BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031551
MGFFSFLGRVLFASLFILSAWQMFNDFGVDGGPAAKELIPKLAVAKKHISKLLGIAIPDV
EVRHVVATNIFLKGVGGFLFVFGNSFGAFLLLVYVALSSPLLYDFYNYSPKHPEFTPLLN
EFLQSIAIFGALLFFIGMKNSLPRRQHKKKAPKAKAN

High Scoring Gene Products

Symbol, full name Information P value
AT1G04340 protein from Arabidopsis thaliana 3.1e-44
AT5G43460 protein from Arabidopsis thaliana 9.3e-43
AT4G14420 protein from Arabidopsis thaliana 1.5e-33
AT3G23190 protein from Arabidopsis thaliana 2.0e-08
AT3G23180 protein from Arabidopsis thaliana 3.0e-07
AT3G23175 protein from Arabidopsis thaliana 3.8e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031551
        (157 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2018364 - symbol:AT1G04340 "AT1G04340" species...   466  3.1e-44   1
TAIR|locus:2176476 - symbol:AT5G43460 "AT5G43460" species...   452  9.3e-43   1
TAIR|locus:2129720 - symbol:AT4G14420 "AT4G14420" species...   365  1.5e-33   1
TAIR|locus:2086248 - symbol:AT3G23190 "AT3G23190" species...    88  2.0e-08   2
TAIR|locus:2086238 - symbol:AT3G23180 "AT3G23180" species...    86  3.0e-07   2
TAIR|locus:504955777 - symbol:AT3G23175 "AT3G23175" speci...   116  3.8e-07   1


>TAIR|locus:2018364 [details] [associations]
            symbol:AT1G04340 "AT1G04340" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] Pfam:PF05514 EMBL:CP002684 GenomeReviews:CT485782_GR
            EMBL:AC000104 EMBL:AY070751 EMBL:AY093738 IPI:IPI00520851
            PIR:H86174 RefSeq:NP_171929.1 UniGene:At.28333 IntAct:O22690
            STRING:O22690 PaxDb:O22690 PRIDE:O22690 EnsemblPlants:AT1G04340.1
            GeneID:839547 KEGG:ath:AT1G04340 TAIR:At1g04340 eggNOG:NOG151030
            HOGENOM:HOG000239736 InParanoid:O22690 OMA:PEDRQFS PhylomeDB:O22690
            ProtClustDB:CLSN2681782 Genevestigator:O22690 InterPro:IPR008637
            Uniprot:O22690
        Length = 159

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 93/158 (58%), Positives = 114/158 (72%)

Query:     1 MGFFSFLGRVLFASLFILSAWQMFNDFGVDGGPAAKELIPKLAVAKKHISKLLGIAIPDV 60
             MGFFSFLGRVLFASLFILSAWQMFNDFG DGGPAAKEL PKL + K H+S +LG+++P++
Sbjct:     1 MGFFSFLGRVLFASLFILSAWQMFNDFGTDGGPAAKELAPKLDLTKAHLSSILGVSLPNL 60

Query:    61 EVRHVVATNIXXXXXXXXXXXXXXXXXAFLLLVYVALSSPLLYDFYNYSPKHPEFTPLLN 120
             EV+ VV   +                 A+LL VY+ + SP+LYDFYNY P+  +F+ LL 
Sbjct:    61 EVKQVVWAIVALKGLGGLLFVIGNIFGAYLLAVYLVVVSPILYDFYNYGPEDRQFSLLLT 120

Query:   121 EFLQSIAIFGALLFFIGMKNSLP--RRQHKKKAPKAKA 156
             EFLQS+A+ GALLFFIGMKNS    +R  KK+ PK KA
Sbjct:   121 EFLQSVALLGALLFFIGMKNSTTSSKRILKKRTPKPKA 158


>TAIR|locus:2176476 [details] [associations]
            symbol:AT5G43460 "AT5G43460" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=RCA] Pfam:PF05514
            GO:GO:0005783 EMBL:CP002688 EMBL:AB025638 ProtClustDB:CLSN2681782
            InterPro:IPR008637 EMBL:AY057586 EMBL:BT010160 IPI:IPI00541647
            RefSeq:NP_199159.1 UniGene:At.7158 IntAct:Q9LSW5 STRING:Q9LSW5
            EnsemblPlants:AT5G43460.1 GeneID:834366 KEGG:ath:AT5G43460
            TAIR:At5g43460 InParanoid:Q9LSW5 OMA:PQERHFS PhylomeDB:Q9LSW5
            Genevestigator:Q9LSW5 Uniprot:Q9LSW5
        Length = 154

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 93/157 (59%), Positives = 110/157 (70%)

Query:     1 MGFFSFLGRVLFASLFILSAWQMFNDFGVDGGPAAKELIPKLAVAKKHISKLLGIAIPDV 60
             MGFFSFLGRVLFASLFILSAWQMFND    GGPAAKEL PKL + K H+S  LG+ +P +
Sbjct:     1 MGFFSFLGRVLFASLFILSAWQMFND----GGPAAKELAPKLDLVKAHLSSRLGVTLPKI 56

Query:    61 EVRHVVATNIXXXXXXXXXXXXXXXXXAFLLLVYVALSSPLLYDFYNYSPKHPEFTPLLN 120
             EVR VVAT I                 A+LL  Y+ +  P+LYDFYNY P+   F+ LL 
Sbjct:    57 EVRQVVATIIALKGVGGLLFVIGNTFGAYLLASYLVVFGPILYDFYNYGPQERHFSLLLT 116

Query:   121 EFLQSIAIFGALLFFIGMKNSLPRRQH-KKKAPKAKA 156
             EFLQS+A+FGALLFFIGMKNS P +++ KK+ PK KA
Sbjct:   117 EFLQSVALFGALLFFIGMKNSTPAKKNLKKRTPKPKA 153


>TAIR|locus:2129720 [details] [associations]
            symbol:AT4G14420 "AT4G14420" species:3702 "Arabidopsis
            thaliana" [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006457 "protein
            folding" evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
            [GO:0009627 "systemic acquired resistance" evidence=RCA]
            [GO:0009644 "response to high light intensity" evidence=RCA]
            [GO:0034976 "response to endoplasmic reticulum stress"
            evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
            evidence=RCA] Pfam:PF05514 GO:GO:0005783 GO:GO:0005794
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z97336 EMBL:AL161539
            HOGENOM:HOG000239736 ProtClustDB:CLSN2681782 InterPro:IPR008637
            EMBL:AY045601 EMBL:AY090326 EMBL:AY085699 IPI:IPI00521447
            PIR:C71406 RefSeq:NP_193178.1 UniGene:At.4273 STRING:O23298
            PaxDb:O23298 PRIDE:O23298 EnsemblPlants:AT4G14420.1 GeneID:827087
            KEGG:ath:AT4G14420 TAIR:At4g14420 eggNOG:NOG299458
            InParanoid:O23298 OMA:DFYNYDV PhylomeDB:O23298 ArrayExpress:O23298
            Genevestigator:O23298 Uniprot:O23298
        Length = 158

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 77/158 (48%), Positives = 99/158 (62%)

Query:     1 MGFFSFLGRVLFASLFILSAWQMFNDFGVDGGPAAKELIPKLAVAKKHISKLLGIAIPDV 60
             M   SFLGR LF S+F+LSAWQ FNDFG DGG +AK L PK      H++   G  +P V
Sbjct:     1 MELASFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPV 60

Query:    61 EVRHVVATNIXXXXXXXXXXXXXXXXXAFLLLVYVALSSPLLYDFYNYSPKHPEFTPLLN 120
             +++ +VA  I                 A+LLL++ A+++P+LYDFYNY     EF  L +
Sbjct:    61 DMKILVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFS 120

Query:   121 EFLQSIAIFGALLFFIGMKNSLPR-RQHKKKAPKAKAN 157
             +F QS+A+ G LLFFIGMKNS    RQ +KKAPKAKAN
Sbjct:   121 KFTQSLALLGGLLFFIGMKNSRKHGRQLRKKAPKAKAN 158


>TAIR|locus:2086248 [details] [associations]
            symbol:AT3G23190 "AT3G23190" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            [GO:0006826 "iron ion transport" evidence=RCA] [GO:0009736
            "cytokinin mediated signaling pathway" evidence=RCA] [GO:0010106
            "cellular response to iron ion starvation" evidence=RCA]
            [GO:0010167 "response to nitrate" evidence=RCA] [GO:0015706
            "nitrate transport" evidence=RCA] Pfam:PF05514 GO:GO:0005783
            EMBL:CP002686 EMBL:AB025608 InterPro:IPR008637 EMBL:BT012182
            IPI:IPI00547406 RefSeq:NP_188960.1 UniGene:At.27638 PRIDE:Q9LTC9
            EnsemblPlants:AT3G23190.1 GeneID:821897 KEGG:ath:AT3G23190
            TAIR:At3g23190 OMA:SAWREYY PhylomeDB:Q9LTC9 ProtClustDB:CLSN2684307
            Genevestigator:Q9LTC9 Uniprot:Q9LTC9
        Length = 216

 Score = 88 (36.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query:     8 GRVLFASLFILSAWQMFNDFGVDGGPAAKELIPKLAVAKKHISKLLGIAI 57
             GRV+FAS F++SAW+ +  FG+    AA EL PKL   +     ++ + I
Sbjct:    25 GRVVFASAFLVSAWREYYGFGL----AADELRPKLGFFENQAKAIVALGI 70

 Score = 85 (35.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
 Identities = 18/39 (46%), Positives = 23/39 (58%)

Query:    88 AFLLLVYVALSSPLLYDFYNYSPKHPEFTPLLNEFLQSI 126
             A LLLVY A+ SP+LYDFYN       FT    +F + +
Sbjct:    88 AALLLVYQAILSPILYDFYNRDYDRDHFTVFYTKFKEFV 126

 Score = 54 (24.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query:    95 VALSSPLLYDFYNYSPKHPEFTPLLNEFLQSIAIFGALLFFIGMKN 140
             +A+S+PL      ++P   +F  L   F++ + I  AL  FI MK+
Sbjct:   163 IAISNPL------FTPS--DFNTLFIRFIKGVGIAAALACFIAMKH 200


>TAIR|locus:2086238 [details] [associations]
            symbol:AT3G23180 "AT3G23180" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0006952 "defense response"
            evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] Pfam:PF05514 GO:GO:0005783
            EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB025608
            InterPro:IPR008637 ProtClustDB:CLSN2684307 IPI:IPI00520241
            RefSeq:NP_188959.3 UniGene:At.53450 PaxDb:Q9LTD0 PRIDE:Q9LTD0
            EnsemblPlants:AT3G23180.1 GeneID:821896 KEGG:ath:AT3G23180
            TAIR:At3g23180 eggNOG:NOG250612 HOGENOM:HOG000153095 OMA:ELADHAM
            PhylomeDB:Q9LTD0 Genevestigator:Q9LTD0 Uniprot:Q9LTD0
        Length = 217

 Score = 86 (35.3 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
 Identities = 28/109 (25%), Positives = 47/109 (43%)

Query:     7 LGRVLFASLFILSAWQMFNDFGVDGGPAAKELIPKLAVAKKHISKLLGIAIPDVEVRHVV 66
             +GR LFAS F LS+W  + +   +         PK   +        G    D +++H++
Sbjct:    24 IGRALFASSFFLSSWHDYMELKANWNGTEDYWSPKFGYS--------G----D-QIKHLM 70

Query:    67 ATNIXXXXXXXXXXXXXXXXXAFLLLVYVALSSPLLYDFYNYSPKHPEF 115
               +I                 AFLLL+Y  +++ + +DFYN+     EF
Sbjct:    71 TVSIIVRTLGGLIFIYGSFFGAFLLLMYQGIATMVHHDFYNHRLDTEEF 119

 Score = 77 (32.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
 Identities = 16/39 (41%), Positives = 24/39 (61%)

Query:   112 HPEFTPLLNEFLQSIAIFGALLFFIGMKNSLPRRQHKKK 150
             H EF   L  F++ +A+ GALLFF+ MK  L + + + K
Sbjct:   175 HNEFLRRLLSFVKGLAVVGALLFFVDMKYRLNKAKKQSK 213


>TAIR|locus:504955777 [details] [associations]
            symbol:AT3G23175 "AT3G23175" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            Pfam:PF05514 GO:GO:0005783 EMBL:CP002686 GenomeReviews:BA000014_GR
            InterPro:IPR008637 EMBL:BT005400 EMBL:AY208189 EMBL:AY954849
            EMBL:AK117603 IPI:IPI00527682 RefSeq:NP_683584.2 UniGene:At.45104
            PaxDb:Q8GYI3 PRIDE:Q8GYI3 EnsemblPlants:AT3G23175.1 GeneID:821895
            KEGG:ath:AT3G23175 TAIR:At3g23175 eggNOG:NOG267349
            HOGENOM:HOG000148339 InParanoid:Q8GYI3 OMA:ITAIQDY PhylomeDB:Q8GYI3
            ProtClustDB:CLSN2918191 Genevestigator:Q8GYI3 Uniprot:Q8GYI3
        Length = 169

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 41/156 (26%), Positives = 71/156 (45%)

Query:     1 MGFFSFLGRVLFASLFILSAWQMFNDF--GVDGGPAAKELIPKLAVAKKHISKLL----G 54
             M   +F GR+ F+ +F ++A Q + D   G  GGP  K + P + +  K+ SK L    G
Sbjct:    20 MPAIAFFGRMAFSFVFFITAIQDYADHYGGGAGGPLEKTMGPAVNMLSKYGSKALTFYFG 79

Query:    55 IAIPDVEVRHVVATNIXXXXXXXXXXXXXXXXXAFLLLVYVALSSPLLYDFYNYSPKHPE 114
             + +   +VR +    I                 A+ LL     S+ +           P 
Sbjct:    80 MQVVAFDVRLIEFALISAKATAALWFIFGQSIPAYFLLATQIFSTVI-----------P- 127

Query:   115 FTPLLNEFLQSIAIFGALLFFIGMKNSLPRRQHKKK 150
             F   LN+F Q++ + GALL++IG+K+++     ++K
Sbjct:   128 FPTNLNDFTQNLTLIGALLYYIGLKHTVDNLDDEEK 163


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.142   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      157       140   0.00091  102 3  11 22  0.50    30
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  571 (61 KB)
  Total size of DFA:  126 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.21u 0.16s 13.37t   Elapsed:  00:00:01
  Total cpu time:  13.21u 0.16s 13.37t   Elapsed:  00:00:01
  Start:  Sat May 11 06:51:19 2013   End:  Sat May 11 06:51:20 2013

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