BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031559
(157 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q75IR6|ALFL1_ORYSJ PHD finger protein ALFIN-LIKE 1 OS=Oryza sativa subsp. japonica
GN=Os05g0163100 PE=2 SV=1
Length = 258
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 133/154 (86%), Gaps = 2/154 (1%)
Query: 5 SSPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEE 64
S+PR+VE+I+KDF ARR ++RALT+DV++FY CDP+KENLCLYG+ NE+W+V LPAEE
Sbjct: 21 SAPRSVEDIFKDFRARRTAILRALTHDVEDFYAQCDPEKENLCLYGYANEAWQVALPAEE 80
Query: 65 VPPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGARLNRNERKRLFSLIN 124
VP ELPEPALGINFARDGMNR+DWL+LVAVH+DSWL+SVAFY ARLNRN+RKRLF ++N
Sbjct: 81 VPTELPEPALGINFARDGMNRRDWLALVAVHSDSWLVSVAFYYAARLNRNDRKRLFGMMN 140
Query: 125 DQPTVFEVVTERKPIK--DKPSVDSSSKSRGSTK 156
D PTV+EVV+ + K D+ +D+SS+++ S+K
Sbjct: 141 DLPTVYEVVSGSRQSKERDRSGMDNSSRNKISSK 174
>sp|A2Y0Q2|ALFL1_ORYSI PHD finger protein ALFIN-LIKE 1 OS=Oryza sativa subsp. indica
GN=OsI_18576 PE=3 SV=1
Length = 258
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 133/154 (86%), Gaps = 2/154 (1%)
Query: 5 SSPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEE 64
S+PR+VE+I+KDF ARR ++RALT+DV++FY CDP+KENLCLYG+ NE+W+V LPAEE
Sbjct: 21 SAPRSVEDIFKDFRARRTAILRALTHDVEDFYAQCDPEKENLCLYGYANEAWQVALPAEE 80
Query: 65 VPPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGARLNRNERKRLFSLIN 124
VP ELPEPALGINFARDGMNR+DWL+LVAVH+DSWL+SVAFY ARLNRN+RKRLF ++N
Sbjct: 81 VPTELPEPALGINFARDGMNRRDWLALVAVHSDSWLVSVAFYYAARLNRNDRKRLFGMMN 140
Query: 125 DQPTVFEVVTERKPIK--DKPSVDSSSKSRGSTK 156
D PTV+EVV+ + K D+ +D+SS+++ S+K
Sbjct: 141 DLPTVYEVVSGSRQSKERDRSGMDNSSRNKISSK 174
>sp|Q9FFF5|ALFL1_ARATH PHD finger protein ALFIN-LIKE 1 OS=Arabidopsis thaliana GN=AL1 PE=1
SV=1
Length = 241
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/154 (78%), Positives = 134/154 (87%), Gaps = 1/154 (0%)
Query: 4 ASSPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAE 63
+S+PRTVEEI+KDF RR+G +RAL+ DVD+FY LCDP+ ENLCLYGHPN +WEV LPAE
Sbjct: 5 SSNPRTVEEIFKDFSGRRSGFLRALSVDVDKFYSLCDPEMENLCLYGHPNGTWEVNLPAE 64
Query: 64 EVPPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGARLNRNERKRLFSLI 123
EVPPELPEPALGINFARDGM RKDWLSLVAVH+D WLLSV+ Y GARLNRNERKRLFSLI
Sbjct: 65 EVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSSYFGARLNRNERKRLFSLI 124
Query: 124 NDQPTVFEVVTERKPIKD-KPSVDSSSKSRGSTK 156
ND PT+FEVVT RKPIKD KPS+D SKSR K
Sbjct: 125 NDLPTLFEVVTGRKPIKDGKPSMDLGSKSRNGVK 158
>sp|Q84TV4|ALFL3_ORYSJ PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. japonica
GN=Os03g0818300 PE=2 SV=1
Length = 247
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/155 (74%), Positives = 137/155 (88%)
Query: 2 EMASSPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLP 61
++AS+PRTVE+I+KD+ ARR +VRALT+DVDEF+GLCDPDKENLCLYG N SWEV LP
Sbjct: 8 QVASNPRTVEDIFKDYSARRGALVRALTSDVDEFFGLCDPDKENLCLYGLANGSWEVALP 67
Query: 62 AEEVPPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGARLNRNERKRLFS 121
AEEVPPELPEPALGINFARDGMNR+DWLSLVAVH+DSWL+SVAF+ ARLN NERKRLF+
Sbjct: 68 AEEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLVSVAFFFAARLNGNERKRLFN 127
Query: 122 LINDQPTVFEVVTERKPIKDKPSVDSSSKSRGSTK 156
+IND PTV+E + +RK ++D+ VDSS KS+ STK
Sbjct: 128 MINDLPTVYEALVDRKHVRDRSGVDSSGKSKHSTK 162
>sp|B8AMA8|ALFL3_ORYSI PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. indica
GN=OsI_14081 PE=3 SV=2
Length = 247
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/155 (74%), Positives = 137/155 (88%)
Query: 2 EMASSPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLP 61
++AS+PRTVE+I+KD+ ARR +VRALT+DVDEF+GLCDPDKENLCLYG N SWEV LP
Sbjct: 8 QVASNPRTVEDIFKDYSARRGALVRALTSDVDEFFGLCDPDKENLCLYGLANGSWEVALP 67
Query: 62 AEEVPPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGARLNRNERKRLFS 121
AEEVPPELPEPALGINFARDGMNR+DWLSLVAVH+DSWL+SVAF+ ARLN NERKRLF+
Sbjct: 68 AEEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLVSVAFFFAARLNGNERKRLFN 127
Query: 122 LINDQPTVFEVVTERKPIKDKPSVDSSSKSRGSTK 156
+IND PTV+E + +RK ++D+ VDSS KS+ STK
Sbjct: 128 MINDLPTVYEALVDRKHVRDRSGVDSSGKSKHSTK 162
>sp|Q8H383|ALFL2_ORYSJ PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. japonica
GN=Os07g0233300 PE=2 SV=1
Length = 244
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/161 (75%), Positives = 136/161 (84%), Gaps = 5/161 (3%)
Query: 1 MEMAS----SPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESW 56
MEMA+ +PRTVE+I+KDF RRAG+VRALT DVDEFYG CDP+KENLCLYGHPN W
Sbjct: 1 MEMAAPVSPAPRTVEDIFKDFSGRRAGLVRALTVDVDEFYGFCDPEKENLCLYGHPNGRW 60
Query: 57 EVTLPAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGARLNRNER 116
EV LPAEEVPPELPEPALGINFARDGM+R+DWLSLVAVH+DSWLLSVAF+ GARLN NER
Sbjct: 61 EVALPAEEVPPELPEPALGINFARDGMHRRDWLSLVAVHSDSWLLSVAFFFGARLNGNER 120
Query: 117 KRLFSLINDQPTVFEVVTERKPIKD-KPSVDSSSKSRGSTK 156
KRLFSLIND PTV E +++RK +D K D+ SKSR S K
Sbjct: 121 KRLFSLINDHPTVLEALSDRKHGRDNKSGADNGSKSRHSGK 161
>sp|B8B8I3|ALFL2_ORYSI PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. indica
GN=OsI_25444 PE=3 SV=1
Length = 244
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/161 (75%), Positives = 136/161 (84%), Gaps = 5/161 (3%)
Query: 1 MEMAS----SPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESW 56
MEMA+ +PRTVE+I+KDF RRAG+VRALT DVDEFYG CDP+KENLCLYGHPN W
Sbjct: 1 MEMAAPVSPAPRTVEDIFKDFSGRRAGLVRALTVDVDEFYGFCDPEKENLCLYGHPNGRW 60
Query: 57 EVTLPAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGARLNRNER 116
EV LPAEEVPPELPEPALGINFARDGM+R+DWLSLVAVH+DSWLLSVAF+ GARLN NER
Sbjct: 61 EVALPAEEVPPELPEPALGINFARDGMHRRDWLSLVAVHSDSWLLSVAFFFGARLNGNER 120
Query: 117 KRLFSLINDQPTVFEVVTERKPIKD-KPSVDSSSKSRGSTK 156
KRLFSLIND PTV E +++RK +D K D+ SKSR S K
Sbjct: 121 KRLFSLINDHPTVLEALSDRKHGRDNKSGADNGSKSRHSGK 161
>sp|Q9SRM4|ALFL2_ARATH PHD finger protein ALFIN-LIKE 2 OS=Arabidopsis thaliana GN=AL2 PE=2
SV=1
Length = 246
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/155 (80%), Positives = 138/155 (89%), Gaps = 1/155 (0%)
Query: 3 MASSPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPA 62
++S+PRTVEEI+KD+ ARRA ++RALT DVD+FY CDP+KENLCLYGHPNESWEV LPA
Sbjct: 6 VSSNPRTVEEIFKDYSARRAALLRALTKDVDDFYSQCDPEKENLCLYGHPNESWEVNLPA 65
Query: 63 EEVPPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGARLNRNERKRLFSL 122
EEVPPELPEPALGINFARDGM RKDWLSLVAVH+D WLLSV+FY GARLNRNERKRLFSL
Sbjct: 66 EEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSFYFGARLNRNERKRLFSL 125
Query: 123 INDQPTVFEVVTERKPIKD-KPSVDSSSKSRGSTK 156
IND PT+F+VVT RK +KD KPS DS SKSR TK
Sbjct: 126 INDLPTLFDVVTGRKAMKDNKPSSDSGSKSRNGTK 160
>sp|Q7XUW3|ALFL4_ORYSJ PHD finger protein ALFIN-LIKE 4 OS=Oryza sativa subsp. japonica
GN=Os04g0444900 PE=2 SV=2
Length = 256
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/149 (61%), Positives = 116/149 (77%), Gaps = 2/149 (1%)
Query: 8 RTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEVPP 67
R+ E++++DFC RR+G+V+ALT +V++FY CDP+KENLCLYG PN +W VTLPA+EVPP
Sbjct: 15 RSPEDVFQDFCGRRSGIVKALTIEVEKFYKQCDPEKENLCLYGLPNGTWAVTLPADEVPP 74
Query: 68 ELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKRLFSLIND 125
ELPEPALGINFARDGM KDWLSL+AVH+DSWLLSVAFY GAR ++ R+RLF + +
Sbjct: 75 ELPEPALGINFARDGMQEKDWLSLIAVHSDSWLLSVAFYFGARFGFDKKARERLFMMTSS 134
Query: 126 QPTVFEVVTERKPIKDKPSVDSSSKSRGS 154
PTVFEVV+ + K + SS GS
Sbjct: 135 LPTVFEVVSGGVNTQSKTANGSSKNKSGS 163
>sp|A2XTW9|ALFL4_ORYSI PHD finger protein ALFIN-LIKE 4 OS=Oryza sativa subsp. indica
GN=OsI_16049 PE=3 SV=1
Length = 256
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 91/149 (61%), Positives = 115/149 (77%), Gaps = 2/149 (1%)
Query: 8 RTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEVPP 67
R+ E++++DFC RR+G+V+ALT +V++FY CDP+KENLCLYG PN +W VTLPA+EVPP
Sbjct: 15 RSPEDVFQDFCGRRSGIVKALTIEVEKFYKQCDPEKENLCLYGLPNGTWAVTLPADEVPP 74
Query: 68 ELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKRLFSLIND 125
ELPEPALG NFARDGM KDWLSL+AVH+DSWLLSVAFY GAR ++ R+RLF + +
Sbjct: 75 ELPEPALGHNFARDGMQEKDWLSLIAVHSDSWLLSVAFYFGARFGFDKKARERLFMMTSS 134
Query: 126 QPTVFEVVTERKPIKDKPSVDSSSKSRGS 154
PTVFEVV+ + K + SS GS
Sbjct: 135 LPTVFEVVSGGVNTQSKTANGSSKNKSGS 163
>sp|Q9M2B4|ALFL3_ARATH PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana GN=AL3 PE=2
SV=1
Length = 250
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 126/156 (80%), Gaps = 4/156 (2%)
Query: 6 SPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEV 65
+PRTVEE++KDF RR +V+ALT DV EFY CDP+KENLCLYG PNE WEV LPAEEV
Sbjct: 9 NPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWEVNLPAEEV 68
Query: 66 PPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKRLFSLI 123
PPELPEPALGINFARDG++ K+WLSLVA+H+D+WLLSV+FY G+R ++ ERKRLF++I
Sbjct: 69 PPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEERKRLFNMI 128
Query: 124 NDQPTVFEVVTERKPIKDKPSV--DSSSKSRGSTKV 157
ND PT+FEVVT KDK S + +KS+ ++KV
Sbjct: 129 NDVPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKV 164
>sp|Q7F2Z1|ALFL6_ORYSJ PHD finger protein ALFIN-LIKE 6 OS=Oryza sativa subsp. japonica
GN=Os01g0887700 PE=2 SV=1
Length = 272
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/168 (61%), Positives = 130/168 (77%), Gaps = 16/168 (9%)
Query: 6 SPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEV 65
+ RT EE+++D RRAG+++ALT DV++FY LCDP+KENLCLYG+PNE+WEVTLPAEEV
Sbjct: 26 ATRTAEEVFRDLRGRRAGMIKALTTDVEKFYKLCDPEKENLCLYGYPNETWEVTLPAEEV 85
Query: 66 PPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKRLFSLI 123
PPE+PEPALGINFARDGMN KDWL+LVAVH+DSWLLSVAFY GAR +R R+RLF++I
Sbjct: 86 PPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFNMI 145
Query: 124 NDQPTVFEVVT--ERKPIKDKP------------SVDSSSKSRGSTKV 157
N+ PT+FEVVT +K K+K V S ++SR +K+
Sbjct: 146 NNLPTIFEVVTGAAKKQAKEKTPNSSSKSNKPSSKVQSKAESRSKSKL 193
>sp|Q6YTY3|ALFL9_ORYSJ PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica
GN=Os07g0608400 PE=2 SV=1
Length = 278
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 119/142 (83%), Gaps = 2/142 (1%)
Query: 1 MEMASSPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTL 60
M+ +PRTVEE+++DF RRAG+VRALT DV++F+ CDP+KENLCLYG PNE WEV L
Sbjct: 1 MDAQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNL 60
Query: 61 PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKR 118
PAEEVPPELPEPALGINFARDGM KDWLS+VAVH+D+WLLSVAFY GAR ++N+RKR
Sbjct: 61 PAEEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKR 120
Query: 119 LFSLINDQPTVFEVVTERKPIK 140
LF +IND PT+FEVV+ + K
Sbjct: 121 LFGMINDLPTIFEVVSGKSKAK 142
>sp|B8B8C5|ALFL9_ORYSI PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica
GN=OsI_26819 PE=3 SV=1
Length = 277
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 119/142 (83%), Gaps = 2/142 (1%)
Query: 1 MEMASSPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTL 60
M+ +PRTVEE+++DF RRAG+VRALT DV++F+ CDP+KENLCLYG PNE WEV L
Sbjct: 1 MDAQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNL 60
Query: 61 PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKR 118
PAEEVPPELPEPALGINFARDGM KDWLS+VAVH+D+WLLSVAFY GAR ++N+RKR
Sbjct: 61 PAEEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKR 120
Query: 119 LFSLINDQPTVFEVVTERKPIK 140
LF +IND PT+FEVV+ + K
Sbjct: 121 LFGMINDLPTIFEVVSGKSKAK 142
>sp|A2WXR5|ALFL6_ORYSI PHD finger protein ALFIN-LIKE 6 OS=Oryza sativa subsp. indica
GN=OsI_04717 PE=3 SV=1
Length = 272
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/168 (61%), Positives = 130/168 (77%), Gaps = 16/168 (9%)
Query: 6 SPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEV 65
+ RT EE+++D RRAG+++ALT DV++FY LCDP+KENLCLYG+PNE+WEVTLPAEEV
Sbjct: 26 ATRTAEEVFRDLRGRRAGMIKALTTDVEKFYKLCDPEKENLCLYGYPNETWEVTLPAEEV 85
Query: 66 PPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKRLFSLI 123
PPE+PEPALGINFARDGMN KDWL+LVAVH+DSWLLSVAFY GAR +R R+RLF++I
Sbjct: 86 PPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFNMI 145
Query: 124 NDQPTVFEVVT--ERKPIKDKP------------SVDSSSKSRGSTKV 157
N+ PT+FEVVT +K K+K V S ++SR +K+
Sbjct: 146 NNLPTIFEVVTGAAKKQAKEKTPNSSSKSNKPSSKVQSKAESRSKSKL 193
>sp|Q8S8M9|ALFL6_ARATH PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana GN=AL6 PE=2
SV=1
Length = 256
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 123/151 (81%), Gaps = 3/151 (1%)
Query: 7 PRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEVP 66
PRTVEE++ DF RRAG+++ALTND+ +FY CDP+KENLCLYG PNE+WEV LP EEVP
Sbjct: 9 PRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEVNLPVEEVP 68
Query: 67 PELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKRLFSLIN 124
PELPEPALGINFARDGM KDW+SLVAVH+DSWLLSVAFY GAR +NERKRLF +IN
Sbjct: 69 PELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMIN 128
Query: 125 DQPTVFEVVT-ERKPIKDKPSVDSSSKSRGS 154
+ PT+FEVV+ K KD +++SKS+ S
Sbjct: 129 ELPTIFEVVSGNAKQSKDLSVNNNNSKSKPS 159
>sp|Q8LA16|ALFL7_ARATH PHD finger protein ALFIN-LIKE 7 OS=Arabidopsis thaliana GN=AL7 PE=1
SV=1
Length = 252
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 111/130 (85%), Gaps = 2/130 (1%)
Query: 7 PRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEVP 66
PRTVEE++ DF RRAG+++AL+ DV +FY CDP+KENLCLYG PNE+WEV LP EEVP
Sbjct: 9 PRTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVP 68
Query: 67 PELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKRLFSLIN 124
PELPEPALGINFARDGM KDW+SLVAVH+DSWL+SVAFY GAR +NERKRLF +IN
Sbjct: 69 PELPEPALGINFARDGMQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMIN 128
Query: 125 DQPTVFEVVT 134
D PT+FEVVT
Sbjct: 129 DLPTIFEVVT 138
>sp|Q40359|ALFIN_MEDSA PHD finger protein Alfin1 OS=Medicago sativa GN=ALFIN-1 PE=1 SV=1
Length = 257
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/156 (66%), Positives = 123/156 (78%), Gaps = 6/156 (3%)
Query: 7 PRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEVP 66
PRTVEE++ D+ RRAG+++ALT DV++FY L DP+KENLCLYG PNE+WEV LP EEVP
Sbjct: 10 PRTVEEVFSDYKGRRAGLIKALTTDVEKFYQLVDPEKENLCLYGFPNETWEVNLPVEEVP 69
Query: 67 PELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKRLFSLIN 124
PELPEPALGINFARDGM KDWLSLVAVH+DSWLL+VAFY GAR +N+RKRLF +IN
Sbjct: 70 PELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNDRKRLFQMIN 129
Query: 125 DQPTVFEVVT-ERKPIKDKPSV---DSSSKSRGSTK 156
D PTVFE+ T K KD+ + S+SK + S K
Sbjct: 130 DLPTVFELATGTAKQSKDQLTAHNNGSNSKYKSSGK 165
>sp|Q60DW3|ALFL5_ORYSJ PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. japonica
GN=Os05g0419100 PE=2 SV=1
Length = 258
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/156 (62%), Positives = 129/156 (82%), Gaps = 4/156 (2%)
Query: 6 SPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEV 65
+ RT EE+++DF RRAG+++ALT DV++FY LCDP+KENLCLYG+PNE+WEVTLPAEEV
Sbjct: 10 TSRTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEV 69
Query: 66 PPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKRLFSLI 123
PPE+PEPALGINFARDGMN KDWL+LVAVH+DSWLL+VAFY AR ++ R+RLF++I
Sbjct: 70 PPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMI 129
Query: 124 NDQPTVFEVVT--ERKPIKDKPSVDSSSKSRGSTKV 157
N+ PT+FEVVT +K K+K ++ ++ S+K+
Sbjct: 130 NNLPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKM 165
>sp|A2Y4R8|ALFL5_ORYSI PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. indica
GN=OsI_19996 PE=3 SV=1
Length = 258
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/156 (62%), Positives = 129/156 (82%), Gaps = 4/156 (2%)
Query: 6 SPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEV 65
+ RT EE+++DF RRAG+++ALT DV++FY LCDP+KENLCLYG+PNE+WEVTLPAEEV
Sbjct: 10 TSRTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEEV 69
Query: 66 PPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKRLFSLI 123
PPE+PEPALGINFARDGMN KDWL+LVAVH+DSWLL+VAFY AR ++ R+RLF++I
Sbjct: 70 PPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMI 129
Query: 124 NDQPTVFEVVT--ERKPIKDKPSVDSSSKSRGSTKV 157
N+ PT+FEVVT +K K+K ++ ++ S+K+
Sbjct: 130 NNLPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKM 165
>sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana GN=AL5 PE=2
SV=1
Length = 260
Score = 179 bits (454), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/154 (63%), Positives = 125/154 (81%), Gaps = 4/154 (2%)
Query: 6 SPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEV 65
SPRTVEE+++DF RRAG+++ALT DV++F+ CDP+K+NLCLYG PNE WEV LPAEEV
Sbjct: 9 SPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWEVNLPAEEV 68
Query: 66 PPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKRLFSLI 123
PPELPEPALGINFARDGM ++WLSLVAVH+D+WLLSV+FY G+R +R +RKRLFS+I
Sbjct: 69 PPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRADRKRLFSMI 128
Query: 124 NDQPTVFEVVT--ERKPIKDKPSVDSSSKSRGST 155
N+ PTV+EVVT K K+ PS + + +R +
Sbjct: 129 NEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKS 162
>sp|Q2R837|ALFL8_ORYSJ PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica
GN=Os11g0244800 PE=2 SV=1
Length = 254
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/160 (62%), Positives = 127/160 (79%), Gaps = 4/160 (2%)
Query: 1 MEMASSPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTL 60
M+ + RT E++++DF ARRAG+++ALT DV++FY CDP+KENLCLYG PNE+WEV L
Sbjct: 1 MDGGGAHRTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNL 60
Query: 61 PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKR 118
PAEEVPPELPEPALGINFARDGM+ KDWLSLVAVH+D+WLL+VAFY GAR ++ RKR
Sbjct: 61 PAEEVPPELPEPALGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKR 120
Query: 119 LFSLINDQPTVFEVV--TERKPIKDKPSVDSSSKSRGSTK 156
LFS+IN+ PT++EVV T +K K+K S ++ TK
Sbjct: 121 LFSMINNLPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTK 160
>sp|B8BJV8|ALFL8_ORYSI PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica
GN=OsI_35671 PE=3 SV=1
Length = 254
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/160 (62%), Positives = 127/160 (79%), Gaps = 4/160 (2%)
Query: 1 MEMASSPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTL 60
M+ + RT E++++DF ARRAG+++ALT DV++FY CDP+KENLCLYG PNE+WEV L
Sbjct: 1 MDGGGAHRTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNL 60
Query: 61 PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKR 118
PAEEVPPELPEPALGINFARDGM+ KDWLSLVAVH+D+WLL+VAFY GAR ++ RKR
Sbjct: 61 PAEEVPPELPEPALGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKR 120
Query: 119 LFSLINDQPTVFEVV--TERKPIKDKPSVDSSSKSRGSTK 156
LFS+IN+ PT++EVV T +K K+K S ++ TK
Sbjct: 121 LFSMINNLPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTK 160
>sp|Q6Z7F4|ALFL7_ORYSJ PHD finger protein ALFIN-LIKE 7 OS=Oryza sativa subsp. japonica
GN=Os02g0564100 PE=2 SV=1
Length = 267
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 113/129 (87%), Gaps = 2/129 (1%)
Query: 8 RTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEVPP 67
R+ E++++DF ARRAG+V+ALT DV++FY CDP+KENLCLYG PNE+W+VTLPAEEVPP
Sbjct: 27 RSAEDVFRDFRARRAGIVKALTTDVEKFYRQCDPEKENLCLYGLPNETWDVTLPAEEVPP 86
Query: 68 ELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKRLFSLIND 125
ELPEPALGINFARDGM KDWLSLVAVH+D+WLLSVAFY GAR ++ R+RLF++IN
Sbjct: 87 ELPEPALGINFARDGMIEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKEARRRLFTMING 146
Query: 126 QPTVFEVVT 134
PTV+EVVT
Sbjct: 147 LPTVYEVVT 155
>sp|B8ADZ3|ALFL7_ORYSI PHD finger protein ALFIN-LIKE 7 OS=Oryza sativa subsp. indica
GN=OsI_07694 PE=3 SV=1
Length = 267
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 113/129 (87%), Gaps = 2/129 (1%)
Query: 8 RTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEEVPP 67
R+ E++++DF ARRAG+V+ALT DV++FY CDP+KENLCLYG PNE+W+VTLPAEEVPP
Sbjct: 27 RSAEDVFRDFRARRAGIVKALTTDVEKFYRQCDPEKENLCLYGLPNETWDVTLPAEEVPP 86
Query: 68 ELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGAR--LNRNERKRLFSLIND 125
ELPEPALGINFARDGM KDWLSLVAVH+D+WLLSVAFY GAR ++ R+RLF++IN
Sbjct: 87 ELPEPALGINFARDGMIEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKEARRRLFTMING 146
Query: 126 QPTVFEVVT 134
PTV+EVVT
Sbjct: 147 LPTVYEVVT 155
>sp|O81488|ALFL4_ARATH PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana GN=AL4 PE=1
SV=2
Length = 255
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 115/142 (80%), Gaps = 4/142 (2%)
Query: 4 ASSPRTVEEIYKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAE 63
A +PRTVEE+++DF RRAG+++ALT DV EF+ LCDP+KENLCLYGHPNE WEV LPAE
Sbjct: 6 AYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNLPAE 65
Query: 64 EVPPELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSV--AFYLGARLNRNERKRLFS 121
EVPPELPEP LGINFARDGM KDWLSLVAVH+D+WLL+V F ++ +RKRLF+
Sbjct: 66 EVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADRKRLFN 125
Query: 122 LINDQPTVFEVV--TERKPIKD 141
++ND PT+FEVV T +K KD
Sbjct: 126 MVNDLPTIFEVVAGTAKKQGKD 147
>sp|A8ETQ3|DNLJ_ARCB4 DNA ligase OS=Arcobacter butzleri (strain RM4018) GN=ligA PE=3 SV=1
Length = 648
Score = 36.6 bits (83), Expect = 0.063, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 68 ELPEPALGINFARDGMNRKDWLSLVAVHTDSWLLSVAFYLGARLNRNERKRLFSLINDQP 127
E+ + + F D +N KD+ SL+A+ ++ +F R+N+N ++L S+IN +
Sbjct: 509 EVASKQICLEFGLDVIN-KDYDSLIALDGFGEQMANSFIEFMRVNKNLVEKLISIINPKV 567
Query: 128 TVFEVVTERKPIKDKPSV--DSSSKSRGSTK 156
+ + V+E P K+K V + SKSRG K
Sbjct: 568 EIKKEVSE-NPFKNKTVVITGTMSKSRGEIK 597
>sp|Q9W420|SPT6H_DROME Transcription elongation factor SPT6 OS=Drosophila melanogaster
GN=Spt6 PE=1 SV=1
Length = 1831
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 14 YKDFCARRAGVVRALTNDVDEFYGLCDPDKENLCLYGHP 52
Y + A + R + + + E+ LCD D E LCL HP
Sbjct: 910 YPPLLKQAASLARKMQDPLVEYSQLCDADDEILCLRYHP 948
>sp|P0A620|TOP1_MYCTU DNA topoisomerase 1 OS=Mycobacterium tuberculosis GN=topA PE=1 SV=1
Length = 934
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 25 VRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEE-VPPELPEPAL 74
+R L DVDE Y D D+E + H E+ + +P + V E+ EPA+
Sbjct: 96 LRGLLKDVDELYLATDGDREGEAIAWHLLETLKPRIPVKRMVFHEITEPAI 146
>sp|P0A621|TOP1_MYCBO DNA topoisomerase 1 OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=topA PE=3 SV=1
Length = 934
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 25 VRALTNDVDEFYGLCDPDKENLCLYGHPNESWEVTLPAEE-VPPELPEPAL 74
+R L DVDE Y D D+E + H E+ + +P + V E+ EPA+
Sbjct: 96 LRGLLKDVDELYLATDGDREGEAIAWHLLETLKPRIPVKRMVFHEITEPAI 146
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 28 LTNDVDEFYGLCDPDKENLCLYGHP---NESWEVTLPAEEVPPELPEPA 73
+T +++EFY LCD + L P + W V EVP P+PA
Sbjct: 282 ITKEIEEFYSLCD----EMDLQALPLPLEDGWTVDASNFEVPCSSPQPA 326
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,960,581
Number of Sequences: 539616
Number of extensions: 2726843
Number of successful extensions: 5658
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 5609
Number of HSP's gapped (non-prelim): 37
length of query: 157
length of database: 191,569,459
effective HSP length: 108
effective length of query: 49
effective length of database: 133,290,931
effective search space: 6531255619
effective search space used: 6531255619
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)