Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>031557
MASTSAFTAQISSIHWKKPTSSSNFSNNLNLNSNLAGKEMLSFSSQQKSGHQFRSLRVYG
LFGGKKDNNEKGDDAPSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCE
GELIKVTLSGNQQPVRTEITEAAMELGAEVKTFTLSY

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031557
        (157 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2118721 - symbol:AT4G30620 "AT4G30620" species...   412  1.6e-38   1
TAIR|locus:2061471 - symbol:AT2G24020 "AT2G24020" species...   410  2.6e-38   1


>TAIR|locus:2118721 [details] [associations]
            symbol:AT4G30620 "AT4G30620" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
            [GO:0019243 "methylglyoxal catabolic process to D-lactate"
            evidence=RCA] GO:GO:0009570 EMBL:CP002687 GO:GO:0009941
            EMBL:AL161577 Gene3D:3.30.1310.10 InterPro:IPR004401 Pfam:PF02575
            SUPFAM:SSF82607 UniGene:At.31819 UniGene:At.4582 HSSP:P17577
            ProtClustDB:CLSN2915951 EMBL:AY074869 EMBL:BT020301 EMBL:BT025534
            IPI:IPI00533495 PIR:C85358 RefSeq:NP_194791.1
            ProteinModelPortal:Q9M098 SMR:Q9M098 STRING:Q9M098 PRIDE:Q9M098
            EnsemblPlants:AT4G30620.1 GeneID:829185 KEGG:ath:AT4G30620
            TAIR:At4g30620 InParanoid:Q9M098 OMA:LAMKERM PhylomeDB:Q9M098
            ArrayExpress:Q9M098 Genevestigator:Q9M098 Uniprot:Q9M098
        Length = 180

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 84/115 (73%), Positives = 100/115 (86%)

Query:    36 AGKEMLSFSSQQKSGHQFRSLRVYGLFGG-KKDNNEKGDDAPSKAGILGNMQNLYETVKK 94
             + ++ + + ++++SG+  RSLRV GLFGG KKDN E G    SKAGILGNMQNLYETVKK
Sbjct:    27 SSRQNIVWLNRKQSGNNNRSLRVNGLFGGGKKDNKEDGQ---SKAGILGNMQNLYETVKK 83

Query:    95 AQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAE 149
             AQMVVQVEAVRVQKELA AEFDGYC+GEL+KVTLSGNQQP+RT+IT+AAMELG+E
Sbjct:    84 AQMVVQVEAVRVQKELAVAEFDGYCQGELVKVTLSGNQQPIRTDITDAAMELGSE 138


>TAIR|locus:2061471 [details] [associations]
            symbol:AT2G24020 "AT2G24020" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
            evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
            [GO:0019243 "methylglyoxal catabolic process to D-lactate"
            evidence=RCA] GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0009941 GO:GO:0009535 EMBL:AC005170 Gene3D:3.30.1310.10
            InterPro:IPR004401 Pfam:PF02575 SUPFAM:SSF82607 eggNOG:COG0718
            TIGRFAMs:TIGR00103 EMBL:AY048234 EMBL:AY091702 IPI:IPI00520224
            PIR:F84631 RefSeq:NP_565561.1 UniGene:At.25545 HSSP:P17577
            ProteinModelPortal:O82230 SMR:O82230 IntAct:O82230 STRING:O82230
            PaxDb:O82230 PRIDE:O82230 ProMEX:O82230 EnsemblPlants:AT2G24020.1
            GeneID:816936 KEGG:ath:AT2G24020 TAIR:At2g24020
            HOGENOM:HOG000293241 InParanoid:O82230 OMA:GNQQPVR PhylomeDB:O82230
            ProtClustDB:CLSN2915951 ArrayExpress:O82230 Genevestigator:O82230
            Uniprot:O82230
        Length = 182

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 84/109 (77%), Positives = 94/109 (86%)

Query:    42 SFSSQQKSGHQFRSLRVYGLFGG-KKDNNEKGDDAPSKAGILGNMQNLYETVKKAQMVVQ 100
             ++  Q KS + +RSLRV GLFGG  KDNN   +D  SKAGI GNMQN+YETVKKAQMVVQ
Sbjct:    33 TWPKQYKSKNGYRSLRVNGLFGGGNKDNNS--EDGQSKAGIFGNMQNMYETVKKAQMVVQ 90

Query:   101 VEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAE 149
             VEAVRVQKELAAAEFDGYC GEL+KVTLSGNQQP+RT+ITEAAMELG+E
Sbjct:    91 VEAVRVQKELAAAEFDGYCAGELVKVTLSGNQQPIRTDITEAAMELGSE 139


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.126   0.345    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      157       142   0.00091  102 3  11 23  0.50    31
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  573 (61 KB)
  Total size of DFA:  122 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.46u 0.17s 13.63t   Elapsed:  00:00:01
  Total cpu time:  13.46u 0.17s 13.63t   Elapsed:  00:00:01
  Start:  Sat May 11 07:00:37 2013   End:  Sat May 11 07:00:38 2013

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