Query 031562
Match_columns 157
No_of_seqs 127 out of 1250
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 15:52:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031562.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031562hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 99.9 2.6E-24 5.6E-29 161.6 12.8 118 31-150 25-142 (489)
2 PLN02687 flavonoid 3'-monooxyg 99.9 9E-23 1.9E-27 155.6 10.3 123 28-154 30-152 (517)
3 PLN00168 Cytochrome P450; Prov 99.9 4.9E-22 1.1E-26 151.6 10.6 121 31-154 34-156 (519)
4 PTZ00404 cytochrome P450; Prov 99.9 1.6E-21 3.5E-26 147.6 10.1 118 30-154 27-144 (482)
5 PLN02394 trans-cinnamate 4-mon 99.8 1.2E-20 2.5E-25 143.6 11.9 122 30-154 28-149 (503)
6 PLN02971 tryptophan N-hydroxyl 99.8 1.2E-20 2.7E-25 144.6 11.3 121 31-153 56-177 (543)
7 PLN03112 cytochrome P450 famil 99.8 1.3E-20 2.7E-25 143.8 11.3 123 28-154 28-150 (514)
8 PLN00110 flavonoid 3',5'-hydro 99.8 2.6E-20 5.7E-25 141.7 12.4 138 11-153 11-148 (504)
9 PLN02183 ferulate 5-hydroxylas 99.8 1.1E-20 2.3E-25 144.2 9.6 117 31-153 35-153 (516)
10 PLN03234 cytochrome P450 83B1; 99.8 2E-20 4.3E-25 142.2 10.7 121 31-154 27-147 (499)
11 PLN02196 abscisic acid 8'-hydr 99.8 2.7E-20 5.8E-25 140.3 8.8 120 28-154 31-150 (463)
12 KOG0158 Cytochrome P450 CYP3/C 99.8 4.9E-20 1.1E-24 137.8 10.0 120 31-155 30-151 (499)
13 PLN02966 cytochrome P450 83A1 99.8 3.1E-20 6.7E-25 141.2 8.1 119 32-154 29-148 (502)
14 PLN02500 cytochrome P450 90B1 99.8 3.6E-20 7.7E-25 140.5 8.4 114 30-148 36-151 (490)
15 PLN02290 cytokinin trans-hydro 99.8 8.4E-20 1.8E-24 139.3 7.8 119 31-154 41-176 (516)
16 KOG0157 Cytochrome P450 CYP4/C 99.8 1.3E-19 2.9E-24 137.4 6.8 117 31-152 34-151 (497)
17 PLN02655 ent-kaurene oxidase 99.8 2E-19 4.4E-24 135.7 7.7 117 34-153 1-117 (466)
18 PLN02774 brassinosteroid-6-oxi 99.8 1.4E-19 3.1E-24 136.4 6.8 114 32-153 31-145 (463)
19 PLN02987 Cytochrome P450, fami 99.8 4.6E-19 1E-23 133.9 8.5 114 31-149 29-144 (472)
20 PLN02302 ent-kaurenoic acid ox 99.8 4.9E-18 1.1E-22 128.8 10.1 119 30-154 40-163 (490)
21 PLN03018 homomethionine N-hydr 99.7 2.7E-17 5.9E-22 125.9 11.5 113 32-147 40-153 (534)
22 PLN02169 fatty acid (omega-1)- 99.7 4.1E-17 9E-22 124.1 10.7 111 32-147 31-144 (500)
23 PLN03141 3-epi-6-deoxocathaste 99.7 1.6E-17 3.4E-22 125.1 7.2 114 30-148 5-120 (452)
24 PLN03195 fatty acid omega-hydr 99.7 4.4E-17 9.5E-22 124.5 7.7 113 33-153 31-146 (516)
25 PF00067 p450: Cytochrome P450 99.7 1.6E-17 3.5E-22 123.8 1.7 114 34-153 1-118 (463)
26 PLN02648 allene oxide synthase 99.6 5.1E-16 1.1E-20 117.4 3.1 117 31-154 16-149 (480)
27 PLN02936 epsilon-ring hydroxyl 99.6 4.9E-15 1.1E-19 112.6 6.9 114 32-150 12-127 (489)
28 PLN02738 carotene beta-ring hy 99.5 1.1E-14 2.5E-19 113.3 5.6 97 52-153 149-245 (633)
29 KOG0159 Cytochrome P450 CYP11/ 99.4 1.6E-13 3.5E-18 102.1 5.0 121 32-154 50-175 (519)
30 KOG0684 Cytochrome P450 [Secon 99.3 4E-12 8.8E-17 93.1 7.3 116 33-154 32-148 (486)
31 PLN02426 cytochrome P450, fami 99.3 2.3E-11 5E-16 92.9 10.1 100 40-149 49-150 (502)
32 COG2124 CypX Cytochrome P450 [ 98.4 3.3E-07 7.2E-12 68.6 3.4 93 58-154 26-123 (411)
33 KOG3653 Transforming growth fa 91.2 2.3 5.1E-05 32.8 8.1 51 65-115 221-272 (534)
34 PHA03049 IMV membrane protein; 72.7 8.8 0.00019 21.0 3.3 8 16-23 18-25 (68)
35 PF12273 RCR: Chitin synthesis 69.0 4.8 0.0001 25.3 2.2 23 6-28 4-26 (130)
36 PLN02196 abscisic acid 8'-hydr 63.4 21 0.00045 27.5 5.1 7 30-36 36-42 (463)
37 PF05961 Chordopox_A13L: Chord 57.2 28 0.00062 19.2 3.5 8 16-23 18-25 (68)
38 KOG0114 Predicted RNA-binding 50.0 36 0.00078 20.8 3.4 57 32-93 12-74 (124)
39 PF13625 Helicase_C_3: Helicas 49.5 52 0.0011 20.5 4.4 38 55-94 75-112 (129)
40 COG1707 ACT domain-containing 44.8 34 0.00073 22.8 3.0 38 53-90 153-195 (218)
41 PF13893 RRM_5: RNA recognitio 42.7 48 0.001 16.8 4.5 35 61-95 2-40 (56)
42 PF11044 TMEMspv1-c74-12: Plec 40.9 50 0.0011 16.5 3.5 15 1-15 1-15 (49)
43 PF05084 GRA6: Granule antigen 40.1 54 0.0012 21.6 3.4 6 33-38 178-183 (215)
44 PF09926 DUF2158: Uncharacteri 37.2 47 0.001 17.4 2.3 18 67-84 3-20 (53)
45 PF15048 OSTbeta: Organic solu 32.1 1.3E+02 0.0029 18.9 4.3 16 8-23 41-56 (125)
46 PHA02681 ORF089 virion membran 30.0 1.2E+02 0.0025 17.6 6.3 7 14-20 17-23 (92)
47 PRK11677 hypothetical protein; 29.5 1E+02 0.0022 19.7 3.3 18 4-21 3-20 (134)
48 PF11431 Transport_MerF: Membr 28.6 37 0.00079 17.2 1.0 7 17-23 36-42 (46)
49 TIGR01661 ELAV_HUD_SF ELAV/HuD 26.8 2.6E+02 0.0056 20.5 5.8 41 55-95 281-330 (352)
50 TIGR01642 U2AF_lg U2 snRNP aux 26.1 2.3E+02 0.005 22.1 5.6 44 58-101 434-490 (509)
51 PF12385 Peptidase_C70: Papain 24.7 1.4E+02 0.0031 19.7 3.4 31 56-86 97-132 (166)
52 COG4736 CcoQ Cbb3-type cytochr 24.2 1.3E+02 0.0029 16.2 2.9 10 14-23 21-30 (60)
53 TIGR01622 SF-CC1 splicing fact 23.8 3.1E+02 0.0068 21.1 5.8 39 57-95 386-429 (457)
54 PF13994 PgaD: PgaD-like prote 23.2 1.9E+02 0.0041 18.3 3.9 9 15-23 78-86 (138)
55 PLN03134 glycine-rich RNA-bind 22.6 2.2E+02 0.0047 18.2 4.9 41 55-95 46-95 (144)
56 PHA01327 hypothetical protein 22.4 28 0.00062 17.1 -0.0 19 118-137 12-30 (49)
57 PRK13781 paaB phenylacetate-Co 21.8 61 0.0013 19.3 1.3 36 58-93 37-72 (95)
58 PF11616 EZH2_WD-Binding: WD r 21.6 34 0.00074 15.5 0.2 9 126-134 19-27 (30)
59 PTZ00404 cytochrome P450; Prov 20.5 2.5E+02 0.0054 21.7 4.7 13 24-36 24-36 (482)
60 COG1965 CyaY Protein implicate 20.4 1.4E+02 0.003 18.3 2.6 28 68-95 36-63 (106)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.92 E-value=2.6e-24 Score=161.60 Aligned_cols=118 Identities=38% Similarity=0.560 Sum_probs=103.7
Q ss_pred CCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh
Q 031562 31 TNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW 110 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 110 (157)
.+.||||+++|++||++++. ....|+.+.++.++|||++.+|+|..|+|+++|+|.++|++.+++..|..|+......
T Consensus 25 ~~lPPGP~~lPiIGnl~~l~--~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~ 102 (489)
T KOG0156|consen 25 RNLPPGPPPLPIIGNLHQLG--SLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL 102 (489)
T ss_pred CCCCcCCCCCCccccHHHcC--CCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence 58899999999999999993 3369999999999999999999999999999999999999999999999998722244
Q ss_pred hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccc
Q 031562 111 KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQ 150 (157)
Q Consensus 111 ~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~ 150 (157)
+.+..++.|++++.+|+.|+.+||++...+|+..+++++.
T Consensus 103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~ 142 (489)
T KOG0156|consen 103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFM 142 (489)
T ss_pred HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhH
Confidence 5666566899999889999999999997889999887764
No 2
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.89 E-value=9e-23 Score=155.57 Aligned_cols=123 Identities=28% Similarity=0.462 Sum_probs=99.0
Q ss_pred cCCCCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCc
Q 031562 28 KYKTNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPL 107 (157)
Q Consensus 28 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~ 107 (157)
+...+.||||.++|++|+++.+ ..+++..+.+++++||+++++++++.++++++|||++++++.++.+.|.+++...
T Consensus 30 ~~~~~~pPgp~~~P~iG~~~~~---~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~ 106 (517)
T PLN02687 30 KHKRPLPPGPRGWPVLGNLPQL---GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNS 106 (517)
T ss_pred CCCCCCCccCCCCCccccHHhc---CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCcc
Confidence 3344578999999999999877 2357889999999999999999999999999999999999998888888776543
Q ss_pred chhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 108 PTWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 108 ~~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
..+.++....+++++.+|+.|+++|++++.++|+.+++++|.+.++
T Consensus 107 -~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~ 152 (517)
T PLN02687 107 -GAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVRE 152 (517)
T ss_pred -chhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHH
Confidence 2333332224555666799999999999756899999998887664
No 3
>PLN00168 Cytochrome P450; Provisional
Probab=99.87 E-value=4.9e-22 Score=151.58 Aligned_cols=121 Identities=43% Similarity=0.832 Sum_probs=96.1
Q ss_pred CCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh
Q 031562 31 TNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW 110 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 110 (157)
.+.||||+++|++|+++.+.....+++..+.+++++||+++++++++.+.++++|||++++++.++...|..++... ..
T Consensus 34 ~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~-~~ 112 (519)
T PLN00168 34 RRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA-SS 112 (519)
T ss_pred CCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc-ch
Confidence 46688999999999997653223457889999999999999999999999999999999999998888888776533 33
Q ss_pred hhhccCCccccc-CCCCcchHHHhH-hhhhhhcCcccccccccCCC
Q 031562 111 KIISSNQHDITS-ASYGTTWRVFRR-NLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 111 ~~~~~~~~~i~~-~~~g~~W~~~R~-~~~~~~f~~~~l~~~~~~~~ 154 (157)
..++.+ ++++. ..+|+.|+++|| +++ |+|+.+++++|.+.|+
T Consensus 113 ~~~~~~-~~~~~~~~~G~~Wk~~Rr~~~~-~~fs~~~l~~~~~~~~ 156 (519)
T PLN00168 113 RLLGES-DNTITRSSYGPVWRLLRRNLVA-ETLHPSRVRLFAPARA 156 (519)
T ss_pred hhhccC-CCceeCCCCCHHHHHHHHHHHH-hccCHHHHHHHHHHHH
Confidence 444421 23333 356999999987 677 9999999999988764
No 4
>PTZ00404 cytochrome P450; Provisional
Probab=99.86 E-value=1.6e-21 Score=147.58 Aligned_cols=118 Identities=21% Similarity=0.314 Sum_probs=96.1
Q ss_pred CCCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcch
Q 031562 30 KTNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPT 109 (157)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 109 (157)
+.+.+|||+++|++|++..+. .+.+..+.+++++||+++++++++.++|+++||+++++|+.++.+.|.+++.....
T Consensus 27 ~~~~~pgp~~~p~~G~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~ 103 (482)
T PTZ00404 27 HKNELKGPIPIPILGNLHQLG---NLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSI 103 (482)
T ss_pred cCCCCCCCCCCCeeccHhhhc---ccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCccee
Confidence 357799999999999998872 36788999999999999999999999999999999999998777777666544322
Q ss_pred hhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 110 WKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 110 ~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.....+ +|++.. +|+.|+++|++++ |.|+.++++.+.+.|+
T Consensus 104 ~~~~~~--~~l~~~-~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~ 144 (482)
T PTZ00404 104 KHGTFY--HGIVTS-SGEYWKRNREIVG-KAMRKTNLKHIYDLLD 144 (482)
T ss_pred eeeccC--Cceecc-ChHHHHHHHHHHH-HHHhhhccccHHHHHH
Confidence 111122 677554 5999999999999 9999999999877654
No 5
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.85 E-value=1.2e-20 Score=143.57 Aligned_cols=122 Identities=26% Similarity=0.445 Sum_probs=96.3
Q ss_pred CCCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcch
Q 031562 30 KTNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPT 109 (157)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 109 (157)
+.+.+|||++.|++|+++.+. ....+..+.+++++||+++++++++.++|+++|||.+++|+.+++..|.+++... .
T Consensus 28 ~~~~pPgp~~~p~~g~l~~~~--~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~-~ 104 (503)
T PLN02394 28 KLKLPPGPAAVPIFGNWLQVG--DDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNV-V 104 (503)
T ss_pred cCCCCcCCCCCCeeeeHHhcC--CCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcc-h
Confidence 347799999999999998772 3335789999999999999999999999999999999999988777777665433 3
Q ss_pred hhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 110 WKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 110 ~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
...+.+.+.+.+++.+|+.|+++||.++.|.|++++++++.+.++
T Consensus 105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~ 149 (503)
T PLN02394 105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWE 149 (503)
T ss_pred HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHH
Confidence 344433223444666799999999998548999999988876653
No 6
>PLN02971 tryptophan N-hydroxylase
Probab=99.85 E-value=1.2e-20 Score=144.61 Aligned_cols=121 Identities=25% Similarity=0.436 Sum_probs=92.3
Q ss_pred CCCCCCCccCcccccccccccccCChHHHHHHHHHhhC-CeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcch
Q 031562 31 TNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLG-PVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPT 109 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg-~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 109 (157)
.+.||||+++|++|+++.+... ...+..+.++.++|| +++++++|+.++|+++|||.+++|+.+++..|.+++... .
T Consensus 56 ~~lPPGP~~lPiiGnl~~l~~~-~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~-~ 133 (543)
T PLN02971 56 HPLPPGPTGFPIVGMIPAMLKN-RPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY-A 133 (543)
T ss_pred CCCCcCCCCCCcccchHHhccC-CcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc-c
Confidence 4678999999999999887321 234678899999999 899999999999999999999999999888898887533 3
Q ss_pred hhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCC
Q 031562 110 WKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARP 153 (157)
Q Consensus 110 ~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~ 153 (157)
.+.++.+..++++..+|+.|+++|++++.+.|++..++.+.+++
T Consensus 134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~ 177 (543)
T PLN02971 134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNR 177 (543)
T ss_pred hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34444321234566679999999999973566665555554443
No 7
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.85 E-value=1.3e-20 Score=143.76 Aligned_cols=123 Identities=28% Similarity=0.428 Sum_probs=96.1
Q ss_pred cCCCCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCc
Q 031562 28 KYKTNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPL 107 (157)
Q Consensus 28 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~ 107 (157)
....+.+|||+++|++|++..+ ...++..+.+++++||+++++++++.++++++|||++++|+.++++.|.+++...
T Consensus 28 ~~~~~~ppgp~~~pl~G~~~~~---~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~ 104 (514)
T PLN03112 28 RKSLRLPPGPPRWPIVGNLLQL---GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTL 104 (514)
T ss_pred cCCCCCccCCCCCCeeeeHHhc---CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcc
Confidence 3345779999999999999877 2457888999999999999999999999999999999999988888888766442
Q ss_pred chhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 108 PTWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 108 ~~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.......+. +++++..+|+.|+++|+++..+.|+.++++.+.+.++
T Consensus 105 ~~~~~~~g~-~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~ 150 (514)
T PLN03112 105 AAVHLAYGC-GDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRA 150 (514)
T ss_pred cceeeccCC-CceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHH
Confidence 222222221 2333556699999999996537999999998877653
No 8
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.84 E-value=2.6e-20 Score=141.65 Aligned_cols=138 Identities=24% Similarity=0.359 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHH
Q 031562 11 IAVAALLKAFIGVIISSKYKTNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAH 90 (157)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~ 90 (157)
.++.++..++++.. ..+...+.||||+++|++|+++.+ ....+.++.+++++||+++++++++.++|+++|||+++
T Consensus 11 ~~~~~~~~~~~~~~-~~~~~~~~pPgp~~~Pl~G~l~~~---~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~ 86 (504)
T PLN00110 11 TLLFFITRFFIRSL-LPKPSRKLPPGPRGWPLLGALPLL---GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAAR 86 (504)
T ss_pred HHHHHHHHHHHHHH-hhcccCCCcccCCCCCeeechhhc---CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHH
Confidence 33334444444332 223344779999999999998776 23578899999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCcchhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCC
Q 031562 91 KALVQNGAIFADRPPPLPTWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARP 153 (157)
Q Consensus 91 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~ 153 (157)
+++.++...|.+++..........+.++++ ++.+|+.|+++|++++.+.|+.++++.+.+.+
T Consensus 87 ~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l-~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i 148 (504)
T PLN00110 87 AFLKTLDINFSNRPPNAGATHLAYGAQDMV-FADYGPRWKLLRKLSNLHMLGGKALEDWSQVR 148 (504)
T ss_pred HHHHhcchhhcCCCCccchhhhccCCCcee-eCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHH
Confidence 999988878887765432222222222344 56669999999999983479999999887765
No 9
>PLN02183 ferulate 5-hydroxylase
Probab=99.84 E-value=1.1e-20 Score=144.20 Aligned_cols=117 Identities=22% Similarity=0.420 Sum_probs=92.3
Q ss_pred CCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh
Q 031562 31 TNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW 110 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 110 (157)
.+.||||+++|++|+++.+ ....+..+.+++++||++|++++++.++|+++|||++++|+.+++..|..++... ..
T Consensus 35 ~~~ppgp~~~Pl~G~l~~~---~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~-~~ 110 (516)
T PLN02183 35 LPYPPGPKGLPIIGNMLMM---DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANI-AI 110 (516)
T ss_pred CCCCcCCCCCCeeccHHhc---CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCccc-ch
Confidence 3779999999999999776 2235668899999999999999999999999999999999998887787766432 22
Q ss_pred hhhccC-CcccccCCCCcchHHHhHh-hhhhhcCcccccccccCC
Q 031562 111 KIISSN-QHDITSASYGTTWRVFRRN-LSAEILHPLSCEILQARP 153 (157)
Q Consensus 111 ~~~~~~-~~~i~~~~~g~~W~~~R~~-~~~~~f~~~~l~~~~~~~ 153 (157)
..+.++ .+++ ++.+|+.|+++|++ ++ +.|+.++++.+.+++
T Consensus 111 ~~~~~~~~~~l-~~~~g~~w~~~Rr~~~~-~~f~~~~l~~~~~~~ 153 (516)
T PLN02183 111 SYLTYDRADMA-FAHYGPFWRQMRKLCVM-KLFSRKRAESWASVR 153 (516)
T ss_pred hccccCCCceE-eCCCChHHHHHHHHHHH-HhcCHHHHHHHHHHH
Confidence 222221 2444 66669999999998 46 999999888876643
No 10
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.84 E-value=2e-20 Score=142.23 Aligned_cols=121 Identities=25% Similarity=0.411 Sum_probs=94.1
Q ss_pred CCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh
Q 031562 31 TNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW 110 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 110 (157)
.+.||||+++|++|++..+. ..+++.++.+++++||+++++++++.++++++|||.+++|+.++...|.+++.....
T Consensus 27 ~~~pPgp~~~P~iG~~~~~~--~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~- 103 (499)
T PLN03234 27 LRLPPGPKGLPIIGNLHQME--KFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQ- 103 (499)
T ss_pred CCCCcCCCCCCeeccHHhcC--CCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhh-
Confidence 47799999999999998872 335677889999999999999999999999999999999999888788877654321
Q ss_pred hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 111 KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 111 ~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
......+.++.+..+++.|+++|+.+..+.|++++++++.+.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~ 147 (499)
T PLN03234 104 QTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVRE 147 (499)
T ss_pred hhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHH
Confidence 11111113344555689999999985339999999988877654
No 11
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.83 E-value=2.7e-20 Score=140.34 Aligned_cols=120 Identities=19% Similarity=0.251 Sum_probs=93.4
Q ss_pred cCCCCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCc
Q 031562 28 KYKTNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPL 107 (157)
Q Consensus 28 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~ 107 (157)
..+.+.||||+++|++|++.++ ...+++..+.+++++||+++++++++.++|+++||+.+++|+.++.+.|. +...
T Consensus 31 ~~~~~~Ppgp~~~P~iG~~~~~--~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~ 106 (463)
T PLN02196 31 STKLPLPPGTMGWPYVGETFQL--YSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFP 106 (463)
T ss_pred CCCCCCCCCCCCCCccchHHHH--HhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCc
Confidence 3345778888899999998775 24578889999999999999999999999999999999999987766662 2222
Q ss_pred chhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 108 PTWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 108 ~~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.......+ ..++++. +|+.|+++|++++ +.|++++++.+.+.++
T Consensus 107 ~~~~~~~g-~~~l~~~-~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~ 150 (463)
T PLN02196 107 ASKERMLG-KQAIFFH-QGDYHAKLRKLVL-RAFMPDAIRNMVPDIE 150 (463)
T ss_pred hHHHHHcC-ccccccc-CcHHHHHHHHHHH-HhcChHHHHHHHHHHH
Confidence 22222222 2466554 5999999999999 9999999988776553
No 12
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.83 E-value=4.9e-20 Score=137.77 Aligned_cols=120 Identities=24% Similarity=0.373 Sum_probs=93.8
Q ss_pred CCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCC--CCCCcc
Q 031562 31 TNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFAD--RPPPLP 108 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~--~~~~~~ 108 (157)
.+++|+|+++|++|++..+...... .....+...++||++.++.+.+|.++|+|||.+++|+.+++++|.. ++...+
T Consensus 30 rrGi~~~~p~p~~Gn~~~~~~~~~~-~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d 108 (499)
T KOG0158|consen 30 RRGIPGPKPLPFLGNLPGMLKRERP-GDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGD 108 (499)
T ss_pred cCCCCCCCCCCcEecHHHHHhccCc-HHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCC
Confidence 3679999999999999998544434 4444444444499999999999999999999999999999999988 443332
Q ss_pred hhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCCC
Q 031562 109 TWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQM 155 (157)
Q Consensus 109 ~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~~ 155 (157)
-.+.+.. .++ +..+|++||+.|..++ |.|++.+++.+.+.|+.
T Consensus 109 ~~~~l~~--~~L-f~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~ 151 (499)
T KOG0158|consen 109 PEDPLSA--LNL-FFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEE 151 (499)
T ss_pred CCCcccc--cCc-hhccCchHHHHHHhhc-cccchhhHHHHHHHHHH
Confidence 2223332 455 4445999999999999 99999999999888753
No 13
>PLN02966 cytochrome P450 83A1
Probab=99.82 E-value=3.1e-20 Score=141.25 Aligned_cols=119 Identities=28% Similarity=0.517 Sum_probs=93.5
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhh
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWK 111 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 111 (157)
+.||||+++|++|+++.+ ...+++..+.+++++||+++++++++.++|+++|||.+++|+.++...|.+++... ...
T Consensus 29 ~~ppgp~~~p~~G~l~~l--~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~-~~~ 105 (502)
T PLN02966 29 KLPPGPSPLPVIGNLLQL--QKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHR-GHE 105 (502)
T ss_pred CCCcCCCCCCeeccHHhc--CCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCc-cce
Confidence 678999999999999887 23467889999999999999999999999999999999999988777777665432 112
Q ss_pred hhccCCcccccCCCCcchHHHhHh-hhhhhcCcccccccccCCC
Q 031562 112 IISSNQHDITSASYGTTWRVFRRN-LSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 112 ~~~~~~~~i~~~~~g~~W~~~R~~-~~~~~f~~~~l~~~~~~~~ 154 (157)
....+.+++.+..+|+.|+++|++ ++ +.|+.++++.+.+.++
T Consensus 106 ~~~~~~~~~~~~~~g~~w~~~R~~~~~-~~f~~~~l~~~~~~i~ 148 (502)
T PLN02966 106 FISYGRRDMALNHYTPYYREIRKMGMN-HLFSPTRVATFKHVRE 148 (502)
T ss_pred eeccCcceeeeCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Confidence 221111334355569999999999 66 9999999988776653
No 14
>PLN02500 cytochrome P450 90B1
Probab=99.82 E-value=3.6e-20 Score=140.55 Aligned_cols=114 Identities=25% Similarity=0.315 Sum_probs=89.6
Q ss_pred CCCCCCCCccCccccccccccc--ccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCc
Q 031562 30 KTNLPPGPFNVPLIGNLRWLLK--SFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPL 107 (157)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~ 107 (157)
+.+.||||+++|++|+++.+.. ....++..+.+++++||+++++++++.++|+++|||++++|+.+++..|..+....
T Consensus 36 ~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~ 115 (490)
T PLN02500 36 RFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRS 115 (490)
T ss_pred CCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchH
Confidence 3467899999999999865421 22467788999999999999999999999999999999999988777665432221
Q ss_pred chhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccc
Q 031562 108 PTWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEI 148 (157)
Q Consensus 108 ~~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~ 148 (157)
....+++ .++++. +|+.|+++|++++ +.|++.+++.
T Consensus 116 -~~~~~g~--~~~~~~-~g~~wr~~Rk~~~-~~f~~~~l~~ 151 (490)
T PLN02500 116 -IGGILGK--WSMLVL-VGDMHRDMRSISL-NFLSHARLRT 151 (490)
T ss_pred -HHHHhCc--cccccc-CCHHHHHHHHHHH-HhcChHHHHH
Confidence 2334442 466555 5999999999999 9999998876
No 15
>PLN02290 cytokinin trans-hydroxylase
Probab=99.81 E-value=8.4e-20 Score=139.29 Aligned_cols=119 Identities=15% Similarity=0.164 Sum_probs=89.4
Q ss_pred CCCCCCCccCcccccccccccc----------------cCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHH
Q 031562 31 TNLPPGPFNVPLIGNLRWLLKS----------------FTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALV 94 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~----------------~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~ 94 (157)
.+.+|||+++|++||++.+... .......+.+|.++||+++++++++.+.|+++|||.+++|+.
T Consensus 41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~ 120 (516)
T PLN02290 41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT 120 (516)
T ss_pred HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence 3669999999999999877311 022333568899999999999999999999999999999998
Q ss_pred HcCCCCCCCCCCc-chhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 95 QNGAIFADRPPPL-PTWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 95 ~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
++.. +..++... .......+ +|++++ +|+.|+++|++++ +.|+.++++.+.+.++
T Consensus 121 ~~~~-~~~r~~~~~~~~~~~~g--~~l~~~-~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~ 176 (516)
T PLN02290 121 KYNT-VTGKSWLQQQGTKHFIG--RGLLMA-NGADWYHQRHIAA-PAFMGDRLKGYAGHMV 176 (516)
T ss_pred cCCC-CCCCcchhhhHHHHHhc--CCcccc-CchHHHHHHhhcc-cccCHHHHHHHHHHHH
Confidence 7633 44444221 11122222 677555 5999999999999 9999999998877653
No 16
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.79 E-value=1.3e-19 Score=137.44 Aligned_cols=117 Identities=26% Similarity=0.479 Sum_probs=98.7
Q ss_pred CCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh
Q 031562 31 TNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW 110 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 110 (157)
...+|||+++|++|+...+.........+..++..+||++++.|+++.+.|+++|||.+++|+.++.+.+.+.+......
T Consensus 34 ~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~ 113 (497)
T KOG0157|consen 34 KKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESL 113 (497)
T ss_pred hccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHH
Confidence 46799999999999999884222577889999999999999999999999999999999999977777776666655444
Q ss_pred -hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccC
Q 031562 111 -KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQAR 152 (157)
Q Consensus 111 -~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~ 152 (157)
+++| +|+++++ |+.|+++||+++ |+|+.+.++++...
T Consensus 114 ~~~lG---~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~ 151 (497)
T KOG0157|consen 114 KPWLG---DGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPV 151 (497)
T ss_pred HHHhc---CccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHH
Confidence 5555 7887777 999999999999 99999999887554
No 17
>PLN02655 ent-kaurene oxidase
Probab=99.79 E-value=2e-19 Score=135.69 Aligned_cols=117 Identities=16% Similarity=0.320 Sum_probs=92.0
Q ss_pred CCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhhhh
Q 031562 34 PPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWKII 113 (157)
Q Consensus 34 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~ 113 (157)
||||+++|++|+++++. ..+++..+.+++++||+++++++++.++++++|||++++|+.++...|.+++... ..+.+
T Consensus 1 ppgp~~lP~iG~l~~~~--~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~-~~~~~ 77 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLK--EKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSK-ALTVL 77 (466)
T ss_pred CcCCCCCCccccHHHcC--CCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhh-HHHHH
Confidence 68999999999998873 3457889999999999999999999999999999999999999888888776443 33444
Q ss_pred ccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCC
Q 031562 114 SSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARP 153 (157)
Q Consensus 114 ~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~ 153 (157)
++++.++++..+|+.|+++|+.+.++.|+...++.+.+++
T Consensus 78 ~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~ 117 (466)
T PLN02655 78 TRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTR 117 (466)
T ss_pred hcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHH
Confidence 4322335444559999999987763678877766665543
No 18
>PLN02774 brassinosteroid-6-oxidase
Probab=99.79 E-value=1.4e-19 Score=136.39 Aligned_cols=114 Identities=24% Similarity=0.370 Sum_probs=89.6
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhh
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWK 111 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 111 (157)
+.||||+++|++|+++.+. .+....+.+++++||+++++++++.++++++||+.+++|+.++...|..+.. ....+
T Consensus 31 ~~ppgp~~~P~~G~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~-~~~~~ 106 (463)
T PLN02774 31 GLPPGTMGWPLFGETTEFL---KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYP-QSMLD 106 (463)
T ss_pred CCCCCCCCCCchhhHHHHH---HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCC-HHHHH
Confidence 5678999999999987762 2456688999999999999999999999999999999999877766644322 22334
Q ss_pred hhccCCcccccCCCCcchHHHhHhhhhhhcCcccccc-cccCC
Q 031562 112 IISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEI-LQARP 153 (157)
Q Consensus 112 ~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~-~~~~~ 153 (157)
.+++ ++++. .+|+.|+++|++++ +.|++..++. +.+.+
T Consensus 107 ~lg~--~~~~~-~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~ 145 (463)
T PLN02774 107 ILGT--CNIAA-VHGSTHRYMRGSLL-SLISPTMIRDHLLPKI 145 (463)
T ss_pred HhCc--cchhh-cCCHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Confidence 4542 46654 45999999999999 9999998875 45544
No 19
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.79 E-value=4.6e-19 Score=133.87 Aligned_cols=114 Identities=19% Similarity=0.314 Sum_probs=88.3
Q ss_pred CCCCCCCccCccccccccccc--ccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcc
Q 031562 31 TNLPPGPFNVPLIGNLRWLLK--SFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLP 108 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~ 108 (157)
.+.||||.++|++|+++.+.. ...+++.++.+++++||+++++++++.++++++|||.+++++.++.+.|.++.. ..
T Consensus 29 ~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~-~~ 107 (472)
T PLN02987 29 MRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP-GS 107 (472)
T ss_pred CCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc-HH
Confidence 456889999999999987631 124578888999999999999999999999999999999999888777755432 22
Q ss_pred hhhhhccCCcccccCCCCcchHHHhHhhhhhhcCccccccc
Q 031562 109 TWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEIL 149 (157)
Q Consensus 109 ~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~ 149 (157)
....+++ +|++++ +|+.|+++|+++. +.++.+.++.+
T Consensus 108 ~~~~lg~--~~l~~~-~g~~wr~~R~~~~-~f~~~~~~~~~ 144 (472)
T PLN02987 108 ISNLLGK--HSLLLM-KGNLHKKMHSLTM-SFANSSIIKDH 144 (472)
T ss_pred HHHHhCc--cccccc-CcHHHHHHHHHHH-HhcChHHHHHH
Confidence 4455553 577666 4999999999987 65454455443
No 20
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.76 E-value=4.9e-18 Score=128.84 Aligned_cols=119 Identities=18% Similarity=0.366 Sum_probs=90.4
Q ss_pred CCCCCCCCccCccccccccccc--ccCChHHHHHHHHHhhCC--eEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCC
Q 031562 30 KTNLPPGPFNVPLIGNLRWLLK--SFTEIEPILRNLHSKLGP--VFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPP 105 (157)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~~yg~--i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~ 105 (157)
..+.||||+++|++|+++.+.. ...+.+..+.+++++||+ ++++++++.++++++|||.+++|+.++ +.|.++..
T Consensus 40 ~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~ 118 (490)
T PLN02302 40 QPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWP 118 (490)
T ss_pred CCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCc
Confidence 3467899999999999887632 235678899999999997 799999999999999999999999754 45654433
Q ss_pred CcchhhhhccCCcccccCCCCcchHHHhHhhhhhhcC-cccccccccCCC
Q 031562 106 PLPTWKIISSNQHDITSASYGTTWRVFRRNLSAEILH-PLSCEILQARPQ 154 (157)
Q Consensus 106 ~~~~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~-~~~l~~~~~~~~ 154 (157)
.. ....++. .++ ...+|+.|+++|++++ +.|+ +++++.+.+.++
T Consensus 119 ~~-~~~~~g~--~~~-~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~ 163 (490)
T PLN02302 119 ES-TVELIGR--KSF-VGITGEEHKRLRRLTA-APVNGPEALSTYIPYIE 163 (490)
T ss_pred hh-HHHHhcc--ccc-cccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHH
Confidence 22 3333442 344 4446999999999999 9985 677887776554
No 21
>PLN03018 homomethionine N-hydroxylase
Probab=99.74 E-value=2.7e-17 Score=125.94 Aligned_cols=113 Identities=21% Similarity=0.342 Sum_probs=84.7
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhh-CCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKL-GPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW 110 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-g~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 110 (157)
+.||||+++|++|+++++.... .......+..++| |+++++++++.++|+++|||.+++++.+++..|.+++... ..
T Consensus 40 ~~PPgp~~~P~iGnl~~l~~~~-~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~-~~ 117 (534)
T PLN03018 40 QLPPGPPGWPILGNLPELIMTR-PRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLS-IM 117 (534)
T ss_pred CCCcCCCCCCeeccHHHhccCC-CcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCch-hh
Confidence 4689999999999998873211 1112345555555 7999999999999999999999999998888888876543 33
Q ss_pred hhhccCCcccccCCCCcchHHHhHhhhhhhcCccccc
Q 031562 111 KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCE 147 (157)
Q Consensus 111 ~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~ 147 (157)
+.++.+..++++..+|+.|+++|++++ +.|...+..
T Consensus 118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~-~~~~~~~~~ 153 (534)
T PLN03018 118 ETIGDNYKSMGTSPYGEQFMKMKKVIT-TEIMSVKTL 153 (534)
T ss_pred hhhccCCCceEecCCCHHHHHHHHHHH-HHhcCHHHH
Confidence 445433346777766999999999999 887555443
No 22
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.72 E-value=4.1e-17 Score=124.14 Aligned_cols=111 Identities=17% Similarity=0.222 Sum_probs=86.7
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEE---EecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcc
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFT---LYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLP 108 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~---~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~ 108 (157)
+.+|||+++|++|++..+.......++++.+...+||..+. .|+++.++++++|||.+++|+.++...|++++....
T Consensus 31 ~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~ 110 (500)
T PLN02169 31 HGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK 110 (500)
T ss_pred CCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH
Confidence 56999999999999977643334466777777777886555 678899999999999999999988888877653332
Q ss_pred hhhhhccCCcccccCCCCcchHHHhHhhhhhhcCccccc
Q 031562 109 TWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCE 147 (157)
Q Consensus 109 ~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~ 147 (157)
..+.++ +|+++++ |+.|+++||+++ |+|+..+++
T Consensus 111 ~~~~~g---~gl~~~~-g~~Wr~~Rk~l~-p~F~~~~~~ 144 (500)
T PLN02169 111 IFDVLG---EGILTVD-FELWEDLRKSNH-ALFHNQDFI 144 (500)
T ss_pred HHHhhc---CcccccC-cHHHHHHHHHHH-HHhhhHHHH
Confidence 333333 7886665 999999999999 999998765
No 23
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.72 E-value=1.6e-17 Score=125.07 Aligned_cols=114 Identities=20% Similarity=0.288 Sum_probs=89.5
Q ss_pred CCCCCCCCccCcccccccccccc--cCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCc
Q 031562 30 KTNLPPGPFNVPLIGNLRWLLKS--FTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPL 107 (157)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~ 107 (157)
+.+.||||.++|++|+++.+... ...++.++.+++++||++|++++++.++|+++||+++++++.+++..|..+...
T Consensus 5 ~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~- 83 (452)
T PLN03141 5 KSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK- 83 (452)
T ss_pred CCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch-
Confidence 34668899999999999876321 245788999999999999999999999999999999999998877777644321
Q ss_pred chhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccc
Q 031562 108 PTWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEI 148 (157)
Q Consensus 108 ~~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~ 148 (157)
.....++. .++++. +|+.|+++|++++ +.|+..+++.
T Consensus 84 ~~~~l~g~--~~~~~~-~g~~wr~~r~~~~-~~~~~~~l~~ 120 (452)
T PLN03141 84 SLTELMGK--SSILLI-NGSLQRRVHGLIG-AFLKSPHLKA 120 (452)
T ss_pred hHHHHhCc--cccccc-CcHHHHHHHHHHH-HhcCcHHHHH
Confidence 12233432 466555 5999999999999 9998877765
No 24
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.70 E-value=4.4e-17 Score=124.46 Aligned_cols=113 Identities=17% Similarity=0.130 Sum_probs=85.2
Q ss_pred CCCCCccCcccccccccccccCChHHHHHHHHHhh---CCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcch
Q 031562 33 LPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKL---GPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPT 109 (157)
Q Consensus 33 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y---g~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 109 (157)
.+|||+++|++|++..+... +..+.++.++| |+++.+++++.+.++++||+.+++|+.++...|.++......
T Consensus 31 ~~pgp~~~p~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~ 106 (516)
T PLN03195 31 NRKGPKSWPIIGAALEQLKN----YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSY 106 (516)
T ss_pred ccCCCCCCCeecchHHHHhc----cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHH
Confidence 37999999999998765211 23455666666 799999999999999999999999998765667655432212
Q ss_pred hhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCC
Q 031562 110 WKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARP 153 (157)
Q Consensus 110 ~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~ 153 (157)
...+.+ +|++. .+|+.|+++|++++ +.|+.++++.+.+.+
T Consensus 107 ~~~~~g--~~l~~-~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~ 146 (516)
T PLN03195 107 MEVLLG--DGIFN-VDGELWRKQRKTAS-FEFASKNLRDFSTVV 146 (516)
T ss_pred HHHHhc--Ceeec-cCcHHHHHHHHhcc-hhhhHHHHHHHHHHH
Confidence 223333 67754 56999999999999 999999999887654
No 25
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.66 E-value=1.6e-17 Score=123.82 Aligned_cols=114 Identities=27% Similarity=0.465 Sum_probs=89.9
Q ss_pred CCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhh--
Q 031562 34 PPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWK-- 111 (157)
Q Consensus 34 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~-- 111 (157)
||||+++|++|+...+.. ..+.+..+.+++++||+++++++++.++++++||+.+++|+.++...+..++.......
T Consensus 1 Ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~ 79 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRR-KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFR 79 (463)
T ss_dssp SSCSSSBTTTBTHHHHHT-THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHH
T ss_pred CcCCCCcCceeEHHHhcC-CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccccc
Confidence 799999999999999843 46789999999999999999999999999999999999999877666655432221221
Q ss_pred -hhccCCcccccCCCCcchHHHhHhhhhhhcCcc-cccccccCC
Q 031562 112 -IISSNQHDITSASYGTTWRVFRRNLSAEILHPL-SCEILQARP 153 (157)
Q Consensus 112 -~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~-~l~~~~~~~ 153 (157)
... +.++++.. |+.|+.+|++++ +.|+.. .+ ++.+.+
T Consensus 80 ~~~~--~~~l~~~~-~~~~~~~R~~~~-~~~~~~~~~-~~~~~i 118 (463)
T PF00067_consen 80 GPFG--GKGLFFSD-GERWRRQRRLLA-PAFSSKKIL-KLEPLI 118 (463)
T ss_dssp HHHT--TTSSTTSS-HHHHHHHHHHHH-HHHSHHHHH-HHHHHH
T ss_pred cccc--cccccccc-cccccccccccc-ccccccccc-cccccc
Confidence 223 27775655 899999999999 999988 44 554443
No 26
>PLN02648 allene oxide synthase
Probab=99.59 E-value=5.1e-16 Score=117.38 Aligned_cols=117 Identities=15% Similarity=0.192 Sum_probs=90.1
Q ss_pred CCCCCCCccCccccccccccc--ccCChHHHHHHHHHhhCC-eEEEecCCccE-------EEEeCHHHHHHHHHH----c
Q 031562 31 TNLPPGPFNVPLIGNLRWLLK--SFTEIEPILRNLHSKLGP-VFTLYVGPRPA-------IFIADRSLAHKALVQ----N 96 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~~yg~-i~~~~~~~~~~-------i~i~~p~~~~~i~~~----~ 96 (157)
.+.|||+.++|++|++.++.. ...++..++.+.+++||+ ||+++++|.|+ |+++|||.++.+|.+ +
T Consensus 16 ~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~ 95 (480)
T PLN02648 16 LREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDK 95 (480)
T ss_pred CCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccc
Confidence 455899999999999987633 345667899999999998 99999999766 999999999999964 3
Q ss_pred CCCCCCCCCCcchhhhhccCCc---ccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 97 GAIFADRPPPLPTWKIISSNQH---DITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.+.+..... . ....+|+ + ++ +..+|+.|+++|+++. +.|+ .+++.|.+.|+
T Consensus 96 ~~~~~~~~~-~-~~~l~G~--~~~~s~-~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~ 149 (480)
T PLN02648 96 RDVFTGTYM-P-STAFTGG--YRVLSY-LDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFR 149 (480)
T ss_pred cccceeeec-c-CccccCC--ceeeee-cCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHH
Confidence 333444222 2 3345553 3 54 4556999999999999 9999 57788888775
No 27
>PLN02936 epsilon-ring hydroxylase
Probab=99.57 E-value=4.9e-15 Score=112.59 Aligned_cols=114 Identities=19% Similarity=0.228 Sum_probs=91.4
Q ss_pred CCCCCCccCcccccccccc--cccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcch
Q 031562 32 NLPPGPFNVPLIGNLRWLL--KSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPT 109 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~--~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 109 (157)
+.-.|-.++|++|...+.. ......+..+.+++++||+++++++++.++++++|||++++|+.+++..|.++.... .
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~-~ 90 (489)
T PLN02936 12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAE-V 90 (489)
T ss_pred ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhh-h
Confidence 3456788999999987763 344678999999999999999999999999999999999999987777787765332 3
Q ss_pred hhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccc
Q 031562 110 WKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQ 150 (157)
Q Consensus 110 ~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~ 150 (157)
...+.+ +++++. +|+.|+++||+++ |.|+..+++.+.
T Consensus 91 ~~~~~~--~~i~~~-~g~~wk~~Rk~l~-~~f~~~~l~~~~ 127 (489)
T PLN02936 91 SEFLFG--SGFAIA-EGELWTARRRAVV-PSLHRRYLSVMV 127 (489)
T ss_pred hHHHhc--CccccC-CchHHHHHHHhhc-CccCHHHHHHHH
Confidence 333333 677554 5999999999999 999988877653
No 28
>PLN02738 carotene beta-ring hydroxylase
Probab=99.53 E-value=1.1e-14 Score=113.34 Aligned_cols=97 Identities=21% Similarity=0.302 Sum_probs=78.3
Q ss_pred ccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhhhhccCCcccccCCCCcchHH
Q 031562 52 SFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWKIISSNQHDITSASYGTTWRV 131 (157)
Q Consensus 52 ~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~W~~ 131 (157)
..+..+..+.+++++||||++++++..++++++||+.+++|+.++...|.++.... ....+.+ .++++ .+|+.|++
T Consensus 149 ~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~-~~~~~~g--~~l~~-~dge~wr~ 224 (633)
T PLN02738 149 RGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAE-ILEFVMG--KGLIP-ADGEIWRV 224 (633)
T ss_pred cCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHH-HHhhccC--Cceec-CCcHHHHH
Confidence 35667889999999999999999999999999999999999987777776654322 3333333 67754 45999999
Q ss_pred HhHhhhhhhcCcccccccccCC
Q 031562 132 FRRNLSAEILHPLSCEILQARP 153 (157)
Q Consensus 132 ~R~~~~~~~f~~~~l~~~~~~~ 153 (157)
+|+.++ |.|+..+++.+.+++
T Consensus 225 rRr~l~-p~Fs~~~v~~l~~~i 245 (633)
T PLN02738 225 RRRAIV-PALHQKYVAAMISLF 245 (633)
T ss_pred HHHhcc-HhhhHHHHHHHHHHH
Confidence 999999 999999998877665
No 29
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.43 E-value=1.6e-13 Score=102.10 Aligned_cols=121 Identities=21% Similarity=0.360 Sum_probs=95.0
Q ss_pred CCCCCCccCcccccccccc-cccCChHHHHHHHHHhhCCeEEEe-cCCccEEEEeCHHHHHHHHHHcCCCCCCCC-CCcc
Q 031562 32 NLPPGPFNVPLIGNLRWLL-KSFTEIEPILRNLHSKLGPVFTLY-VGPRPAIFIADRSLAHKALVQNGAIFADRP-PPLP 108 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~-~~~~~~~~~~~~~~~~yg~i~~~~-~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~-~~~~ 108 (157)
..+|||++++++|.++.+. ....+.|+.....+++|||||+.. +|+...|++.+|+.++.++.+++. ++.++ ..+.
T Consensus 50 ~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~~~ 128 (519)
T KOG0159|consen 50 EEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLIEP 128 (519)
T ss_pred hhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccccch
Confidence 3489999999999998542 244678999999999999999999 777899999999999999976554 57774 2222
Q ss_pred h--hhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 109 T--WKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 109 ~--~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
. .....++..|++..+ |++|.+.|..+++....+++++.|.+.++
T Consensus 129 w~~~rd~~~~~~Gl~~~~-G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~ 175 (519)
T KOG0159|consen 129 WVAYRDFRGGVCGLFLLE-GPEWQRLRSALNPLLLQPQAVRRYLPQLN 175 (519)
T ss_pred hhhhHHhhccCCCcccCC-CHHHHHHHHHhchhhcCHHHHHHHhhHHH
Confidence 1 222333567886666 99999999999955789999999887654
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.34 E-value=4e-12 Score=93.15 Aligned_cols=116 Identities=13% Similarity=0.029 Sum_probs=94.0
Q ss_pred CCCCCcc-CcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhh
Q 031562 33 LPPGPFN-VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWK 111 (157)
Q Consensus 33 ~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 111 (157)
.||--.+ .|++|+...+ ..++..++++.++|||+||++.++|+.+.++.+|+....++....++.+.+.....+..
T Consensus 32 ~PPli~gwiP~lG~a~~f---gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~ 108 (486)
T KOG0684|consen 32 EPPLIKGWIPWLGSALAF---GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTT 108 (486)
T ss_pred CCcccccCcchhhHHHHh---ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhh
Confidence 4665554 5899999988 77899999999999999999999999999999999999999665445544433323444
Q ss_pred hhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 112 IISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 112 ~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
...+ .|+....++....++-+.+. ..+...++++|++.|.
T Consensus 109 ~vFg--~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~ 148 (486)
T KOG0684|consen 109 PVFG--KGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELML 148 (486)
T ss_pred hhcC--CCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHH
Confidence 4444 67777777889999999999 9999999999988874
No 31
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.30 E-value=2.3e-11 Score=92.92 Aligned_cols=100 Identities=15% Similarity=0.105 Sum_probs=73.9
Q ss_pred CcccccccccccccCChHHHHHHHHHhhC-CeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh-hhhccCC
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLG-PVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW-KIISSNQ 117 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg-~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~ 117 (157)
.++.|+.... ..+.++++..+.++++ .+++++..+. ++++|||++++|+.++.++|.++....... +.++
T Consensus 49 ~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g--- 120 (502)
T PLN02426 49 AYLTASWAKD---FDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG--- 120 (502)
T ss_pred CCccHHHHHh---cccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC---
Confidence 4567777553 3345677777777776 5778776554 899999999999988777787655433232 3333
Q ss_pred cccccCCCCcchHHHhHhhhhhhcCccccccc
Q 031562 118 HDITSASYGTTWRVFRRNLSAEILHPLSCEIL 149 (157)
Q Consensus 118 ~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~ 149 (157)
+|++++ +|+.|+++||+++ |.|+.++++.+
T Consensus 121 ~gi~~~-~g~~wk~~Rk~l~-~~fs~~~l~~~ 150 (502)
T PLN02426 121 RGIFNV-DGDSWRFQRKMAS-LELGSVSIRSY 150 (502)
T ss_pred Cceeec-CcHHHHHHHHHhH-hhhhhHHHHHH
Confidence 788554 5999999999999 99999988876
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.36 E-value=3.3e-07 Score=68.65 Aligned_cols=93 Identities=11% Similarity=0.034 Sum_probs=63.6
Q ss_pred HHHHHHHHhhCCeEEEecCCcc--EEEEeCHHHHHHHHHHcC--CCCCCCCCCcc-hhhhhccCCcccccCCCCcchHHH
Q 031562 58 PILRNLHSKLGPVFTLYVGPRP--AIFIADRSLAHKALVQNG--AIFADRPPPLP-TWKIISSNQHDITSASYGTTWRVF 132 (157)
Q Consensus 58 ~~~~~~~~~yg~i~~~~~~~~~--~i~i~~p~~~~~i~~~~~--~~~~~~~~~~~-~~~~~~~~~~~i~~~~~g~~W~~~ 132 (157)
.......+.||.+......+.. .+++++++.+++++.++. ........... ....++ .+.++..||+.|.++
T Consensus 26 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ll~~dg~~H~r~ 102 (411)
T COG2124 26 FFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPRFFSSALGAGLRPRLLRPVLG---DGSLLTLDGPEHTRL 102 (411)
T ss_pred hhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcccccccccccccccchhhhcc---ccceeecCCHHHHHH
Confidence 3445566678888888776654 899999999999996542 21111111111 123333 332344559999999
Q ss_pred hHhhhhhhcCcccccccccCCC
Q 031562 133 RRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 133 R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
||+++ +.|++++++.|.+.|+
T Consensus 103 Rkl~~-~~F~~~~~~~~~~~i~ 123 (411)
T COG2124 103 RKLLA-PAFTPRALRGYRPLIR 123 (411)
T ss_pred HHHhc-cccCHHHHHHHHHHHH
Confidence 99999 9999999999988764
No 33
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=91.17 E-value=2.3 Score=32.81 Aligned_cols=51 Identities=10% Similarity=0.096 Sum_probs=31.4
Q ss_pred HhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCc-chhhhhcc
Q 031562 65 SKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPL-PTWKIISS 115 (157)
Q Consensus 65 ~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~ 115 (157)
-+||.|++-.+-++.+.|=.=|+.-++-+.++...|....-.+ .+.++++.
T Consensus 221 Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ 272 (534)
T KOG3653|consen 221 GRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGA 272 (534)
T ss_pred CccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhch
Confidence 4678888888878777666666666666666555555443222 25555554
No 34
>PHA03049 IMV membrane protein; Provisional
Probab=72.71 E-value=8.8 Score=21.02 Aligned_cols=8 Identities=0% Similarity=0.086 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q 031562 16 LLKAFIGV 23 (157)
Q Consensus 16 ~~~~~~~~ 23 (157)
+++.++++
T Consensus 18 IvYgiYnk 25 (68)
T PHA03049 18 IVYGIYNK 25 (68)
T ss_pred HHHHHHhc
Confidence 33334333
No 35
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=69.02 E-value=4.8 Score=25.31 Aligned_cols=23 Identities=13% Similarity=0.073 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Q 031562 6 IILISIAVAALLKAFIGVIISSK 28 (157)
Q Consensus 6 ~~l~~~~~~~~~~~~~~~~~~~~ 28 (157)
++++.+++++++++++....+++
T Consensus 4 l~~iii~~i~l~~~~~~~~~rRR 26 (130)
T PF12273_consen 4 LFAIIIVAILLFLFLFYCHNRRR 26 (130)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444444555555
No 36
>PLN02196 abscisic acid 8'-hydroxylase
Probab=63.41 E-value=21 Score=27.50 Aligned_cols=7 Identities=14% Similarity=-0.140 Sum_probs=2.9
Q ss_pred CCCCCCC
Q 031562 30 KTNLPPG 36 (157)
Q Consensus 30 ~~~~~pg 36 (157)
..+.+++
T Consensus 36 ~Ppgp~~ 42 (463)
T PLN02196 36 LPPGTMG 42 (463)
T ss_pred CCCCCCC
Confidence 3444433
No 37
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=57.22 E-value=28 Score=19.17 Aligned_cols=8 Identities=13% Similarity=0.164 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q 031562 16 LLKAFIGV 23 (157)
Q Consensus 16 ~~~~~~~~ 23 (157)
+++.++.+
T Consensus 18 IlY~iYnr 25 (68)
T PF05961_consen 18 ILYGIYNR 25 (68)
T ss_pred HHHHHHhc
Confidence 33334333
No 38
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=50.03 E-value=36 Score=20.81 Aligned_cols=57 Identities=25% Similarity=0.294 Sum_probs=36.1
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCc------cEEEEeCHHHHHHHH
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPR------PAIFIADRSLAHKAL 93 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~------~~i~i~~p~~~~~i~ 93 (157)
+.+|......++-|+..- --.+-+.+++-+||+|.++++|.. .+|+-.|...++...
T Consensus 12 rlppevnriLyirNLp~~-----ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~ 74 (124)
T KOG0114|consen 12 RLPPEVNRILYIRNLPFK-----ITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKAC 74 (124)
T ss_pred CCChhhheeEEEecCCcc-----ccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHH
Confidence 334444444455554322 234577889999999999998764 346666666666665
No 39
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=49.46 E-value=52 Score=20.47 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=29.9
Q ss_pred ChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHH
Q 031562 55 EIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALV 94 (157)
Q Consensus 55 ~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~ 94 (157)
+....+.+|.++||.+--.. +...+.+.|++.++++..
T Consensus 75 ~v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~ 112 (129)
T PF13625_consen 75 NVEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLA 112 (129)
T ss_pred HHHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHh
Confidence 45668899999999765532 467788999999999984
No 40
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=44.84 E-value=34 Score=22.79 Aligned_cols=38 Identities=24% Similarity=0.356 Sum_probs=29.9
Q ss_pred cCChHHHHHHHHHhhC-CeEEEecCCc-c---EEEEeCHHHHH
Q 031562 53 FTEIEPILRNLHSKLG-PVFTLYVGPR-P---AIFIADRSLAH 90 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg-~i~~~~~~~~-~---~i~i~~p~~~~ 90 (157)
.....+...++.+++| |+.+++++|. | -++++||-.+-
T Consensus 153 GGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAG 195 (218)
T COG1707 153 GGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAG 195 (218)
T ss_pred cchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhh
Confidence 4677888999999999 9999998775 3 36888885443
No 41
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=42.67 E-value=48 Score=16.83 Aligned_cols=35 Identities=29% Similarity=0.187 Sum_probs=24.7
Q ss_pred HHHHHhhCCeEEEecCC----ccEEEEeCHHHHHHHHHH
Q 031562 61 RNLHSKLGPVFTLYVGP----RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 61 ~~~~~~yg~i~~~~~~~----~~~i~i~~p~~~~~i~~~ 95 (157)
.+..++||+|-.+.+.. .-.|-..+++.++.....
T Consensus 2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~ 40 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ 40 (56)
T ss_dssp HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 56788999988887543 345667788888887753
No 42
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=40.92 E-value=50 Score=16.55 Aligned_cols=15 Identities=13% Similarity=0.195 Sum_probs=7.5
Q ss_pred ChhHHHHHHHHHHHH
Q 031562 1 MEFGFIILISIAVAA 15 (157)
Q Consensus 1 m~~~~~~l~~~~~~~ 15 (157)
|.+|+-...++++.+
T Consensus 1 mp~wlt~iFsvvIil 15 (49)
T PF11044_consen 1 MPTWLTTIFSVVIIL 15 (49)
T ss_pred CchHHHHHHHHHHHH
Confidence 566665444444333
No 43
>PF05084 GRA6: Granule antigen protein (GRA6); InterPro: IPR008119 Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage []. The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=40.10 E-value=54 Score=21.61 Aligned_cols=6 Identities=50% Similarity=0.949 Sum_probs=3.3
Q ss_pred CCCCCc
Q 031562 33 LPPGPF 38 (157)
Q Consensus 33 ~~pgp~ 38 (157)
.||.|.
T Consensus 178 sppeps 183 (215)
T PF05084_consen 178 SPPEPS 183 (215)
T ss_pred CCCCCC
Confidence 366654
No 44
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=37.19 E-value=47 Score=17.39 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=15.5
Q ss_pred hCCeEEEecCCccEEEEe
Q 031562 67 LGPVFTLYVGPRPAIFIA 84 (157)
Q Consensus 67 yg~i~~~~~~~~~~i~i~ 84 (157)
-|+++++..||..|.+..
T Consensus 3 ~GDvV~LKSGGp~MTV~~ 20 (53)
T PF09926_consen 3 IGDVVQLKSGGPRMTVTE 20 (53)
T ss_pred CCCEEEEccCCCCeEEEE
Confidence 388999999999998875
No 45
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=32.07 E-value=1.3e+02 Score=18.88 Aligned_cols=16 Identities=19% Similarity=0.245 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHHHH
Q 031562 8 LISIAVAALLKAFIGV 23 (157)
Q Consensus 8 l~~~~~~~~~~~~~~~ 23 (157)
.+++++.++-++++.+
T Consensus 41 ~Ls~vvlvi~~~LLgr 56 (125)
T PF15048_consen 41 ALSFVVLVISFFLLGR 56 (125)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333334333
No 46
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=30.01 E-value=1.2e+02 Score=17.58 Aligned_cols=7 Identities=0% Similarity=0.083 Sum_probs=2.6
Q ss_pred HHHHHHH
Q 031562 14 AALLKAF 20 (157)
Q Consensus 14 ~~~~~~~ 20 (157)
|++++..
T Consensus 17 clliya~ 23 (92)
T PHA02681 17 CYIVIMM 23 (92)
T ss_pred HHHHHHH
Confidence 3333333
No 47
>PRK11677 hypothetical protein; Provisional
Probab=29.47 E-value=1e+02 Score=19.71 Aligned_cols=18 Identities=22% Similarity=0.209 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 031562 4 GFIILISIAVAALLKAFI 21 (157)
Q Consensus 4 ~~~~l~~~~~~~~~~~~~ 21 (157)
|.++++++++.+++=++.
T Consensus 3 W~~a~i~livG~iiG~~~ 20 (134)
T PRK11677 3 WEYALIGLVVGIIIGAVA 20 (134)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 555555555555443333
No 48
>PF11431 Transport_MerF: Membrane transport protein MerF; InterPro: IPR021091 This entry represents Mercury ion transport protein MerF, which has a core helix-loop-helix domain. It also has two vicinal pairs of cysteine residues which are involved in the transport of Hg(II) across the membrane and are exposed to the cytoplasm []. ; PDB: 1WAZ_A 2LJ2_A 2H3O_A.
Probab=28.57 E-value=37 Score=17.19 Aligned_cols=7 Identities=14% Similarity=0.017 Sum_probs=2.6
Q ss_pred HHHHHHH
Q 031562 17 LKAFIGV 23 (157)
Q Consensus 17 ~~~~~~~ 23 (157)
++.++++
T Consensus 36 ~yal~r~ 42 (46)
T PF11431_consen 36 IYALWRR 42 (46)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 49
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=26.79 E-value=2.6e+02 Score=20.49 Aligned_cols=41 Identities=17% Similarity=0.181 Sum_probs=30.0
Q ss_pred ChHHHHHHHHHhhCCeEEEecCCc---------cEEEEeCHHHHHHHHHH
Q 031562 55 EIEPILRNLHSKLGPVFTLYVGPR---------PAIFIADRSLAHKALVQ 95 (157)
Q Consensus 55 ~~~~~~~~~~~~yg~i~~~~~~~~---------~~i~i~~p~~~~~i~~~ 95 (157)
.-.+.+.+++.+||+|..+.+.-. -+|...+++.+...+..
T Consensus 281 ~~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~ 330 (352)
T TIGR01661 281 TDETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILS 330 (352)
T ss_pred CCHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 345678888999999988876432 36778888887777643
No 50
>TIGR01642 U2AF_lg U2 snRNP auxilliary factor, large subunit, splicing factor. Members of this subfamily are found in plants, metazoa and fungi.
Probab=26.13 E-value=2.3e+02 Score=22.10 Aligned_cols=44 Identities=27% Similarity=0.339 Sum_probs=31.5
Q ss_pred HHHHHHHHhhCCeEEEecC------------CccEEEEeCHHHHHHHHHH-cCCCCC
Q 031562 58 PILRNLHSKLGPVFTLYVG------------PRPAIFIADRSLAHKALVQ-NGAIFA 101 (157)
Q Consensus 58 ~~~~~~~~~yg~i~~~~~~------------~~~~i~i~~p~~~~~i~~~-~~~~~~ 101 (157)
+.+.+.+.+||+|..+.+. |.-.|-..+.+.++..+.. ++..|.
T Consensus 434 edl~~~f~~~G~v~~v~i~~~~~~~~~~~~~G~~fV~F~~~e~A~~A~~~lnGr~~~ 490 (509)
T TIGR01642 434 EDVKTEFSKYGPLINIVIPRPNGDRNSTPGVGKVFLEYADVRSAEKAMEGMNGRKFN 490 (509)
T ss_pred HHHHHHHHhcCCeeEEEeeccCcCCCcCCCcceEEEEECCHHHHHHHHHHcCCCEEC
Confidence 4567788999998888764 2346888899999888754 333443
No 51
>PF12385 Peptidase_C70: Papain-like cysteine protease AvrRpt2; InterPro: IPR022118 This is a family of cysteine proteases, found in actinobacteria, protobacteria and firmicutes. Papain-like cysteine proteases play a crucial role in plant-pathogen/pest interactions. On entering the host they act on non-self substrates, thereby manipulating the host to evade proteolysis []. AvrRpt2 from Pseudomonas syringae pv tomato DC3000 triggers resistance to P. syringae-2-dependent defence responses, including hypersensitive cell death, by cleaving the Arabidopsis RIN4 protein which is monitored by the cognate resistance protein RPS2 [].
Probab=24.70 E-value=1.4e+02 Score=19.71 Aligned_cols=31 Identities=23% Similarity=0.278 Sum_probs=20.0
Q ss_pred hHHHHHHHHHhhCCeEEEe-cCCc----cEEEEeCH
Q 031562 56 IEPILRNLHSKLGPVFTLY-VGPR----PAIFIADR 86 (157)
Q Consensus 56 ~~~~~~~~~~~yg~i~~~~-~~~~----~~i~i~~p 86 (157)
-.+.+..+.++|||+..-+ .++. -++|++..
T Consensus 97 t~e~~~~LL~~yGPLwv~~~~P~~~~~~H~~ViTGI 132 (166)
T PF12385_consen 97 TAEGLANLLREYGPLWVAWEAPGDSWVAHASVITGI 132 (166)
T ss_pred CHHHHHHHHHHcCCeEEEecCCCCcceeeEEEEEee
Confidence 3567888999999966654 4443 34555543
No 52
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=24.18 E-value=1.3e+02 Score=16.23 Aligned_cols=10 Identities=0% Similarity=0.002 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 031562 14 AALLKAFIGV 23 (157)
Q Consensus 14 ~~~~~~~~~~ 23 (157)
+++.+.++.+
T Consensus 21 ~fiavi~~ay 30 (60)
T COG4736 21 FFIAVIYFAY 30 (60)
T ss_pred HHHHHHHHHh
Confidence 3333333333
No 53
>TIGR01622 SF-CC1 splicing factor, CC1-like family. A homologous gene from Plasmodium falciparum was identified in the course of the analysis of that genome at TIGR and was included in the model.
Probab=23.79 E-value=3.1e+02 Score=21.05 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=27.9
Q ss_pred HHHHHHHHHhhCCeEEEecC-----CccEEEEeCHHHHHHHHHH
Q 031562 57 EPILRNLHSKLGPVFTLYVG-----PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 57 ~~~~~~~~~~yg~i~~~~~~-----~~~~i~i~~p~~~~~i~~~ 95 (157)
.+.+.+.+.+||+|..+.+. |.-.|-..+.+.+......
T Consensus 386 ~~dv~~e~~k~G~v~~v~v~~~~~~G~~fV~F~~~e~A~~A~~~ 429 (457)
T TIGR01622 386 LDDVKEECSKYGGVVHIYVDTKNSAGKIYLKFSSVDAALAAFQA 429 (457)
T ss_pred HHHHHHHHHhcCCeeEEEEeCCCCceeEEEEECCHHHHHHHHHH
Confidence 45577778899998887654 3445667888888877754
No 54
>PF13994 PgaD: PgaD-like protein
Probab=23.22 E-value=1.9e+02 Score=18.34 Aligned_cols=9 Identities=22% Similarity=-0.038 Sum_probs=3.9
Q ss_pred HHHHHHHHH
Q 031562 15 ALLKAFIGV 23 (157)
Q Consensus 15 ~~~~~~~~~ 23 (157)
++++..+.+
T Consensus 78 Li~Wa~yn~ 86 (138)
T PF13994_consen 78 LILWAKYNR 86 (138)
T ss_pred HHHHHHHHH
Confidence 344444443
No 55
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=22.56 E-value=2.2e+02 Score=18.18 Aligned_cols=41 Identities=20% Similarity=0.161 Sum_probs=30.9
Q ss_pred ChHHHHHHHHHhhCCeEEEecC---------CccEEEEeCHHHHHHHHHH
Q 031562 55 EIEPILRNLHSKLGPVFTLYVG---------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 55 ~~~~~~~~~~~~yg~i~~~~~~---------~~~~i~i~~p~~~~~i~~~ 95 (157)
--.+.+.+++++||+|..+.+. +.-+|-..+++.++.++..
T Consensus 46 ~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~ 95 (144)
T PLN03134 46 TDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 (144)
T ss_pred CCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 3466788889999998777553 2356778899999999854
No 56
>PHA01327 hypothetical protein
Probab=22.38 E-value=28 Score=17.11 Aligned_cols=19 Identities=11% Similarity=0.440 Sum_probs=12.7
Q ss_pred cccccCCCCcchHHHhHhhh
Q 031562 118 HDITSASYGTTWRVFRRNLS 137 (157)
Q Consensus 118 ~~i~~~~~g~~W~~~R~~~~ 137 (157)
+++ ..+.|++|...|.-+.
T Consensus 12 ~~v-inehge~wqer~drmk 30 (49)
T PHA01327 12 NNV-INEHGEEWQERKDRMK 30 (49)
T ss_pred chH-HHhhHHHHHHHHHHHH
Confidence 454 4455999998875543
No 57
>PRK13781 paaB phenylacetate-CoA oxygenase subunit PaaB; Provisional
Probab=21.81 E-value=61 Score=19.29 Aligned_cols=36 Identities=17% Similarity=0.186 Sum_probs=26.1
Q ss_pred HHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHH
Q 031562 58 PILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKAL 93 (157)
Q Consensus 58 ~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~ 93 (157)
+.-++.+.+.++-+.+|+-....|.-++|+.....|
T Consensus 37 ~~Ar~~y~RR~e~vsiWVVp~~~I~as~p~ek~~~f 72 (95)
T PRK13781 37 RNARDVYTRRNEGVSIWVVPSSAITASDPDEKGPFF 72 (95)
T ss_pred HHHHHHhccccCCcEEEEeeHHHccccChhhhhhcc
Confidence 334444555568899998888889999999655555
No 58
>PF11616 EZH2_WD-Binding: WD repeat binding protein EZH2; InterPro: IPR021654 This family of proteins represents Enhancer of zest homologue 2, (EZH2) a 30 residue peptide which binds to a WD-repeat domain of EED by residues 39-68. EED is a component of PRC2 complex which is involved in gene expression []. This interaction is required for the HMTase activity of PCR2 []. ; GO: 0018024 histone-lysine N-methyltransferase activity; PDB: 2QXV_B.
Probab=21.65 E-value=34 Score=15.51 Aligned_cols=9 Identities=22% Similarity=0.730 Sum_probs=4.6
Q ss_pred CcchHHHhH
Q 031562 126 GTTWRVFRR 134 (157)
Q Consensus 126 g~~W~~~R~ 134 (157)
.++|+..|-
T Consensus 19 N~eWk~lRi 27 (30)
T PF11616_consen 19 NEEWKKLRI 27 (30)
T ss_dssp HHHHHH---
T ss_pred HHHHHHhcc
Confidence 468888773
No 59
>PTZ00404 cytochrome P450; Provisional
Probab=20.53 E-value=2.5e+02 Score=21.73 Aligned_cols=13 Identities=15% Similarity=-0.118 Sum_probs=7.3
Q ss_pred HHhccCCCCCCCC
Q 031562 24 IISSKYKTNLPPG 36 (157)
Q Consensus 24 ~~~~~~~~~~~pg 36 (157)
++.++...+.|++
T Consensus 24 ~~~~~~~~pgp~~ 36 (482)
T PTZ00404 24 KKIHKNELKGPIP 36 (482)
T ss_pred hhccCCCCCCCCC
Confidence 3445556666654
No 60
>COG1965 CyaY Protein implicated in iron transport, frataxin homolog [Inorganic ion transport and metabolism]
Probab=20.44 E-value=1.4e+02 Score=18.26 Aligned_cols=28 Identities=21% Similarity=0.284 Sum_probs=25.4
Q ss_pred CCeEEEecCCccEEEEeCHHHHHHHHHH
Q 031562 68 GPVFTLYVGPRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 68 g~i~~~~~~~~~~i~i~~p~~~~~i~~~ 95 (157)
|.|+.+.+.....++++..+-.++|-..
T Consensus 36 g~VlTl~f~ngs~iiINkQ~P~~qiWlA 63 (106)
T COG1965 36 GGVLTLTFDNGSQIIINKQEPLQQIWLA 63 (106)
T ss_pred CCEEEEEECCCcEEEEeCCChHHHHHhh
Confidence 6899999999999999999999999754
Done!