKAAKSKYEAEAIHIEFRQLYKPPV 123 (169)
T ss_dssp HHHHHTCCSHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHccCHHHHHHHHHHHHHhcCCCC
Confidence 3334445577899999999999998665
No 30
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=45.02 E-value=45 Score=19.50 Aligned_cols=45 Identities=18% Similarity=0.187 Sum_probs=33.9
Q ss_pred CCCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHH
Q 031538 9 QTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYN 54 (158)
Q Consensus 9 ~~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~ 54 (158)
..+..++| +.|.++....|.+=..|...|.+||..|.+.=...|.
T Consensus 10 ~~WT~eEd-~~l~~~~~~~G~~W~~Ia~~~~~Rt~~q~k~r~~~~l 54 (72)
T 2cu7_A 10 VKWTIEEK-ELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYF 54 (72)
T ss_dssp CCCCHHHH-HHHHHHHHHTCSCHHHHHHHHSSSCHHHHHHHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 35677777 5667788888888888999999999988766444443
No 31
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=44.33 E-value=28 Score=25.89 Aligned_cols=44 Identities=18% Similarity=0.255 Sum_probs=36.4
Q ss_pred HHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhc
Q 031538 15 EDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYG 58 (158)
Q Consensus 15 ~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g 58 (158)
++-..+.+|+...|.|-..|.+.+.+||..|.......|++.++
T Consensus 139 EE~~lFleAl~kYGKDW~~IAk~VgTKT~~QcKnfY~~~kKRln 182 (235)
T 2iw5_B 139 EEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFN 182 (235)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHSSCCHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHHHHhh
Confidence 44467778888878899999999999999999988877777666
No 32
>3t72_q RNA polymerase sigma factor RPOD, DNA-directed RN polymerase subunit beta; winged-helix motif, transcription activation, DNA-binding; 4.33A {Escherichia coli} PDB: 1tlh_B
Probab=43.25 E-value=60 Score=20.40 Aligned_cols=79 Identities=13% Similarity=0.043 Sum_probs=39.5
Q ss_pred HHHHHhhcCCHHHHHHHHHHHH-----HhhchhHHHHhhhcCcchHHHHHH-hhcCCChhHHHHHHHhhhccCCCcHHHH
Q 031538 33 LIISVLAHRNAAQRKLIREIYN-----ETYGEDLLKALDKELSSDFERSVL-LWTLTPAERDAYLANEATKRFTLSNWVL 106 (158)
Q Consensus 33 ~l~~il~~rs~~ql~~i~~~Y~-----~~~g~~L~~~i~~~~sG~~~~~l~-~~~~~~~~~~a~~l~~a~~g~gtd~~~l 106 (158)
.+.+.+...++.|+.-+.-.|- ...-.++.+.+.-. .+..+..+. ++-+=........|+.-+.+.|+++.-|
T Consensus 12 ~l~~aL~~Lp~reR~Vi~Lry~l~~~e~~s~~EIA~~lgiS-~~tVr~~~~rAlkkLR~~~~~~~l~~~~~~~~~~~~~~ 90 (99)
T 3t72_q 12 ATHDVLAGLTAREAKVLRMRFGIDMNTDYTLEEVGKQFDVT-RERIRQIEAKALRKLRHPSRSEVLRSGSSGSGTPEEKL 90 (99)
T ss_pred HHHHHHHcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHCcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 3455566667777666666552 22223333333111 112222221 1111122333566777788889999888
Q ss_pred HHHHHh
Q 031538 107 MEIACT 112 (158)
Q Consensus 107 i~il~~ 112 (158)
.+.+.+
T Consensus 91 ~~~~~~ 96 (99)
T 3t72_q 91 LRAIFG 96 (99)
T ss_pred HHHHhc
Confidence 876654
No 33
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=41.79 E-value=46 Score=18.69 Aligned_cols=39 Identities=15% Similarity=0.130 Sum_probs=29.5
Q ss_pred CCCCHHHHHHHHHHhhhcCC-CcHHHHHHHhhcCCHHHHHH
Q 031538 9 QTPSAAEDAEQLHKAFQGWG-TNEALIISVLAHRNAAQRKL 48 (158)
Q Consensus 9 ~~~~~~~da~~L~~A~~g~g-tde~~l~~il~~rs~~ql~~ 48 (158)
..+.+++| +.|.++++..| .+=..|...+.+||+.|.+.
T Consensus 9 ~~WT~eED-~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~ 48 (60)
T 1x41_A 9 PSWTAQEE-MALLEAVMDCGFGNWQDVANQMCTKTKEECEK 48 (60)
T ss_dssp SSSCHHHH-HHHHHHHHHTCTTCHHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHHHCcCcHHHHHHHhCCCCHHHHHH
Confidence 45778888 55678888777 36678888899999987654
No 34
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=39.48 E-value=62 Score=19.51 Aligned_cols=45 Identities=9% Similarity=-0.011 Sum_probs=33.5
Q ss_pred CCCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhh
Q 031538 9 QTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETY 57 (158)
Q Consensus 9 ~~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~ 57 (158)
....+++| +.|.+|+...|.+=..|.+.+.+||+.|.+ ..|.+.|
T Consensus 19 ~~WT~eEd-~~Ll~~v~~~G~~W~~IA~~v~~RT~~qcr---~r~~~~~ 63 (79)
T 2yus_A 19 REWTEQET-LLLLEALEMYKDDWNKVSEHVGSRTQDECI---LHFLRLP 63 (79)
T ss_dssp CCCCHHHH-HHHHHHHHHSSSCHHHHHHHHSSCCHHHHH---HHHTTSC
T ss_pred CCcCHHHH-HHHHHHHHHhCCCHHHHHHHcCCCCHHHHH---HHHHHhc
Confidence 34666777 677889988776778888999999988865 4666553
No 35
>1j2j_B ADP-ribosylation factor binding protein GGA1, ADP-ribosylation factor 1; protein transport; HET: GTP; 1.60A {Homo sapiens} SCOP: a.7.8.1
Probab=39.41 E-value=47 Score=18.07 Aligned_cols=28 Identities=14% Similarity=0.288 Sum_probs=23.2
Q ss_pred HHHHHhhcCCHHHHHHHHHHHHHhhchh
Q 031538 33 LIISVLAHRNAAQRKLIREIYNETYGED 60 (158)
Q Consensus 33 ~l~~il~~rs~~ql~~i~~~Y~~~~g~~ 60 (158)
.+..+|-+.+|+++++-....+.+++.+
T Consensus 12 ~L~~Ll~s~~P~Dlq~AN~LiK~mv~ed 39 (45)
T 1j2j_B 12 MLARLLKSSHPEDLRAANKLIKEMVQED 39 (45)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCChhhHHHHHHHHHHHhhHH
Confidence 4668888999999999998888887654
No 36
>3frr_A Uncharacterized protein KIAA0174; ESCRT, ESCRT-III, CHMP, IST1, alternative splicing, phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3frs_A
Probab=39.11 E-value=64 Score=23.12 Aligned_cols=41 Identities=12% Similarity=0.165 Sum_probs=30.6
Q ss_pred CCHHHHHHHHHHHHHhhchhHHHHhhhcCcchH-HHHHHhhc
Q 031538 41 RNAAQRKLIREIYNETYGEDLLKALDKELSSDF-ERSVLLWT 81 (158)
Q Consensus 41 rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~-~~~l~~~~ 81 (158)
..-++++.|+..+..+||+++.........|.. .+++-.+.
T Consensus 114 ~elpEL~~ir~~l~~KyGkeF~~~a~e~~~~~Vn~~iv~kLs 155 (191)
T 3frr_A 114 SEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLS 155 (191)
T ss_dssp TTCHHHHHHHHHHHHHHCHHHHHHHHTTTTSCSCHHHHHHTC
T ss_pred ccChHHHHHHHHHHHHhCHHHHHHHHHcCCCCcCHHHHHHcC
Confidence 356799999999999999999998877655554 34444443
No 37
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=36.78 E-value=51 Score=17.73 Aligned_cols=38 Identities=29% Similarity=0.308 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHhhhcCCC-cHHHHHHHhhcCCHHHHHH
Q 031538 10 TPSAAEDAEQLHKAFQGWGT-NEALIISVLAHRNAAQRKL 48 (158)
Q Consensus 10 ~~~~~~da~~L~~A~~g~gt-de~~l~~il~~rs~~ql~~ 48 (158)
.+.+++| +.|.++....|. +=..|...+.+||+.|.+.
T Consensus 5 ~Wt~eED-~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~ 43 (52)
T 1guu_A 5 RWTREED-EKLKKLVEQNGTDDWKVIANYLPNRTDVQCQH 43 (52)
T ss_dssp CCCHHHH-HHHHHHHHHHCSSCHHHHHHTSTTCCHHHHHH
T ss_pred CCCHHHH-HHHHHHHHHhCCCCHHHHHHHcCCCCHHHHHH
Confidence 4667777 456777776565 6678888888999987654
No 38
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.05 E-value=66 Score=18.55 Aligned_cols=39 Identities=31% Similarity=0.295 Sum_probs=28.9
Q ss_pred CCCCHHHHHHHHHHhhhcCC-CcHHHHHHHhhcCCHHHHHH
Q 031538 9 QTPSAAEDAEQLHKAFQGWG-TNEALIISVLAHRNAAQRKL 48 (158)
Q Consensus 9 ~~~~~~~da~~L~~A~~g~g-tde~~l~~il~~rs~~ql~~ 48 (158)
..+.+++| +.|.++....| .+=..|...|.+|+..|.+.
T Consensus 10 ~~Wt~eED-~~L~~~v~~~G~~~W~~Ia~~l~~Rt~~qcr~ 49 (70)
T 2dim_A 10 GVWRNTED-EILKAAVMKYGKNQWSRIASLLHRKSAKQCKA 49 (70)
T ss_dssp CCCCHHHH-HHHHHHHHHTCSSCHHHHHHHSTTCCHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHHHCcCCHHHHHHHhcCCCHHHHHH
Confidence 35777887 56777887767 46678888888999887654
No 39
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=33.34 E-value=65 Score=17.91 Aligned_cols=40 Identities=23% Similarity=0.291 Sum_probs=29.9
Q ss_pred CCCCCHHHHHHHHHHhhhcCCC-cHHHHHHHhhcCCHHHHHH
Q 031538 8 TQTPSAAEDAEQLHKAFQGWGT-NEALIISVLAHRNAAQRKL 48 (158)
Q Consensus 8 ~~~~~~~~da~~L~~A~~g~gt-de~~l~~il~~rs~~ql~~ 48 (158)
-..+.+++| +.|.++....|. +=..|...|.+||..|.+.
T Consensus 8 k~~Wt~eED-~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~ 48 (60)
T 2d9a_A 8 KVKWTHEED-EQLRALVRQFGQQDWKFLASHFPNRTDQQCQY 48 (60)
T ss_dssp CSCCCHHHH-HHHHHHHHHTCTTCHHHHHHHCSSSCHHHHHH
T ss_pred CCCCCHHHH-HHHHHHHHHhCCCCHHHHHHHccCCCHHHHHH
Confidence 345778888 567778877774 6678888888999987654
No 40
>3fke_A Polymerase cofactor VP35; RNA binding domain, coiled coil, interferon antiviral system evasion, RNA replication, RNA-binding; 1.40A {Zaire ebolavirus - mayinga} PDB: 3l25_A 3l26_A 3l28_A 3l27_A 3l29_A 3l2a_A
Probab=31.02 E-value=42 Score=22.05 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=33.9
Q ss_pred hhHHHHHHHhhhccCCCcHHHHHHHHH--hCCHHHHHHHHHHHHHh
Q 031538 85 AERDAYLANEATKRFTLSNWVLMEIAC--TRSSRDLFAAKQAYHAR 128 (158)
Q Consensus 85 ~~~~a~~l~~a~~g~gtd~~~li~il~--~rs~~~l~~I~~~Y~~~ 128 (158)
+.-.++.|+.-+.|.||..--|..++| ++.+..|..+-..|++.
T Consensus 10 akdl~~il~~hLpG~~TaFH~Lvqvi~kvgkd~~~Ld~~h~~F~~~ 55 (129)
T 3fke_A 10 AKDLRNIMYDHLPGFGTAFHQLVQVICKLGKDSNSLDIIHAEFQAS 55 (129)
T ss_dssp HHHHHHHHHTTSSSSSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHccchhHHHHHHHHHHHH
Confidence 445677778888899999888888775 67777888888888763
No 41
>3ks4_A Polymerase cofactor VP35; RNA-binding protein, protein-RNA complex, interferon, HOST cytoplasm, interferon antiviral system evasion; 2.40A {Reston ebolavirus} PDB: 3ks8_A
Probab=30.96 E-value=51 Score=22.96 Aligned_cols=55 Identities=13% Similarity=0.117 Sum_probs=42.0
Q ss_pred hhHHHHHHHhhhccCCCcHHHHHHHHH--hCCHHHHHHHHHHHHHh--cCCCHHHHHhh
Q 031538 85 AERDAYLANEATKRFTLSNWVLMEIAC--TRSSRDLFAAKQAYHAR--YKKSLEEDVAY 139 (158)
Q Consensus 85 ~~~~a~~l~~a~~g~gtd~~~li~il~--~rs~~~l~~I~~~Y~~~--y~~~L~~~I~~ 139 (158)
+.-.+..|+.-+.|.||..--|..++| ++.+..|..|-+.|++. =|.+-.-+|.+
T Consensus 65 akdl~~il~~HLpG~~TaFHqLvqvI~kvgkD~~~Ldi~h~eFqa~LaeGdS~q~AlIq 123 (184)
T 3ks4_A 65 AKDLKEIMYDHLPGFGTAFHQLVQVICKIGKDNNLLDTIHAEFQASLADGDSPQCALIQ 123 (184)
T ss_dssp HHHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHccchhHHHHHHHHHHHHHhcCCCcchhHHH
Confidence 556788888999999999999999876 78888899899988864 25555444443
No 42
>1r8s_E ARNO; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Homo sapiens} SCOP: a.118.3.1 PDB: 1r8m_E* 1r8q_E* 1s9d_E* 1pbv_A 1bc9_A
Probab=30.39 E-value=1.5e+02 Score=21.27 Aligned_cols=53 Identities=23% Similarity=0.218 Sum_probs=41.9
Q ss_pred CCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhh---chhHHHHhhh
Q 031538 11 PSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETY---GEDLLKALDK 67 (158)
Q Consensus 11 ~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~---g~~L~~~i~~ 67 (158)
.+|+.-|+.|+.. .|-|...+-+.|+.+++.. ..|..+|-..+ |.+|.++|+.
T Consensus 42 ~~p~~iA~fL~~~---~~l~k~~igeyLg~~~~~n-~~vl~~y~~~fdF~~~~ld~ALR~ 97 (203)
T 1r8s_E 42 NTPEEIARFLYKG---EGLNKTAIGDYLGEREELN-LAVLHAFVDLHEFTDLNLVQALRQ 97 (203)
T ss_dssp SSHHHHHHHHHHC---TTCCHHHHHHHHTCCSHHH-HHHHHHHHHTCCCTTCCHHHHHHH
T ss_pred CCHHHHHHHHHHC---cCcCHHHHHHHHhccchHH-HHHHHHHHHhcCCCCCcHHHHHHH
Confidence 3677788888874 3579999999999987655 47888898875 6788888876
No 43
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=29.71 E-value=1.2e+02 Score=19.72 Aligned_cols=105 Identities=14% Similarity=0.200 Sum_probs=60.1
Q ss_pred CCCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhchhHHHHhhhcCcchHHHHHHhhcCCChhHHH
Q 031538 10 TPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDA 89 (158)
Q Consensus 10 ~~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~~~sG~~~~~l~~~~~~~~~~~a 89 (158)
.+.+++| +.|.++....|.+=..|...+.+|++.|.+ +.|.+....+ ++ .|.| ..+ +-
T Consensus 13 ~WT~eED-~~L~~~v~~~G~~W~~Ia~~~~~Rt~~qcr---~Rw~~~l~p~----~~---~~~W----------T~e-Ed 70 (126)
T 3osg_A 13 KFTPEED-EMLKRAVAQHGSDWKMIAATFPNRNARQCR---DRWKNYLAPS----IS---HTPW----------TAE-ED 70 (126)
T ss_dssp CCCHHHH-HHHHHHHHHHTTCHHHHHHTCTTCCHHHHH---HHHHHHTSTT----SC---CSCC----------CHH-HH
T ss_pred CCCHHHH-HHHHHHHHHhCCCHHHHHHHcCCCCHHHHH---HHHhhhcccc----cc---cccC----------CHH-HH
Confidence 4677787 567888887677778888888899987654 4555433221 11 1111 011 11
Q ss_pred HHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHH
Q 031538 90 YLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEED 136 (158)
Q Consensus 90 ~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~ 136 (158)
..|.++....|.+-..+-..+-+|++.+...--..+.++.|.+....
T Consensus 71 ~~L~~~v~~~G~~W~~Ia~~l~gRt~~~~k~rw~~l~~k~~~p~~~~ 117 (126)
T 3osg_A 71 ALLVQKIQEYGRQWAIIAKFFPGRTDIHIKNRWVTISNKLGIPQTQQ 117 (126)
T ss_dssp HHHHHHHHHHCSCHHHHHTTSTTCCHHHHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 22333333335666666666678998877666556666677665543
No 44
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=28.56 E-value=66 Score=18.33 Aligned_cols=38 Identities=16% Similarity=0.247 Sum_probs=27.4
Q ss_pred HHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhch
Q 031538 18 EQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGE 59 (158)
Q Consensus 18 ~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g~ 59 (158)
+.|.+|++....++.-+.+++.. .+++|++.|-+..|.
T Consensus 15 kaLdeaIe~GPWe~SNFLRvIGK----nL~eIRd~F~~~i~~ 52 (57)
T 3fxd_A 15 KALNDAIEKGPWDKSNFLRVIGK----KLIAIRDRFLKRIGA 52 (57)
T ss_dssp HHHHHHHHHSCTTSCHHHHHHHH----HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCchHHHHHHHHHH----hHHHHHHHHHHHhcc
Confidence 45556666545688889888865 688999888876553
No 45
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.36 E-value=92 Score=18.13 Aligned_cols=40 Identities=20% Similarity=0.137 Sum_probs=28.6
Q ss_pred CCCCHHHHHHHHHHhhhcCCC------cHHHHHHHhhcCCHHHHHHH
Q 031538 9 QTPSAAEDAEQLHKAFQGWGT------NEALIISVLAHRNAAQRKLI 49 (158)
Q Consensus 9 ~~~~~~~da~~L~~A~~g~gt------de~~l~~il~~rs~~ql~~i 49 (158)
..+..++| +.|.+++...|. +=..|...|.+||..|.+.=
T Consensus 9 ~~WT~eEd-~~L~~~v~~~g~~~~~~~~W~~IA~~~~~Rt~~qcr~r 54 (75)
T 2yum_A 9 QLWTVEEQ-KKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASQ 54 (75)
T ss_dssp SCCCHHHH-HHHHHHHHHSCCCSCHHHHHHHHHHHHSSSCHHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHHhCCCCCCcccHHHHHHHhCCCCHHHHHHH
Confidence 35677777 567788887663 34677788889998876543
No 46
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=28.10 E-value=1.9e+02 Score=22.19 Aligned_cols=54 Identities=24% Similarity=0.236 Sum_probs=42.2
Q ss_pred CCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhh---chhHHHHhhhc
Q 031538 11 PSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETY---GEDLLKALDKE 68 (158)
Q Consensus 11 ~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~---g~~L~~~i~~~ 68 (158)
.+++.-|+.|+.. .|.|...+-+.|..+++.. .+|..+|-..+ |.+|.++|+.-
T Consensus 44 ~~~~~ia~fl~~~---~~l~k~~ig~~l~~~~~~~-~~vl~~~~~~~~f~~~~~~~alR~~ 100 (347)
T 2r09_A 44 SSPEDVAQFLYKG---EGLNKTVIGDYLGERDDFN-IKVLQAFVELHEFADLNLVQALRQF 100 (347)
T ss_dssp CSHHHHHHHHHHC---TTCCHHHHHHHHHCCSHHH-HHHHHHHHHTSCCTTCCHHHHHHHH
T ss_pred CCHHHHHHHHHhC---cCcCHHHHHHHhcCCCchH-HHHHHHHHHhcCcCCCCHHHHHHHH
Confidence 3777788888874 3579999999999987554 47788888875 78899988774
No 47
>2z16_A Matrix protein 1, M1; AIV-7M1, H5N1, structural genomics; 2.02A {Influenza a virus} PDB: 3md2_A 1ea3_A 1aa7_A
Probab=27.22 E-value=39 Score=23.12 Aligned_cols=27 Identities=30% Similarity=0.400 Sum_probs=21.9
Q ss_pred HHHHHHHHhhhcCCCcHHHHHHHhhcC
Q 031538 15 EDAEQLHKAFQGWGTNEALIISVLAHR 41 (158)
Q Consensus 15 ~da~~L~~A~~g~gtde~~l~~il~~r 41 (158)
+-++.|+.-+.|+.+|-+.+++-|-+|
T Consensus 30 eia~~l~~~f~gkntDLealmEWlk~r 56 (165)
T 2z16_A 30 EIAQKLEDVFAGKNTDLEALMEWLKTR 56 (165)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHcccccCHHHHHHHHhcC
Confidence 447888999999889988888877665
No 48
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=27.04 E-value=63 Score=15.82 Aligned_cols=28 Identities=11% Similarity=0.204 Sum_probs=21.5
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHhhc
Q 031538 31 EALIISVLAHRNAAQRKLIREIYNETYG 58 (158)
Q Consensus 31 e~~l~~il~~rs~~ql~~i~~~Y~~~~g 58 (158)
.+.+++-+.+-|--++.++.++.+..||
T Consensus 3 ~~~iie~i~~lTvlEl~eLvk~lEe~fG 30 (30)
T 1zav_U 3 IDEIIEAIEKLTVSELAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHSBHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHhC
Confidence 3567777888888888888888877765
No 49
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=26.50 E-value=77 Score=16.62 Aligned_cols=30 Identities=10% Similarity=0.170 Sum_probs=25.3
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHhhchh
Q 031538 31 EALIISVLAHRNAAQRKLIREIYNETYGED 60 (158)
Q Consensus 31 e~~l~~il~~rs~~ql~~i~~~Y~~~~g~~ 60 (158)
.+.|++-+.+-|--++.++.+..+..||.+
T Consensus 3 ~~~iie~i~~lTvlE~~eLvk~leekfGVs 32 (40)
T 1dd4_C 3 IDEIIEAIEKLTVSELAELVKKLEDKFGVT 32 (40)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHCCC
Confidence 356788888999999999999999998864
No 50
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=25.56 E-value=93 Score=17.25 Aligned_cols=39 Identities=23% Similarity=0.152 Sum_probs=29.9
Q ss_pred CCCCHHHHHHHHHHhhhcCC-CcHHHHHHHhh-cCCHHHHHH
Q 031538 9 QTPSAAEDAEQLHKAFQGWG-TNEALIISVLA-HRNAAQRKL 48 (158)
Q Consensus 9 ~~~~~~~da~~L~~A~~g~g-tde~~l~~il~-~rs~~ql~~ 48 (158)
....+++|. .|.++++..| .+=..|...+. +||+.|.+.
T Consensus 10 ~~WT~eED~-~L~~~v~~~G~~~W~~IA~~~~~~Rt~~qcr~ 50 (58)
T 2elk_A 10 ENWGADEEL-LLIDACETLGLGNWADIADYVGNARTKEECRD 50 (58)
T ss_dssp CCCCHHHHH-HHHHHHHHTTTTCHHHHHHHHCSSCCHHHHHH
T ss_pred CCCCHHHHH-HHHHHHHHHCcCCHHHHHHHHCCCCCHHHHHH
Confidence 357788884 6788888777 46688888888 899988654
No 51
>4afi_A AP-3 complex subunit delta-1, vesicle-associated protein 7; endocytosis, exocytosis, clathrin adaptor, chimera, fusion P; 2.80A {Homo sapiens}
Probab=25.49 E-value=24 Score=24.87 Aligned_cols=39 Identities=18% Similarity=0.318 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhcCCCHHHHHhhcCcHHHHHHHHHHhhh
Q 031538 117 DLFAAKQAYHARYKKSLEEDVAYHTSGDFRKVHPSASKS 155 (158)
Q Consensus 117 ~l~~I~~~Y~~~y~~~L~~~I~~~~sG~~~~~ll~l~~~ 155 (158)
-|.+|++.|.+.||.....+..-.+..+|...|-.+.+-
T Consensus 131 FLedI~~eF~~~yg~~~~ta~pya~~~eF~~~L~~~M~~ 169 (173)
T 4afi_A 131 FLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKH 169 (173)
T ss_dssp HHHHHHHHHHHHHGGGGGTCCTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhchhhhhccCcchhHHHHHHHHHHHHH
Confidence 488999999999987654443444556777777655543
No 52
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=25.48 E-value=85 Score=16.78 Aligned_cols=38 Identities=26% Similarity=0.254 Sum_probs=26.6
Q ss_pred CCCHHHHHHHHHHhhhcCCC-cHHHHHHHhhcCCHHHHHH
Q 031538 10 TPSAAEDAEQLHKAFQGWGT-NEALIISVLAHRNAAQRKL 48 (158)
Q Consensus 10 ~~~~~~da~~L~~A~~g~gt-de~~l~~il~~rs~~ql~~ 48 (158)
.+.+++| +.|.++....|. +=..|...+.+||..|.+.
T Consensus 5 ~Wt~eED-~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~ 43 (52)
T 1gvd_A 5 PWTKEED-QRLIKLVQKYGPKRWSVIAKHLKGRIGKQCRE 43 (52)
T ss_dssp SCCHHHH-HHHHHHHHHHCTTCHHHHHTTSTTCCHHHHHH
T ss_pred CCCHHHH-HHHHHHHHHHCcChHHHHHHHcCCCCHHHHHH
Confidence 4677777 456777776555 4677777788899877654
No 53
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=24.98 E-value=1.9e+02 Score=22.97 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=21.4
Q ss_pred hHHHHhhh-cCcchHHHHHHhhcCCChhHHHHHHH
Q 031538 60 DLLKALDK-ELSSDFERSVLLWTLTPAERDAYLAN 93 (158)
Q Consensus 60 ~L~~~i~~-~~sG~~~~~l~~~~~~~~~~~a~~l~ 93 (158)
+.++.|.+ -+.|+++.++-.|+...-..||-.|-
T Consensus 145 ~~d~~I~~aLl~Gd~e~AV~~cl~~~r~adAllLA 179 (399)
T 2pm7_A 145 NIEQTISKNLVSGNIKSAVKNSLENDLMMEAMVIA 179 (399)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTTCHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHCCChHHHHHHH
Confidence 34555544 35788888887777655555555554
No 54
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=24.79 E-value=53 Score=24.37 Aligned_cols=50 Identities=14% Similarity=0.251 Sum_probs=35.5
Q ss_pred hHHHHHHHhhhccCCCcHHHHHHHHHhCCHHHHHHHHHHHHHhcCCCHHHHH
Q 031538 86 ERDAYLANEATKRFTLSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDV 137 (158)
Q Consensus 86 ~~~a~~l~~a~~g~gtd~~~li~il~~rs~~~l~~I~~~Y~~~y~~~L~~~I 137 (158)
+..-..+.+|+.-.|.|...|-+.+-+|+..+...-...|+++++ |++.+
T Consensus 138 eEE~~lFleAl~kYGKDW~~IAk~VgTKT~~QcKnfY~~~kKRln--LD~il 187 (235)
T 2iw5_B 138 TEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFN--IDEVL 187 (235)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHHSSCCHHHHHHHHHHTTTTTT--HHHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHHHHhh--HHHHH
Confidence 344556677887788999999999999998877665555555554 54444
No 55
>3frr_A Uncharacterized protein KIAA0174; ESCRT, ESCRT-III, CHMP, IST1, alternative splicing, phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3frs_A
Probab=22.15 E-value=39 Score=24.27 Aligned_cols=25 Identities=16% Similarity=0.170 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHhhc
Q 031538 116 RDLFAAKQAYHARYKKSLEEDVAYH 140 (158)
Q Consensus 116 ~~l~~I~~~Y~~~y~~~L~~~I~~~ 140 (158)
.||..|++.|..+||++........
T Consensus 117 pEL~~ir~~l~~KyGkeF~~~a~e~ 141 (191)
T 3frr_A 117 AELKIVADQLCAKYSKEYGKLCRTN 141 (191)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHhCHHHHHHHHHc
Confidence 6999999999999999998876654
No 56
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=21.44 E-value=1.1e+02 Score=25.17 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=36.1
Q ss_pred HHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHhhc
Q 031538 14 AEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYG 58 (158)
Q Consensus 14 ~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~~g 58 (158)
+.+...+.+++..-|.|=..|.+.+.++|..|.+.....|++.++
T Consensus 385 ~eE~~~f~~al~~yGkdw~~IA~~VgTKT~~Qvk~fy~~~kkr~~ 429 (482)
T 2xag_B 385 TEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFN 429 (482)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHSSCCHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHhCCCCHHHHHHHHHHHHHHhC
Confidence 455577778888778899999999999999999887766666655
No 57
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=21.26 E-value=1.3e+02 Score=17.20 Aligned_cols=39 Identities=28% Similarity=0.214 Sum_probs=25.5
Q ss_pred CCCCHHHHHHHHHHhhhcCCC-cHHHHHHHh--hcCCHHHHHH
Q 031538 9 QTPSAAEDAEQLHKAFQGWGT-NEALIISVL--AHRNAAQRKL 48 (158)
Q Consensus 9 ~~~~~~~da~~L~~A~~g~gt-de~~l~~il--~~rs~~ql~~ 48 (158)
....+++| +.|.++....|. +=..|.+-+ .+||+.|.+.
T Consensus 12 ~~WT~eED-~~L~~~V~~~G~~~W~~Ia~~~~~~~Rt~~qcr~ 53 (64)
T 3sjm_A 12 QKWTVEES-EWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKD 53 (64)
T ss_dssp CCCCHHHH-HHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHccCCCchHHHHhhcCCCCCCHHHHHH
Confidence 34677777 566777776554 445665543 4899988654
No 58
>3m03_A ORC6, origin recognition complex subunit 6; helix turn helix, DNA binding protein, origin recognition CO DNA replication; HET: MES; 2.50A {Homo sapiens}
Probab=21.26 E-value=1.6e+02 Score=18.50 Aligned_cols=47 Identities=6% Similarity=-0.023 Sum_probs=38.0
Q ss_pred CCCCHHHHHHHHHHhhhc--CCCcHHHHHHHhhcCCHHHHHHHHHHHHHh
Q 031538 9 QTPSAAEDAEQLHKAFQG--WGTNEALIISVLAHRNAAQRKLIREIYNET 56 (158)
Q Consensus 9 ~~~~~~~da~~L~~A~~g--~gtde~~l~~il~~rs~~ql~~i~~~Y~~~ 56 (158)
+.-.|..-|..++.|++- ...|...+++ +++-++.|++.+...+.+.
T Consensus 42 D~s~P~f~aaA~~~acr~~K~kVdK~KL~~-~s~lk~~~f~~l~~~~e~~ 90 (95)
T 3m03_A 42 DLSRPLFTSAALLSACKILKLKVDKNKMVA-TSGVKKAIFDRLCKQLEKI 90 (95)
T ss_dssp CTTSHHHHHHHHHHHHHHTTCCCCHHHHHH-TTCBCHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHccCCCHHHHHH-HHCCCHHHHHHHHHHHHHH
Confidence 444678889999999985 6789999998 5666899999998877754
No 59
>2jr2_A UPF0352 protein CPS_2611; dimer, all alpha helix, homodimer, structural genomics, PSI, structure initiative; NMR {Colwellia psychrerythraea} SCOP: a.284.1.1 PDB: 2ota_A
Probab=20.76 E-value=1.5e+02 Score=17.86 Aligned_cols=30 Identities=10% Similarity=0.345 Sum_probs=22.8
Q ss_pred HHHHhhcCCHHHHHHHHHHHHHhhchhHHH
Q 031538 34 IISVLAHRNAAQRKLIREIYNETYGEDLLK 63 (158)
Q Consensus 34 l~~il~~rs~~ql~~i~~~Y~~~~g~~L~~ 63 (158)
+..||.+-+++||+.|.+.|-+....++.+
T Consensus 41 vTnlln~V~~~qR~~iAe~Fa~AL~~Sv~~ 70 (76)
T 2jr2_A 41 VTNIIAQVPESKRVAVVDNFTKALKQSVLE 70 (76)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456777779999999999998766555443
No 60
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=24.81 E-value=23 Score=21.95 Aligned_cols=45 Identities=18% Similarity=0.135 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHHhhhcCCCcHHHHHHHhhcCCHHHHHHHHHHHHHh
Q 031538 11 PSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNET 56 (158)
Q Consensus 11 ~~~~~da~~L~~A~~g~gtde~~l~~il~~rs~~ql~~i~~~Y~~~ 56 (158)
+..++| +.|.++....|.+=..|...|.+||..|.+.-...|.+.
T Consensus 19 WT~eEd-~~l~~~~~~~G~~W~~IA~~l~gRt~~q~k~r~~~~lrk 63 (89)
T 2ltp_A 19 WTEEEM-GTAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKR 63 (89)
Confidence 344555 566777777777667777888889988776655555444
Done!