Query 031559
Match_columns 157
No_of_seqs 90 out of 119
Neff 2.5
Searched_HMMs 13730
Date Tue Mar 26 01:39:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031559.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031559hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2diqa1 b.34.9.1 (A:8-104) Tud 49.6 6.4 0.00047 24.5 3.0 34 24-57 4-43 (97)
2 d1otfa_ d.80.1.1 (A:) 4-oxaloc 41.2 11 0.00077 22.3 2.9 38 20-58 15-52 (59)
3 d1mnma_ d.88.1.1 (A:) MCM1 tra 41.0 4.3 0.00031 27.1 1.1 24 16-43 21-44 (85)
4 d1md8a2 g.18.1.1 (A:358-433) C 39.8 6.5 0.00048 24.2 1.8 30 38-67 31-72 (76)
5 d1qjta_ a.39.1.6 (A:) Eps15 {M 36.4 8.6 0.00062 24.6 2.0 38 31-75 46-98 (99)
6 d1elva2 g.18.1.1 (A:342-409) C 36.2 8.2 0.0006 23.0 1.8 30 38-67 29-64 (68)
7 d1lrza3 d.108.1.4 (A:166-244,A 29.7 24 0.0018 23.5 3.6 44 8-51 1-55 (182)
8 d1qgja_ a.93.1.1 (A:) Plant pe 29.1 6.3 0.00046 30.5 0.4 31 66-96 131-166 (300)
9 d1gyxa_ d.80.1.1 (A:) 4-oxaloc 26.9 11 0.00078 24.2 1.2 36 21-57 17-52 (76)
10 d2v3za1 c.55.2.1 (A:1-176) Ami 26.1 14 0.00099 25.2 1.7 16 15-30 6-21 (176)
11 d1bgpa_ a.93.1.1 (A:) Plant pe 24.4 9.7 0.00071 29.3 0.7 34 63-96 142-180 (309)
12 d1egwa_ d.88.1.1 (A:) Myocyte 23.0 16 0.0012 23.3 1.4 24 16-43 19-42 (71)
13 d1g40a4 g.18.1.1 (A:185-243) C 22.6 16 0.0012 21.1 1.3 21 38-61 30-56 (59)
14 d1q3xa2 g.18.1.1 (A:366-440) M 22.1 28 0.002 21.0 2.5 31 38-68 30-65 (75)
15 d1s0ya_ d.80.1.1 (A:) Trans-3- 21.8 34 0.0025 20.1 2.8 38 20-58 15-52 (62)
16 d1quba3 g.18.1.1 (A:121-183) b 21.4 14 0.00099 21.4 0.8 23 38-61 34-59 (63)
No 1
>d2diqa1 b.34.9.1 (A:8-104) Tudor and KH domain-containing protein TDRKH {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.55 E-value=6.4 Score=24.50 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=25.5
Q ss_pred HHHHhhhcHHHhhhcCCC-----CCCcceeccCC-CCcee
Q 031559 24 VVRALTNDVDEFYGLCDP-----DKENLCLYGHP-NESWE 57 (157)
Q Consensus 24 lirALT~Dve~Fy~~CDP-----~kenLcLYG~p-~~~We 57 (157)
=+..|++++.+||++..+ ....+|+.-++ ||.|-
T Consensus 4 ~l~~L~~~l~~~y~~~~~~~~~~~~G~~~~a~~~~d~~wy 43 (97)
T d2diqa1 4 QLDKLVNEMTQHYENSVPEDLTVHVGDIVAAPLPTNGSWY 43 (97)
T ss_dssp HHHHHHHHHHHHHTTSCCCCCCCCTTCEEEECCTTTCSCE
T ss_pred HHHHHHHHHHHHHccCCCCcCCCCCCCEEEEEECCCCeEE
Confidence 367899999999987544 33578887765 78884
No 2
>d1otfa_ d.80.1.1 (A:) 4-oxalocrotonate tautomerase {Pseudomonas sp., DmpI [TaxId: 306]}
Probab=41.23 E-value=11 Score=22.26 Aligned_cols=38 Identities=5% Similarity=0.276 Sum_probs=31.1
Q ss_pred hHHHHHHHhhhcHHHhhhcCCCCCCcceeccCCCCceee
Q 031559 20 RRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEV 58 (157)
Q Consensus 20 RR~glirALT~Dve~Fy~~CDP~kenLcLYG~p~~~WeV 58 (157)
.++.|++++|.-+.+... |+|+.=..-+.=.|.+.|-+
T Consensus 15 qK~~l~~~it~~~~~~~g-~~~~~v~V~i~E~~~~nw~~ 52 (59)
T d1otfa_ 15 QKETLIRQVSEAMANSLD-APLERVRVLITEMPKNHFGI 52 (59)
T ss_dssp HHHHHHHHHHHHHHHHHT-CCGGGCEEEEEEECGGGEEE
T ss_pred HHHHHHHHHHHHHHHHhC-cCcccEEEEEEEeChhhEEE
Confidence 478899999998888777 88888777777778887765
No 3
>d1mnma_ d.88.1.1 (A:) MCM1 transcriptional regulator {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.96 E-value=4.3 Score=27.11 Aligned_cols=24 Identities=21% Similarity=0.360 Sum_probs=17.8
Q ss_pred HHhhhHHHHHHHhhhcHHHhhhcCCCCC
Q 031559 16 DFCARRAGVVRALTNDVDEFYGLCDPDK 43 (157)
Q Consensus 16 Df~~RR~glirALT~Dve~Fy~~CDP~k 43 (157)
-|+.||.||+|= +.++.-+||-+-
T Consensus 21 TFsKRr~GL~KK----a~ELsvLc~a~v 44 (85)
T d1mnma_ 21 TFSKRKHGIMKK----AFELSVLTGTQV 44 (85)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHTCEE
T ss_pred hhHHHHhhHHHH----HHHHhccCCCcE
Confidence 489999999874 456777787643
No 4
>d1md8a2 g.18.1.1 (A:358-433) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.84 E-value=6.5 Score=24.23 Aligned_cols=30 Identities=13% Similarity=0.306 Sum_probs=20.5
Q ss_pred cCCCCCCcc------eeccC------CCCceeeeCCCCCCCC
Q 031559 38 LCDPDKENL------CLYGH------PNESWEVTLPAEEVPP 67 (157)
Q Consensus 38 ~CDP~kenL------cLYG~------p~~~WeV~lPaeevPp 67 (157)
+|++++..+ +|=|. .||+|.=..|.-++|.
T Consensus 31 ~C~~GY~~~~~~~~~~l~G~~~~tC~~~G~Ws~~~p~C~~~~ 72 (76)
T d1md8a2 31 YCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPR 72 (76)
T ss_dssp EECTTTEEECC--------CCEEEECTTSSEECSSCCSSCCC
T ss_pred EecCCccccccccceeecccceeeecCCCcCCCCCCCccCCC
Confidence 699998432 44444 8999999988888774
No 5
>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.37 E-value=8.6 Score=24.64 Aligned_cols=38 Identities=16% Similarity=0.330 Sum_probs=27.8
Q ss_pred cHHHhhhcCCCCCCc---------------ceeccCCCCceeeeCCCCCCCCCCCCCccC
Q 031559 31 DVDEFYGLCDPDKEN---------------LCLYGHPNESWEVTLPAEEVPPELPEPALG 75 (157)
Q Consensus 31 Dve~Fy~~CDP~ken---------------LcLYG~p~~~WeV~lPaeevPpeLPEPalG 75 (157)
++++.|+.||.+... +|..|. .+|.+-+|..+|.|..|
T Consensus 46 ~L~~i~~~~D~d~dG~L~~~EF~~am~Li~~~q~g~-------~l~~~~l~~~~p~P~~~ 98 (99)
T d1qjta_ 46 ILGKIWDLADTDGKGVLSKQEFFVALRLVACAQNGL-------EVSLSSLSLAVPPPRFH 98 (99)
T ss_dssp HHHHHHHHHCCSSSSSCCSHHHHHHHHHHHHHTTTC-------CSSGGGCSSCCCCCSSC
T ss_pred HHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHHcCC-------CCCccccccCCCCCCCC
Confidence 678999999998863 123443 47778888888989776
No 6
>d1elva2 g.18.1.1 (A:342-409) Complement C1S protease domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.21 E-value=8.2 Score=23.03 Aligned_cols=30 Identities=23% Similarity=0.330 Sum_probs=21.4
Q ss_pred cCCCCCCcceecc------CCCCceeeeCCCCCCCC
Q 031559 38 LCDPDKENLCLYG------HPNESWEVTLPAEEVPP 67 (157)
Q Consensus 38 ~CDP~kenLcLYG------~p~~~WeV~lPaeevPp 67 (157)
+||.++..+-+-| .+||+|.=..|.-++|.
T Consensus 29 ~C~~Gy~~~~~~g~~~~~C~~dG~Ws~~~~~c~~p~ 64 (68)
T d1elva2 29 TCEEPYYYMENGGGGEYHCAGNGSWVNEVLGPELPK 64 (68)
T ss_dssp EECTTTEEEC--CCSEEEECTTSCEEBTTTBTSCCC
T ss_pred EecCCceEEEecCccEEEECCCCcCcCCCCCCcCCC
Confidence 6999885444444 47999999988888764
No 7
>d1lrza3 d.108.1.4 (A:166-244,A:310-412) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]}
Probab=29.72 E-value=24 Score=23.45 Aligned_cols=44 Identities=14% Similarity=0.265 Sum_probs=23.8
Q ss_pred CCHHHHHHHHhhh-HHHHHHHhhh----------cHHHhhhcCCCCCCcceeccC
Q 031559 8 RTVEEIYKDFCAR-RAGVVRALTN----------DVDEFYGLCDPDKENLCLYGH 51 (157)
Q Consensus 8 rTvE~iF~Df~~R-R~glirALT~----------Dve~Fy~~CDP~kenLcLYG~ 51 (157)
+|.|||++.|+.+ |..|=||+-. |+++||+.-.--.+....+.+
T Consensus 1 ks~del~~~~~~~~Rr~Irka~k~gv~i~~~~~~~l~~f~~l~~~~~~r~g~~~~ 55 (182)
T d1lrza3 1 KTADDIIKNMDGLRKRNTKKVKKNGVKVRFLSEEELPIFRSFMEDTSESKAFADR 55 (182)
T ss_dssp CCHHHHHHTSCHHHHHHHHHHHTSSCEEEECCGGGHHHHHHHC------------
T ss_pred CCHHHHHHhcCHHHHHHHHHHHHCCCEEEEcCHHHHHHHHHHHHHHHHhcCCCCC
Confidence 5889999999754 5667677764 677777766544444433333
No 8
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]}
Probab=29.10 E-value=6.3 Score=30.54 Aligned_cols=31 Identities=29% Similarity=0.453 Sum_probs=26.7
Q ss_pred CCCCCCCccCc-----cccCCCccccchhhhhhhcc
Q 031559 66 PPELPEPALGI-----NFARDGMNRKDWLSLVAVHT 96 (157)
Q Consensus 66 PpeLPEPalGI-----NfaRDgM~rkdWLslVAvHS 96 (157)
+..+|.|..+| +|+|-||..+|...|..-|+
T Consensus 131 ~~~lP~p~~~~~~l~~~F~~~Gl~~~d~VaLsGAHT 166 (300)
T d1qgja_ 131 ANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHT 166 (300)
T ss_dssp HTTSCCTTSCHHHHHHHHHTTTCCHHHHHHHHGGGG
T ss_pred ccCCCCCCCCHHHHHHHHHHcCCchhhhhhhccccc
Confidence 34688888776 59999999999999999987
No 9
>d1gyxa_ d.80.1.1 (A:) 4-oxalocrotonate tautomerase homologue YdcE {Escherichia coli [TaxId: 562]}
Probab=26.92 E-value=11 Score=24.18 Aligned_cols=36 Identities=17% Similarity=0.306 Sum_probs=32.0
Q ss_pred HHHHHHHhhhcHHHhhhcCCCCCCcceeccCCCCcee
Q 031559 21 RAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWE 57 (157)
Q Consensus 21 R~glirALT~Dve~Fy~~CDP~kenLcLYG~p~~~We 57 (157)
.+.|++++|.-+-+-+. |+|+.-..-+.=.|.+.|+
T Consensus 17 K~~L~~~iT~a~~~~lg-~~~e~V~V~i~Ev~~enW~ 52 (76)
T d1gyxa_ 17 KAALAADITDVIIRHLN-SKDSSISIALQQIQPESWQ 52 (76)
T ss_dssp HHHHHHHHHHHHHHHHT-CCGGGCEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHHhC-cCCCeEEEEEEECCHHhhh
Confidence 68899999998888887 9999988999999999994
No 10
>d2v3za1 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia coli [TaxId: 562]}
Probab=26.12 E-value=14 Score=25.24 Aligned_cols=16 Identities=25% Similarity=0.526 Sum_probs=13.7
Q ss_pred HHHhhhHHHHHHHhhh
Q 031559 15 KDFCARRAGVVRALTN 30 (157)
Q Consensus 15 ~Df~~RR~glirALT~ 30 (157)
++|+.||+.|++.|-.
T Consensus 6 ~ey~~RR~~l~~~l~~ 21 (176)
T d2v3za1 6 QEFQRRRQALVEQMQP 21 (176)
T ss_dssp HHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHhCCC
Confidence 4699999999999854
No 11
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]}
Probab=24.43 E-value=9.7 Score=29.35 Aligned_cols=34 Identities=26% Similarity=0.546 Sum_probs=29.6
Q ss_pred CCCCCCCCCCccCc-----cccCCCccccchhhhhhhcc
Q 031559 63 EEVPPELPEPALGI-----NFARDGMNRKDWLSLVAVHT 96 (157)
Q Consensus 63 eevPpeLPEPalGI-----NfaRDgM~rkdWLslVAvHS 96 (157)
+.++..||+|..++ .|+|-||..+|...|.+-|+
T Consensus 142 ~~~~~~lP~p~~~~~~l~~~F~~~G~~~~e~VALsGAHT 180 (309)
T d1bgpa_ 142 QDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHT 180 (309)
T ss_dssp HHHHHHSCCTTCCHHHHHHHHHHTTCCHHHHHHHGGGGG
T ss_pred ccccccCCCCcCCHHHHHHHHHHcCCChhhheeeeeecc
Confidence 44566799999998 59999999999999999886
No 12
>d1egwa_ d.88.1.1 (A:) Myocyte enhancer factor Mef2a core {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.02 E-value=16 Score=23.30 Aligned_cols=24 Identities=29% Similarity=0.541 Sum_probs=18.2
Q ss_pred HHhhhHHHHHHHhhhcHHHhhhcCCCCC
Q 031559 16 DFCARRAGVVRALTNDVDEFYGLCDPDK 43 (157)
Q Consensus 16 Df~~RR~glirALT~Dve~Fy~~CDP~k 43 (157)
-|+.||.||+|- +.|+--+||-+-
T Consensus 19 TFsKRk~GL~KK----a~ELs~LC~~~v 42 (71)
T d1egwa_ 19 TFTKRKFGLMKK----AYELSVLCDCEI 42 (71)
T ss_dssp HHHHHHHHHHHH----HHHHHHHTTCEE
T ss_pred ehhHhhhhHHHH----HHHHhhccCCcE
Confidence 489999999875 455777887654
No 13
>d1g40a4 g.18.1.1 (A:185-243) Complement control protein {Vaccinia virus [TaxId: 10245]}
Probab=22.63 E-value=16 Score=21.05 Aligned_cols=21 Identities=33% Similarity=0.793 Sum_probs=14.5
Q ss_pred cCCCCCCcceecc------CCCCceeeeCC
Q 031559 38 LCDPDKENLCLYG------HPNESWEVTLP 61 (157)
Q Consensus 38 ~CDP~kenLcLYG------~p~~~WeV~lP 61 (157)
.|++++. |-| .+||+|.-.+|
T Consensus 30 ~C~~Gy~---l~G~~~~~C~~~G~Ws~~~P 56 (59)
T d1g40a4 30 KCKYGYK---LSGSSSSTCSPGNTWKPELP 56 (59)
T ss_dssp EECTTCC---EESCSSCCEETTTEESSCCC
T ss_pred EcCCCCE---EcCCCceEECCCCEECCCCc
Confidence 5888875 333 38999986554
No 14
>d1q3xa2 g.18.1.1 (A:366-440) Mannan-binding lectin serine protease 2 (MASP-2) domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.11 E-value=28 Score=20.97 Aligned_cols=31 Identities=10% Similarity=0.149 Sum_probs=21.2
Q ss_pred cCCCCCC-----cceeccCCCCceeeeCCCCCCCCC
Q 031559 38 LCDPDKE-----NLCLYGHPNESWEVTLPAEEVPPE 68 (157)
Q Consensus 38 ~CDP~ke-----nLcLYG~p~~~WeV~lPaeevPpe 68 (157)
+|+++++ +--+.=..||+|.-..|..++|.=
T Consensus 30 ~C~~Gy~~~l~G~~~~~C~~~G~Ws~~~~~c~~p~C 65 (75)
T d1q3xa2 30 SCEETFYTMKVNDGKYVCEADGFWTSSKGEKSLPVC 65 (75)
T ss_dssp EECTTTEEEESCCSEEEECTTSCEEETTCCSSCCEE
T ss_pred eecCCceeeccCCceEEECCCCcCCCCCCCCcCCee
Confidence 5998874 222334689999988777776643
No 15
>d1s0ya_ d.80.1.1 (A:) Trans-3-chloroacrylic acid dehalogenase alpha-subunit, CaaD1 {Pseudomonas pavonaceae [TaxId: 47881]}
Probab=21.78 E-value=34 Score=20.08 Aligned_cols=38 Identities=8% Similarity=0.065 Sum_probs=26.1
Q ss_pred hHHHHHHHhhhcHHHhhhcCCCCCCcceeccCCCCceee
Q 031559 20 RRAGVVRALTNDVDEFYGLCDPDKENLCLYGHPNESWEV 58 (157)
Q Consensus 20 RR~glirALT~Dve~Fy~~CDP~kenLcLYG~p~~~WeV 58 (157)
.+..|+++||+-+.+... |+++.-..-+.=+|-+.|-+
T Consensus 15 qK~~l~~~it~~~~~~~g-~~~e~v~V~i~E~~~~nw~~ 52 (62)
T d1s0ya_ 15 QKRALSAGLLRVISEATG-EPRENIFFVIREGSGINFVE 52 (62)
T ss_dssp HHHHHHHHHHHHHHHHHC-CCGGGCEEEEEEECGGGEEE
T ss_pred HHHHHHHHHHHHHHHHhC-cCcccEEEEEEEeChHHeEE
Confidence 478899999998888877 77766544554445444443
No 16
>d1quba3 g.18.1.1 (A:121-183) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.40 E-value=14 Score=21.44 Aligned_cols=23 Identities=22% Similarity=0.478 Sum_probs=13.7
Q ss_pred cCCCCCCc---ceeccCCCCceeeeCC
Q 031559 38 LCDPDKEN---LCLYGHPNESWEVTLP 61 (157)
Q Consensus 38 ~CDP~ken---LcLYG~p~~~WeV~lP 61 (157)
+|++++.- --+.=..||+|. .+|
T Consensus 34 ~C~~Gy~l~G~~~~~C~~~G~Ws-~~P 59 (63)
T d1quba3 34 ECLPQHAMFGNDTITCTTHGNWT-KLP 59 (63)
T ss_dssp EECTTEEEESCSEEEBCTTSSBS-CCC
T ss_pred EcCCCCEEcCCCeEEEecCCeEC-cCC
Confidence 68887741 113335899996 544
Done!