Query 031561
Match_columns 157
No_of_seqs 145 out of 1108
Neff 8.3
Searched_HMMs 29240
Date Tue Mar 26 01:42:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031561.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031561hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 4.3E-54 1.5E-58 310.6 19.8 149 2-154 3-151 (151)
2 2c2v_B Ubiquitin-conjugating e 100.0 6.1E-54 2.1E-58 310.7 15.9 149 3-155 5-153 (154)
3 2aak_A UBC1, ubiquitin conjuga 100.0 4E-53 1.4E-57 305.8 19.2 150 1-154 1-151 (152)
4 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.7E-53 5.7E-58 312.4 17.3 151 1-155 1-152 (169)
5 2bep_A Ubiquitin-conjugating e 100.0 4.5E-53 1.6E-57 307.6 19.1 151 1-154 5-159 (159)
6 2r0j_A Ubiquitin carrier prote 100.0 2.6E-53 9E-58 305.9 17.3 147 4-154 2-148 (149)
7 2ayv_A Ubiquitin-conjugating e 100.0 6.5E-53 2.2E-57 308.4 19.3 146 3-152 21-166 (166)
8 1z2u_A Ubiquitin-conjugating e 100.0 7.5E-53 2.6E-57 303.8 18.6 147 3-153 4-150 (150)
9 1zdn_A Ubiquitin-conjugating e 100.0 4.9E-53 1.7E-57 307.1 17.4 146 3-152 13-158 (158)
10 2c4o_A Ubiquitin-conjugating e 100.0 9.6E-53 3.3E-57 307.3 19.0 147 3-153 19-165 (165)
11 1fxt_A Ubiquitin-conjugating e 100.0 2.1E-53 7.3E-58 306.4 14.8 147 4-153 2-149 (149)
12 1jat_A Ubiquitin-conjugating e 100.0 3.5E-53 1.2E-57 307.0 15.8 150 2-155 4-153 (155)
13 1yh2_A HSPC150 protein similar 100.0 2.9E-52 9.9E-57 306.0 19.8 149 3-155 4-156 (169)
14 2f4z_A Tgtwinscan_2721 - E2 do 100.0 2.2E-52 7.6E-57 311.8 18.1 151 3-154 32-193 (193)
15 2ucz_A UBC7, ubiquitin conjuga 100.0 5.6E-52 1.9E-56 303.5 19.4 149 1-153 1-164 (165)
16 3bzh_A Ubiquitin-conjugating e 100.0 4.2E-52 1.4E-56 310.7 19.0 149 1-153 46-194 (194)
17 2pwq_A Ubiquitin conjugating e 100.0 1.8E-52 6E-57 317.1 17.1 151 2-155 22-172 (216)
18 3k9o_A Ubiquitin-conjugating e 100.0 3.9E-52 1.3E-56 313.0 18.7 154 1-155 2-157 (201)
19 3h8k_A Ubiquitin-conjugating e 100.0 9.8E-52 3.3E-56 302.0 19.5 148 2-153 2-163 (164)
20 2e2c_A Ubiquitin conjugating e 100.0 8.1E-52 2.8E-56 300.2 18.4 147 3-154 9-155 (156)
21 2gjd_A Ubiquitin-conjugating e 100.0 6.4E-52 2.2E-56 301.0 17.6 149 1-153 1-157 (157)
22 3rcz_B SUMO-conjugating enzyme 100.0 1E-51 3.4E-56 301.4 18.0 147 3-153 10-163 (163)
23 2grr_A Ubiquitin-conjugating e 100.0 2.4E-51 8.2E-56 299.0 17.7 150 1-154 4-161 (161)
24 1wzv_A Ubiquitin-conjugating e 100.0 3.8E-51 1.3E-55 296.4 16.7 148 3-155 4-153 (155)
25 1i7k_A Ubiquitin-conjugating e 100.0 4.8E-51 1.6E-55 301.5 17.4 149 3-156 30-178 (179)
26 3e46_A Ubiquitin-conjugating e 100.0 8.5E-51 2.9E-55 314.0 19.3 154 1-155 54-209 (253)
27 3fn1_B NEDD8-conjugating enzym 100.0 2.2E-50 7.4E-55 295.6 17.9 148 1-153 12-167 (167)
28 1tte_A Ubiquitin-conjugating e 100.0 2.9E-51 1E-55 310.2 12.9 151 2-155 1-152 (215)
29 1yrv_A Ubiquitin-conjugating l 100.0 2.5E-50 8.7E-55 295.4 16.2 146 1-150 20-168 (169)
30 2y9m_A Ubiquitin-conjugating e 100.0 1.8E-49 6.2E-54 291.8 19.9 153 1-154 3-169 (172)
31 2onu_A Ubiquitin-conjugating e 100.0 5.2E-51 1.8E-55 294.6 10.8 147 3-155 2-149 (152)
32 3rz3_A Ubiquitin-conjugating e 100.0 1.1E-49 3.9E-54 295.5 18.1 148 2-153 6-173 (183)
33 1y8x_A Ubiquitin-conjugating e 100.0 6.4E-49 2.2E-53 285.9 17.4 143 1-150 4-147 (160)
34 2z5d_A Ubiquitin-conjugating e 100.0 1.2E-49 4E-54 293.8 12.4 145 3-154 25-170 (179)
35 1c4z_D UBCH7, ubiquitin conjug 100.0 7.8E-50 2.7E-54 289.2 11.0 148 3-155 2-151 (154)
36 2awf_A Ubiquitin-conjugating e 100.0 5.5E-49 1.9E-53 289.2 15.4 141 3-147 17-172 (172)
37 4ddg_A Ubiquitin-conjugating e 100.0 4.7E-48 1.6E-52 316.6 19.0 150 2-155 2-151 (399)
38 1yf9_A Ubiquitin carrier prote 100.0 1E-48 3.5E-53 287.4 12.9 144 4-154 13-157 (171)
39 2nvu_C NEDD8-conjugating enzym 100.0 5.2E-48 1.8E-52 285.7 16.2 142 2-150 25-167 (180)
40 3o2u_A NEDD8-conjugating enzym 100.0 1.8E-47 6.2E-52 285.0 15.4 145 1-152 27-178 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 5.8E-45 2E-49 266.8 12.5 143 1-145 5-163 (167)
42 2fo3_A Ubiquitin-conjugating e 100.0 5.6E-44 1.9E-48 250.2 14.2 118 1-121 4-122 (125)
43 3ceg_A Baculoviral IAP repeat- 100.0 3.9E-43 1.3E-47 278.4 16.2 148 3-154 76-244 (323)
44 2q0v_A Ubiquitin-conjugating e 100.0 1.3E-43 4.3E-48 256.7 11.8 128 3-135 21-155 (156)
45 2a4d_A Ubiquitin-conjugating e 100.0 5.8E-43 2E-47 253.9 14.6 126 3-130 25-157 (160)
46 2h2y_A Ubiquitin-conjugating e 100.0 1.2E-42 4E-47 246.6 15.7 117 1-120 18-135 (136)
47 1jat_B Ubiquitin-conjugating e 100.0 9.5E-44 3.3E-48 252.9 8.7 129 1-132 2-138 (138)
48 2hlw_A Ubiquitin-conjugating e 100.0 3.1E-42 1.1E-46 252.5 11.3 125 3-129 35-166 (170)
49 2a7l_A Hypothetical ubiquitin- 100.0 9.6E-42 3.3E-46 241.7 12.1 113 1-116 20-136 (136)
50 2f4w_A Ubiquitin-conjugating e 100.0 1.4E-38 4.7E-43 236.5 15.3 116 3-123 14-132 (187)
51 1zuo_A Hypothetical protein LO 100.0 6.4E-40 2.2E-44 243.4 5.7 142 1-152 24-181 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 1.1E-28 3.8E-33 177.1 1.6 111 5-132 34-159 (172)
53 3r3q_A Suppressor protein STP2 99.8 7.1E-21 2.4E-25 137.6 9.6 115 6-122 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.7 2.1E-19 7E-24 126.4 1.3 92 5-108 36-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 5.5E-15 1.9E-19 105.0 7.3 102 7-118 24-139 (146)
56 2ebm_A RWD domain-containing p 97.1 0.0043 1.5E-07 42.2 9.0 69 3-75 10-78 (128)
57 3zqs_A E3 ubiquitin-protein li 96.6 0.024 8.2E-07 41.3 10.1 85 7-118 5-89 (186)
58 2yz0_A Serine/threonine-protei 96.4 0.027 9.2E-07 38.7 8.7 67 6-75 13-85 (138)
59 2day_A Ring finger protein 25; 96.4 0.049 1.7E-06 36.8 9.9 68 6-75 11-82 (128)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 95.3 0.14 4.9E-06 34.8 8.8 68 5-75 12-86 (137)
61 2ebk_A RWD domain-containing p 94.8 0.062 2.1E-06 36.3 5.6 67 7-74 11-78 (128)
62 2daw_A RWD domain containing p 93.8 0.23 7.9E-06 34.7 7.0 67 5-75 16-98 (154)
63 2dax_A Protein C21ORF6; RWD do 92.7 0.52 1.8E-05 32.7 7.3 23 53-75 74-96 (152)
64 2cwb_A Chimera of immunoglobul 84.0 0.2 6.9E-06 33.2 0.0 35 119-154 22-56 (108)
65 3u3c_B Paxillin LD2 peptide; 4 65.9 4.2 0.00014 19.0 1.8 20 4-25 6-25 (26)
66 2bum_A Protocatechuate 3,4-dio 46.4 20 0.00067 26.2 3.6 26 50-75 109-139 (209)
67 3g9r_A Fusion complex of HIV-1 38.7 15 0.00052 19.4 1.5 16 1-16 26-41 (42)
68 3t63_A 3,4-PCD, protocatechuat 28.5 37 0.0013 24.6 2.6 24 52-75 102-130 (200)
69 1h3o_B Transcription initiatio 27.6 54 0.0018 19.9 2.9 42 111-153 11-52 (76)
70 3t63_M 3,4-PCD, protocatechuat 27.5 33 0.0011 25.6 2.3 25 51-75 134-165 (238)
71 2fkn_A Urocanate hydratase; ro 27.2 1.1E+02 0.0036 25.7 5.3 26 126-152 278-303 (552)
72 2bum_B Protocatechuate 3,4-dio 26.8 35 0.0012 25.5 2.3 26 50-75 134-166 (241)
73 1x87_A Urocanase protein; stru 26.7 1.1E+02 0.0037 25.6 5.3 26 126-152 277-302 (551)
74 3rls_A YAF9, protein AF-9 homo 26.6 1.7E+02 0.0058 20.7 5.9 42 32-75 30-71 (175)
75 1uwk_A Urocanate hydratase; hy 26.4 1.1E+02 0.0038 25.5 5.3 51 78-152 256-307 (557)
76 2xsu_A Catechol 1,2 dioxygenas 26.2 36 0.0012 26.5 2.3 25 51-75 188-230 (312)
77 2azq_A Catechol 1,2-dioxygenas 25.8 37 0.0013 26.4 2.3 24 51-74 184-225 (311)
78 1tmx_A Hydroxyquinol 1,2-dioxy 25.0 39 0.0013 26.0 2.3 26 50-75 183-226 (293)
79 3n9t_A PNPC; phospholipid bind 24.3 41 0.0014 25.9 2.3 24 51-74 181-222 (290)
80 3zqs_A E3 ubiquitin-protein li 24.2 96 0.0033 22.2 4.1 56 51-112 123-180 (186)
81 1m46_B IQ4, IQ4 motif from MYO 23.6 65 0.0022 14.9 2.1 12 5-16 10-21 (26)
82 2boy_A 3-chlorocatechol 1,2-di 23.5 44 0.0015 25.1 2.3 25 51-75 154-196 (254)
83 1dmh_A 1,2-CTD, catechol 1,2-d 22.4 46 0.0016 25.9 2.3 24 51-74 187-228 (311)
84 3hhy_A 1,2-CTD, catechol 1,2-d 22.4 44 0.0015 25.6 2.1 24 51-74 183-224 (280)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=4.3e-54 Score=310.57 Aligned_cols=149 Identities=41% Similarity=0.796 Sum_probs=145.6
Q ss_pred chHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCc
Q 031561 2 QASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (157)
Q Consensus 2 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 81 (157)
+.|.+||++|++++++++ ++|+++.+.++|+++|+++|.||++|+|+||.|++.|.||++||++||+|+|.|+|||||
T Consensus 3 ~~a~~RL~kEl~~l~~~~--~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 80 (151)
T 4gpr_A 3 AMAMRRIQKELREIQQDP--PCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPN 80 (151)
T ss_dssp HHHHHHHHHHHHHHHHSC--CTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred hHHHHHHHHHHHHHHhCC--CCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccce
Confidence 468999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCC
Q 031561 82 VHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMP 154 (157)
Q Consensus 82 i~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~ 154 (157)
|+ .+|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++| .+|+++|.++||+|+++||++
T Consensus 81 v~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~-~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 81 IN-KNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVL-RANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp BC-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHH-HHCHHHHHHHHHHHHHHHCCC
T ss_pred EC-CCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHH-HHCHHHHHHHHHHHHHHhcCC
Confidence 99 799999999999999999999999999999999999999999999999 889999999999999999985
No 2
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.1e-54 Score=310.69 Aligned_cols=149 Identities=42% Similarity=0.746 Sum_probs=142.7
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCcc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 82 (157)
.+.+||++|++++++++ ++|+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 5 ~~~~RL~kEl~~l~~~~--~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (154)
T 2c2v_B 5 GLPRRIIKETQRLLAEP--VPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNV 82 (154)
T ss_dssp SCCHHHHHHHHHHHHSC--CTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcC
Confidence 36799999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCCC
Q 031561 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPK 155 (157)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~~ 155 (157)
+ .+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||++.
T Consensus 83 ~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~-~~d~~~f~~~ar~~~~~~a~~~ 153 (154)
T 2c2v_B 83 D-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQW-KTNEAQAIETARAWTRLYAMNN 153 (154)
T ss_dssp C-TTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHH-HHHHHHHHHHHHHHHHHHSSCC
T ss_pred c-cCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH-HHCHHHHHHHHHHHHHHhcCCC
Confidence 8 899999999999999999999999999999999999999999999999 7899999999999999999864
No 3
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=4e-53 Score=305.84 Aligned_cols=150 Identities=36% Similarity=0.773 Sum_probs=145.3
Q ss_pred Cc-hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeecccc
Q 031561 1 MQ-ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFH 79 (157)
Q Consensus 1 M~-~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 79 (157)
|+ .|.+||++|++++++++ ++|+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+|||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~--~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDP--PAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFH 78 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSC--CTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CChHHHHHHHHHHHHHHhCC--CCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCccc
Confidence 77 58999999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCC
Q 031561 80 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMP 154 (157)
Q Consensus 80 Pni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~ 154 (157)
|||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||++
T Consensus 79 Pnv~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~-~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 79 PNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMY-SESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp TTBC-TTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHH-HHCHHHHHHHHHHHHHHHCC-
T ss_pred CCCC-CCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHH-HHCHHHHHHHHHHHHHHHccc
Confidence 9999 699999999999999999999999999999999999999999999999 889999999999999999975
No 4
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-53 Score=312.41 Aligned_cols=151 Identities=34% Similarity=0.736 Sum_probs=145.5
Q ss_pred Cc-hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeecccc
Q 031561 1 MQ-ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFH 79 (157)
Q Consensus 1 M~-~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 79 (157)
|+ .|.+||++|+++|++++ ++|+++.+.++|+++|+++|.||++|+|+||.|+++|.||.+||++||+|+|.|+|||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~--~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 78 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDA--PPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 78 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSC--CTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CChHHHHHHHHHHHHHHhCC--CCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCcc
Confidence 77 58999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCCC
Q 031561 80 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPK 155 (157)
Q Consensus 80 Pni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~~ 155 (157)
|||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||+.+
T Consensus 79 PNI~-~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~-~~d~~~y~~~~r~~~~~~a~~~ 152 (169)
T 1ayz_A 79 PNVY-ANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLF-KDHKSQYVKRVKETVEKSWEDD 152 (169)
T ss_dssp TTBC-TTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHH-HHCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC-CCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHH-HHCHHHHHHHHHHHHHHHcCCC
Confidence 9999 799999999999999999999999999999999999999999999999 8899999999999999999753
No 5
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=4.5e-53 Score=307.61 Aligned_cols=151 Identities=40% Similarity=0.717 Sum_probs=144.5
Q ss_pred Cc-hHHHHHHHHHHHHHhc---CCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeec
Q 031561 1 MQ-ASRARLFKEYKEVQRE---KSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTK 76 (157)
Q Consensus 1 M~-~~~~Rl~~E~~~l~~~---~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 76 (157)
|+ .|.+||++|+++|+++ + +.|+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~--~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 82 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETS--KNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK 82 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHH--TTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred chHHHHHHHHHHHHHHHhcCCCC--CCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCC
Confidence 55 4789999999999985 5 7899999999999999999999999999999999999999999999999999999
Q ss_pred cccCccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCC
Q 031561 77 IFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMP 154 (157)
Q Consensus 77 i~HPni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~ 154 (157)
||||||+..+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||++
T Consensus 83 i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~-~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 83 IWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQY-KQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp CCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH-HHCHHHHHHHHHHHHHHHSCC
T ss_pred CCccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH-HHCHHHHHHHHHHHHHHhhcC
Confidence 99999996699999999999999999999999999999999999999999999999 789999999999999999974
No 6
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=2.6e-53 Score=305.86 Aligned_cols=147 Identities=43% Similarity=0.780 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCccc
Q 031561 4 SRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVH 83 (157)
Q Consensus 4 ~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~ 83 (157)
+.+||++|++++++++ ++|+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 2 ~~~RL~kEl~~l~~~~--~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 79 (149)
T 2r0j_A 2 IPRRITKETQNLANEP--PPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNID 79 (149)
T ss_dssp CCHHHHHHHHHHHHSC--CTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHHHhCC--CCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCC
Confidence 4699999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCC
Q 031561 84 FKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMP 154 (157)
Q Consensus 84 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~ 154 (157)
.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||++
T Consensus 80 -~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~-~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 80 -KLGRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHF-KQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp -TTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHH-HHCHHHHHHHHHHHHHHHSCC
T ss_pred -CCCEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHH-HHCHHHHHHHHHHHHHHHccC
Confidence 789999999999999999999999999999999999999999999999 789999999999999999986
No 7
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=6.5e-53 Score=308.43 Aligned_cols=146 Identities=38% Similarity=0.750 Sum_probs=143.0
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCcc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 82 (157)
.+.+||++|++++++++ ++||++.++++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 21 ~~~~RL~kEl~~l~~~~--~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI 98 (166)
T 2ayv_A 21 GALKRINKELNDLSKDP--PTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNI 98 (166)
T ss_dssp THHHHHHHHHHHHHHSC--CTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcC
Confidence 47899999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHc
Q 031561 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAA 152 (157)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a 152 (157)
+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||
T Consensus 99 ~-~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~-~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 99 N-SQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLY-KSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp C-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH-HHCHHHHHHHHHHHHHHHC
T ss_pred C-CCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHH-HHCHHHHHHHHHHHHHHhC
Confidence 9 799999999999999999999999999999999999999999999999 7899999999999999998
No 8
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=7.5e-53 Score=303.81 Aligned_cols=147 Identities=38% Similarity=0.763 Sum_probs=143.6
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCcc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 82 (157)
.|.+||++|++++++++ ++|+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 4 ~~~~RL~kEl~~l~~~~--~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (150)
T 1z2u_A 4 MALKRIQKELQDLGRDP--PAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 81 (150)
T ss_dssp HHHHHHHHHHHHHHHSC--CSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcC
Confidence 47899999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcC
Q 031561 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 153 (157)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~ 153 (157)
+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||+
T Consensus 82 ~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~-~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 82 N-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY-KTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp C-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH-HHCHHHHHHHHHHHHHHHCC
T ss_pred C-CCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHH-HHHHHHHHHHHHHHHHHHhC
Confidence 9 799999999999999999999999999999999999999999999999 78999999999999999995
No 9
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.9e-53 Score=307.09 Aligned_cols=146 Identities=32% Similarity=0.661 Sum_probs=142.6
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCcc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 82 (157)
.+.+||++|++++++++ ++||++.++++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 13 ~~~~RL~kEl~~l~~~~--~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 90 (158)
T 1zdn_A 13 HIIRLVYKEVTTLTADP--PDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNV 90 (158)
T ss_dssp HHHHHHHHHHHHHHHSC--CTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCC
Confidence 36799999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHc
Q 031561 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAA 152 (157)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a 152 (157)
+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+||++||
T Consensus 91 ~-~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~-~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 91 G-ANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLL-LENYEEYAARARLLTEIHG 158 (158)
T ss_dssp C-TTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHH-HHCHHHHHHHHHHHHHHHC
T ss_pred C-CCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH-HHCHHHHHHHHHHHHHHhC
Confidence 9 789999999999999999999999999999999999999999999999 8899999999999999998
No 10
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=9.6e-53 Score=307.34 Aligned_cols=147 Identities=37% Similarity=0.766 Sum_probs=143.6
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCcc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 82 (157)
.+.+||++|++++++++ ++||++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 19 ~~~~RL~kEl~~l~~~~--~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV 96 (165)
T 2c4o_A 19 MALKRIHKELNDLARDP--PAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 96 (165)
T ss_dssp HHHHHHHHHHHHHHSSC--CTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcC
Confidence 47899999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcC
Q 031561 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 153 (157)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~ 153 (157)
+ .+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++| .+|+++|+++||+|+++||+
T Consensus 97 ~-~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~-~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 97 N-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY-KTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp C-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH-HHCHHHHHHHHHHHHHHTTC
T ss_pred C-CCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHH-HHHHHHHHHHHHHHHHHHhC
Confidence 9 799999999999999999999999999999999999999999999999 78999999999999999995
No 11
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=2.1e-53 Score=306.36 Aligned_cols=147 Identities=39% Similarity=0.712 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEecCC-CcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCcc
Q 031561 4 SRARLFKEYKEVQREKSADPDIQLVCDDS-NIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (157)
Q Consensus 4 ~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~-n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 82 (157)
|.+||++|++++++++ ++|+++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 2 ~~~RL~~El~~l~~~~--~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni 79 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDP--AAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNI 79 (149)
T ss_dssp CHHHHHHHHHHHHHCG--GGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred hHHHHHHHHHHHHhCC--CCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCC
Confidence 6799999999999999 89999999887 99999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcC
Q 031561 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 153 (157)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~ 153 (157)
+..+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||+
T Consensus 80 ~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~-~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 80 SSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHY-LRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp CSSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHH-HHCSSHHHHHHHHHHHHHCC
T ss_pred cCCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH-HHCHHHHHHHHHHHHHHhcC
Confidence 94499999999999999999999999999999999999999999999999 78999999999999999995
No 12
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=3.5e-53 Score=307.04 Aligned_cols=150 Identities=39% Similarity=0.732 Sum_probs=145.6
Q ss_pred chHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCc
Q 031561 2 QASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (157)
Q Consensus 2 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 81 (157)
+.|.+||++|++++++++ ++||++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 4 ~~~~~RL~kE~~~l~~~~--~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDP--VPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPN 81 (155)
T ss_dssp CSCCHHHHHHHHHHHHSC--CTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred HHHHHHHHHHHHHHHhCC--CCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCC
Confidence 457899999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCCC
Q 031561 82 VHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPK 155 (157)
Q Consensus 82 i~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~~ 155 (157)
|+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||++.
T Consensus 82 v~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~-~~~~~~f~~~~r~~~~~~a~~~ 153 (155)
T 1jat_A 82 ID-RLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDW-IKNEQGAKAKAREWTKLYAKKK 153 (155)
T ss_dssp BC-TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHH-HHCHHHHHHHHHHHHHHHSEEC
T ss_pred CC-CCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHH-HHCHHHHHHHHHHHHHHhcccC
Confidence 99 899999999999999999999999999999999999999999999999 7899999999999999999865
No 13
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-52 Score=306.01 Aligned_cols=149 Identities=40% Similarity=0.697 Sum_probs=145.3
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCcc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 82 (157)
.+.+||++|++++++++ ++||++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 4 ~~~~RL~kEl~~l~~~~--~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 4 QRASRLKRELHMLATEP--PPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp HHHHHHHHHHHHHHHSC--CTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 57899999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeeeccCCC----CCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCCC
Q 031561 83 HFKTGEICLDILK----NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPK 155 (157)
Q Consensus 83 ~~~~G~icl~~l~----~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~~ 155 (157)
+ .+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||+.+
T Consensus 82 ~-~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~-~~~~~~y~~~~r~~~~~~a~~~ 156 (169)
T 1yh2_A 82 D-SAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEF-KYNKPAFLKNARQWTEKHARQK 156 (169)
T ss_dssp C-TTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH-HHCHHHHHHHHHHHHHHHSCCC
T ss_pred C-cCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHH-HhhHHHHHHHHHHHHHHHcccc
Confidence 9 89999999998 8999999999999999999999999999999999999 7899999999999999999875
No 14
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-52 Score=311.84 Aligned_cols=151 Identities=37% Similarity=0.734 Sum_probs=141.1
Q ss_pred hHHHHHHHHHHHHHhcCCC-----------CCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCee
Q 031561 3 ASRARLFKEYKEVQREKSA-----------DPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQV 71 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~-----------~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v 71 (157)
.|.+||++|+++|++++.. ..||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 111 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKM 111 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeE
Confidence 4679999999999998820 17999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccCccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHH
Q 031561 72 RFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLA 151 (157)
Q Consensus 72 ~f~t~i~HPni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~ 151 (157)
+|.|+||||||+..+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++|
T Consensus 112 ~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~-~~d~~~f~~~ar~~t~~y 190 (193)
T 2f4z_A 112 KFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMM-IENHPLFVQTAKLWTETF 190 (193)
T ss_dssp EESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH-HHCHHHHHHHHHHHHHHH
T ss_pred EEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHH-HHCHHHHHHHHHHHHHHH
Confidence 9999999999986699999999999999999999999999999999999999999999999 789999999999999999
Q ss_pred cCC
Q 031561 152 AMP 154 (157)
Q Consensus 152 a~~ 154 (157)
|++
T Consensus 191 a~~ 193 (193)
T 2f4z_A 191 AKE 193 (193)
T ss_dssp CC-
T ss_pred ccC
Confidence 974
No 15
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=5.6e-52 Score=303.53 Aligned_cols=149 Identities=31% Similarity=0.670 Sum_probs=142.5
Q ss_pred Cc-hHHHHHHHHHHHHHhcCCCCCCeEEEecC-CCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccc
Q 031561 1 MQ-ASRARLFKEYKEVQREKSADPDIQLVCDD-SNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (157)
Q Consensus 1 M~-~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~-~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 78 (157)
|+ .|.+||++|+++|++++ ++||++.+.+ +|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||
T Consensus 1 M~~~a~~RL~kEl~~l~~~~--~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 78 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDS--PPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSIL 78 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSC--CTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCS
T ss_pred CChHHHHHHHHHHHHHHhCC--CCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCc
Confidence 76 47899999999999999 9999999865 69999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCeeeccCC-------------CCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHH
Q 031561 79 HPNVHFKTGEICLDIL-------------KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMAR 145 (157)
Q Consensus 79 HPni~~~~G~icl~~l-------------~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~ 145 (157)
||||+ .+|.||+++| .++|+|+++|++||.+|+++|.+|++++|+|.+||++| .+|+++|.++||
T Consensus 79 HPNv~-~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~-~~~~~~y~~~v~ 156 (165)
T 2ucz_A 79 HPNIY-PNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILW-RDNRPEFERQVK 156 (165)
T ss_dssp CTTBC-TTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHH-HTTHHHHHHHHH
T ss_pred cCCCC-CCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHH-HHCHHHHHHHHH
Confidence 99998 7999999999 57899999999999999999999999999999999999 889999999999
Q ss_pred HHHHHHcC
Q 031561 146 MYTRLAAM 153 (157)
Q Consensus 146 ~~~~k~a~ 153 (157)
+|+++++.
T Consensus 157 ~~~~~~~~ 164 (165)
T 2ucz_A 157 LSILKSLG 164 (165)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhh
Confidence 99999986
No 16
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=4.2e-52 Score=310.67 Aligned_cols=149 Identities=35% Similarity=0.639 Sum_probs=144.9
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccC
Q 031561 1 MQASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHP 80 (157)
Q Consensus 1 M~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 80 (157)
|+.+.+||++||++|++++ ++||++.+.++|+++|+++|.||++|+|+||+|+|.|.||++||++||+|+|.|+||||
T Consensus 46 ~s~a~~RL~kEl~~l~~~~--~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 123 (194)
T 3bzh_A 46 LSTSAKRIQKELADITLDP--PPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHC 123 (194)
T ss_dssp HHHHHHHHHHHHHHHHHSC--CTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBT
T ss_pred ccHHHHHHHHHHHHHHhCC--CCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccc
Confidence 4568899999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcC
Q 031561 81 NVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 153 (157)
Q Consensus 81 ni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~ 153 (157)
||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||+
T Consensus 124 NV~-~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~-~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 124 NIN-SQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQY-MTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp TBC-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH-HHCHHHHHHHHHHHHHHHCC
T ss_pred eEC-CCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHH-HHCHHHHHHHHHHHHHHhhC
Confidence 999 799999999999999999999999999999999999999999999999 88999999999999999995
No 17
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.8e-52 Score=317.09 Aligned_cols=151 Identities=41% Similarity=0.794 Sum_probs=146.2
Q ss_pred chHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCc
Q 031561 2 QASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (157)
Q Consensus 2 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 81 (157)
+.|.+||++|++++++++ ++||++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+|||||
T Consensus 22 s~a~~RL~kEl~~l~~~~--~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPN 99 (216)
T 2pwq_A 22 SKELLRLQKELKDIENEN--VQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPN 99 (216)
T ss_dssp CHHHHHHHHHHHHHHHSC--TTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred CHHHHHHHHHHHHHHhCC--CCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCC
Confidence 358899999999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCCC
Q 031561 82 VHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPK 155 (157)
Q Consensus 82 i~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~~ 155 (157)
|+..+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||+..
T Consensus 100 I~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~-~~d~~~f~~~ar~~t~~ya~~~ 172 (216)
T 2pwq_A 100 ISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMY-KENHALFVKTASVWTKTFATGP 172 (216)
T ss_dssp BCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH-HHCHHHHHHHHHHHHHHHSCCC
T ss_pred CcCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH-HHCHHHHHHHHHHHHHHhcCCC
Confidence 986699999999999999999999999999999999999999999999999 7899999999999999999864
No 18
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=3.9e-52 Score=313.01 Aligned_cols=154 Identities=40% Similarity=0.707 Sum_probs=144.7
Q ss_pred Cc-hHHHHHHHHHHHHHhcCC-CCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccc
Q 031561 1 MQ-ASRARLFKEYKEVQREKS-ADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (157)
Q Consensus 1 M~-~~~~Rl~~E~~~l~~~~~-~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 78 (157)
|+ .|.+||++|++++++++. .+.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 66 589999999999998631 1679999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCCC
Q 031561 79 HPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPK 155 (157)
Q Consensus 79 HPni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~~ 155 (157)
||||+..+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||+..
T Consensus 82 HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~-~~~~~~f~~~a~~~~~~~a~~~ 157 (201)
T 3k9o_A 82 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQY-KQNPEMFKQTARLWAHVYAGAP 157 (201)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH-HHCHHHHHHHHHHHHHHHHCCC
T ss_pred cCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHH-HHCHHHHHHHHHHHHHHhcccc
Confidence 999986699999999999999999999999999999999999999999999999 8899999999999999999874
No 19
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=9.8e-52 Score=301.99 Aligned_cols=148 Identities=31% Similarity=0.634 Sum_probs=142.7
Q ss_pred chHHHHHHHHHHHHHhcCCCCCCeEEEecCC-CcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccC
Q 031561 2 QASRARLFKEYKEVQREKSADPDIQLVCDDS-NIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHP 80 (157)
Q Consensus 2 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~-n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 80 (157)
+.|.+||++|++++++++ ++||++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~--~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNP--PEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP 79 (164)
T ss_dssp CHHHHHHHHHHHHHHHSC--CTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred cHHHHHHHHHHHHHHhCC--CCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccC
Confidence 368999999999999999 99999998766 999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCeeeccCCC-------------CCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHH
Q 031561 81 NVHFKTGEICLDILK-------------NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMY 147 (157)
Q Consensus 81 ni~~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~ 147 (157)
||+ .+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+||++| .+|+++|+++||+|
T Consensus 80 NV~-~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~-~~~~~~f~~~~~~~ 157 (164)
T 3h8k_A 80 NIY-PDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMW-RDDREQFYKIAKQI 157 (164)
T ss_dssp TBC-TTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHH-HHCHHHHHHHHHHH
T ss_pred CCC-CCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHH-HHCHHHHHHHHHHH
Confidence 998 89999999997 7899999999999999999999999999999999999 78999999999999
Q ss_pred HHHHcC
Q 031561 148 TRLAAM 153 (157)
Q Consensus 148 ~~k~a~ 153 (157)
++|+++
T Consensus 158 ~~~s~~ 163 (164)
T 3h8k_A 158 VQKSLG 163 (164)
T ss_dssp HHHHHT
T ss_pred HHHhhc
Confidence 999986
No 20
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=8.1e-52 Score=300.15 Aligned_cols=147 Identities=31% Similarity=0.669 Sum_probs=142.7
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCcc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 82 (157)
.+.+||++|++++++++ ++||++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 9 ~~~~RL~kEl~~l~~~~--~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 86 (156)
T 2e2c_A 9 SVSKRLQQELRTLLMSG--DPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNV 86 (156)
T ss_dssp CHHHHHHHHHHHHHHHC--CTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCC
Confidence 47899999999999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCC
Q 031561 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMP 154 (157)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~ 154 (157)
+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| +|+++|.++||+|+++||..
T Consensus 87 ~-~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~--~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 87 D-QSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW--SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp C-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT--TCHHHHHHHHHHHHHHHHHC
T ss_pred c-cCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh--cCHHHHHHHHHHHHHHhccC
Confidence 9 799999999999999999999999999999999999999999999999 49999999999999999865
No 21
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=6.4e-52 Score=300.96 Aligned_cols=149 Identities=28% Similarity=0.531 Sum_probs=141.7
Q ss_pred Cc-hHHHHHHHHHHHHHhcCCCCCCeEEEecC-----CCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEe
Q 031561 1 MQ-ASRARLFKEYKEVQREKSADPDIQLVCDD-----SNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFL 74 (157)
Q Consensus 1 M~-~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~-----~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~ 74 (157)
|+ .|.+||++|++++++++ ++|+++.+.+ +|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~--~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 78 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDH--PFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFP 78 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCC--CTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECC
T ss_pred CChHHHHHHHHHHHHHHhCC--CCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeecc
Confidence 76 58899999999999999 9999999764 4899999999999999999999999999999999999999999
Q ss_pred eccccCccccCCCeeeccCCCC--CCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHc
Q 031561 75 TKIFHPNVHFKTGEICLDILKN--AWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAA 152 (157)
Q Consensus 75 t~i~HPni~~~~G~icl~~l~~--~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a 152 (157)
|+||||||+ .+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||
T Consensus 79 t~i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~-~~~~~~y~~~~~~~~~~~a 156 (157)
T 2gjd_A 79 AGFYHPNVY-PSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSF-SRNKAEYDKKVLLQAKQYS 156 (157)
T ss_dssp TTCCCTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHH-HHCHHHHHHHHHHHHHHTB
T ss_pred CCCccCCCC-CCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHH-HHCHHHHHHHHHHHHHHhc
Confidence 999999998 899999999987 799999999999999999999999999999999999 7899999999999999999
Q ss_pred C
Q 031561 153 M 153 (157)
Q Consensus 153 ~ 153 (157)
+
T Consensus 157 ~ 157 (157)
T 2gjd_A 157 K 157 (157)
T ss_dssp C
T ss_pred C
Confidence 5
No 22
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1e-51 Score=301.35 Aligned_cols=147 Identities=31% Similarity=0.605 Sum_probs=141.7
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecCC-----CcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeecc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDDS-----NIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKI 77 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~-----n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i 77 (157)
.|.+||++|++++++++ ++|+++.+.++ |+++|+++|.||++|+|+||.|++.|.||++||++||+|+|.|+|
T Consensus 10 ~~~~RL~kEl~~l~~~~--p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 10 LCKTRLQEERKQWRRDH--PFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp HHHHHHHHHHHHHHHSC--CTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 47899999999999999 99999998765 899999999999999999999999999999999999999999999
Q ss_pred ccCccccCCCeeeccCCCCC--CCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcC
Q 031561 78 FHPNVHFKTGEICLDILKNA--WSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 153 (157)
Q Consensus 78 ~HPni~~~~G~icl~~l~~~--W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~ 153 (157)
|||||+ .+|.||+++|... |+|+++|++||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|++|||.
T Consensus 88 ~HPnV~-~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~-~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 88 FHPNVY-PSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMF-KKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp CSTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHH-HHCHHHHHHHHHHHHHHTCC
T ss_pred ccCCCC-CCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHH-HHCHHHHHHHHHHHHHHhCc
Confidence 999998 8999999999864 99999999999999999999999999999999999 88999999999999999984
No 23
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=2.4e-51 Score=299.02 Aligned_cols=150 Identities=29% Similarity=0.570 Sum_probs=142.7
Q ss_pred Cc-hHHHHHHHHHHHHHhcCCCCCCeEEEecC-----CCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEe
Q 031561 1 MQ-ASRARLFKEYKEVQREKSADPDIQLVCDD-----SNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFL 74 (157)
Q Consensus 1 M~-~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~-----~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~ 74 (157)
|+ .|.+||++|++++++++ ++|+.+.+.. +|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 4 M~~~a~~RL~kE~~~l~~~~--~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 81 (161)
T 2grr_A 4 MSGIALSRLAQERKAWRKDH--PFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFE 81 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHSC--CTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred ccHHHHHHHHHHHHHHHhCC--CCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEe
Confidence 66 47899999999999999 9999998753 6899999999999999999999999999999999999999999
Q ss_pred eccccCccccCCCeeeccCCCC--CCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHc
Q 031561 75 TKIFHPNVHFKTGEICLDILKN--AWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAA 152 (157)
Q Consensus 75 t~i~HPni~~~~G~icl~~l~~--~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a 152 (157)
|+||||||+ .+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+||++||
T Consensus 82 t~i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~-~~~~~~y~~~~~~~~~~~a 159 (161)
T 2grr_A 82 PPLFHPNVY-PSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIY-CQNRVEYEKRVRAQAKKFA 159 (161)
T ss_dssp SCCCSTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH-HHCHHHHHHHHHHHHHHTC
T ss_pred cCcccCCCC-CCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHH-HHCHHHHHHHHHHHHHHHh
Confidence 999999999 899999999986 899999999999999999999999999999999999 7899999999999999999
Q ss_pred CC
Q 031561 153 MP 154 (157)
Q Consensus 153 ~~ 154 (157)
+.
T Consensus 160 ~~ 161 (161)
T 2grr_A 160 PS 161 (161)
T ss_dssp C-
T ss_pred cC
Confidence 74
No 24
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=3.8e-51 Score=296.35 Aligned_cols=148 Identities=32% Similarity=0.657 Sum_probs=142.7
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEE-EecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQL-VCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~-~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 81 (157)
.|.+||++|++++++++ ++|+++ .++++|+++|+++|. |++|+|+||.|+++|.||++||++||+|+|.|++||||
T Consensus 4 ~~~~RL~kEl~~l~~~~--~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKP--PPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPN 80 (155)
T ss_dssp -CHHHHHHHHHHHHHSC--CTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred hHHHHHHHHHHHHHhCC--CCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCc
Confidence 47899999999999999 899999 788999999999999 99999999999999999999999999999999999999
Q ss_pred cccCCCeeeccCC-CCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCCC
Q 031561 82 VHFKTGEICLDIL-KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPK 155 (157)
Q Consensus 82 i~~~~G~icl~~l-~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~~ 155 (157)
|+ .+|.||+++| .++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||++.
T Consensus 81 V~-~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~-~~~~~~y~~~~r~~~~~~a~~~ 153 (155)
T 1wzv_A 81 VD-ENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLL-TQNPELFRKNAEEFTLRFGVDR 153 (155)
T ss_dssp BC-TTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHH-HHCHHHHHHHHHHHHHHHCEEC
T ss_pred CC-CCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHH-HHHHHHHHHHHHHHHHHhcccC
Confidence 99 7999999999 79999999999999999999999999999999999999 8899999999999999999864
No 25
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.8e-51 Score=301.52 Aligned_cols=149 Identities=31% Similarity=0.569 Sum_probs=142.5
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCcc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 82 (157)
.+.+||++||+++++++ ++||++.++++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.|+||||||
T Consensus 30 ~~~~RL~kEl~~l~~~~--~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 107 (179)
T 1i7k_A 30 PVGKRLQQELMTLMMSG--DKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNV 107 (179)
T ss_dssp CHHHHHHHHHHHHHHHC--CTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcc
Confidence 47899999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCCCC
Q 031561 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPKK 156 (157)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~~~ 156 (157)
+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| +|+++|.++|+++++++++++.
T Consensus 108 ~-~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~--~d~~~f~~~v~~~v~~~~~~~~ 178 (179)
T 1i7k_A 108 D-TQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW--KNPTAFKKYLQETYSKQVTSQE 178 (179)
T ss_dssp C-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT--TSHHHHHHHHHHHHHTTCC---
T ss_pred c-cCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh--hCHHHHHHHHHHHHHHHhcccC
Confidence 9 799999999999999999999999999999999999999999999999 6999999999999999998864
No 26
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=8.5e-51 Score=314.01 Aligned_cols=154 Identities=40% Similarity=0.707 Sum_probs=145.5
Q ss_pred Cc-hHHHHHHHHHHHHHhcCC-CCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccc
Q 031561 1 MQ-ASRARLFKEYKEVQREKS-ADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (157)
Q Consensus 1 M~-~~~~Rl~~E~~~l~~~~~-~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 78 (157)
|+ .|.+||++||++|++++. .+.|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|+||
T Consensus 54 Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 133 (253)
T 3e46_A 54 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 133 (253)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCc
Confidence 44 478999999999998731 1679999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCCC
Q 031561 79 HPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPK 155 (157)
Q Consensus 79 HPni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~~ 155 (157)
||||+..+|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++| .+|+++|.++||+|+++||+..
T Consensus 134 HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~-~~d~~~f~~~ar~~t~~yA~~~ 209 (253)
T 3e46_A 134 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQY-KQNPEMFKQTARLWAHVYAGAP 209 (253)
T ss_dssp BTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH-HHCHHHHHHHHHHHHHHHHCCS
T ss_pred cCCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHH-HHCHHHHHHHHHHHHHHhcccc
Confidence 999986699999999999999999999999999999999999999999999999 8899999999999999999874
No 27
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=2.2e-50 Score=295.62 Aligned_cols=148 Identities=31% Similarity=0.561 Sum_probs=141.0
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCeEEEe-cCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeecccc
Q 031561 1 MQASRARLFKEYKEVQREKSADPDIQLVC-DDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFH 79 (157)
Q Consensus 1 M~~~~~Rl~~E~~~l~~~~~~~~~~~~~~-~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 79 (157)
++.+.+||++|++++++++ ++||++.+ +++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 12 ~s~~~~RL~kEl~~l~~~~--~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 88 (167)
T 3fn1_B 12 VSVRDKLLVKEVAELEANL--PCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWH 88 (167)
T ss_dssp CCHHHHHHHHHHHHHGGGS--CTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCC
T ss_pred hhHHHHHHHHHHHHHHhCC--CCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCccc
Confidence 3568899999999999999 99999995 567899999999 8999999999999999999999999999999999999
Q ss_pred CccccCCCeeeccCCCC------CCCCCCCHHHHHHHHHHHhcC-CCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHc
Q 031561 80 PNVHFKTGEICLDILKN------AWSPAWTLQSVCRAIIALMAH-PEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAA 152 (157)
Q Consensus 80 Pni~~~~G~icl~~l~~------~W~p~~~i~~il~~i~~ll~~-p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a 152 (157)
|||+ .+|.||+++|.. +|+|+++|.+||.+|+++|.+ ||+++|+|.|||++| .+|+++|.++||+|+++||
T Consensus 89 Pnv~-~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~-~~~~~~f~~~~r~~~~~~A 166 (167)
T 3fn1_B 89 PNIT-ETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHH-LRDKEDFRNKVDDYIKRYA 166 (167)
T ss_dssp SSBC-TTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHH-HHCHHHHHHHHHHHHHHHC
T ss_pred CCCC-CCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHH-HHCHHHHHHHHHHHHHHhc
Confidence 9999 899999999985 799999999999999999999 699999999999999 8899999999999999999
Q ss_pred C
Q 031561 153 M 153 (157)
Q Consensus 153 ~ 153 (157)
+
T Consensus 167 ~ 167 (167)
T 3fn1_B 167 R 167 (167)
T ss_dssp C
T ss_pred C
Confidence 5
No 28
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=2.9e-51 Score=310.22 Aligned_cols=151 Identities=38% Similarity=0.692 Sum_probs=143.9
Q ss_pred chHHHHHHHHHHHHHhcCCCCCCeEEEecCCC-cceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccC
Q 031561 2 QASRARLFKEYKEVQREKSADPDIQLVCDDSN-IFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHP 80 (157)
Q Consensus 2 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n-~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 80 (157)
+.+.+||++|++++++++ ++||++.+.++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 1 s~a~~RL~kEl~~l~~~~--~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HP 78 (215)
T 1tte_A 1 SSRAKRIMKEIQAVKDDP--AAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHP 78 (215)
T ss_dssp CTTHHHHHHHHHHHHTTT--CTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCS
T ss_pred ChHHHHHHHHHHHHHhCC--CCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccC
Confidence 468899999999999999 999999987764 56999999999999999999999999999999999999999999999
Q ss_pred ccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCCC
Q 031561 81 NVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPK 155 (157)
Q Consensus 81 ni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~~ 155 (157)
||+..+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|++.|.++||+|+++||+..
T Consensus 79 NI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~-~~d~~~f~~~ar~~t~~yA~~~ 152 (215)
T 1tte_A 79 NISSVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHY-LRDRESFNKTAALWTRLYASET 152 (215)
T ss_dssp SSCSSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHH-HHCHHHHHHHHHHHHHHSSCCC
T ss_pred cCcCCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHH-HHCHHHHHHHHHHHHHHhccCC
Confidence 9994499999999999999999999999999999999999999999999999 7899999999999999999864
No 29
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.5e-50 Score=295.40 Aligned_cols=146 Identities=25% Similarity=0.524 Sum_probs=139.3
Q ss_pred Cc-hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeecccc
Q 031561 1 MQ-ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFH 79 (157)
Q Consensus 1 M~-~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 79 (157)
|+ .|.+||++|+++|++++ ++|+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+|||
T Consensus 20 M~~~a~~RL~kEl~~l~~~~--~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 97 (169)
T 1yrv_A 20 MHGRAYLLLHRDFCDLKENN--YKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFH 97 (169)
T ss_dssp GGCHHHHHHHHHHHHHHHHC--CTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCC
T ss_pred cChHHHHHHHHHHHHHHhCC--CCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCcc
Confidence 55 47899999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCeeeccCCC--CCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHH
Q 031561 80 PNVHFKTGEICLDILK--NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRL 150 (157)
Q Consensus 80 Pni~~~~G~icl~~l~--~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k 150 (157)
|||++.+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+||++| .+|+++|.++ |+++++
T Consensus 98 PNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~-~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 98 PNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARIL-VKDESLYRTI-LRLFNR 168 (169)
T ss_dssp TTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHH-HSCHHHHHHH-HHHHC-
T ss_pred CcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHH-HHCHHHHHHH-HHHhhC
Confidence 9995589999999998 8999999999999999999999999999999999999 8999999998 888865
No 30
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1.8e-49 Score=291.84 Aligned_cols=153 Identities=37% Similarity=0.724 Sum_probs=139.6
Q ss_pred Cc-hHHHHHHHHHHHHHh-c-CC-----CCC--CeEEEe-cCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCC
Q 031561 1 MQ-ASRARLFKEYKEVQR-E-KS-----ADP--DIQLVC-DDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPP 69 (157)
Q Consensus 1 M~-~~~~Rl~~E~~~l~~-~-~~-----~~~--~~~~~~-~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP 69 (157)
|+ .+.+||++|++++++ + +. ... ++.+.+ +++|+++|+++|.||++|+|+||.|+++|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 55 378999999999998 5 31 022 356777 7889999999999999999999999999999999999999
Q ss_pred eeEEee-ccccCccccCCCeeeccCCC-CCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhC-CHHHHHHHHHH
Q 031561 70 QVRFLT-KIFHPNVHFKTGEICLDILK-NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSG-DIRGFQSMARM 146 (157)
Q Consensus 70 ~v~f~t-~i~HPni~~~~G~icl~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~-~~~~f~~~a~~ 146 (157)
+|+|.| +||||||++.+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+||++| .+ |+++|.++||+
T Consensus 83 ~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~-~~~d~~~f~~~~~~ 161 (172)
T 2y9m_A 83 KISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNII-RCGDMSAYQGIVKY 161 (172)
T ss_dssp EEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH-TTTCHHHHHHHHHH
T ss_pred EEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHH-HhCCHHHHHHHHHH
Confidence 999999 99999998689999999999 8999999999999999999999999999999999999 77 99999999999
Q ss_pred HHHHHcCC
Q 031561 147 YTRLAAMP 154 (157)
Q Consensus 147 ~~~k~a~~ 154 (157)
|+++++.-
T Consensus 162 ~~~~~~~~ 169 (172)
T 2y9m_A 162 FLAERERI 169 (172)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHhh
Confidence 99999753
No 31
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=5.2e-51 Score=294.63 Aligned_cols=147 Identities=28% Similarity=0.652 Sum_probs=139.1
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCcc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 82 (157)
.|.+||++|++++++. |+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 2 sa~~Rl~kEl~~l~~~-----~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 76 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA-----GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNV 76 (152)
T ss_dssp -CCCHHHHTHHHHHHH-----TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred hHHHHHHHHHHhcCcC-----CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcC
Confidence 5779999999999874 57788889999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeeeccCCCCCCCCCCCHHHHHHH-HHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCCC
Q 031561 83 HFKTGEICLDILKNAWSPAWTLQSVCRA-IIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPK 155 (157)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~il~~-i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~~ 155 (157)
+..+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++| .+|+++|.++||+|+++||++.
T Consensus 77 ~~~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~-~~d~~~y~~~v~~~~~~~a~~~ 149 (152)
T 2onu_A 77 DEASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLL-MKDKNIYEEKVKEYVKLYASKD 149 (152)
T ss_dssp CTTTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHH-HHCHHHHHHHHHHHHHHHSCGG
T ss_pred cCcCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHH-HHCHHHHHHHHHHHHHHhccCc
Confidence 8559999999999999999999999999 6899999999999999999999 7899999999999999999864
No 32
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.1e-49 Score=295.53 Aligned_cols=148 Identities=31% Similarity=0.658 Sum_probs=140.6
Q ss_pred chHHHHHHHHHHHHHhcCCCCCCeEEE-ecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccC
Q 031561 2 QASRARLFKEYKEVQREKSADPDIQLV-CDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHP 80 (157)
Q Consensus 2 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 80 (157)
+.|.|||++||+++++++ ++||++. ++++|+++|+++|.||++|+|+||.|++.|.||++||++||+|+|.|+||||
T Consensus 6 ~~a~kRL~kEl~~l~~~~--~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 83 (183)
T 3rz3_A 6 PSSQKALLLELKGLQEEP--VEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHP 83 (183)
T ss_dssp CHHHHHHHHHHHHHHHSC--CTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCT
T ss_pred hHHHHHHHHHHHHHHhCC--CCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccC
Confidence 468999999999999999 9999999 7788999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCeeeccCCC-------------CCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhC------CHHHHH
Q 031561 81 NVHFKTGEICLDILK-------------NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSG------DIRGFQ 141 (157)
Q Consensus 81 ni~~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~------~~~~f~ 141 (157)
||+ .+|.||+++|. ++|+|+++|++||.+|+++|.+||+++|+|.|||++| .+ ++++|+
T Consensus 84 nV~-~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~-~~~~~~~~~~~~y~ 161 (183)
T 3rz3_A 84 NIY-ETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMY-RKWKESKGKDREYT 161 (183)
T ss_dssp TBC-TTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHH-HHHHHTTTCCCHHH
T ss_pred CCC-CCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH-HhcccccccHHHHH
Confidence 998 79999999997 7899999999999999999999999999999999999 55 789999
Q ss_pred HHHHHHHHHHcC
Q 031561 142 SMARMYTRLAAM 153 (157)
Q Consensus 142 ~~a~~~~~k~a~ 153 (157)
+++|++|++++.
T Consensus 162 ~~v~~~v~~s~~ 173 (183)
T 3rz3_A 162 DIIRKQVLGTKV 173 (183)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999864
No 33
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.4e-49 Score=285.87 Aligned_cols=143 Identities=29% Similarity=0.604 Sum_probs=137.2
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCeEEE-ecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeecccc
Q 031561 1 MQASRARLFKEYKEVQREKSADPDIQLV-CDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFH 79 (157)
Q Consensus 1 M~~~~~Rl~~E~~~l~~~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 79 (157)
|+.|.+||++|++++ ++ ++|+++. ++++|+++|+++| ||++|+|+||.|+++|.||++||++||+|+|.|+|||
T Consensus 4 ~~~~~~RL~kEl~~l--~~--~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL--NL--PKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYH 78 (160)
T ss_dssp CCHHHHHHHHHHHTC--CC--CTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred ccHHHHHHHHHHHhc--CC--CCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCcc
Confidence 577999999999999 46 7899998 7889999999998 9999999999999999999999999999999999999
Q ss_pred CccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHH
Q 031561 80 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRL 150 (157)
Q Consensus 80 Pni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k 150 (157)
|||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|++.
T Consensus 79 Pnv~-~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~-~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 79 PNID-LEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVL-QNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp TTBC-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHH-HSCHHHHHHHHHHHHHS
T ss_pred CcCC-CCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHH-HHCHHHHHHHHHHHHhh
Confidence 9999 799999999999999999999999999999999999999999999999 89999999999999874
No 34
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-49 Score=293.84 Aligned_cols=145 Identities=26% Similarity=0.600 Sum_probs=136.8
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCcc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 82 (157)
.|.+||++|++++++ +|+++.+. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||
T Consensus 25 ~a~~RL~kEl~~l~~-----~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV 98 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE-----SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNI 98 (179)
T ss_dssp HHHHHHHHHHHHHHH-----SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHhcCc-----CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcC
Confidence 378999999999975 36778876 678999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeeeccCCCCCCCCCCCHHHHHHH-HHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCC
Q 031561 83 HFKTGEICLDILKNAWSPAWTLQSVCRA-IIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMP 154 (157)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~il~~-i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~ 154 (157)
+..+|.||+++|.++|+|+++|++||.+ |+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||+.
T Consensus 99 ~~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~-~~d~~~y~~~vr~~~~~~a~~ 170 (179)
T 2z5d_A 99 DEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMY-LHRPEEYKQKIKEYIQKYATE 170 (179)
T ss_dssp CTTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHH-HHCHHHHHHHHHHHHHHHSSH
T ss_pred CCCCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHH-HHCHHHHHHHHHHHHHHHccc
Confidence 8449999999999999999999999999 9999999999999999999999 889999999999999999974
No 35
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=7.8e-50 Score=289.19 Aligned_cols=148 Identities=32% Similarity=0.728 Sum_probs=136.9
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEE-ecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLV-CDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 81 (157)
.|.+||++|++++++++ ++|+.+. ++++|+++|+++|. |++|+|+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 2 ~a~~RL~kEl~~l~~~~--~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCG--MKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPN 78 (154)
T ss_dssp --CTTHHHHHTTCSSSC--CSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred cHHHHHHHHHHHHHhCC--CCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCcccc
Confidence 36799999999999999 8899865 57789999999998 99999999999999999999999999999999999999
Q ss_pred cccCCCeeeccCCC-CCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCCC
Q 031561 82 VHFKTGEICLDILK-NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPK 155 (157)
Q Consensus 82 i~~~~G~icl~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~~ 155 (157)
|+ .+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|+++||++.
T Consensus 79 v~-~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~-~~~~~~f~~~~~~~~~~~a~~~ 151 (154)
T 1c4z_D 79 ID-EKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEY-SKDRKKFCKNAEEFTKKYGEKR 151 (154)
T ss_dssp BC-TTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHH-HTCSSTTHHHHHHHHTTC----
T ss_pred CC-CCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHH-HHhHHHHHHHHHHHHHHhcccC
Confidence 99 79999999997 8899999999999999999999999999999999999 8899999999999999999863
No 36
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=5.5e-49 Score=289.21 Aligned_cols=141 Identities=33% Similarity=0.711 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecC-CCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDD-SNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~-~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 81 (157)
.+.+||++|+++|++++ ++||++.+.+ +|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.|+|||||
T Consensus 17 ~~~~rL~kEl~~l~~~~--~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPN 94 (172)
T 2awf_A 17 RGSLLLRRQLAELNKNP--VEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPN 94 (172)
T ss_dssp TTHHHHHHHHHHHHHSC--CTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCC
Confidence 57899999999999999 9999999865 79999999999999999999999999999999999999999999999999
Q ss_pred cccCCCeeeccCCC-------------CCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHH-HHHHHHHHH
Q 031561 82 VHFKTGEICLDILK-------------NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIR-GFQSMARMY 147 (157)
Q Consensus 82 i~~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~-~f~~~a~~~ 147 (157)
|+ .+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+||++| .+|++ +|+++||+|
T Consensus 95 V~-~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~-~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 95 VD-KNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEW-REDRNGEFKRKVARC 172 (172)
T ss_dssp BC-TTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC------------------------------
T ss_pred CC-CCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHH-HHCcHHHHHHHHHhC
Confidence 98 79999999996 6899999999999999999999999999999999999 88999 999999976
No 37
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=4.7e-48 Score=316.65 Aligned_cols=150 Identities=36% Similarity=0.719 Sum_probs=146.7
Q ss_pred chHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCc
Q 031561 2 QASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (157)
Q Consensus 2 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 81 (157)
+.|.|||++|++++++++ ++|+++.|.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 2 s~a~~RL~kEl~~l~~~~--~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 79 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDP--PAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 79 (399)
T ss_dssp HHHHHHHHHHHHHHHHSC--CSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTT
T ss_pred cHHHHHHHHHHHHHHhCC--CCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccc
Confidence 678999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCCC
Q 031561 82 VHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMPK 155 (157)
Q Consensus 82 i~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~~ 155 (157)
|+ .+|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++| .+|+++|.++||+|+++||+..
T Consensus 80 v~-~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~-~~d~~~y~~~~~~~~~~~a~~~ 151 (399)
T 4ddg_A 80 IN-SNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY-KTDREKYNRIAREWTQKYAMGG 151 (399)
T ss_dssp BC-TTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH-HHCHHHHHHHHHHHHHHHTSCT
T ss_pred cC-CCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHH-HHCHHHHHHHHHHHHHHhhccc
Confidence 99 799999999999999999999999999999999999999999999999 8899999999999999999875
No 38
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=1e-48 Score=287.37 Aligned_cols=144 Identities=30% Similarity=0.659 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCccc
Q 031561 4 SRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVH 83 (157)
Q Consensus 4 ~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~ 83 (157)
+.+||++|++++++++ . ++ +.++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.|+||||||+
T Consensus 13 ~~~RL~~El~~l~~~~--~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~ 86 (171)
T 1yf9_A 13 SNRRREMDYMRLCNST--R-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVD 86 (171)
T ss_dssp CCHHHHHHHHHHHSSS--S-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHHHhCC--C-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCc
Confidence 5799999999999987 4 34 3578999999999999999999999999999999999999999999999999998
Q ss_pred cCCCeeeccCCCCCCCCCCCHHHHHHHH-HHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCC
Q 031561 84 FKTGEICLDILKNAWSPAWTLQSVCRAI-IALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMP 154 (157)
Q Consensus 84 ~~~G~icl~~l~~~W~p~~~i~~il~~i-~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~ 154 (157)
..+|.||+++|.++|+|+++|++||.+| ++||.+|++++|+|.+||++| .+|+++|.++||+|+++||+.
T Consensus 87 ~~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~-~~d~~~y~~~vr~~~~~~a~~ 157 (171)
T 1yf9_A 87 ERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLL-HADRVGFDALLREHVSTHATP 157 (171)
T ss_dssp TTTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHH-HHCHHHHHHHHHHHHHHHCCH
T ss_pred ccCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHH-HHCHHHHHHHHHHHHHHHcCh
Confidence 5599999999999999999999999997 799999999999999999999 889999999999999999975
No 39
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.2e-48 Score=285.73 Aligned_cols=142 Identities=28% Similarity=0.585 Sum_probs=136.3
Q ss_pred chHHHHHHHHHHHHHhcCCCCCCeEEE-ecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccC
Q 031561 2 QASRARLFKEYKEVQREKSADPDIQLV-CDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHP 80 (157)
Q Consensus 2 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 80 (157)
+.+.+||++|++++ ++ ++|+++. ++++|+++|+++| ||++|+|+||.|++.|.||++||++||+|+|.|+||||
T Consensus 25 ~~~~~RL~kEl~~l--~~--~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HP 99 (180)
T 2nvu_C 25 SAAQLRIQKDINEL--NL--PKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHP 99 (180)
T ss_dssp CHHHHHHHHHHHTC--CC--CTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBT
T ss_pred cHHHHHHHHHHHhc--CC--CCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccC
Confidence 46889999999999 56 7899998 8899999999998 99999999999999999999999999999999999999
Q ss_pred ccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHH
Q 031561 81 NVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRL 150 (157)
Q Consensus 81 ni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k 150 (157)
||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| .+|+++|.++||+|++.
T Consensus 100 NV~-~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~-~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 100 NID-LEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVL-QNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp TBC-TTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH-HHCHHHHHHHHHHHHHS
T ss_pred CCC-CCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHH-HHCHHHHHHHHHHHHhh
Confidence 999 799999999999999999999999999999999999999999999999 78999999999999985
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.8e-47 Score=284.97 Aligned_cols=145 Identities=33% Similarity=0.649 Sum_probs=137.8
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCeEEE----ecCCCcc---eEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEE
Q 031561 1 MQASRARLFKEYKEVQREKSADPDIQLV----CDDSNIF---KWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRF 73 (157)
Q Consensus 1 M~~~~~Rl~~E~~~l~~~~~~~~~~~~~----~~~~n~~---~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f 73 (157)
++.|.+||++||++++ + ++|+++. ++++|++ +|+++|. |++|||+||.|++.|.||++||++||+|+|
T Consensus 27 ~s~a~~RL~kEl~~l~--~--~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f 101 (190)
T 3o2u_A 27 LSAARIRLKRDLDSLD--L--PPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVC 101 (190)
T ss_dssp CCHHHHHHHHHHHTCC--C--CTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEE
T ss_pred ccHHHHHHHHHHHhcc--C--CCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEE
Confidence 4578999999999998 5 7899998 8899999 9999997 788999999999999999999999999999
Q ss_pred eeccccCccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHc
Q 031561 74 LTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAA 152 (157)
Q Consensus 74 ~t~i~HPni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a 152 (157)
.|+||||||+ .+|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++| .+|+++|.++||+|++.+.
T Consensus 102 ~t~i~HPnV~-~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~-~~d~~~f~~~ar~~~~~~~ 178 (190)
T 3o2u_A 102 LKKIFHPNID-LKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLL-CEGEKEFAEAVRLTMSGGS 178 (190)
T ss_dssp CSCCCCTTBC-TTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH-HTCHHHHHHHHHHHHBTCE
T ss_pred ecCcccCCCC-CCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHH-HHCHHHHHHHHHHHHHhcC
Confidence 9999999999 799999999999999999999999999999999999999999999999 8999999999999997653
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=5.8e-45 Score=266.75 Aligned_cols=143 Identities=26% Similarity=0.545 Sum_probs=131.5
Q ss_pred Cc-hHHHHHHHHHHHHHhcC--------C--CCCCeEEEecCCCcceEEEEEECCCCCCCC--CCeEEEEEEeCCCCCCC
Q 031561 1 MQ-ASRARLFKEYKEVQREK--------S--ADPDIQLVCDDSNIFKWTALIKGPSETPYE--GGVFQLAFAVPEQYPLQ 67 (157)
Q Consensus 1 M~-~~~~Rl~~E~~~l~~~~--------~--~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~--gg~f~~~i~fp~~YP~~ 67 (157)
|+ .|.|||++|++++++++ . .+.++.+.++++|+++|+++|.||++|+|+ ||.|++.|.||++||++
T Consensus 5 Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~ 84 (167)
T 4ds2_A 5 MKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHE 84 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCC
Confidence 65 37899999999999975 1 156899999999999999999999999999 99999999999999999
Q ss_pred CCeeEEeeccccCccccCCCeeeccCCCCCCCCCCCHHHHHH-HHHHHhcC--CCCCCCcchhHHHHHHhCCHHHHHHHH
Q 031561 68 PPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCR-AIIALMAH--PEPDSPLNCDSGNLLRSGDIRGFQSMA 144 (157)
Q Consensus 68 pP~v~f~t~i~HPni~~~~G~icl~~l~~~W~p~~~i~~il~-~i~~ll~~--p~~~~~~n~~a~~~~~~~~~~~f~~~a 144 (157)
||+|+|.|+||||||+ .+|.||+++|.++|+|+++++++|. .|++++.. |++++|+|.|||++| .+|+++|+++|
T Consensus 85 pP~v~f~t~i~HPnv~-~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~-~~d~~~f~~~v 162 (167)
T 4ds2_A 85 PPTVRFVTPVYSPLVT-GEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYL-EKFPQDFAARV 162 (167)
T ss_dssp CCEEEESSCCCCSSCC-TTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHH-HHCHHHHHHHH
T ss_pred CCEEEEeCCcccccCC-CCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHH-HHCHHHHHHHH
Confidence 9999999999999999 8999999999999999999999754 67777775 799999999999999 88999999999
Q ss_pred H
Q 031561 145 R 145 (157)
Q Consensus 145 ~ 145 (157)
|
T Consensus 163 r 163 (167)
T 4ds2_A 163 R 163 (167)
T ss_dssp T
T ss_pred h
Confidence 8
No 42
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=5.6e-44 Score=250.20 Aligned_cols=118 Identities=28% Similarity=0.535 Sum_probs=106.2
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeecc-cc
Q 031561 1 MQASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKI-FH 79 (157)
Q Consensus 1 M~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~H 79 (157)
|+.|.+||++|++++++++ ++|+++.++++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++ ||
T Consensus 4 m~~a~~RL~kEl~~l~~~~--~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~H 81 (125)
T 2fo3_A 4 MGNANYRIQKELHNFLNNP--PINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKH 81 (125)
T ss_dssp -----CHHHHHHHHHHHSC--CTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCB
T ss_pred chHHHHHHHHHHHHHHhCC--CCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCC
Confidence 7889999999999999999 89999999999999999999999999999999999999999999999999999997 99
Q ss_pred CccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 031561 80 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121 (157)
Q Consensus 80 Pni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~ 121 (157)
|||+ .+|.||+++|.++|+|+++|++||.+|+++|.+|+.+
T Consensus 82 Pnv~-~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 82 THVY-SNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp TTBC-TTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CcCC-CCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 9998 7999999999999999999999999999999999864
No 43
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=3.9e-43 Score=278.35 Aligned_cols=148 Identities=28% Similarity=0.474 Sum_probs=136.7
Q ss_pred hHHHHHHHHHHHHHhcCCCCC----CeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeec--
Q 031561 3 ASRARLFKEYKEVQREKSADP----DIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTK-- 76 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~----~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~-- 76 (157)
.+.+||++|+++|++++ ++ ++.+.++++|++.|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+
T Consensus 76 ~~~kRL~kEl~~L~k~~--p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g 153 (323)
T 3ceg_A 76 ARARRLAQEAVTLSTSL--PLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGG 153 (323)
T ss_dssp HHHHHHHHHHHHHHHHC--CCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTT
T ss_pred HHHHHHHHHHHHHHhCC--CCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCC
Confidence 47899999999999988 65 45677889999999999999999999999999999999999999999999999
Q ss_pred ---cccCccccCCCeeeccCCC-------CCCCCCC-CHHHHHHHHHHHhc--CCCCCCCcchhH--HHHHHhCCHHHHH
Q 031561 77 ---IFHPNVHFKTGEICLDILK-------NAWSPAW-TLQSVCRAIIALMA--HPEPDSPLNCDS--GNLLRSGDIRGFQ 141 (157)
Q Consensus 77 ---i~HPni~~~~G~icl~~l~-------~~W~p~~-~i~~il~~i~~ll~--~p~~~~~~n~~a--~~~~~~~~~~~f~ 141 (157)
||||||+ .+|.||+++|. ++|+|++ +|.+||.+|++||. +|++++|+|.++ +.++ .+|++.|.
T Consensus 154 ~~~ifHPNV~-~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~-~~d~~~Y~ 231 (323)
T 3ceg_A 154 HSVRFNPNLY-NDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSG-TQSSREYD 231 (323)
T ss_dssp TTCCCBTTBC-TTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHH-HHHHHHHH
T ss_pred CcccccCCCC-cCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhh-hhhHHHHH
Confidence 9999999 89999999997 6899999 89999999999996 667799999987 5677 78999999
Q ss_pred HHHHHHHHHHcCC
Q 031561 142 SMARMYTRLAAMP 154 (157)
Q Consensus 142 ~~a~~~~~k~a~~ 154 (157)
++||+|+++||+.
T Consensus 232 ~~vr~~t~k~A~~ 244 (323)
T 3ceg_A 232 GNIRQATVKWAML 244 (323)
T ss_dssp HHHHHHHHHHTTH
T ss_pred HHHHHHHHHHhhH
Confidence 9999999999974
No 44
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=1.3e-43 Score=256.71 Aligned_cols=128 Identities=23% Similarity=0.430 Sum_probs=118.9
Q ss_pred hHHHHHHHHHHHHHhc-CCCCCCeEEEecC-C--CcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccc
Q 031561 3 ASRARLFKEYKEVQRE-KSADPDIQLVCDD-S--NIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~-~~~~~~~~~~~~~-~--n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 78 (157)
.+.+||++|+++++++ + ++|+++.+.+ + |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||
T Consensus 21 ~~~~RL~kEl~~l~~~~~--~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~ 98 (156)
T 2q0v_A 21 PRSFRLLDELERGQKGNV--SEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIE 98 (156)
T ss_dssp CHHHHHHHHHHHHHCC-C--CTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred hHHHHHHHHHHHHHhCCC--CCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccc
Confidence 5789999999999998 7 8899999743 3 5999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCee---eccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhC
Q 031561 79 HPNVHFKTGEI---CLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSG 135 (157)
Q Consensus 79 HPni~~~~G~i---cl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~ 135 (157)
||||+ .+|.| |+++|. +|+|+++|++||.+|+++|.+|++++++|++||++| .+
T Consensus 99 HPNV~-~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y-~~ 155 (156)
T 2q0v_A 99 MSCVD-NCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVY-SN 155 (156)
T ss_dssp CTTBC-TTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred cCCCc-cCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHh-hh
Confidence 99999 78999 888887 599999999999999999999999999999999998 44
No 45
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=5.8e-43 Score=253.90 Aligned_cols=126 Identities=26% Similarity=0.468 Sum_probs=117.2
Q ss_pred hHHHHHHHHHHHHHhcCCCCCC-eEEEe-cCCC--cceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccc
Q 031561 3 ASRARLFKEYKEVQREKSADPD-IQLVC-DDSN--IFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~-~~~~~-~~~n--~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 78 (157)
.+.+||++|++++++++ ++| +++.+ +++| +++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||
T Consensus 25 p~~~RL~kEl~~l~~~~--~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 102 (160)
T 2a4d_A 25 PRNFRLLEELEEGQKGV--GDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 102 (160)
T ss_dssp HHHHHHHHHHHHHHSCC--TTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred hHHHHHHHHHHHHHhCC--CCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCce
Confidence 47899999999999998 778 78886 4554 899999999999999999999999999999999999999999999
Q ss_pred cCccccCCCeeeccCCC--CCCCCCCCHHHHHHHHHHHhc-CCCCCCCcchhHHH
Q 031561 79 HPNVHFKTGEICLDILK--NAWSPAWTLQSVCRAIIALMA-HPEPDSPLNCDSGN 130 (157)
Q Consensus 79 HPni~~~~G~icl~~l~--~~W~p~~~i~~il~~i~~ll~-~p~~~~~~n~~a~~ 130 (157)
||||+..+|.||+++|. ++|+|+++|++||.+|+++|. .||+++|+|.|||.
T Consensus 103 HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa~ 157 (160)
T 2a4d_A 103 MNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQC 157 (160)
T ss_dssp CTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTCB
T ss_pred eCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhcc
Confidence 99998679999999998 899999999999999999995 69999999999973
No 46
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.2e-42 Score=246.64 Aligned_cols=117 Identities=26% Similarity=0.537 Sum_probs=112.9
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeecc-cc
Q 031561 1 MQASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKI-FH 79 (157)
Q Consensus 1 M~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~H 79 (157)
|+.|.+||++|++++++++ ++|+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++ ||
T Consensus 18 ~~~~~~RL~kEl~~l~~~~--~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~H 95 (136)
T 2h2y_A 18 LGNANYRIQKELNNFLKNP--PINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKH 95 (136)
T ss_dssp TTSHHHHHHHHHHHHHHSC--CTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCC
T ss_pred chHHHHHHHHHHHHHHhCC--CCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCC
Confidence 5678999999999999999 99999999999999999999999999999999999999999999999999999997 99
Q ss_pred CccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 031561 80 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120 (157)
Q Consensus 80 Pni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~ 120 (157)
|||+ .+|.||+++|.++|+|+++|++||.+|+++|.+|+.
T Consensus 96 Pnv~-~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 96 THVY-SNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp TTBC-TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CcCC-CCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 9998 799999999999999999999999999999999974
No 47
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=9.5e-44 Score=252.92 Aligned_cols=129 Identities=26% Similarity=0.463 Sum_probs=115.6
Q ss_pred Cc--hHHHHHHHHHHHHHhc-CCCCCCeEEEecC-C--CcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEe
Q 031561 1 MQ--ASRARLFKEYKEVQRE-KSADPDIQLVCDD-S--NIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFL 74 (157)
Q Consensus 1 M~--~~~~Rl~~E~~~l~~~-~~~~~~~~~~~~~-~--n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~ 74 (157)
|+ .+.+||++|+++++++ + ++|+++.+.+ + |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~--~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 79 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFG--PESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFI 79 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC------CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred cchHHHHHHHHHHHHHHHhcCC--CCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEE
Confidence 66 3679999999999998 7 8899999743 3 489999999999999999999999999999999999999999
Q ss_pred eccccCccccCCCee--eccCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHH
Q 031561 75 TKIFHPNVHFKTGEI--CLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLL 132 (157)
Q Consensus 75 t~i~HPni~~~~G~i--cl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~ 132 (157)
|+||||||+..+|.| |+++|. +|+|+++|++||.+|+++|.+||+++++|++||.+|
T Consensus 80 t~i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 80 SKINLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp BCCCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred cccccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 999999999545999 899886 899999999999999999999999999999998754
No 48
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=252.47 Aligned_cols=125 Identities=26% Similarity=0.474 Sum_probs=116.7
Q ss_pred hHHHHHHHHHHHHHhcCCCCCC-eEEEe-cCCC--cceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccc
Q 031561 3 ASRARLFKEYKEVQREKSADPD-IQLVC-DDSN--IFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~-~~~~~-~~~n--~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 78 (157)
.+.+||++|++++++++ ++| +++.+ +++| +++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||
T Consensus 35 p~~~RL~kEl~~l~~~~--~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 112 (170)
T 2hlw_A 35 PRNFRLLEELEEGQKGV--GDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 112 (170)
T ss_dssp CHHHHHHHHHHHHHHCC--GGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCC
T ss_pred HHHHHHHHHHHHHHhCC--CCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccc
Confidence 37899999999999998 778 67876 4554 899999999999999999999999999999999999999999999
Q ss_pred cCccccCCCeeeccCCC--CCCCCCCCHHHHHHHHHHHhcC-CCCCCCcchhHH
Q 031561 79 HPNVHFKTGEICLDILK--NAWSPAWTLQSVCRAIIALMAH-PEPDSPLNCDSG 129 (157)
Q Consensus 79 HPni~~~~G~icl~~l~--~~W~p~~~i~~il~~i~~ll~~-p~~~~~~n~~a~ 129 (157)
||||+..+|.||+++|. ++|+|+++|++||.+|+++|.+ ||+++|+|.|||
T Consensus 113 HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 113 MNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp CSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred cCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 99998679999999998 8999999999999999999975 899999999987
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.6e-42 Score=241.72 Aligned_cols=113 Identities=39% Similarity=0.721 Sum_probs=107.7
Q ss_pred CchHHHHHHHHHHHHHhcCCCCCCeEEE--ecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccc
Q 031561 1 MQASRARLFKEYKEVQREKSADPDIQLV--CDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (157)
Q Consensus 1 M~~~~~Rl~~E~~~l~~~~~~~~~~~~~--~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 78 (157)
|+.+.+||++|++++++++ ++|+++. ++++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++|
T Consensus 20 Ms~~~~RL~kEl~~l~~~~--~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 97 (136)
T 2a7l_A 20 MASMQKRLQKELLALQNDP--PPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENI 97 (136)
T ss_dssp GTTSCHHHHHHHHHHHHSC--CTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCC
T ss_pred ccHHHHHHHHHHHHHHhCC--CCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCc
Confidence 6666699999999999999 9999965 88899999999999999999999999999999999999999999999999
Q ss_pred --cCccccCCCeeeccCCCCCCCCCCCHHHHHHHHHHHhc
Q 031561 79 --HPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMA 116 (157)
Q Consensus 79 --HPni~~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~ 116 (157)
||||+ .+|.||+++|.++|+|+++|++||.+|+++|.
T Consensus 98 ~~HPNV~-~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 98 PVHPHVY-SNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CCBTTBC-TTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCccCC-CCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 99999 79999999999999999999999999999974
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-38 Score=236.52 Aligned_cols=116 Identities=27% Similarity=0.669 Sum_probs=104.4
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCcc
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 82 (157)
.+.+||++|+++|++++ ++||++.+.++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.|+ |||+
T Consensus 14 ~a~~RL~kEl~~l~~~~--~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~ 89 (187)
T 2f4w_A 14 TATQRLKQDYLRIKKDP--VPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRF 89 (187)
T ss_dssp CHHHHHHHHHHHHHHSC--CTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Ccee
Confidence 47799999999999999 9999999999999999999999999999999999999999999999999999999 9999
Q ss_pred ccCCCeeeccCC---CCCCCCCCCHHHHHHHHHHHhcCCCCCCC
Q 031561 83 HFKTGEICLDIL---KNAWSPAWTLQSVCRAIIALMAHPEPDSP 123 (157)
Q Consensus 83 ~~~~G~icl~~l---~~~W~p~~~i~~il~~i~~ll~~p~~~~~ 123 (157)
+ .+|.||+++| .++|+|+++|.+||.+|+++|.+|+++..
T Consensus 90 ~-~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g 132 (187)
T 2f4w_A 90 K-CNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLG 132 (187)
T ss_dssp C-TTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTT
T ss_pred c-cCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCc
Confidence 8 7999999999 58999999999999999999999998643
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=6.4e-40 Score=243.42 Aligned_cols=142 Identities=18% Similarity=0.404 Sum_probs=123.3
Q ss_pred Cc-hHHHHHHHHHHHHHhcCCC-CCCeEEEecCCCcceEEEEEECC-CCCCCCC-----------CeEEEEEEeCCCCCC
Q 031561 1 MQ-ASRARLFKEYKEVQREKSA-DPDIQLVCDDSNIFKWTALIKGP-SETPYEG-----------GVFQLAFAVPEQYPL 66 (157)
Q Consensus 1 M~-~~~~Rl~~E~~~l~~~~~~-~~~~~~~~~~~n~~~w~~~i~gp-~~t~y~g-----------g~f~~~i~fp~~YP~ 66 (157)
|+ .|.+||++||++|++++.. +.++++.+.++|+++|+++|.|| ++|+|+| |.|+++|.||++||+
T Consensus 24 ~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~ 103 (186)
T 1zuo_A 24 GSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPF 103 (186)
T ss_dssp CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCC
Confidence 44 4789999999999987610 36799999999999999999998 9999998 899999999999999
Q ss_pred CCCeeEEeeccccC-ccccCCCeeeccCCC-CCCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHH
Q 031561 67 QPPQVRFLTKIFHP-NVHFKTGEICLDILK-NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMA 144 (157)
Q Consensus 67 ~pP~v~f~t~i~HP-ni~~~~G~icl~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a 144 (157)
+||+|+|.|++||| ||+ .+|.||+++|. ++|+|+++|++||.+|+++|.+|+++. .+ ..+..+|.+.+
T Consensus 104 ~PP~V~f~tpi~hPnnV~-~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~-~~~~~~Y~~~~ 173 (186)
T 1zuo_A 104 DPPFVRVVLPVLSGGYVL-GGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QF-GANKNQYNLAR 173 (186)
T ss_dssp SCCEEEEEESCEESTTBC-GGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CT-TCCTTCCCHHH
T ss_pred CCCeEEEeCCccCCCccC-CCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hh-ccCHHHHhHHH
Confidence 99999999999999 698 89999999997 789999999999999999999986533 23 44567777777
Q ss_pred HHHHHHHc
Q 031561 145 RMYTRLAA 152 (157)
Q Consensus 145 ~~~~~k~a 152 (157)
++.+.+.+
T Consensus 174 ~~~~~~~~ 181 (186)
T 1zuo_A 174 AQQSYNSI 181 (186)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776654
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.94 E-value=1.1e-28 Score=177.14 Aligned_cols=111 Identities=21% Similarity=0.308 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCC----------eEEEEEEeCCCCCCCCCeeEEe
Q 031561 5 RARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGG----------VFQLAFAVPEQYPLQPPQVRFL 74 (157)
Q Consensus 5 ~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg----------~f~~~i~fp~~YP~~pP~v~f~ 74 (157)
.+||++|++.|++. +.+..+|++.|.+.+.||+||+|+|| .|.++|.||.+||++||+|+|.
T Consensus 34 ~~RL~eE~k~L~k~--------v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~ 105 (172)
T 2z6o_A 34 VQRLKEEYQSLIRY--------VENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVP 105 (172)
T ss_dssp HHHHHHHHHHHHHH--------HHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHH--------hccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeC
Confidence 89999999999984 35667899999999999999999999 9999999999999999999999
Q ss_pred ec-cccCccccCCCeeeccCCC-C---CCCCCCCHHHHHHHHHHHhcCCCCCCCcchhHHHHH
Q 031561 75 TK-IFHPNVHFKTGEICLDILK-N---AWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLL 132 (157)
Q Consensus 75 t~-i~HPni~~~~G~icl~~l~-~---~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~ 132 (157)
+. +|||||+ .+|+||+|+|. . .|+|+++|.++|.- ....++..|+..+.
T Consensus 106 ~~~~~hpnmY-~~G~ICLdIL~kp~Ws~~~P~~~IahiL~l--------gl~pwla~eip~lv 159 (172)
T 2z6o_A 106 ELDGKTAKMY-RGGKICLTDHFKPLWARNVPKFGLAHLMAL--------GLGPWLAVEIPDLI 159 (172)
T ss_dssp GGTTTCSSBC-TTSBBCCCTTHHHHHHHHTTSCCHHHHHHH--------THHHHHHHHHHHHH
T ss_pred CCCCCCCCCC-CCCcEechhhccccccccCCccCHHHHHhh--------ccCchhhhhhHHHH
Confidence 98 9999998 89999999995 3 46699999999843 23445555666555
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.84 E-value=7.1e-21 Score=137.56 Aligned_cols=115 Identities=23% Similarity=0.406 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHhcC-CCCCCeEEEecCCCcceEEEEEECCCCCCCCCCe---EEEEEEeCCCCCCCCCeeEEeec-----
Q 031561 6 ARLFKEYKEVQREK-SADPDIQLVCDDSNIFKWTALIKGPSETPYEGGV---FQLAFAVPEQYPLQPPQVRFLTK----- 76 (157)
Q Consensus 6 ~Rl~~E~~~l~~~~-~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~---f~~~i~fp~~YP~~pP~v~f~t~----- 76 (157)
+|..+|...+.+.- ...+...+...+|...++-+.+.|.-.++|+|+. |.+.|.||.+||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 67778888886643 1122233345667777777778887779999999 88999999999999999988651
Q ss_pred -----cc-cCccccCCCeeeccCCCCCCCC-CCCHHHHHHHHHHHhcCCCCCC
Q 031561 77 -----IF-HPNVHFKTGEICLDILKNAWSP-AWTLQSVCRAIIALMAHPEPDS 122 (157)
Q Consensus 77 -----i~-HPni~~~~G~icl~~l~~~W~p-~~~i~~il~~i~~ll~~p~~~~ 122 (157)
|+ ||||| .+|+||+++|. +|+| +.+|.++|.+|+++|.+|+++.
T Consensus 111 ~~~~~I~~hpnVD-~~G~I~lpyL~-~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 111 TISSSLPIQEYID-SNGWIALPILH-AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TSCTTSTHHHHBC-TTSBBCCGGGG-SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred ccccccCCCCCCC-CCCcEeCcccc-cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 99999 89999999995 6999 6899999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.74 E-value=2.1e-19 Score=126.44 Aligned_cols=92 Identities=24% Similarity=0.452 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCC----------eEEEEEEeCCCCCCCCCeeEEe
Q 031561 5 RARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGG----------VFQLAFAVPEQYPLQPPQVRFL 74 (157)
Q Consensus 5 ~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg----------~f~~~i~fp~~YP~~pP~v~f~ 74 (157)
..||..||..|-+.. +...++-..|...+.|++||+|.|+ .|.+++.||.+||..||.|+|.
T Consensus 36 ~~RlkeEy~alI~yv--------~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp 107 (168)
T 3kpa_A 36 TARLKEEYASLITYV--------EHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALP 107 (168)
T ss_dssp HHHHHHHHHHHHHHH--------HHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHHH--------HhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecc
Confidence 489999999986544 1122445679999999999999999 9999999999999999999999
Q ss_pred ec-cccCccccCCCeeeccCCCCCCCCC-------CCHHHHH
Q 031561 75 TK-IFHPNVHFKTGEICLDILKNAWSPA-------WTLQSVC 108 (157)
Q Consensus 75 t~-i~HPni~~~~G~icl~~l~~~W~p~-------~~i~~il 108 (157)
+. .+|||++ .+|+||++++ |+|. ++|...|
T Consensus 108 ~ldgkt~kmY-r~GkICLdIh---wkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 108 ELEGKTVKMY-RGGKICMTTH---FFPLWARNVPYFGISHVL 145 (168)
T ss_dssp GGTTTCSSEE-TTTEECCCTT---HHHHHHHTTTTCCHHHHH
T ss_pred cccCcCcccc-CCCcEEeccc---cchhhHhcCCchhHHHHH
Confidence 95 8999998 8999999997 7664 5555544
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.56 E-value=5.5e-15 Score=105.00 Aligned_cols=102 Identities=22% Similarity=0.428 Sum_probs=80.6
Q ss_pred HHHHHHHHHHhcCCCCCCeEEE--e---cCCCcceEEEEEECCCCCCCCCCeEEE--EEEeCCCCCCCCCeeEEeec---
Q 031561 7 RLFKEYKEVQREKSADPDIQLV--C---DDSNIFKWTALIKGPSETPYEGGVFQL--AFAVPEQYPLQPPQVRFLTK--- 76 (157)
Q Consensus 7 Rl~~E~~~l~~~~~~~~~~~~~--~---~~~n~~~w~~~i~gp~~t~y~gg~f~~--~i~fp~~YP~~pP~v~f~t~--- 76 (157)
+..+|...+.+.- ++++.. . ...+++.|.++|. .+|+|+.|.+ .|.||.+||++||.| |.++
T Consensus 24 ~t~~dv~~vl~~y---p~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~ 95 (146)
T 3obq_A 24 LTVRETVNVITLY---KDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSS 95 (146)
T ss_dssp HHHHHHHHHHHHC---TTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTT
T ss_pred hhHHHHHHHHHhC---CCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCC
Confidence 3456777665544 233222 1 2357899999997 5799999985 999999999999999 7766
Q ss_pred ---cccCccccCCCeeeccCCCCCCCC-CCCHHHHHHHHHHHhcCC
Q 031561 77 ---IFHPNVHFKTGEICLDILKNAWSP-AWTLQSVCRAIIALMAHP 118 (157)
Q Consensus 77 ---i~HPni~~~~G~icl~~l~~~W~p-~~~i~~il~~i~~ll~~p 118 (157)
..||||| .+|+||++.|.+ |++ ..+|.+++..+++.|.+.
T Consensus 96 m~I~~~~~Vd-~~G~i~lpyL~~-W~~~~snL~~ll~~l~~~F~~e 139 (146)
T 3obq_A 96 MTIKTGKHVD-ANGKIYLPYLHE-WKHPQSDLLGLIQVMIVVFGDE 139 (146)
T ss_dssp EEECCBTTBC-TTCBBCCHHHHT-CCTTTCCHHHHHHHHHHHHHHS
T ss_pred CEECCCCCCC-CCCCEecccccc-cCCCCCCHHHHHHHHHHHHhhC
Confidence 4899999 899999999965 988 899999999999988753
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.10 E-value=0.0043 Score=42.15 Aligned_cols=69 Identities=14% Similarity=0.177 Sum_probs=46.0
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEee
Q 031561 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLT 75 (157)
Q Consensus 3 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 75 (157)
-...+...|+..|..-- ...+.+. .+....+.+.|..-.+..-..-.+.+.|.||.+||.+||.+.+.+
T Consensus 10 ~~~e~q~~EleaL~sIy--~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 10 DYGEEQRNELEALESIY--PDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CHHHHHHHHHHHHHHHC--SSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred ChHHHHHHHHHHHHHHc--cCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 34566778999998776 5555543 222456666665322222233478999999999999999998765
No 57
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=96.63 E-value=0.024 Score=41.32 Aligned_cols=85 Identities=19% Similarity=0.290 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEeeccccCccccCC
Q 031561 7 RLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKT 86 (157)
Q Consensus 7 Rl~~E~~~l~~~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~ 86 (157)
+|.+|+.++-=+. +.-.+.++....+.+.... |..+.++|.++.+||.++|.+...-|. ..+
T Consensus 5 ~li~Ei~~iGW~~-------l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~-~~~----- 66 (186)
T 3zqs_A 5 SLIEEIGTLGWDK-------LVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV-PFC----- 66 (186)
T ss_dssp SHHHHHHHHCGGG-------EEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS-CCC-----
T ss_pred HHHHHHHHhCCce-------eeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC-Ccc-----
Confidence 5777888773333 3333567888888888543 678999999999999999977654433 112
Q ss_pred CeeeccCCCCCCCCCCCHHHHHHHHHHHhcCC
Q 031561 87 GEICLDILKNAWSPAWTLQSVCRAIIALMAHP 118 (157)
Q Consensus 87 G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p 118 (157)
-.|+|..++.+++...+..+.+-
T Consensus 67 ---------~~w~~~ssL~~v~~qF~~~Le~l 89 (186)
T 3zqs_A 67 ---------ASWTPQSSLISIYSQFLAAIESL 89 (186)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHHHHHT
T ss_pred ---------cccCCCccHHHHHHHHHHHHHHH
Confidence 25999999999998877776543
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.38 E-value=0.027 Score=38.65 Aligned_cols=67 Identities=13% Similarity=0.222 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhcCCCCCCeEEEecC------CCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEee
Q 031561 6 ARLFKEYKEVQREKSADPDIQLVCDD------SNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLT 75 (157)
Q Consensus 6 ~Rl~~E~~~l~~~~~~~~~~~~~~~~------~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 75 (157)
.+...|+..|..-- ...+...... +....+.+.|.+..+ .-..-.+.+.+.+|.+||..||.|.+.+
T Consensus 13 e~q~~EleaL~SIY--~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 13 EIQCNELEAIRSIY--MDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHTTS--SSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHHC--hhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 45567888887655 3344332111 124567777773222 1123478899999999999999998865
No 59
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.37 E-value=0.049 Score=36.80 Aligned_cols=68 Identities=16% Similarity=0.240 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhcCCCCCCeEEEecC--CCcceEEEEEECCCCCCC--CCCeEEEEEEeCCCCCCCCCeeEEee
Q 031561 6 ARLFKEYKEVQREKSADPDIQLVCDD--SNIFKWTALIKGPSETPY--EGGVFQLAFAVPEQYPLQPPQVRFLT 75 (157)
Q Consensus 6 ~Rl~~E~~~l~~~~~~~~~~~~~~~~--~n~~~w~~~i~gp~~t~y--~gg~f~~~i~fp~~YP~~pP~v~f~t 75 (157)
.+...|+..|+.-- ...+.+.... .....+.+.+..+.+..- ..-.+.+.|.||.+||..+|.|...+
T Consensus 11 e~~~~EleaL~SIY--~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 11 WVLPSEVEVLESIY--LDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CHHHHHHHHHHHHS--TTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHC--CCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 35678898888776 5566554222 234455566653222111 12468899999999999999998876
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=95.34 E-value=0.14 Score=34.80 Aligned_cols=68 Identities=16% Similarity=0.167 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEecCC-----CcceEEEEEECCCC-C-CCCCCeEEEEEEeCCCCCCCCCeeEEee
Q 031561 5 RARLFKEYKEVQREKSADPDIQLVCDDS-----NIFKWTALIKGPSE-T-PYEGGVFQLAFAVPEQYPLQPPQVRFLT 75 (157)
Q Consensus 5 ~~Rl~~E~~~l~~~~~~~~~~~~~~~~~-----n~~~w~~~i~gp~~-t-~y~gg~f~~~i~fp~~YP~~pP~v~f~t 75 (157)
..+...|+..|+.-- ...+....... ....+.+.+. +.+ . .-..-.+.+.|.||.+||.++|.|.+.+
T Consensus 12 ~e~q~~EleaL~SIY--~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 12 SQRQDHELQALEAIY--GSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHT--SSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHHC--cccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 456678898888766 44555432111 1345666665 221 1 0012468999999999999999998754
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.81 E-value=0.062 Score=36.34 Aligned_cols=67 Identities=12% Similarity=0.126 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhcCCCCCCeEEE-ecCCCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEe
Q 031561 7 RLFKEYKEVQREKSADPDIQLV-CDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFL 74 (157)
Q Consensus 7 Rl~~E~~~l~~~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~ 74 (157)
+...|+..|+.--..+..+.+. ....+...+.+.+.... ..-..-.+.+.|.+|.+||..||.|...
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~-~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEG-FMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCT-TTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCC-CCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 4566887776644101134332 11223457777776322 1111247899999999999999988754
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.83 E-value=0.23 Score=34.75 Aligned_cols=67 Identities=12% Similarity=0.080 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEec--------------CCCc--ceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCC
Q 031561 5 RARLFKEYKEVQREKSADPDIQLVCD--------------DSNI--FKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQP 68 (157)
Q Consensus 5 ~~Rl~~E~~~l~~~~~~~~~~~~~~~--------------~~n~--~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~p 68 (157)
..+-..|+..|..--..+.-+.+.-. .+-. ..+.+.+.- .+. ...+.++|.+|.+||..+
T Consensus 16 ~e~Q~eElEaL~SIY~~~de~~v~d~~~~~~l~~~~~~~~~~~p~~~~~~i~l~~-~~~---~~~i~L~v~lP~~YP~~~ 91 (154)
T 2daw_A 16 LQLQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQI-EEP---KVKIDLQVTMPHSYPYLA 91 (154)
T ss_dssp HHHHHHHHHHHHHHCCSTTSEEESCGGGTHHHHHHHHTSCCSCCCCEEEEEEEEE-TTT---TEEEEEEEEECSSTTSSC
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeccchHHHHHHhhcccccCCCCceEEEEEEec-CCC---CceEEEEEEcCCCCCCCC
Confidence 34556688888776521245655310 0101 345544442 111 137999999999999999
Q ss_pred CeeEEee
Q 031561 69 PQVRFLT 75 (157)
Q Consensus 69 P~v~f~t 75 (157)
|.|...+
T Consensus 92 P~i~l~~ 98 (154)
T 2daw_A 92 LQLFGRS 98 (154)
T ss_dssp CEEEEEC
T ss_pred CcEEEEe
Confidence 9998765
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.66 E-value=0.52 Score=32.70 Aligned_cols=23 Identities=30% Similarity=0.618 Sum_probs=20.7
Q ss_pred eEEEEEEeCCCCCCCCCeeEEee
Q 031561 53 VFQLAFAVPEQYPLQPPQVRFLT 75 (157)
Q Consensus 53 ~f~~~i~fp~~YP~~pP~v~f~t 75 (157)
.+.+.|.+|.+||..||.|...+
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEEC
T ss_pred eEEEEEECCCCCCCCCCeEEEEc
Confidence 68899999999999999998765
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=84.05 E-value=0.2 Score=33.19 Aligned_cols=35 Identities=6% Similarity=0.003 Sum_probs=0.0
Q ss_pred CCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcCC
Q 031561 119 EPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAMP 154 (157)
Q Consensus 119 ~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~~ 154 (157)
....|.+.+.|++| .++++.|...||.|+.-+|.+
T Consensus 22 ~~~~PQDA~VA~qy-~~~~~~f~~TAr~WT~~~a~~ 56 (108)
T 2cwb_A 22 TTTEAVDAATAEKV-FKQYANDNGVDGEWTYDDATK 56 (108)
T ss_dssp ------------------------------------
T ss_pred ccCCchhHHHHHHH-HhchhccccccccccccCcCC
Confidence 34678999999999 899999999999999666643
No 65
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=65.90 E-value=4.2 Score=19.00 Aligned_cols=20 Identities=25% Similarity=0.273 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCe
Q 031561 4 SRARLFKEYKEVQREKSADPDI 25 (157)
Q Consensus 4 ~~~Rl~~E~~~l~~~~~~~~~~ 25 (157)
-+.||.-|+..++.++ +.|.
T Consensus 6 eldrlllelnavqhnp--psg~ 25 (26)
T 3u3c_B 6 ELDRLLLELNAVQHNP--PSGX 25 (26)
T ss_pred HHHHHHHHHhhhccCC--CCCC
Confidence 3679999999999999 7663
No 66
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=46.42 E-value=20 Score=26.25 Aligned_cols=26 Identities=19% Similarity=0.427 Sum_probs=22.8
Q ss_pred CCCeEEEEEEeCCCCCC-----CCCeeEEee
Q 031561 50 EGGVFQLAFAVPEQYPL-----QPPQVRFLT 75 (157)
Q Consensus 50 ~gg~f~~~i~fp~~YP~-----~pP~v~f~t 75 (157)
+.|.|.|+-.+|--||. .||+|.|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 46889999999999998 899999864
No 67
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=38.70 E-value=15 Score=19.40 Aligned_cols=16 Identities=19% Similarity=0.380 Sum_probs=12.6
Q ss_pred CchHHHHHHHHHHHHH
Q 031561 1 MQASRARLFKEYKEVQ 16 (157)
Q Consensus 1 M~~~~~Rl~~E~~~l~ 16 (157)
|-.-.+||..|++.+.
T Consensus 26 Mv~~~~~~~~~~~~~~ 41 (42)
T 3g9r_A 26 LKSKIKRIENEIKRIK 41 (42)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 4456799999999875
No 68
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=28.47 E-value=37 Score=24.59 Aligned_cols=24 Identities=17% Similarity=0.250 Sum_probs=21.5
Q ss_pred CeEEEEEEeCCCCCCC-----CCeeEEee
Q 031561 52 GVFQLAFAVPEQYPLQ-----PPQVRFLT 75 (157)
Q Consensus 52 g~f~~~i~fp~~YP~~-----pP~v~f~t 75 (157)
|.|.|+=.+|--||.. ||+|.|.-
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~V 130 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINISL 130 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEEE
Confidence 8899999999999987 89998863
No 69
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=27.56 E-value=54 Score=19.92 Aligned_cols=42 Identities=17% Similarity=0.146 Sum_probs=31.7
Q ss_pred HHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHcC
Q 031561 111 IIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAAM 153 (157)
Q Consensus 111 i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a~ 153 (157)
|+.|+..-++...+++++-.++ .+=.+.|...+-..+++.|.
T Consensus 11 L~~Lv~~idp~~~ld~~vee~l-l~lADdFV~~V~~~ac~lAK 52 (76)
T 1h3o_B 11 LQDLVREVDPNEQLDEDVEEML-LQIADDFIESVVTAACQLAR 52 (76)
T ss_dssp HHHHHHHHCSSCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 4444444466778888888888 67788999999888888775
No 70
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=27.52 E-value=33 Score=25.60 Aligned_cols=25 Identities=20% Similarity=0.438 Sum_probs=22.0
Q ss_pred CCeEEEEEEeCCCCCC-------CCCeeEEee
Q 031561 51 GGVFQLAFAVPEQYPL-------QPPQVRFLT 75 (157)
Q Consensus 51 gg~f~~~i~fp~~YP~-------~pP~v~f~t 75 (157)
.|.|.|+=.+|--||. .||+|.|.-
T Consensus 134 ~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~V 165 (238)
T 3t63_M 134 DGYYSFRTIKPGPAPWRNGPNDWRPAHIYFGI 165 (238)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CceEEEEEECCcCccCCCCCCCCcCCeEEEEE
Confidence 5899999999999986 799999863
No 71
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=27.21 E-value=1.1e+02 Score=25.66 Aligned_cols=26 Identities=8% Similarity=0.056 Sum_probs=20.1
Q ss_pred hhHHHHHHhCCHHHHHHHHHHHHHHHc
Q 031561 126 CDSGNLLRSGDIRGFQSMARMYTRLAA 152 (157)
Q Consensus 126 ~~a~~~~~~~~~~~f~~~a~~~~~k~a 152 (157)
.|+.++. .+|++.|.+.|++..+++.
T Consensus 278 ee~~~l~-~~dp~~~~~~~~~Sm~rhv 303 (552)
T 2fkn_A 278 DEADRLR-QDTPELYVRLAKQSMKKHV 303 (552)
T ss_dssp HHHHHHH-HHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhCHHHHHHHHHHHHHHHH
Confidence 3455555 8899999999999877764
No 72
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=26.83 E-value=35 Score=25.52 Aligned_cols=26 Identities=23% Similarity=0.617 Sum_probs=22.2
Q ss_pred CCCeEEEEEEeCCCCC-------CCCCeeEEee
Q 031561 50 EGGVFQLAFAVPEQYP-------LQPPQVRFLT 75 (157)
Q Consensus 50 ~gg~f~~~i~fp~~YP-------~~pP~v~f~t 75 (157)
+.|.|.|+-.+|--|| ..||+|.|.-
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~V 166 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFSL 166 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEEE
Confidence 3589999999999998 4799999864
No 73
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=26.70 E-value=1.1e+02 Score=25.56 Aligned_cols=26 Identities=12% Similarity=0.123 Sum_probs=20.1
Q ss_pred hhHHHHHHhCCHHHHHHHHHHHHHHHc
Q 031561 126 CDSGNLLRSGDIRGFQSMARMYTRLAA 152 (157)
Q Consensus 126 ~~a~~~~~~~~~~~f~~~a~~~~~k~a 152 (157)
.|+.++. .+|++.|.+.|++..+++.
T Consensus 277 ee~~~l~-~~dp~~~~~~~~~Sm~rhv 302 (551)
T 1x87_A 277 DEAAELR-ARDPKQYIARAKQSIAAHV 302 (551)
T ss_dssp HHHHHHH-HHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhCHHHHHHHHHHHHHHHH
Confidence 3455555 8899999999999877764
No 74
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=26.63 E-value=1.7e+02 Score=20.65 Aligned_cols=42 Identities=19% Similarity=0.441 Sum_probs=29.3
Q ss_pred CCcceEEEEEECCCCCCCCCCeEEEEEEeCCCCCCCCCeeEEee
Q 031561 32 SNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLT 75 (157)
Q Consensus 32 ~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 75 (157)
+.-.+|.+.+.|+.+.-...-+=++...+.+.||. |.-.+..
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~ 71 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEA 71 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeC
Confidence 45678999999987654434466788889999974 5555443
No 75
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=26.40 E-value=1.1e+02 Score=25.53 Aligned_cols=51 Identities=14% Similarity=0.214 Sum_probs=33.5
Q ss_pred ccCccccCCCeeeccCCCCCCCC-CCCHHHHHHHHHHHhcCCCCCCCcchhHHHHHHhCCHHHHHHHHHHHHHHHc
Q 031561 78 FHPNVHFKTGEICLDILKNAWSP-AWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAA 152 (157)
Q Consensus 78 ~HPni~~~~G~icl~~l~~~W~p-~~~i~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~~f~~~a~~~~~k~a 152 (157)
.+|.+. .+...|+|.+. ++-| .+|+ .|+.++. .+|++.|.+.|++..+++.
T Consensus 256 i~~Dlv-tDQTSaHdp~~-GY~P~g~t~---------------------ee~~~l~-~~dp~~~~~~~~~Sm~rhv 307 (557)
T 1uwk_A 256 VRPDMV-TDQTSAHDPLN-GYLPAGWTW---------------------EQYRDRA-QTEPAAVVKAAKQSMAVHV 307 (557)
T ss_dssp CCCSEE-CCCSCTTCTTT-SCCCTTCCH---------------------HHHHHHH-HHCHHHHHHHHHHHHHHHH
T ss_pred CCCCCC-CCCccccCccc-ccCCCCCCH---------------------HHHHHHH-HhCHHHHHHHHHHHHHHHH
Confidence 345554 55666666665 5555 2343 3455555 8899999999999877764
No 76
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=26.18 E-value=36 Score=26.48 Aligned_cols=25 Identities=20% Similarity=0.483 Sum_probs=21.3
Q ss_pred CCeEEEEEEeCCCCC------------------CCCCeeEEee
Q 031561 51 GGVFQLAFAVPEQYP------------------LQPPQVRFLT 75 (157)
Q Consensus 51 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 75 (157)
.|.|.|.-.+|.-|| ..||.|.|.-
T Consensus 188 ~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~V 230 (312)
T 2xsu_A 188 NGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYFV 230 (312)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEEE
T ss_pred CceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEEE
Confidence 488999999999998 5699998863
No 77
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=25.76 E-value=37 Score=26.41 Aligned_cols=24 Identities=29% Similarity=0.603 Sum_probs=21.0
Q ss_pred CCeEEEEEEeCCCCC------------------CCCCeeEEe
Q 031561 51 GGVFQLAFAVPEQYP------------------LQPPQVRFL 74 (157)
Q Consensus 51 gg~f~~~i~fp~~YP------------------~~pP~v~f~ 74 (157)
.|.|.|.-.+|--|| ..||+|.|.
T Consensus 184 ~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 184 EGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 488999999999998 469999985
No 78
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=24.96 E-value=39 Score=26.01 Aligned_cols=26 Identities=19% Similarity=0.567 Sum_probs=21.8
Q ss_pred CCCeEEEEEEeCCCCC------------------CCCCeeEEee
Q 031561 50 EGGVFQLAFAVPEQYP------------------LQPPQVRFLT 75 (157)
Q Consensus 50 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~t 75 (157)
+.|.|.|+=.+|.-|| ..||+|.|.-
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~V 226 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFMV 226 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEEE
Confidence 4588999999999998 4599998863
No 79
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=24.27 E-value=41 Score=25.85 Aligned_cols=24 Identities=33% Similarity=0.863 Sum_probs=21.0
Q ss_pred CCeEEEEEEeCCCCCC------------------CCCeeEEe
Q 031561 51 GGVFQLAFAVPEQYPL------------------QPPQVRFL 74 (157)
Q Consensus 51 gg~f~~~i~fp~~YP~------------------~pP~v~f~ 74 (157)
.|.|.|+=.+|--||. .||+|.|.
T Consensus 181 ~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 222 (290)
T 3n9t_A 181 DGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFM 222 (290)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEE
Confidence 4899999999999993 69999886
No 80
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=24.19 E-value=96 Score=22.16 Aligned_cols=56 Identities=18% Similarity=0.264 Sum_probs=35.5
Q ss_pred CCeEEEEEEeCCCCCCCCCeeEEeecc--ccCccccCCCeeeccCCCCCCCCCCCHHHHHHHHH
Q 031561 51 GGVFQLAFAVPEQYPLQPPQVRFLTKI--FHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAII 112 (157)
Q Consensus 51 gg~f~~~i~fp~~YP~~pP~v~f~t~i--~HPni~~~~G~icl~~l~~~W~p~~~i~~il~~i~ 112 (157)
|....+.|.+.+..|...|.++|..+- -+|.-. +++---..|.+..++.+=|..|-
T Consensus 123 g~~vsl~i~vdP~~P~~lPe~~FlG~~~~v~~lr~------~~~~nl~~Wd~~~~i~~NL~~il 180 (186)
T 3zqs_A 123 GNNVSINIEVDPRHPTMLPECFFLGADHVVKPLGI------KLSRNIHLWDPENSVLQNLKDVL 180 (186)
T ss_dssp ETTEEEEEECCTTSTTSCCEEEEEECHHHHHHHHH------HHHHHGGGCCTTSCHHHHHHHHH
T ss_pred CCCcEEEEEECCCCCCcCCceEEECChHHHHHHHH------HHhhhHhhcCCCCCHHHHHHHHH
Confidence 345778999999999999999998641 111000 00000036999988776665553
No 81
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=23.63 E-value=65 Score=14.86 Aligned_cols=12 Identities=33% Similarity=0.440 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHH
Q 031561 5 RARLFKEYKEVQ 16 (157)
Q Consensus 5 ~~Rl~~E~~~l~ 16 (157)
.++|++|+++-+
T Consensus 10 qkkirkelkqrq 21 (26)
T 1m46_B 10 QKKIRKELKQRQ 21 (26)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 578899988754
No 82
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=23.49 E-value=44 Score=25.14 Aligned_cols=25 Identities=28% Similarity=0.648 Sum_probs=20.9
Q ss_pred CCeEEEEEEeCCCCC------------------CCCCeeEEee
Q 031561 51 GGVFQLAFAVPEQYP------------------LQPPQVRFLT 75 (157)
Q Consensus 51 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 75 (157)
.|.|.|.-.+|..|| ..||+|.|.-
T Consensus 154 ~G~y~F~TI~Pg~Y~~p~dGp~G~ll~~~grh~~RpaHIH~~V 196 (254)
T 2boy_A 154 NGRFTLRTIVPAPYEIPKNGPTGALLAAAGWHAWRPAHLHWII 196 (254)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEEE
T ss_pred CceEEEEEECCccccCCCCCcHHHHHHhcccccCCCceEEEEE
Confidence 488999999999887 4689998863
No 83
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=22.41 E-value=46 Score=25.86 Aligned_cols=24 Identities=17% Similarity=0.602 Sum_probs=20.9
Q ss_pred CCeEEEEEEeCCCCC------------------CCCCeeEEe
Q 031561 51 GGVFQLAFAVPEQYP------------------LQPPQVRFL 74 (157)
Q Consensus 51 gg~f~~~i~fp~~YP------------------~~pP~v~f~ 74 (157)
.|.|.|+-.+|.-|| ..||+|.|.
T Consensus 187 ~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~~grh~~RpaHIHf~ 228 (311)
T 1dmh_A 187 NGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYF 228 (311)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECSEEEEE
T ss_pred CceEEEEEEcCCcccCCCCCcHHHHHHhcccCCCCCceEEEE
Confidence 488999999999997 469999986
No 84
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=22.39 E-value=44 Score=25.59 Aligned_cols=24 Identities=17% Similarity=0.578 Sum_probs=20.4
Q ss_pred CCeEEEEEEeCCCCC------------------CCCCeeEEe
Q 031561 51 GGVFQLAFAVPEQYP------------------LQPPQVRFL 74 (157)
Q Consensus 51 gg~f~~~i~fp~~YP------------------~~pP~v~f~ 74 (157)
.|.|.|+=.+|..|| ..||+|.|.
T Consensus 183 dG~y~F~TI~Pg~Yp~p~dGp~G~lL~~~grh~~RpaHIH~~ 224 (280)
T 3hhy_A 183 EGRYEITTIQPAPYQIPTDGPTGQFIEAQNGHPWRPAHLHLI 224 (280)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECSCEEEE
T ss_pred CceEEEEEECCcCcCCCCCCcHHHHHHhcCCCCCCCcEEEEE
Confidence 488999999998887 468999886
Done!