BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 031543
         (158 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8BLV3|SL9A7_MOUSE Sodium/hydrogen exchanger 7 OS=Mus musculus GN=Slc9a7 PE=2 SV=1
          Length = 726

 Score = 32.0 bits (71), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 8/46 (17%)

Query: 36  SLLMGVTKCMCFGRPLAPGGNRAWTIIYFMSSWAAFLVAEACLIAG 81
           +L+   TK  CF  PL        T ++F+ SW+ FL+AEAC   G
Sbjct: 346 ALVTKFTKLHCF--PLLE------TALFFLMSWSTFLLAEACGFTG 383


>sp|Q96T83|SL9A7_HUMAN Sodium/hydrogen exchanger 7 OS=Homo sapiens GN=SLC9A7 PE=1 SV=1
          Length = 725

 Score = 31.6 bits (70), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 20/68 (29%)

Query: 25  VGAFLFLLSSESLLMGV-----------TKCMCFGRPLAPGGNRAWTIIYFMSSWAAFLV 73
           VG FL + S  S  MG            TK  CF  PL        T ++F+ SW+ FL+
Sbjct: 324 VGIFLGIFSG-SFTMGAVTGVNANVTKFTKLHCF--PLLE------TALFFLMSWSTFLL 374

Query: 74  AEACLIAG 81
           AEAC   G
Sbjct: 375 AEACGFTG 382


>sp|P54208|CHLN_SYNE7 Light-independent protochlorophyllide reductase subunit N
           OS=Synechococcus elongatus (strain PCC 7942) GN=chlN
           PE=3 SV=1
          Length = 466

 Score = 30.4 bits (67), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 19  VATG-YGVGAFLFLLSSESLLMGVTKCMCFGR--PLAPGGNRAW 59
           +A G Y +G   FL  + + LM   KC   G   P+ P G+RAW
Sbjct: 240 IAEGSYAIGLNPFLSRTATTLMRRRKCKVIGAPFPIGPDGSRAW 283


>sp|Q5N5U2|CHLN_SYNP6 Light-independent protochlorophyllide reductase subunit N
           OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
           SAUG 1402/1) GN=chlN PE=3 SV=1
          Length = 466

 Score = 30.4 bits (67), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 19  VATG-YGVGAFLFLLSSESLLMGVTKCMCFGR--PLAPGGNRAW 59
           +A G Y +G   FL  + + LM   KC   G   P+ P G+RAW
Sbjct: 240 IAEGSYAIGLNPFLSRTATTLMRRRKCKVIGAPFPIGPDGSRAW 283


>sp|O45306|SRE21_CAEEL Serpentine receptor class epsilon-21 OS=Caenorhabditis elegans
          GN=sre-21 PE=3 SV=2
          Length = 365

 Score = 29.6 bits (65), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 9/70 (12%)

Query: 7  QSNATYCVYSSDVATGYGVGAFLFLLSSESLLMGVTKCMCFGRPLAPGGNRAWTIIYFMS 66
           SN  + V+       + +  FLFLLS     +GV    C G+   P  N  W II  M 
Sbjct: 38 NSNREFSVFE------FILINFLFLLSIFVTFIGV---FCIGKSNIPHRNARWIIISGML 88

Query: 67 SWAAFLVAEA 76
           W   +V+ +
Sbjct: 89 LWLELVVSRS 98


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.132    0.403 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,059,814
Number of Sequences: 539616
Number of extensions: 1739894
Number of successful extensions: 4665
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 4655
Number of HSP's gapped (non-prelim): 15
length of query: 158
length of database: 191,569,459
effective HSP length: 108
effective length of query: 50
effective length of database: 133,290,931
effective search space: 6664546550
effective search space used: 6664546550
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.2 bits)