Query 031562
Match_columns 157
No_of_seqs 127 out of 1250
Neff 10.6
Searched_HMMs 29240
Date Tue Mar 26 01:43:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031562.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031562hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbg_A Cytochrome P450 2D6; mo 99.9 2.8E-21 9.4E-26 144.4 9.9 113 32-148 10-124 (479)
2 3swz_A Steroid 17-alpha-hydrox 99.8 3.3E-21 1.1E-25 144.7 7.9 121 30-153 6-128 (494)
3 3s79_A Cytochrome P450 19A1; o 99.8 1.2E-21 4.2E-26 147.2 4.7 119 32-153 45-164 (503)
4 3nxu_A Cytochrome P450 3A4; al 99.8 1.5E-21 5.2E-26 146.1 4.9 114 32-154 14-128 (485)
5 3pm0_A Cypib1, cytochrome P450 99.8 2.6E-20 8.7E-25 140.1 6.3 110 31-146 8-117 (507)
6 3ld6_A Lanosterol 14-alpha dem 99.8 7.9E-21 2.7E-25 141.7 2.1 117 32-154 11-128 (461)
7 3qz1_A Steroid 21-hydroxylase; 99.8 2.6E-20 9.1E-25 139.7 4.5 115 30-154 27-141 (496)
8 3k9v_A 1,25-dihydroxyvitamin D 99.8 1.1E-19 3.9E-24 135.7 5.5 121 30-153 22-147 (482)
9 3gw9_A Sterol 14alpha-demethyl 99.8 7.6E-20 2.6E-24 135.6 3.7 117 31-154 2-120 (450)
10 3e6i_A CYPIIE1, P450-J, cytoch 99.8 1.2E-18 4.3E-23 130.0 10.2 108 31-145 9-116 (476)
11 3i3k_A Lanosterol 14-alpha dem 99.8 8E-20 2.7E-24 136.2 2.1 119 30-154 9-128 (461)
12 2hi4_A Cytochrome P450 1A2; CY 99.8 2.3E-18 7.9E-23 129.5 8.5 107 30-142 14-121 (495)
13 2fdv_A Cytochrome P450 2A6; CY 99.7 2.2E-18 7.4E-23 129.0 6.1 116 32-153 10-127 (476)
14 3czh_A Cytochrome P450 2R1; vi 99.7 2.8E-18 9.7E-23 128.6 6.7 112 32-146 12-123 (481)
15 1po5_A Cytochrome P450 2B4; ox 99.7 2.2E-18 7.6E-23 129.0 5.9 115 32-152 10-126 (476)
16 2ij2_A Cytochrome P450 BM3; mo 99.7 5.1E-18 1.8E-22 126.9 6.9 115 32-154 3-120 (470)
17 1r9o_A Cytochrome P450 2C9; mo 99.7 3.1E-18 1.1E-22 128.1 5.7 116 32-153 11-128 (477)
18 3n9y_A Cholesterol SIDE-chain 99.7 8.6E-18 2.9E-22 125.8 5.3 122 29-154 6-132 (487)
19 3dbg_A Putative cytochrome P45 99.7 8.1E-18 2.8E-22 125.6 3.1 113 32-154 23-136 (467)
20 2ve3_A Putative cytochrome P45 99.7 8.7E-18 3E-22 124.8 3.1 115 31-154 11-125 (444)
21 3v8d_A Cholesterol 7-alpha-mon 99.7 3.5E-18 1.2E-22 128.3 0.8 116 30-153 11-128 (491)
22 2cib_A Cytochrome P450 51; hem 99.7 2.4E-17 8.3E-22 122.8 5.2 114 32-154 4-118 (455)
23 2cd8_A Cytochrome P450 monooxy 99.7 3.3E-17 1.1E-21 121.6 3.9 114 32-154 26-144 (436)
24 1n97_A CYP175A1; electron tran 99.6 1.7E-16 5.8E-21 116.2 -0.2 110 35-154 2-111 (389)
25 3dax_A Cytochrome P450 7A1; ch 99.6 3.6E-16 1.2E-20 117.1 0.3 114 31-152 12-127 (491)
26 1jfb_A Nitric-oxide reductase 99.5 1.3E-14 4.4E-19 106.6 5.1 111 34-154 3-119 (404)
27 3b6h_A Prostacyclin synthase; 99.5 3.2E-15 1.1E-19 112.3 1.0 111 31-151 17-128 (498)
28 3mdm_A Cholesterol 24-hydroxyl 99.5 2.3E-14 7.8E-19 106.5 4.0 99 53-154 9-110 (456)
29 3b98_A Prostaglandin I2 syntha 99.5 3.4E-15 1.1E-19 111.5 -0.5 112 31-153 17-129 (475)
30 1izo_A P450bsbeta, cytochrome 99.5 1.4E-14 4.7E-19 106.8 2.4 106 41-154 9-116 (417)
31 2zbx_A Cytochrome P450-SU1; be 99.5 8.2E-14 2.8E-18 102.7 5.9 115 32-154 5-127 (412)
32 1ued_A P450 OXYC, P450 monooxy 99.4 6E-14 2.1E-18 103.2 4.8 110 31-154 9-129 (406)
33 3awm_A Fatty acid alpha-hydrox 99.4 6.4E-14 2.2E-18 103.2 2.6 110 34-154 4-115 (415)
34 3dsk_A Cytochrome P450 74A, ch 99.4 9.3E-14 3.2E-18 104.3 3.4 121 29-153 25-159 (495)
35 1s1f_A Putative cytochrome P45 99.4 6.8E-13 2.3E-17 97.6 5.8 112 32-154 8-125 (406)
36 2zwu_A Camphor 5-monooxygenase 99.4 8.3E-13 2.9E-17 97.5 5.9 117 31-154 10-133 (415)
37 3oo3_A OXY protein; cytochrome 99.3 3.7E-13 1.3E-17 98.2 3.7 97 53-154 11-111 (384)
38 3ejb_B Biotin biosynthesis cyt 99.3 1.6E-12 5.5E-17 95.4 6.1 94 54-154 13-112 (404)
39 4fb2_A P450CIN; heme, monooxyg 99.3 1.1E-12 3.8E-17 96.2 4.5 97 53-154 18-116 (398)
40 2jjn_A Cytochrome P450 113A1; 99.3 9.9E-13 3.4E-17 96.9 3.8 102 31-154 18-119 (411)
41 3abb_A CYP105D6, cytochrome P4 99.3 1.9E-12 6.4E-17 95.3 5.2 95 53-154 23-126 (408)
42 1z8o_A 6-deoxyerythronolide B 99.3 3.5E-12 1.2E-16 93.7 6.1 95 53-154 13-122 (404)
43 3ivy_A Cytochrome P450 CYP125; 99.3 7.5E-12 2.6E-16 92.8 7.4 114 34-154 20-148 (433)
44 1cpt_A Cytochrome P450-TERP; o 99.3 3.4E-12 1.1E-16 94.5 5.0 114 32-154 6-134 (428)
45 3a4g_A Vitamin D hydroxylase; 99.3 2.7E-12 9.3E-17 94.6 3.8 97 53-154 19-119 (411)
46 3aba_A Cytochrome P450; oxidor 99.2 2.9E-12 9.8E-17 94.2 3.6 94 54-154 19-119 (403)
47 3dan_A Cytochrome P450 74A2; A 99.2 2.4E-12 8.3E-17 96.0 3.2 122 29-154 6-142 (473)
48 2y5n_A MYCG, P-450-like protei 99.2 6.4E-12 2.2E-16 92.8 4.7 95 53-154 36-135 (417)
49 3lxh_A Cytochrome P450; heme, 99.2 1.9E-11 6.6E-16 90.2 6.5 97 53-154 37-134 (421)
50 2z36_A MOXA, cytochrome P450 t 99.2 1.1E-11 3.9E-16 91.3 4.1 94 54-154 22-127 (413)
51 1odo_A Putative cytochrome P45 99.2 9.4E-12 3.2E-16 91.6 3.3 95 53-154 14-119 (408)
52 3oft_A Cytochrome P450, CYP101 99.2 1.8E-11 6.3E-16 89.6 4.7 95 53-154 23-118 (396)
53 2xbk_A PIMD protein; epoxidati 99.2 1.4E-11 4.9E-16 90.6 4.1 94 54-154 26-129 (404)
54 2wm5_A CYP124, putative cytoch 99.2 1.5E-11 5.1E-16 91.3 4.2 97 54-154 44-149 (435)
55 2z3t_A Cytochrome P450; monoxy 99.2 2.1E-11 7.3E-16 90.2 4.7 94 54-154 20-130 (425)
56 3tyw_A Putative cytochrome P45 99.2 2.3E-11 7.8E-16 89.7 4.4 97 53-154 28-131 (417)
57 2uuq_A CYP130, cytochrome P450 99.2 2.4E-11 8.1E-16 89.7 4.4 95 54-154 25-128 (414)
58 1gwi_A CYP154C1, cytochrome P4 99.1 3.1E-11 1E-15 89.0 5.0 97 53-154 16-124 (411)
59 2dkk_A Cytochrome P450; CYP158 99.1 1.5E-11 5.1E-16 90.7 3.2 96 54-154 27-128 (411)
60 1q5d_A P450 epoxidase; cytochr 99.1 1.8E-11 6E-16 90.4 2.9 95 53-154 25-127 (419)
61 2xkr_A CYP142, putative cytoch 99.1 6.9E-11 2.4E-15 86.6 4.8 90 54-154 18-107 (398)
62 3nc3_A Cytochrome P450 CYPX; c 99.1 2.1E-11 7.1E-16 90.7 0.7 93 54-154 53-145 (441)
63 3tkt_A Cytochrome P450; aromat 99.1 8.9E-11 3E-15 87.5 3.9 95 56-154 47-156 (450)
64 3mgx_A Putative P450 monooxyge 99.0 1.2E-10 4E-15 86.0 4.3 96 54-154 37-138 (415)
65 3r9b_A Cytochrome P450 164A2; 99.0 2.3E-10 7.7E-15 84.3 4.7 95 53-154 28-129 (418)
66 3buj_A CALO2; heme, iron, meta 99.0 1.6E-10 5.5E-15 84.7 3.2 92 55-154 14-111 (397)
67 1lfk_A OXYB, P450 monooxygenas 99.0 2.2E-10 7.6E-15 84.0 2.9 88 61-154 20-120 (398)
68 1io7_A Cytochrome P450 CYP119; 98.9 4.5E-10 1.5E-14 81.5 3.2 90 57-154 2-100 (368)
69 2rfb_A Cytochrome P450; heme, 98.9 2.9E-10 9.8E-15 81.8 2.0 78 65-154 2-79 (343)
70 3b4x_A 367AA long hypothetical 98.9 1.1E-09 3.8E-14 79.5 4.9 84 57-148 2-94 (367)
71 1n40_A P450 MT2, cytochrome P4 98.9 3.9E-10 1.3E-14 82.7 2.2 89 54-154 16-114 (396)
72 3rwl_A Cytochrome P450 alkane 98.8 4.5E-09 1.5E-13 77.8 5.9 95 54-154 38-143 (426)
73 4dnj_A Putative cytochrome P45 98.7 1.3E-08 4.4E-13 75.0 5.2 96 54-154 34-131 (412)
74 3p3o_A Cytochrome P450; monoox 98.6 5.2E-09 1.8E-13 77.1 -1.0 90 55-154 34-132 (416)
75 2wiy_A XPLA-heme, cytochrome P 98.5 2.2E-08 7.5E-13 73.3 1.4 91 55-154 21-111 (394)
76 4dxy_A Cytochrome P450, CYP101 98.2 2.5E-06 8.5E-11 63.0 6.8 97 53-154 36-133 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 96.4 0.00037 1.3E-08 50.9 -0.8 90 34-142 36-136 (381)
78 2diu_A KIAA0430 protein; struc 75.7 9.2 0.00031 22.0 6.2 62 41-104 12-75 (96)
79 3d2w_A TAR DNA-binding protein 68.5 13 0.00043 20.5 5.4 52 36-92 9-64 (89)
80 1s79_A Lupus LA protein; RRM, 66.5 16 0.00054 20.9 5.4 50 40-94 13-70 (103)
81 3ue2_A Poly(U)-binding-splicin 64.2 20 0.00067 21.2 5.3 66 38-103 20-99 (118)
82 3lqv_A PRE-mRNA branch site pr 60.5 21 0.00073 20.4 7.5 63 34-101 4-73 (115)
83 3s6e_A RNA-binding protein 39; 56.4 16 0.00056 21.4 3.8 69 34-102 3-82 (114)
84 1iqt_A AUF1, heterogeneous nuc 55.3 20 0.00069 18.5 4.2 39 57-95 13-60 (75)
85 1whv_A Poly(A)-specific ribonu 54.8 29 0.00098 20.1 5.1 40 56-95 28-68 (100)
86 3s8s_A Histone-lysine N-methyl 54.4 29 0.00098 20.0 5.1 52 39-95 7-67 (110)
87 3v4m_A Splicing factor U2AF 65 53.4 29 0.001 19.8 5.7 48 56-103 28-87 (105)
88 2pe8_A Splicing factor 45; RRM 52.4 31 0.0011 19.7 4.7 67 35-101 5-82 (105)
89 1sjq_A Polypyrimidine tract-bi 49.4 36 0.0012 19.6 5.7 56 34-94 12-70 (105)
90 1x4c_A Splicing factor, argini 47.0 38 0.0013 19.1 6.6 51 40-95 17-69 (108)
91 2mss_A Protein (musashi1); RNA 43.8 33 0.0011 17.6 4.7 38 57-94 13-59 (75)
92 3s7r_A Heterogeneous nuclear r 43.0 36 0.0012 18.1 3.7 52 39-95 12-72 (87)
93 3zzy_A Polypyrimidine tract-bi 40.8 59 0.002 19.6 4.7 51 40-95 30-85 (130)
94 1x4e_A RNA binding motif, sing 40.6 41 0.0014 17.8 4.5 51 39-94 6-65 (85)
95 4f25_A Polyadenylate-binding p 40.4 52 0.0018 18.8 5.1 50 41-95 8-64 (115)
96 2nlw_A Eukaryotic translation 40.0 50 0.0017 18.5 6.7 54 40-95 17-80 (105)
97 2d9o_A DNAJ (HSP40) homolog, s 39.7 52 0.0018 18.6 5.1 40 56-95 30-73 (100)
98 1rk8_A CG8781-PA, CG8781-PA pr 38.8 67 0.0023 19.7 5.5 50 41-95 75-133 (165)
99 2cqc_A Arginine/serine-rich sp 38.4 48 0.0016 17.9 6.3 56 35-95 12-76 (95)
100 2krb_A Eukaryotic translation 37.3 47 0.0016 17.4 6.4 39 56-94 20-65 (81)
101 2kxn_B Transformer-2 protein h 37.0 65 0.0022 19.0 8.0 54 37-95 45-107 (129)
102 2div_A TRNA selenocysteine ass 36.2 55 0.0019 17.9 5.2 55 36-95 7-71 (99)
103 3ctr_A Poly(A)-specific ribonu 35.6 18 0.0006 21.0 1.5 39 57-95 19-58 (101)
104 2jrs_A RNA-binding protein 39; 35.4 62 0.0021 18.3 5.5 51 40-95 28-87 (108)
105 4f02_A Polyadenylate-binding p 35.4 85 0.0029 20.1 5.1 54 37-95 14-76 (213)
106 2dhg_A TRNA selenocysteine ass 35.3 58 0.002 18.0 6.5 57 34-95 5-70 (104)
107 2a3j_A U1 small nuclear ribonu 34.9 72 0.0025 18.9 7.2 55 40-95 31-91 (127)
108 2ad9_A Polypyrimidine tract-bi 33.8 74 0.0025 18.7 5.1 51 39-94 32-85 (119)
109 1x5p_A Negative elongation fac 33.8 61 0.0021 17.7 5.0 39 57-95 27-68 (97)
110 2dnh_A Bruno-like 5, RNA bindi 33.7 63 0.0021 17.9 5.1 52 39-95 16-75 (105)
111 3pgw_S U1-70K; protein-RNA com 33.1 1.2E+02 0.0041 22.4 6.0 52 39-95 103-163 (437)
112 2dgv_A HnRNP M, heterogeneous 32.2 62 0.0021 17.3 6.6 51 40-95 10-67 (92)
113 2dnz_A Probable RNA-binding pr 31.6 65 0.0022 17.4 6.8 57 40-101 7-73 (95)
114 2bz2_A Negative elongation fac 31.2 76 0.0026 18.5 4.0 39 57-95 51-92 (121)
115 2cq1_A PTB-like protein L; RRM 30.8 75 0.0026 17.9 4.7 51 39-94 16-69 (101)
116 2jvr_A Nucleolar protein 3; RN 30.3 82 0.0028 18.1 5.7 51 40-95 30-86 (111)
117 2rs2_A Musashi-1, RNA-binding 29.8 79 0.0027 17.8 5.2 51 40-95 27-86 (109)
118 3bs9_A Nucleolysin TIA-1 isofo 29.3 68 0.0023 16.9 5.0 50 41-95 9-67 (87)
119 2x1f_A MRNA 3'-END-processing 28.8 75 0.0026 17.2 6.2 39 57-95 16-63 (96)
120 2cqb_A Peptidyl-prolyl CIS-tra 28.6 78 0.0027 17.3 4.9 55 36-95 10-73 (102)
121 2dh8_A DAZ-associated protein 28.4 80 0.0027 17.4 4.5 53 39-96 17-78 (105)
122 1why_A Hypothetical protein ri 28.3 77 0.0026 17.2 6.7 52 39-95 18-72 (97)
123 2dnm_A SRP46 splicing factor; 28.2 80 0.0027 17.4 6.3 51 40-95 15-74 (103)
124 1sjr_A Polypyrimidine tract-bi 28.0 1.2E+02 0.004 19.2 6.2 50 41-95 49-103 (164)
125 2cpf_A RNA binding motif prote 27.3 80 0.0028 17.1 5.7 51 40-95 7-69 (98)
126 3ulh_A THO complex subunit 4; 27.3 85 0.0029 17.4 5.5 51 40-95 31-89 (107)
127 1x4d_A Matrin 3; structural ge 27.2 91 0.0031 17.7 5.9 54 37-94 14-70 (102)
128 3ns6_A Eukaryotic translation 26.7 87 0.003 17.3 5.9 56 40-95 8-73 (100)
129 2dit_A HIV TAT specific factor 26.6 93 0.0032 17.6 4.4 62 34-95 11-83 (112)
130 2la6_A RNA-binding protein FUS 26.6 85 0.0029 17.1 5.6 52 39-95 14-82 (99)
131 2e5h_A Zinc finger CCHC-type a 26.5 81 0.0028 16.9 6.5 51 39-94 17-76 (94)
132 3beg_B Splicing factor, argini 26.5 95 0.0033 17.7 6.1 58 40-102 18-78 (115)
133 1nu4_A U1A RNA binding domain; 26.2 84 0.0029 17.0 5.8 55 40-95 10-70 (97)
134 2cjk_A Nuclear polyadenylated 25.9 1.1E+02 0.0038 18.3 4.7 39 56-94 100-147 (167)
135 1p27_B RNA-binding protein 8A; 25.9 90 0.0031 17.2 5.6 50 41-95 26-84 (106)
136 2dgx_A KIAA0430 protein; RRM d 25.5 89 0.003 17.0 7.1 55 40-95 11-71 (96)
137 2dnp_A RNA-binding protein 14; 25.3 85 0.0029 16.7 7.5 54 37-95 8-62 (90)
138 2fy1_A RNA-binding motif prote 25.1 1E+02 0.0035 17.6 4.8 51 40-95 9-67 (116)
139 2xnq_A Nuclear polyadenylated 25.0 93 0.0032 17.0 6.4 51 41-95 25-76 (97)
140 1wf0_A TDP-43, TAR DNA-binding 24.9 84 0.0029 16.7 3.2 47 41-92 8-58 (88)
141 1l3k_A Heterogeneous nuclear r 24.8 1.3E+02 0.0044 18.6 4.5 54 39-97 14-76 (196)
142 2do4_A Squamous cell carcinoma 24.7 93 0.0032 16.9 5.9 51 40-95 19-77 (100)
143 2hvz_A Splicing factor, argini 24.3 96 0.0033 16.9 5.0 39 57-95 14-56 (101)
144 2ywk_A Putative RNA-binding pr 24.2 92 0.0031 16.7 4.9 51 39-94 17-75 (95)
145 2cq4_A RNA binding motif prote 23.8 1.1E+02 0.0036 17.3 4.1 38 56-93 38-84 (114)
146 1wex_A Hypothetical protein (r 23.8 1.1E+02 0.0037 17.3 6.0 51 39-94 16-69 (104)
147 2dgs_A DAZ-associated protein 23.6 98 0.0033 16.8 7.4 56 40-100 12-76 (99)
148 2cq3_A RNA-binding protein 9; 23.6 1E+02 0.0034 16.9 6.7 52 39-95 16-74 (103)
149 2voo_A Lupus LA protein; RNA-b 23.4 1E+02 0.0034 19.7 3.7 41 55-95 121-169 (193)
150 2cpi_A CCR4-NOT transcription 23.1 55 0.0019 18.6 2.2 56 40-100 17-88 (111)
151 2d9p_A Polyadenylate-binding p 23.0 1E+02 0.0035 16.9 5.8 54 37-95 14-74 (103)
152 1x5u_A Splicing factor 3B subu 22.6 1.1E+02 0.0036 16.9 7.7 51 40-95 17-76 (105)
153 3mdf_A Peptidyl-prolyl CIS-tra 22.0 96 0.0033 16.1 6.7 52 39-95 8-68 (85)
154 1x4h_A RNA-binding protein 28; 21.8 1.1E+02 0.0039 16.9 7.5 53 38-95 15-76 (111)
155 1whw_A Hypothetical protein ri 21.6 1.1E+02 0.0037 16.6 5.9 51 40-95 10-69 (99)
156 1oo0_B CG8781-PA, drosophila Y 21.4 1.2E+02 0.004 16.9 5.9 50 41-95 29-87 (110)
157 3tyt_A Heterogeneous nuclear r 21.2 1.7E+02 0.0059 18.7 5.5 50 40-94 6-60 (205)
158 2cqi_A Nucleolysin TIAR; RNA r 21.0 1.2E+02 0.0039 16.6 5.1 51 39-94 16-73 (103)
159 2cpj_A Non-POU domain-containi 20.9 1.1E+02 0.0039 16.6 3.8 51 40-95 17-70 (99)
160 2dnq_A RNA-binding protein 4B; 20.6 1.1E+02 0.0037 16.2 6.5 52 39-95 9-61 (90)
161 3n9u_C Cleavage and polyadenyl 20.5 1.6E+02 0.0054 18.0 4.9 40 56-95 68-118 (156)
162 2ytc_A PRE-mRNA-splicing facto 20.4 1.1E+02 0.0036 16.0 6.6 50 40-94 14-66 (85)
163 2cq2_A Hypothetical protein LO 20.2 1.4E+02 0.0048 17.4 7.5 55 36-95 23-82 (114)
No 1
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.85 E-value=2.8e-21 Score=144.37 Aligned_cols=113 Identities=31% Similarity=0.521 Sum_probs=94.1
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhh
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWK 111 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 111 (157)
+.||||+++|++||++++ ...+.+..+.+++++|||||++++++.++|+++||+++++|+.+++..|..++... ..+
T Consensus 10 kLPPGP~~lP~iGn~~~~--~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~-~~~ 86 (479)
T 3tbg_A 10 KLPPGPLPLPGLGNLLHV--DFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVP-ITQ 86 (479)
T ss_dssp CCCCCSCCBTTTBTGGGC--CTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCG-GGG
T ss_pred CCCCCCCCcCcccchHhh--cCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchH-HHH
Confidence 678999999999999887 45678889999999999999999999999999999999999998888888776654 333
Q ss_pred hhcc--CCcccccCCCCcchHHHhHhhhhhhcCcccccc
Q 031562 112 IISS--NQHDITSASYGTTWRVFRRNLSAEILHPLSCEI 148 (157)
Q Consensus 112 ~~~~--~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~ 148 (157)
.++. ...+++++.+|+.|+++|+++. +.|+...+..
T Consensus 87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~-~~~~~~~~~~ 124 (479)
T 3tbg_A 87 ILGFGPRSQGVFLARYGPAWREQRRFSV-STLRNLGLGK 124 (479)
T ss_dssp GGTCBTTBCCSTTCCSSHHHHHHHHHHH-HHHHHTTSTT
T ss_pred HhccCCCCCceeeCCCCHHHHHHHHHHH-HHhcchhhhH
Confidence 3321 2356667777999999999999 9998777643
No 2
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.84 E-value=3.3e-21 Score=144.71 Aligned_cols=121 Identities=24% Similarity=0.464 Sum_probs=94.7
Q ss_pred CCCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcch
Q 031562 30 KTNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPT 109 (157)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 109 (157)
+.+.||||+++|++||++.+.. ....+..+.+|+++||+++++++++.++|+++||+++++|+.+++..|.+++... .
T Consensus 6 ~~~~PPgP~~lPliGnl~~l~~-~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~-~ 83 (494)
T 3swz_A 6 GAKYPKSLLSLPLVGSLPFLPR-HGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMA-T 83 (494)
T ss_dssp ------CCBCCCEEEEESSCTT-SSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCH-H
T ss_pred CCCCCCCCCCCCeEcchHHhCC-CCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcH-H
Confidence 3467999999999999998732 2367889999999999999999999999999999999999998888898887654 4
Q ss_pred hhhhccCCcccccCCCCcchHHHhHhhhhhhcCc--ccccccccCC
Q 031562 110 WKIISSNQHDITSASYGTTWRVFRRNLSAEILHP--LSCEILQARP 153 (157)
Q Consensus 110 ~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~--~~l~~~~~~~ 153 (157)
.+.++.++.|++++.+|+.|+++|++++ +.|+. ..++.+.+++
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i 128 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKII 128 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHH
T ss_pred HHHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHH
Confidence 4555433467877777999999999999 99974 4455555544
No 3
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.84 E-value=1.2e-21 Score=147.19 Aligned_cols=119 Identities=13% Similarity=0.124 Sum_probs=93.1
Q ss_pred CCCCCCccCcccccccccccc-cCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh
Q 031562 32 NLPPGPFNVPLIGNLRWLLKS-FTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW 110 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 110 (157)
+.||||+++|++||++.+... ....+..+.+++++||+++++++++.+.++++||+.+++|+.+ +.|..++......
T Consensus 45 ~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~~~~ 122 (503)
T 3s79_A 45 SSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGSKLGL 122 (503)
T ss_dssp CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCHHHH
T ss_pred CCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchhhhhh
Confidence 679999999999999887321 1345678889999999999999999999999999999999953 4566665443222
Q ss_pred hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCC
Q 031562 111 KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARP 153 (157)
Q Consensus 111 ~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~ 153 (157)
...+..+.|++++.+|+.|+++|++++ +.|+..+++++.+.+
T Consensus 123 ~~~~~~~~~~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~ 164 (503)
T 3s79_A 123 QCIGMHEKGIIFNNNPELWKTTRPFFM-KALSGPGLVRMVTVC 164 (503)
T ss_dssp HHHTCTTSSSTTCCCHHHHHHHHHHHH-HHTSTHHHHHHHHHH
T ss_pred hhhccCCCceeeCCCccHHHHHHHhhh-HhhChHHHHHHHHHH
Confidence 333222367777777999999999999 999999988776544
No 4
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.83 E-value=1.5e-21 Score=146.11 Aligned_cols=114 Identities=23% Similarity=0.342 Sum_probs=94.7
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHc-CCCCCCCCCCcchh
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQN-GAIFADRPPPLPTW 110 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~-~~~~~~~~~~~~~~ 110 (157)
+.+|||+++|++|+++.+ ..+.+..+.+++++||+++++++++.++|+++||+.+++|+.++ ...|..++... ..
T Consensus 14 ~~~PGP~~~PliGn~~~~---~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~-~~ 89 (485)
T 3nxu_A 14 LGIPGPTPLPFLGNILSY---HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFG-PV 89 (485)
T ss_dssp HTCCCCCCBTTTBTGGGG---GGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCS-CC
T ss_pred CCCCCCCCcCeecCcHHh---hcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccc-cc
Confidence 459999999999999988 34688899999999999999999999999999999999999876 56676665443 22
Q ss_pred hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 111 KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 111 ~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
...+ +++++. +|+.|+++|++++ +.|+.++++.+.+.++
T Consensus 90 ~~~~---~~l~~~-~g~~w~~~R~~~~-~~fs~~~l~~~~~~i~ 128 (485)
T 3nxu_A 90 GFMK---SAISIA-EDEEWKRLRSLLS-PTFTSGKLKEMVPIIA 128 (485)
T ss_dssp GGGG---GSTTTC-CHHHHHHHHHHHG-GGGCHHHHHHHHHHHH
T ss_pred cccc---cCcccc-CCcHHHHHHhhcC-hhcCHHHHHHHHHHHH
Confidence 3333 666554 5999999999999 9999999998877654
No 5
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.81 E-value=2.6e-20 Score=140.09 Aligned_cols=110 Identities=29% Similarity=0.522 Sum_probs=74.2
Q ss_pred CCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh
Q 031562 31 TNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW 110 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 110 (157)
.+.||||+++|++|+++.+ ..+.+..+.+++++||+++++++++.++++++||+++++|+.+++..|.+++......
T Consensus 8 ~~~pPgP~~~P~iG~~~~~---~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~ 84 (507)
T 3pm0_A 8 KGKPPGPFAWPLIGNAAAV---GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFR 84 (507)
T ss_dssp -----------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHH
T ss_pred CCCCcCCCCCCeeCchhhc---CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHH
Confidence 3679999999999999887 3578999999999999999999999999999999999999988888888777665332
Q ss_pred hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccc
Q 031562 111 KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSC 146 (157)
Q Consensus 111 ~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l 146 (157)
...++ .+++++.+|+.|+++|++++ +.|+....
T Consensus 85 ~~~~g--~~l~~~~~g~~w~~~R~~~~-~~~~~~~~ 117 (507)
T 3pm0_A 85 VVSGG--RSMAFGHYSEHWKVQRRAAH-SMMRNFFT 117 (507)
T ss_dssp HGGGG--TCSSSSCSSHHHHHHHHHHH-HHHHHSTT
T ss_pred hhcCC--CceEECCCChHHHHHHHHHH-HHHHHhcC
Confidence 22232 67767767999999999999 87765443
No 6
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.80 E-value=7.9e-21 Score=141.72 Aligned_cols=117 Identities=13% Similarity=0.103 Sum_probs=96.6
Q ss_pred CCCCCCcc-CcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh
Q 031562 32 NLPPGPFN-VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW 110 (157)
Q Consensus 32 ~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 110 (157)
+.||+|++ +|++||++.+ ..+++.++.+++++|||||++++++.++|+++||+.+++|+.+++..|..++......
T Consensus 11 ~~PP~~~~~lP~iG~~~~~---~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~ 87 (461)
T 3ld6_A 11 KSPPYIFSPIPFLGHAIAF---GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLT 87 (461)
T ss_dssp CCCCBCCCSSTTTBTHHHH---HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHH
T ss_pred CCCCCCCCCcCeeeeHHHh---hhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhh
Confidence 45777775 8999999988 4578999999999999999999999999999999999999988777776665443333
Q ss_pred hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 111 KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 111 ~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
..+.+ .+++++.+|+.|+++|++++ +.|+.++++++.+.++
T Consensus 88 ~~~~g--~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~ 128 (461)
T 3ld6_A 88 TPVFG--KGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIE 128 (461)
T ss_dssp HHHHC--TTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHH
T ss_pred hccCC--CccccCCCcHHHHHHHHhcc-ccccHHHHhhhhHHHH
Confidence 44443 66667777999999999999 9999999988876653
No 7
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.80 E-value=2.6e-20 Score=139.75 Aligned_cols=115 Identities=20% Similarity=0.295 Sum_probs=87.4
Q ss_pred CCCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcch
Q 031562 30 KTNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPT 109 (157)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 109 (157)
+.+.||||++ ++++ ...+++..+.+++++|||++++++++.+.++++||+.+++|+.+++..|.+++.....
T Consensus 27 ~~~lPPGP~~------l~~~--~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~ 98 (496)
T 3qz1_A 27 NLHLPPLVPG------FLHL--LQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSY 98 (496)
T ss_dssp --CCCCBCSC------SCTT--SSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTT
T ss_pred CCCCCcCCcc------cccc--CCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchH
Confidence 3477899976 3333 3568899999999999999999999999999999999999998887788877655422
Q ss_pred hhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 110 WKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 110 ~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
..... +..|++++++|+.|+++|++++ +.|+...++.+.+.++
T Consensus 99 ~~~~~-~~~~l~~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~i~ 141 (496)
T 3qz1_A 99 KLVSQ-RCQDISLGDYSLLWKAHKKLTR-SALLLGTRSSMEPWVD 141 (496)
T ss_dssp TTSCT-TCCCSSSSCCSHHHHHHHHHHH-HHHHC--CCCHHHHHH
T ss_pred HHhcC-CCCceEECCCCHHHHHHHHHHH-HHHhhccHhhHHHHHH
Confidence 22222 2237766655999999999999 9999777777766553
No 8
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.78 E-value=1.1e-19 Score=135.71 Aligned_cols=121 Identities=20% Similarity=0.335 Sum_probs=93.9
Q ss_pred CCCCCCCCccCcccccccccccc--cCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCc
Q 031562 30 KTNLPPGPFNVPLIGNLRWLLKS--FTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPL 107 (157)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~ 107 (157)
+.+.+|||+++|++|+++.+... ....+..+.+++++||+++++++++.+.|+++||+++++|+.++ ..|.+++...
T Consensus 22 pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~~~ 100 (482)
T 3k9v_A 22 NVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRLEIK 100 (482)
T ss_dssp EGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCCCCH
T ss_pred CCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCCch
Confidence 45679999999999999887322 34688999999999999999999999999999999999999864 5677766543
Q ss_pred ch--hhhhccCCcccccCCCCcchHHHhHhhhhhhc-CcccccccccCC
Q 031562 108 PT--WKIISSNQHDITSASYGTTWRVFRRNLSAEIL-HPLSCEILQARP 153 (157)
Q Consensus 108 ~~--~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f-~~~~l~~~~~~~ 153 (157)
.. .....+.+.|+++. +|+.|+++||+++ +.| +.+.++.+.+.+
T Consensus 101 ~~~~~~~~~~~~~~l~~~-~g~~w~~~Rr~~~-~~f~~~~~~~~~~~~i 147 (482)
T 3k9v_A 101 PWKAYRDHRNEAYGLMIL-EGQEWQRVRSAFQ-KKLMKPVEIMKLDKKI 147 (482)
T ss_dssp HHHHHHHHHTCCCCTTTC-CHHHHHHHHHHHH-HHHTCHHHHGGGHHHH
T ss_pred HHHHHHHhcCCCCCceeC-CCchHHHHHHHhh-HHhcChHHHHHHHHHH
Confidence 21 11121123677555 5999999999999 876 677787776655
No 9
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.78 E-value=7.6e-20 Score=135.60 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=95.9
Q ss_pred CCCCCCCcc-CcccccccccccccCChHHHHHHHHHhhC-CeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcc
Q 031562 31 TNLPPGPFN-VPLIGNLRWLLKSFTEIEPILRNLHSKLG-PVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLP 108 (157)
Q Consensus 31 ~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yg-~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~ 108 (157)
.+.||||++ +|++||++.+ ..+.+..+.+++++|| +++++++++.++++++||+.+++++.++...|..++....
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~---~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~ 78 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQF---GKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSF 78 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHH---HHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGG
T ss_pred CCCCCCCCCCcchhccHHHH---ccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHH
Confidence 366899665 9999999888 3468889999999999 9999999999999999999999999877777766654332
Q ss_pred hhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 109 TWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 109 ~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
....++ .|+++..+|+.|+++|++++ +.|+.++++.+.+.++
T Consensus 79 ~~~~~g---~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~ 120 (450)
T 3gw9_A 79 MVPVFG---EGVAYAAPYPRMREQLNFLA-EELTIAKFQNFVPAIQ 120 (450)
T ss_dssp GHHHHC---TTSGGGSCHHHHHHHHHHHH-HTTSGGGCTTHHHHHH
T ss_pred HHHHhc---CCcccCCCcHHHHHHHHHHH-HHHhHHHHHHHHHHHH
Confidence 223333 66666667999999999999 9999999998877654
No 10
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.77 E-value=1.2e-18 Score=129.99 Aligned_cols=108 Identities=31% Similarity=0.553 Sum_probs=89.3
Q ss_pred CCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh
Q 031562 31 TNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW 110 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 110 (157)
.+.||||+++|++||++.+ ...+++..+.+++++||+++++++++.++++++||+.+++|+.++...|.+++... ..
T Consensus 9 ~~lpPgP~~~PliG~~~~~--~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~-~~ 85 (476)
T 3e6i_A 9 GKLPPGPFPLPIIGNLFQL--ELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLP-AF 85 (476)
T ss_dssp -CCCCCCCCBTTTBTGGGC--CTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCG-GG
T ss_pred CCCCcCCCCcccccChhhh--ccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCc-hh
Confidence 4679999999999999987 45678999999999999999999999999999999999999988877887776554 33
Q ss_pred hhhccCCcccccCCCCcchHHHhHhhhhhhcCccc
Q 031562 111 KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLS 145 (157)
Q Consensus 111 ~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~ 145 (157)
..+.+ +|+++++ |+.|+++|+++. +.|+...
T Consensus 86 ~~~~~--~~l~~~~-g~~w~~~Rr~~~-~~l~~~~ 116 (476)
T 3e6i_A 86 HAHRD--RGIIFNN-GPTWKDIRRFSL-TTLRNYG 116 (476)
T ss_dssp GGGTT--SSSTTCC-STTHHHHHHHHH-HHHHHTC
T ss_pred heecC--CCEEecC-CcHHHHHHHHHH-HHHHhcC
Confidence 33333 4775555 999999999988 8877543
No 11
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.76 E-value=8e-20 Score=136.16 Aligned_cols=119 Identities=12% Similarity=0.063 Sum_probs=94.9
Q ss_pred CCCCCCC-CccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcc
Q 031562 30 KTNLPPG-PFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLP 108 (157)
Q Consensus 30 ~~~~~pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~ 108 (157)
+.+.||| |+++|++||++.+ ..+.+.++.+++++||+++++++++.+.+++++++.+++++.++...+..+.....
T Consensus 9 ~~~~PPg~P~~lP~iG~l~~~---~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~ 85 (461)
T 3i3k_A 9 GVKSPPYIFSPIPFLGHAIAF---GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSR 85 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHH---HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHH
T ss_pred CCCCCCCCCCCCCccccHHhh---ccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHH
Confidence 3467999 8899999999888 34678899999999999999999999999999999999999876655544332221
Q ss_pred hhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 109 TWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 109 ~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
....+.+ .|+++..+|+.|+++|+++. +.|+.++++.|.+.++
T Consensus 86 ~~~~~~g--~g~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~ 128 (461)
T 3i3k_A 86 LTTPVFG--KGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIE 128 (461)
T ss_dssp HHHHHHC--TTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHH
T ss_pred hhhhhcC--CeeeeCCCcHHHHHHHHHHh-hhhCHHHHHHHHHHHH
Confidence 2223333 67767767999999999999 9999999988876653
No 12
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.75 E-value=2.3e-18 Score=129.46 Aligned_cols=107 Identities=25% Similarity=0.462 Sum_probs=85.9
Q ss_pred CCCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcch
Q 031562 30 KTNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPT 109 (157)
Q Consensus 30 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 109 (157)
+.+.+|||+++|++|+++.+ ..+++..+.+++++|||++++++++.++++++||+.+++|+.++...|.+++... .
T Consensus 14 ~lp~~PgP~~~p~~G~~~~~---~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~-~ 89 (495)
T 2hi4_A 14 GLKSPPEPWGWPLLGHVLTL---GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLY-T 89 (495)
T ss_dssp TCBCCCCCCCBTTTBTHHHH---TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCH-H
T ss_pred CCCCCCCCCCCcceeeHHhc---CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcH-H
Confidence 34556999999999999877 3468889999999999999999999999999999999999987666787666543 2
Q ss_pred hhhhccCCcccccC-CCCcchHHHhHhhhhhhcC
Q 031562 110 WKIISSNQHDITSA-SYGTTWRVFRRNLSAEILH 142 (157)
Q Consensus 110 ~~~~~~~~~~i~~~-~~g~~W~~~R~~~~~~~f~ 142 (157)
...+. .+.|++++ .+|+.|+++|++++ +.|+
T Consensus 90 ~~~~~-~~~~l~~~~~~g~~w~~~Rr~~~-~~f~ 121 (495)
T 2hi4_A 90 STLIT-DGQSLTFSTDSGPVWAARRRLAQ-NALN 121 (495)
T ss_dssp HHTST-TSCCTTTSSCCSHHHHHHHHHHH-HHHH
T ss_pred HHHhc-CCCCEEEcCCCChHHHHHHHHHH-HHHH
Confidence 23222 12677666 45999999999999 8864
No 13
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.74 E-value=2.2e-18 Score=129.01 Aligned_cols=116 Identities=25% Similarity=0.417 Sum_probs=91.3
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhh
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWK 111 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 111 (157)
+.||||+++|++|+++.+ ...+++..+.+++++||+++++++++.+.++++||+.+++|+.++...|.+++.......
T Consensus 10 ~~pPgP~~~p~iG~~~~~--~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~ 87 (476)
T 2fdv_A 10 KLPPGPTPLPFIGNYLQL--NTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW 87 (476)
T ss_dssp BCCCCCCCBTTTBTGGGC--CTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHH
T ss_pred CCCCCCCCCcccccHhhc--CCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhh
Confidence 468999999999999887 345788999999999999999999999999999999999999776667776554321222
Q ss_pred hhccCCcccccCCCCcchHHHhHhhhhhhcCcccc--cccccCC
Q 031562 112 IISSNQHDITSASYGTTWRVFRRNLSAEILHPLSC--EILQARP 153 (157)
Q Consensus 112 ~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l--~~~~~~~ 153 (157)
...+ .+++++ +|+.|+++|++++ +.|+...+ +.+.+.+
T Consensus 88 ~~~~--~~l~~~-~g~~~~~~Rr~~~-~~f~~~~~~~~~~~~~i 127 (476)
T 2fdv_A 88 VFKG--YGVVFS-NGERAKQLRRFSI-ATLRDFGVGKRGIEERI 127 (476)
T ss_dssp HHTT--CSSSSC-CHHHHHHHHHHHH-HHHHHTTTTSHHHHHHH
T ss_pred hcCC--CCeEec-CchHHHHHHHHHH-HHHHHhCCChhhHHHHH
Confidence 2222 677665 5999999999999 99987766 4555443
No 14
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.74 E-value=2.8e-18 Score=128.63 Aligned_cols=112 Identities=25% Similarity=0.440 Sum_probs=88.5
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhh
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWK 111 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 111 (157)
+.||||+++|++|++..+......++..+.+++++||+++++++++.++++++||+.+++|+.+++..|.+++... ...
T Consensus 12 ~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~-~~~ 90 (481)
T 3czh_A 12 GFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP-LFM 90 (481)
T ss_dssp CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCH-HHH
T ss_pred CCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcH-HHH
Confidence 5689999999999998873221127889999999999999999999999999999999999987767787765443 333
Q ss_pred hhccCCcccccCCCCcchHHHhHhhhhhhcCcccc
Q 031562 112 IISSNQHDITSASYGTTWRVFRRNLSAEILHPLSC 146 (157)
Q Consensus 112 ~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l 146 (157)
.+.+ ..|+++..+|+.|+++|++++ +.|+...+
T Consensus 91 ~~~~-~~~~~~~~~g~~w~~~R~~~~-~~f~~~~~ 123 (481)
T 3czh_A 91 KMTK-MGGLLNSRYGRGWVDHRRLAV-NSFRYFGY 123 (481)
T ss_dssp HHHT-TCSSTTCCSSHHHHHHHHHHH-HHHHHTTT
T ss_pred hhcC-CCCeEeCCCChHHHHHHHHHH-HHHHHhcC
Confidence 3332 146656667999999999999 99986544
No 15
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.73 E-value=2.2e-18 Score=128.96 Aligned_cols=115 Identities=28% Similarity=0.481 Sum_probs=89.8
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhh
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWK 111 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 111 (157)
+.||||+++|++|+++.+ ...+++..+.+++++||+++++++++.+.++++||+.+++|+.++...|.+++... ...
T Consensus 10 ~~pPgP~~~p~iG~~~~~--~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~-~~~ 86 (476)
T 1po5_A 10 KLPPGPSPLPVLGNLLQM--DRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIA-VVD 86 (476)
T ss_dssp CCCCCSCCBTTTBTGGGC--CTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGG-GGC
T ss_pred CCCcCCCCCCccccHHhc--cCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcH-HHH
Confidence 568999999999999887 34678899999999999999999999999999999999999977767777654322 222
Q ss_pred hhccCCcccccCCCCcchHHHhHhhhhhhcCccc--ccccccC
Q 031562 112 IISSNQHDITSASYGTTWRVFRRNLSAEILHPLS--CEILQAR 152 (157)
Q Consensus 112 ~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~--l~~~~~~ 152 (157)
.+. .+.|++++ +|+.|+++|++++ +.|+... ++.+.+.
T Consensus 87 ~~~-~~~~l~~~-~g~~w~~~Rr~~~-~~f~~~~~~~~~~~~~ 126 (476)
T 1po5_A 87 PIF-QGYGVIFA-NGERWRALRRFSL-ATMRDFGMGKRSVEER 126 (476)
T ss_dssp SCC-SSCCCCCS-SHHHHHHHHHHHH-HHHHHSCCCHHHHHHH
T ss_pred hhc-CCCceEec-CCcHHHHHHHHHH-HHHHHhCCChhHHHHH
Confidence 221 12577665 5999999999999 9998773 3444443
No 16
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.73 E-value=5.1e-18 Score=126.94 Aligned_cols=115 Identities=14% Similarity=0.167 Sum_probs=90.0
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh-
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW- 110 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~- 110 (157)
+.+|||+++|++|+++.+ .....+..+.+++++|||++++++++.+.++++||+.+++|+.+ ..|.+.. .....
T Consensus 3 ~~~PGP~~~p~iG~l~~~--~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~--~~f~~~~-~~~~~~ 77 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLL--NTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE--SRFDKNL-SQALKF 77 (470)
T ss_dssp CCCCCCCCCGGGTTGGGG--CSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCT--TTEEECC-CHHHHH
T ss_pred CCCCCCCCCCccccHHHH--hcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhh--cCcCcCc-hhHHHH
Confidence 568999999999999887 34567888999999999999999999999999999999999943 3453322 11111
Q ss_pred -hhhccCCcccccC-CCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 111 -KIISSNQHDITSA-SYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 111 -~~~~~~~~~i~~~-~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
....+ .|+++. .+|+.|+++|++++ |.|++++++.+.+.++
T Consensus 78 ~~~~~~--~~l~~~~~~g~~w~~~Rr~~~-~~fs~~~l~~~~~~i~ 120 (470)
T 2ij2_A 78 VRDFAG--DGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMV 120 (470)
T ss_dssp HHHHHT--TSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHH
T ss_pred HHHhcC--CceEEcCCCchHHHHHHHHhc-cccCHHHHHHHHHHHH
Confidence 11122 677665 46999999999999 9999999998877653
No 17
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.73 E-value=3.1e-18 Score=128.12 Aligned_cols=116 Identities=29% Similarity=0.489 Sum_probs=84.8
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhh
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWK 111 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 111 (157)
+.||||+++|++|+++.+ ...+++..+.+++++||+++++++++.+.++++||+.+++|+.++...|.+++.......
T Consensus 11 ~~pPgP~~~p~iG~~~~~--~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~ 88 (477)
T 1r9o_A 11 KLPPGPTPLPVIGNILQI--GIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAER 88 (477)
T ss_dssp BCCCCSSSCC-----CCB--CHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCT
T ss_pred CCCCCCCCCceeccHhhc--CCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhh
Confidence 468999999999999887 234678899999999999999999988999999999999999776667776543321112
Q ss_pred hhccCCcccccCCCCcchHHHhHhhhhhhcCcc--cccccccCC
Q 031562 112 IISSNQHDITSASYGTTWRVFRRNLSAEILHPL--SCEILQARP 153 (157)
Q Consensus 112 ~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~--~l~~~~~~~ 153 (157)
...+ .|++++ +|+.|+++|+++. +.|+.. .++.+.+.+
T Consensus 89 ~~~~--~~l~~~-~g~~w~~~Rr~~~-~~~~~~~~~~~~~~~~i 128 (477)
T 1r9o_A 89 ANRG--FGIVFS-NGKKWKEIRRFSL-MTLRNFGMGKRSIEDRV 128 (477)
T ss_dssp TTCT--TSSTTC-CHHHHHHHHHHHH-HHHTTSSSCSSCHHHHH
T ss_pred ccCC--CceEec-CChHHHHHHHHHH-HHHHHhCCChHHHHHHH
Confidence 2222 577555 5999999999999 999887 344454443
No 18
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.70 E-value=8.6e-18 Score=125.85 Aligned_cols=122 Identities=13% Similarity=0.146 Sum_probs=91.8
Q ss_pred CCCCCCCCCccCccccccccccc--ccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCC
Q 031562 29 YKTNLPPGPFNVPLIGNLRWLLK--SFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPP 106 (157)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~ 106 (157)
.+.+.+|||+..++. +++.+.. .....+..+.+++++||||+++++++.+.|+++||+++++|+.++ +.|.+++..
T Consensus 6 ~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~~~ 83 (487)
T 3n9y_A 6 RPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPERFLI 83 (487)
T ss_dssp BCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCCCCC
T ss_pred CCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCCCCC
Confidence 345679999887765 5555421 234688899999999999999999999999999999999999765 467777654
Q ss_pred cchh--hhhccCCcccccCCCCcchHHHhHhhhhh-hcCcccccccccCCC
Q 031562 107 LPTW--KIISSNQHDITSASYGTTWRVFRRNLSAE-ILHPLSCEILQARPQ 154 (157)
Q Consensus 107 ~~~~--~~~~~~~~~i~~~~~g~~W~~~R~~~~~~-~f~~~~l~~~~~~~~ 154 (157)
.... ....+.+.|+++ .+|+.|+++|++++ + .|+.++++.+.+.++
T Consensus 84 ~~~~~~~~~~~~~~~l~~-~~g~~w~~~Rr~l~-~~~fs~~~l~~~~~~i~ 132 (487)
T 3n9y_A 84 PPWVAYHQYYQRPIGVLL-KKSAAWKKDRVALN-QEVMAPEATKNFLPLLD 132 (487)
T ss_dssp HHHHHHHHHTTCCCCGGG-CCHHHHHHHHHHHH-HHHTSHHHHTTHHHHHH
T ss_pred cHHHHHHHHccccCCCcc-CCcHHHHHHHHhcC-cccCCchHHHHhhhHHH
Confidence 3221 112212367754 45999999999999 8 599999999887664
No 19
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.68 E-value=8.1e-18 Score=125.63 Aligned_cols=113 Identities=15% Similarity=0.195 Sum_probs=74.3
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCC-CCCCCcchh
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFA-DRPPPLPTW 110 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~-~~~~~~~~~ 110 (157)
..||||+++|++|+++.+ ..+++.++.++++ |||++++++++.++++++||+.+++|+.++ .|. +++......
T Consensus 23 eppPgP~~~P~iG~~~~~---~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~ 96 (467)
T 3dbg_A 23 EPPVAGGGVPLLGHGWRL---ARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLE 96 (467)
T ss_dssp BCCEECCCCSTTHHHHHH---HHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-----------
T ss_pred CCCCCCCCCCcccchHHh---ccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHH
Confidence 568999999999999988 3467888888887 999999999999999999999999999765 563 332222122
Q ss_pred hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 111 KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 111 ~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
...+. +++++ .+|+.|+++|++++ +.|+.++++.+.+.++
T Consensus 97 ~~~g~--~~l~~-~dg~~h~~~R~~l~-~~fs~~~l~~~~~~i~ 136 (467)
T 3dbg_A 97 GLLGK--EGVAT-ANGPLHRRQRRTIQ-PAFRLDAIPAYGPIME 136 (467)
T ss_dssp ----------------------CGGGH-HHHSTTTSTTTHHHHH
T ss_pred HhcCC--CCccc-CCcHHHHHHHHHhh-hhhCHHHHHHHHHHHH
Confidence 23332 56644 55999999999999 9999999999877653
No 20
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.68 E-value=8.7e-18 Score=124.85 Aligned_cols=115 Identities=19% Similarity=0.362 Sum_probs=88.8
Q ss_pred CCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh
Q 031562 31 TNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW 110 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 110 (157)
.+.||||+++|++|+++.+.. +++ .+.+++++||+++++++++.+.++++||+.+++|+.+++..|.... .....
T Consensus 11 ~~~pPgp~~~P~iG~~~~~~~---~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~-~~~~~ 85 (444)
T 2ve3_A 11 LPIPPGDFGLPWLGETLNFLN---DGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATW-PLSTR 85 (444)
T ss_dssp CCCCCCCCCBTTTBTHHHHHH---CTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEEC-CHHHH
T ss_pred CCCCCCCCCCCccccHHHHhc---CcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccch-hHHHH
Confidence 367999999999999988732 234 6779999999999999888899999999999999976555554221 11122
Q ss_pred hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 111 KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 111 ~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
..++. .++++ .+|+.|+++|++++ +.|++++++.+.+.++
T Consensus 86 ~~~g~--~~l~~-~~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~ 125 (444)
T 2ve3_A 86 ILLGP--NALAT-QMGEIHRSRRKILY-QAFLPRTLDSYLPKMD 125 (444)
T ss_dssp HHHCT--TSGGG-CCHHHHHHHHHHHH-GGGCHHHHHTTHHHHH
T ss_pred HHhCc--ccccc-CCchHHHHHHHHHH-hhcCHHHHHHHHHHHH
Confidence 33332 37755 45999999999999 9999999998877654
No 21
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.68 E-value=3.5e-18 Score=128.27 Aligned_cols=116 Identities=21% Similarity=0.180 Sum_probs=90.6
Q ss_pred CCCCCCCCcc-CcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcc
Q 031562 30 KTNLPPGPFN-VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLP 108 (157)
Q Consensus 30 ~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~ 108 (157)
..+.||||++ +|++|+++.+ ..+++.++.+++++|||++++++++.++++++||+.+++|+.++. .+........
T Consensus 11 ~~~~PPgp~~~lPliG~~~~~---~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~-~~~~~~~~~~ 86 (491)
T 3v8d_A 11 QTGEPPLENGLIPYLGCALQF---GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGK-YFDWKKFHFA 86 (491)
T ss_dssp CTTSCCEEEEEESSTTTTGGG---TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCT-TEESSHHHHH
T ss_pred CCCCCCCCCCCcceeccHHHH---hcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCC-ccchHHHHHH
Confidence 3477999999 6999999998 568999999999999999999999999999999999999995433 1322221111
Q ss_pred -hhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCC
Q 031562 109 -TWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARP 153 (157)
Q Consensus 109 -~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~ 153 (157)
....++ .+.+...+|+.|+++|+.+. +.|++++++.+.+.+
T Consensus 87 ~~~~~~g---~~~~~~~~g~~~~~~Rr~~~-~~f~~~~l~~~~~~i 128 (491)
T 3v8d_A 87 LSAKAFG---HRSIDPMDGNTTENINDTFI-KTLQGHALNSLTESM 128 (491)
T ss_dssp HHHHHHT---CCCCCGGGSSBCCCHHHHHH-HHHSHHHHHHHHHHH
T ss_pred HHHHhcC---CcccccccchhHHHHHHHHH-HHcCccchHHHHHHH
Confidence 233444 33334445999999999999 999999998887655
No 22
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.68 E-value=2.4e-17 Score=122.78 Aligned_cols=114 Identities=11% Similarity=-0.015 Sum_probs=74.6
Q ss_pred CCCCC-CccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh
Q 031562 32 NLPPG-PFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW 110 (157)
Q Consensus 32 ~~~pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 110 (157)
+.||| |+++|++|+++.+ ..+++..+.+++++||+++++++++.++++++||+.+++|+.+++..|.+++... ..
T Consensus 4 ~~PPg~p~~~P~iG~~~~~---~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~-~~ 79 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEF---RTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYP-FM 79 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHH---TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCG-GG
T ss_pred CCCCCCCCCCCCccCHHHH---hhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchh-HH
Confidence 55887 7789999999887 3468889999999999999999999999999999999999977666676665442 33
Q ss_pred hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 111 KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 111 ~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
..+.+ .++ +. +|+.|+++|++++ +.|++++++.+.+.++
T Consensus 80 ~~~~g--~~~-~~-~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~ 118 (455)
T 2cib_A 80 TPIFG--EGV-VF-DASPERRKEMLHN-AALRGEQMKGHAATIE 118 (455)
T ss_dssp HHHHC-------------------------CCHHHHHHHHHHHH
T ss_pred HhhcC--Ccc-cc-CcHHHHHHHhhhc-cccCHHHHHHHHHHHH
Confidence 22332 455 33 4999999999999 9999999988876653
No 23
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.66 E-value=3.3e-17 Score=121.65 Aligned_cols=114 Identities=16% Similarity=0.116 Sum_probs=80.6
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEec-CCccEEEEeCHHHHHHHHHHcCCCCCCCCC--Ccc
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYV-GPRPAIFIADRSLAHKALVQNGAIFADRPP--PLP 108 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~-~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~--~~~ 108 (157)
+.+|||+++|++|++... ...+++..+.++ ++|||++++++ ++.++++++|++.+++|+.++ .|.+++. ...
T Consensus 26 ~~~PGP~~~p~lG~~~~~--~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~ 100 (436)
T 2cd8_A 26 QGTTASPPVLDLGALGQD--FAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTP 100 (436)
T ss_dssp --------CCBHHHHHHH--HHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSC
T ss_pred cCCCCCCccccCCCCCcc--cccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccccc
Confidence 559999999999998632 134678889999 89999999998 778899999999999999754 5665542 111
Q ss_pred hh--hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 109 TW--KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 109 ~~--~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.. ....+ +++++ .+|+.|+++|++++ +.|++++++.+.+.++
T Consensus 101 ~~~~~~~~~--~~l~~-~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 144 (436)
T 2cd8_A 101 LTEAEAALN--HNMLE-SDPPRHTRLRKLVA-REFTMRRVELLRPRVQ 144 (436)
T ss_dssp CCTTGGGTC--CSGGG-CCTTHHHHHHHHHG-GGSSHHHHHTTHHHHH
T ss_pred ccccccccc--ccccc-cCchHHHHHHHHhH-HhhCHHHHHHHHHHHH
Confidence 11 01122 66655 55999999999999 9999999998877654
No 24
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.57 E-value=1.7e-16 Score=116.17 Aligned_cols=110 Identities=13% Similarity=0.096 Sum_probs=86.5
Q ss_pred CCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhhhhc
Q 031562 35 PGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWKIIS 114 (157)
Q Consensus 35 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 114 (157)
++++..|++|+++.+ ..+++..+.+++++|||+++ ++++.+.++++||+.+++|+.++ .|.+++........+.
T Consensus 2 ~~~~~~p~iGnl~~~---~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~ 75 (389)
T 1n97_A 2 KRLSLREAWPYLKDL---QQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT 75 (389)
T ss_dssp EECCHHHHHHHHHHH---HHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH
T ss_pred cccccccccccHHHH---hhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh
Confidence 345667999999887 23678899999999999999 88889999999999999999765 6766541221222233
Q ss_pred cCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 115 SNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 115 ~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+ .++++. ||+.|+++|++++ +.|++++++.+.+.++
T Consensus 76 g--~~l~~~-~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 111 (389)
T 1n97_A 76 G--RGLLTD-WGESWKEARKALK-DPFLPKNVRGYREAME 111 (389)
T ss_dssp C--SSTTTC-CHHHHHHHHHHHC-GGGSHHHHHTTHHHHH
T ss_pred C--CccccC-CcHHHHHHHHHhC-cccCHHHHHHHHHHHH
Confidence 3 677555 5999999999999 9999999998877653
No 25
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.55 E-value=3.6e-16 Score=117.13 Aligned_cols=114 Identities=22% Similarity=0.186 Sum_probs=85.3
Q ss_pred CCCCCCCcc-CcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcch
Q 031562 31 TNLPPGPFN-VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPT 109 (157)
Q Consensus 31 ~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 109 (157)
.+.||||++ +|++|+++.+ ..+++..+.+++++||+++++++++.++++++||+.+++|+.++.. +..++.....
T Consensus 12 ~~~pPgp~~~~P~iG~~~~~---~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~~~ 87 (491)
T 3dax_A 12 TGEPPLENGLIPYLGCALQF---GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHFAT 87 (491)
T ss_dssp TTCCCEEEEEESCTTTTGGG---TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHHHH
T ss_pred CCCCCcCCCcccchhhHHHH---hhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHHHH
Confidence 356899888 7999999887 3468889999999999999999999999999999999999965431 2222111112
Q ss_pred h-hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccC
Q 031562 110 W-KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQAR 152 (157)
Q Consensus 110 ~-~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~ 152 (157)
. ..++ .+++...+|+.|+++|+.+. +.|+.++++.+.+.
T Consensus 88 ~~~~~g---~~~~~~~~g~~w~~~r~~~~-~~f~~~~l~~~~~~ 127 (491)
T 3dax_A 88 SAKAFG---HRSIDPMDGNTTENINDTFI-KTLQGHALNSLTES 127 (491)
T ss_dssp HHHHHT---CCCCCGGGTSBCCCHHHHHH-HHHSHHHHHHHHHH
T ss_pred HHHHcC---CCcccccchhHHHHHHHHHH-HhcCcccHHHHHHH
Confidence 2 2333 45442344899999999999 99999888776543
No 26
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.51 E-value=1.3e-14 Score=106.61 Aligned_cols=111 Identities=12% Similarity=-0.006 Sum_probs=76.7
Q ss_pred CCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecC-CccEEEEeCHHHHHHHHHHcC-CCCCCCCCCcchhh
Q 031562 34 PPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG-PRPAIFIADRSLAHKALVQNG-AIFADRPPPLPTWK 111 (157)
Q Consensus 34 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-~~~~i~i~~p~~~~~i~~~~~-~~~~~~~~~~~~~~ 111 (157)
||||+++|+.|++.. +++..+.++. +|||++++.++ +.+.+++++++.+++++.++. ..+..++.......
T Consensus 3 pPGp~~~P~~g~~~~------~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~ 75 (404)
T 1jfb_A 3 ASGAPSFPFSRASGP------EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSA 75 (404)
T ss_dssp ---CCBSSCCCSSTT------SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSH
T ss_pred CCCCCCCCCCCCcCC------CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccc
Confidence 899999999999754 4566777775 59999999875 667778999999999997642 22322222211111
Q ss_pred ----hhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 112 ----IISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 112 ----~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
... +..++++. +|+.|+++|++++ +.|++++++.+.+.++
T Consensus 76 ~~~~~~~-~~~~l~~~-~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 119 (404)
T 1jfb_A 76 SGKQAAK-AKPTFVDM-DPPEHMHQRSMVE-PTFTPEAVKNLQPYIQ 119 (404)
T ss_dssp HHHHHTT-SCCCGGGC-CTTHHHHHHTTTG-GGGSHHHHHHHHHHHH
T ss_pred cccchhc-ccCccccc-CchhHHHHHHHhh-hhcCHHHHHHHHHHHH
Confidence 111 12456454 5999999999999 9999999998877654
No 27
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.49 E-value=3.2e-15 Score=112.31 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=79.2
Q ss_pred CCCCCCCcc-CcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcch
Q 031562 31 TNLPPGPFN-VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPT 109 (157)
Q Consensus 31 ~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 109 (157)
.+.||||++ +|++|+++.+. .+.+..+.+++++||++|++++++.++++++||+.+++|+.++...+..++.....
T Consensus 17 ~~~PPgp~~~~P~iG~~~~~~---~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~ 93 (498)
T 3b6h_A 17 PGEPPLDLGSIPWLGYALDFG---KDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFL 93 (498)
T ss_dssp TTCCCEECCSSTTTBTHHHHH---HCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHH
T ss_pred CCCCCCCCCCCcchhhHHHhc---cCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHH
Confidence 366899998 89999998873 35788999999999999999999999999999999999996544323322211112
Q ss_pred hhhhccCCcccccCCCCcchHHHhHhhhhhhcCccccccccc
Q 031562 110 WKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQA 151 (157)
Q Consensus 110 ~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~ 151 (157)
.....+ .+++.. +|+.| |++.. +.|+.++++.+.+
T Consensus 94 ~~~~~g--~~~~~~-~~~~~---rr~~~-~~~~~~~l~~~~~ 128 (498)
T 3b6h_A 94 MERIFD--VQLPHY-SPSDE---KARMK-LTLLHRELQALTE 128 (498)
T ss_dssp HHHTSC--CCCTTC-CHHHH---HHHHH-TTSSHHHHHHHHH
T ss_pred HHHHcC--CCcccc-CHHHH---HHHHH-HhhchHhHHHHHH
Confidence 222222 455443 46666 45666 7888877776643
No 28
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.47 E-value=2.3e-14 Score=106.52 Aligned_cols=99 Identities=13% Similarity=0.162 Sum_probs=75.1
Q ss_pred cCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcch-hhhhcc--CCcccccCCCCcch
Q 031562 53 FTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPT-WKIISS--NQHDITSASYGTTW 129 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~--~~~~i~~~~~g~~W 129 (157)
...++..+.+|+++|||++++++++.+.|+++||+.+++|+.+ +.|.+++..+.. ....+. .+.|+++..+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 4567889999999999999999999999999999999999953 345444322111 111110 12577666679999
Q ss_pred HHHhHhhhhhhcCcccccccccCCC
Q 031562 130 RVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 130 ~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+++|++++ +.|+.++++.+.+.++
T Consensus 87 ~~~Rr~~~-~~fs~~~l~~~~~~i~ 110 (456)
T 3mdm_A 87 HKQRRVID-LAFSRSSLVSLMETFN 110 (456)
T ss_dssp HHHHHHHG-GGGSHHHHHTTHHHHH
T ss_pred HHHHhhcc-cccCHHHHHHHHHHHH
Confidence 99999999 9999999998877653
No 29
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.47 E-value=3.4e-15 Score=111.47 Aligned_cols=112 Identities=15% Similarity=0.116 Sum_probs=80.9
Q ss_pred CCCCCCCcc-CcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcch
Q 031562 31 TNLPPGPFN-VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPT 109 (157)
Q Consensus 31 ~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 109 (157)
.+.||||++ +|++||++.+ ..+++..+.+++++|||++++++++.++++++|++.+++|+.++.. +..++.....
T Consensus 17 ~~~pPgp~~~~P~iG~~~~~---~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~~ 92 (475)
T 3b98_A 17 RNEPPLDKGMIPWLGHALEF---GKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQVL 92 (475)
T ss_dssp TTCCCEECCSSTTTBTHHHH---HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHHH
T ss_pred CCCCCCCCCCcchHHhHHHH---hhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHHH
Confidence 467999998 8999999887 3468899999999999999999999999999999999999965432 3222211112
Q ss_pred hhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCC
Q 031562 110 WKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARP 153 (157)
Q Consensus 110 ~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~ 153 (157)
...+.+ .+++.. +|+.| |+++. +.|+.++++.+.+.+
T Consensus 93 ~~~~~g--~~~~~~-~~~~~---R~~~~-~~f~~~~l~~~~~~~ 129 (475)
T 3b98_A 93 MKRIFN--MILPSH-NPESE---KKRAE-MHFQGASLTQLSNSM 129 (475)
T ss_dssp HHHTTC--CCCTTC-CHHHH---HHHHH-HHTSHHHHHHHHHHH
T ss_pred HHHHhC--CCCCCC-ChHHH---HHHHH-HHcChhhHHHHHHHH
Confidence 222222 455443 46655 67778 899998888776543
No 30
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.46 E-value=1.4e-14 Score=106.82 Aligned_cols=106 Identities=13% Similarity=0.056 Sum_probs=79.3
Q ss_pred cccccccccccccCChHHHHHHHHHhhC-CeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCc-chhhhhccCCc
Q 031562 41 PLIGNLRWLLKSFTEIEPILRNLHSKLG-PVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPL-PTWKIISSNQH 118 (157)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yg-~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~ 118 (157)
|++|+...+. .+++.++.+++++|| |++++.+++.+.+++++++.++.++ +.+.|.+.+... .....+.+ .+
T Consensus 9 P~lG~~~~~~---~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~g-~~ 82 (417)
T 1izo_A 9 KSLDNSLTLL---KEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY--DTDRFQRQNALPKRVQKSLFG-VN 82 (417)
T ss_dssp CCTTHHHHHH---HHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT--CTTTEECTTCSCHHHHTTTTC-TT
T ss_pred CccchHHHHh---hCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh--cccccccccccccchhhhhcc-cc
Confidence 8899998873 356789999999998 9999998889999999999998654 234455443222 12222221 14
Q ss_pred ccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 119 DITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 119 ~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+++ ..||+.|+++|++++ +.|++++++.+.+.++
T Consensus 83 ~l~-~~dg~~h~~~R~~~~-~~f~~~~l~~~~~~i~ 116 (417)
T 1izo_A 83 AIQ-GMDGSAHIHRKMLFL-SLMTPPHQKRLAELMT 116 (417)
T ss_dssp CGG-GCCHHHHHHHHHHHH-HTSSHHHHHHHHHHHH
T ss_pred cee-ecCChHHHHHHHHhh-hhcCHHHHHHHHHHHH
Confidence 564 455999999999999 9999999998877653
No 31
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.45 E-value=8.2e-14 Score=102.69 Aligned_cols=115 Identities=12% Similarity=0.053 Sum_probs=78.5
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhh-CCeEEEec-CCccEEEEeCHHHHHHHHHHcCCCCCCCCC---C
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKL-GPVFTLYV-GPRPAIFIADRSLAHKALVQNGAIFADRPP---P 106 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-g~i~~~~~-~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~---~ 106 (157)
+.+|+|++.|.+.....+ ..+++..+.++ ++| ||++++++ ++.+.++++|++.+++|+.++ .|.+++. .
T Consensus 5 ~~~~~~~~~P~~~~~~~~---~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~ 78 (412)
T 2zbx_A 5 ATTPQTTDAPAFPSNRSC---PYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDNF 78 (412)
T ss_dssp ---CCCCSSCBSSCCCSS---TTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTTS
T ss_pred CCCCCCCCCCCCCCCchh---ccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCcccccc
Confidence 457777777765332233 44678889999 777 99999998 788999999999999999653 3433332 1
Q ss_pred cchh--hh-hccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 107 LPTW--KI-ISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 107 ~~~~--~~-~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.... .. +....+++++ .+|+.|+++|++++ +.|+.++++.+.+.++
T Consensus 79 ~~~~~~~~~~~~~~~~l~~-~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 127 (412)
T 2zbx_A 79 PATSPRFEAVRESPQAFIG-LDPPEHGTRRRMTI-SEFTVKRIKGMRPEVE 127 (412)
T ss_dssp CCCSGGGC----CCCCGGG-CCTTHHHHHHTTTG-GGGSHHHHHHHHHHHH
T ss_pred ccccccccccccccccccc-CCcHHHHHHHHHhh-hhcCHHHHHHHHHHHH
Confidence 1010 00 1001146655 46999999999999 9999999998877654
No 32
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.44 E-value=6e-14 Score=103.22 Aligned_cols=110 Identities=14% Similarity=0.037 Sum_probs=79.3
Q ss_pred CCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEe----c-CC-ccEEEEeCHHHHHHHHHHcCCCCCCCC
Q 031562 31 TNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLY----V-GP-RPAIFIADRSLAHKALVQNGAIFADRP 104 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~----~-~~-~~~i~i~~p~~~~~i~~~~~~~~~~~~ 104 (157)
.+.||||+++|+. + ..+++..+.++ ++|||+++++ + ++ .+.++++|++.+++|+..+. .|.+++
T Consensus 9 ~~lppgp~~~p~~-----~---~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~-~~~~~~ 78 (406)
T 1ued_A 9 APLLREPANFQLR-----T---NCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE-HFTTRP 78 (406)
T ss_dssp CCEEECCTTTTCE-----E---TTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS-SEECCC
T ss_pred CCCcccCcccCCC-----C---CCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc-cccccc
Confidence 3567889888765 2 33567788899 9999999999 6 78 89999999999999993222 354443
Q ss_pred CCc----chhh-hhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 105 PPL----PTWK-IISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 105 ~~~----~~~~-~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
... .... ...+ +++++. +|+.|+++|++++ +.|++++++.+.+.++
T Consensus 79 ~~~~~~~~~~~~~~~~--~~l~~~-~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~ 129 (406)
T 1ued_A 79 QFTQSKSGAHVEAQFV--GQISTY-DPPEHTRLRKMLT-PEFTVRRIRRMEPAIQ 129 (406)
T ss_dssp CC---------CGGGT--TCGGGC-CTTHHHHHHHHHG-GGSSHHHHHHHHHHHH
T ss_pred cccccccccccccccc--cccccC-CCHHHHHHHHHhh-hhhCHHHHHHHHHHHH
Confidence 211 0111 1122 566554 6999999999999 9999999988877654
No 33
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.40 E-value=6.4e-14 Score=103.22 Aligned_cols=110 Identities=13% Similarity=0.072 Sum_probs=78.2
Q ss_pred CCCCccCcccccccccccccCChHHHHHHHHHhh-CCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCc-chhh
Q 031562 34 PPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKL-GPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPL-PTWK 111 (157)
Q Consensus 34 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-g~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~-~~~~ 111 (157)
|||| |++|++..+. .+++.++.+++++| ||++++..++.+.+++++++.++ ++.+ .+.|.+.+... ....
T Consensus 4 pPg~---P~iG~~~~~~---~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~-~~~f~~~~~~~~~~~~ 75 (415)
T 3awm_A 4 TPHT---KGPDETLSLL---ADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYD-TTRFEREGAMPVAIQK 75 (415)
T ss_dssp --------CCCCHHHHH---HSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTC-TTTEECTTCSCHHHHT
T ss_pred CCCC---CccchHHHHH---hChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhc-ccccccccccchhhhh
Confidence 5666 7899998873 35778999999999 79999998888999999999986 6643 34565543222 1222
Q ss_pred hhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 112 IISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 112 ~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.+.+ .++++ ..||+.|+++|++++ +.|++++++.+.+.++
T Consensus 76 ~~~g-~~~l~-~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 115 (415)
T 3awm_A 76 TLLG-QGGVQ-GLDGETHRHRKQMFM-GLMTPERVRALAQLFE 115 (415)
T ss_dssp TTSC-SSSGG-GCCHHHHHHHHHHHH-TTCCHHHHHHHHHHHH
T ss_pred hccC-Cccee-ecCcHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Confidence 2221 24564 455999999999999 9999999998876653
No 34
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.40 E-value=9.3e-14 Score=104.28 Aligned_cols=121 Identities=11% Similarity=0.106 Sum_probs=83.4
Q ss_pred CCCCCCCCCccCccccccccccc--ccCChHHHHHHHHHhhCC-eEEEecCCccE-------EEEeCHHHHHHHHHHcC-
Q 031562 29 YKTNLPPGPFNVPLIGNLRWLLK--SFTEIEPILRNLHSKLGP-VFTLYVGPRPA-------IFIADRSLAHKALVQNG- 97 (157)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~~yg~-i~~~~~~~~~~-------i~i~~p~~~~~i~~~~~- 97 (157)
.+.+.||||.++|++|++..+.. ...+++.++.++.++||+ ||++++++.++ +++++++..+.++....
T Consensus 25 ~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v 104 (495)
T 3dsk_A 25 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKV 104 (495)
T ss_dssp CCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTE
T ss_pred CCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccccc
Confidence 34567999999999999987731 246889999999999999 99999998888 67777776666653211
Q ss_pred ---CCCCCCCCCcchhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCC
Q 031562 98 ---AIFADRPPPLPTWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARP 153 (157)
Q Consensus 98 ---~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~ 153 (157)
+.+....... . ..+++.....++..+|+.|+++|++++ +.|+... +.+.+.+
T Consensus 105 ~k~~~~~~~~~~~-~-~l~g~~~~~~~~~~~g~~h~~~R~~~~-~~f~~~~-~~~~~~i 159 (495)
T 3dsk_A 105 EKKDLLTGTYMPS-T-ELTGGYRILSYLDPSEPKHEKLKNLLF-FLLKSSR-NRIFPEF 159 (495)
T ss_dssp ECSSCTTSSSCCC-G-GGGTTCCCGGGCCTTSHHHHHHHHHHH-HHHHHTT-TTHHHHH
T ss_pred cccccccccCCCC-c-cccCCCcceeeeCCCchHHHHHHHHHH-HHHHHHH-HHHHHHH
Confidence 1121111111 2 444432122334456999999999999 9998754 6665544
No 35
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.36 E-value=6.8e-13 Score=97.61 Aligned_cols=112 Identities=13% Similarity=0.140 Sum_probs=81.0
Q ss_pred CCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEec-CCcc-EEEEeCHHHHHHHHHHcCCCCCCCCCCcch
Q 031562 32 NLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYV-GPRP-AIFIADRSLAHKALVQNGAIFADRPPPLPT 109 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~-~~~~-~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 109 (157)
+.+|+|+.+|+.++. ..+++..+.+++ +|||++++.+ ++.+ .++++|++.+++|+.+ +.|.+++.....
T Consensus 8 ~~~~~~~~~p~~~~~------~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~ 78 (406)
T 1s1f_A 8 QAVPPVRDWPAVDLP------GSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQ 78 (406)
T ss_dssp CCSCCEEECCCCCCC------TTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTT
T ss_pred hhccCCCCCCCCccc------ccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCC
Confidence 567888877776662 345667777775 7999999996 5666 9999999999999964 457665432211
Q ss_pred ---hhh-hccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 110 ---WKI-ISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 110 ---~~~-~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
... ..+..+++++. +|+.|+++|++++ +.|++++++.+.+.++
T Consensus 79 ~~~~~~~~~~~~~~l~~~-dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 125 (406)
T 1s1f_A 79 VTRLAPHFIPARGAVGFL-DPPDHTRLRRSVA-AAFTARGVERVRERSR 125 (406)
T ss_dssp BCBSSSSCSSCTTSGGGC-CTTHHHHHHHHHH-HHHSHHHHHHHHHHHH
T ss_pred cccccccccccccccccC-CchHHHHHHHHHH-HhhCHHHHHHHHHHHH
Confidence 111 21112677555 5999999999999 9999999998877653
No 36
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.35 E-value=8.3e-13 Score=97.47 Aligned_cols=117 Identities=17% Similarity=0.074 Sum_probs=82.0
Q ss_pred CCCCCCCccCccc--cccccccc--ccCChHHHHHHHHHhhC--CeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCC
Q 031562 31 TNLPPGPFNVPLI--GNLRWLLK--SFTEIEPILRNLHSKLG--PVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRP 104 (157)
Q Consensus 31 ~~~~pgp~~~p~~--G~~~~~~~--~~~~~~~~~~~~~~~yg--~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~ 104 (157)
.+.||||.+.|.. +.+..+.. ...+++..+.+++ +|| |+++++..+ +.++++|++.+++|+. +.+.|.+++
T Consensus 10 ~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~-~~~~f~~~~ 86 (415)
T 2zwu_A 10 ANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYE-DYRHFSSEC 86 (415)
T ss_dssp -CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHH-CTTTEETTS
T ss_pred cccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHc-CccccCCCc
Confidence 4678899887764 43322211 1346888888885 799 999998333 7999999999999996 445677765
Q ss_pred CCcchhhhhccCCcc-cccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 105 PPLPTWKIISSNQHD-ITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 105 ~~~~~~~~~~~~~~~-i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
..........+ .+ +++. +|+.|+++|++++ +.|++++++.+.+.++
T Consensus 87 ~~~~~~~~~~~--~~~l~~~-~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~ 133 (415)
T 2zwu_A 87 PFIPREAGEAY--DFIPTSM-DPPEQRQFRALAN-QVVGMPVVDKLENRIQ 133 (415)
T ss_dssp CSSSHHHHHHC--CCTTTTC-CTTTTHHHHHHHH-HHHSHHHHHHHHHHHH
T ss_pred ccCCCCccccc--cccCccC-CCcHHHHHHHHHH-hhhCHHHHHHHHHHHH
Confidence 21212221112 55 6555 5999999999999 9999999988877653
No 37
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.35 E-value=3.7e-13 Score=98.23 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=71.7
Q ss_pred cCChHHHHHHHHHhhCCeEEEecCC----ccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhhhhccCCcccccCCCCcc
Q 031562 53 FTEIEPILRNLHSKLGPVFTLYVGP----RPAIFIADRSLAHKALVQNGAIFADRPPPLPTWKIISSNQHDITSASYGTT 128 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg~i~~~~~~~----~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~ 128 (157)
..+++..+.++ ++||||++++.++ .++++++||+.+++|+ ++.+.|.+++.......... ..+++ +..+|+.
T Consensus 11 ~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~-~~~~~-~~~~g~~ 86 (384)
T 3oo3_A 11 RLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAIL-ADHERFSSMRPVDDEADRAL-LPGIL-QAYDPPD 86 (384)
T ss_dssp TTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHH-HCTTTEECSCCCC-----CC-CTTCG-GGCCTTH
T ss_pred ccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHH-hCchhccCCccccccccccc-ccccc-ccCCChh
Confidence 35677888888 5899999999876 8999999999999999 45567877765432111111 11444 5556999
Q ss_pred hHHHhHhhhhhhcCcccccccccCCC
Q 031562 129 WRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 129 W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
|+++|++++ +.|++++++.+.+.++
T Consensus 87 ~~~~R~~~~-~~fs~~~l~~~~~~i~ 111 (384)
T 3oo3_A 87 HTRLRRTVA-PAYSARRMERLRPRIE 111 (384)
T ss_dssp HHHHHHHHG-GGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HhhCHHHHHHHHHHHH
Confidence 999999999 9999999998877653
No 38
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.33 E-value=1.6e-12 Score=95.41 Aligned_cols=94 Identities=13% Similarity=0.094 Sum_probs=73.4
Q ss_pred CChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCc------chhhhhccCCcccccCCCCc
Q 031562 54 TEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPL------PTWKIISSNQHDITSASYGT 127 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~~~i~~~~~g~ 127 (157)
.+++..+.++ ++|||+++++.++.+.++++|++.+++++.++ +.|.+++... ......+ +++++. +|+
T Consensus 13 ~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~-~g~ 86 (404)
T 3ejb_B 13 KNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQN---QMMLFQ-NQP 86 (404)
T ss_dssp HCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHH---TSGGGC-CTT
T ss_pred cCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhh---cchhhc-CCc
Confidence 4678888887 57999999999999999999999999999765 5566554311 1122233 677554 599
Q ss_pred chHHHhHhhhhhhcCcccccccccCCC
Q 031562 128 TWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 128 ~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.|+++|++++ +.|++++++.+.+.++
T Consensus 87 ~h~~~Rr~~~-~~fs~~~l~~~~~~i~ 112 (404)
T 3ejb_B 87 DHRRLRTLAS-GAFTPRTTESYQPYII 112 (404)
T ss_dssp HHHHHHHHHH-GGGSHHHHHTTHHHHH
T ss_pred hHHHHHHHHH-hhcCHHHHHHHHHHHH
Confidence 9999999999 9999999998877653
No 39
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.31 E-value=1.1e-12 Score=96.19 Aligned_cols=97 Identities=9% Similarity=0.124 Sum_probs=73.5
Q ss_pred cCChHHHHHHHHHhh--CCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhhhhccCCcccccCCCCcchH
Q 031562 53 FTEIEPILRNLHSKL--GPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWKIISSNQHDITSASYGTTWR 130 (157)
Q Consensus 53 ~~~~~~~~~~~~~~y--g~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~W~ 130 (157)
..+++..+.+++++| ||++++..++ +.++++|++.+++|+ ++.+.|.+++.......... +..++ +..+|+.|+
T Consensus 18 ~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~-~~~~~-~~~~g~~~~ 93 (398)
T 4fb2_A 18 DGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVI-QNTKAFSNKGVTFPRYETGE-FELMM-AGQDDPVHK 93 (398)
T ss_dssp TSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHH-TCCSSEEGGGCSSSCC-----CCCTT-TTCCTTHHH
T ss_pred hcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHH-hChhhccCCcccccCCCCcc-cccCc-ccCCchHHH
Confidence 457899999999999 9999998875 699999999999999 44556766654432111111 11344 555699999
Q ss_pred HHhHhhhhhhcCcccccccccCCC
Q 031562 131 VFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 131 ~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
++|++++ +.|++++++.+.+.++
T Consensus 94 ~~R~~~~-~~f~~~~l~~~~~~i~ 116 (398)
T 4fb2_A 94 KYRQLVA-KPFSPEATDLFTEQLR 116 (398)
T ss_dssp HHHHHHH-TTTCHHHHHTTHHHHH
T ss_pred HHHHHHH-HhhCHHHHHHHHHHHH
Confidence 9999999 9999999998876653
No 40
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.31 E-value=9.9e-13 Score=96.86 Aligned_cols=102 Identities=18% Similarity=0.176 Sum_probs=73.4
Q ss_pred CCCCCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh
Q 031562 31 TNLPPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW 110 (157)
Q Consensus 31 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 110 (157)
.+.+|||+. ..+++..+.++++ |||+ +.++.+.++++|++.+++|+.+. +.|.+++... ..
T Consensus 18 l~~~PGp~~-------------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~-~~ 78 (411)
T 2jjn_A 18 IDEVPGMAD-------------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRV-IE 78 (411)
T ss_dssp CCSCCCSSC-------------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGG-ST
T ss_pred CCCCCCccc-------------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCccccc-CC
Confidence 466788861 1356778888876 9998 56667899999999999999753 4576654221 11
Q ss_pred hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 111 KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 111 ~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.......++++. +|+.|+++|++++ +.|++++++.+.+.++
T Consensus 79 -~~~~~~~~~~~~-~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~ 119 (411)
T 2jjn_A 79 -GASPTPGMIHEI-DPPEHRALRKVVS-SAFTPRTISDLEPRIR 119 (411)
T ss_dssp -TCCCCTTCGGGC-CTTHHHHHHHHHH-HHSCHHHHHTTHHHHH
T ss_pred -cccccccccccC-CchHHHHHHHHhh-hhcCHHHHHHHHHHHH
Confidence 111112566554 5999999999999 9999999998877654
No 41
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.30 E-value=1.9e-12 Score=95.31 Aligned_cols=95 Identities=13% Similarity=-0.001 Sum_probs=69.5
Q ss_pred cCChHHHHHHHHHhhCCeEEEec-CCccEEEEeCHHHHHHHHHHcCCCCCCCCC---Ccc---hhhh--hccCCcccccC
Q 031562 53 FTEIEPILRNLHSKLGPVFTLYV-GPRPAIFIADRSLAHKALVQNGAIFADRPP---PLP---TWKI--ISSNQHDITSA 123 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg~i~~~~~-~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~---~~~---~~~~--~~~~~~~i~~~ 123 (157)
..+++..+.++ ++|||++++++ ++.+.++++|++.+++|+.++ .|.+++. ... +... ... +++++
T Consensus 23 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~- 96 (408)
T 3abb_A 23 PYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLA--FPLIG- 96 (408)
T ss_dssp TTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------C--CTTTT-
T ss_pred ccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCccccccc--ccccc-
Confidence 34677788999 89999999998 788999999999999999653 3433322 110 1110 011 45644
Q ss_pred CCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 124 SYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 124 ~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.||+.|+++|++++ +.|++++++.+.+.++
T Consensus 97 ~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 126 (408)
T 3abb_A 97 VDDPVHARQRRMLI-PSFGVKRMNAIRPRLQ 126 (408)
T ss_dssp CCTTHHHHHHHHHG-GGGCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHhh-hhcCHHHHHHHHHHHH
Confidence 56999999999999 9999999988877654
No 42
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.29 E-value=3.5e-12 Score=93.71 Aligned_cols=95 Identities=14% Similarity=0.115 Sum_probs=73.8
Q ss_pred cCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCC--c----c------h-hhh--hccCC
Q 031562 53 FTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPP--L----P------T-WKI--ISSNQ 117 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~--~----~------~-~~~--~~~~~ 117 (157)
..+++..+.++ ++|||++++++++.+.++++|++.+++|+.++ .|.+++.. . . . ... ..+
T Consensus 13 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 87 (404)
T 1z8o_A 13 HVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFA-- 87 (404)
T ss_dssp TSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHS--
T ss_pred ccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcc--
Confidence 34788899999 89999999999889999999999999999754 57665432 1 1 1 110 122
Q ss_pred cccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 118 HDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 118 ~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.++++. +|+.|+++|++++ +.|++++++.+.+.++
T Consensus 88 ~~l~~~-~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 122 (404)
T 1z8o_A 88 TNMGTS-DPPTHTRLRKLVS-QEFTVRRVEAMRPRVE 122 (404)
T ss_dssp SSGGGC-CTTHHHHHHHHHH-TTSCHHHHHHTHHHHH
T ss_pred cccccC-CCcHHHHHHHHHH-HhhCHHHHHHHHHHHH
Confidence 666554 5999999999999 9999999988877654
No 43
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.28 E-value=7.5e-12 Score=92.81 Aligned_cols=114 Identities=11% Similarity=0.017 Sum_probs=78.1
Q ss_pred CCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEe--------cCCccEEEEeCHHHHHHHHHHcCCCCCCCCC
Q 031562 34 PPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLY--------VGPRPAIFIADRSLAHKALVQNGAIFADRPP 105 (157)
Q Consensus 34 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~--------~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~ 105 (157)
||+|.+..++...... ..+++..+.++ ++||||+++. +|+.+++++++++.+++|+.+ .+.|..++.
T Consensus 20 p~~~~~~~~~~~~~~~---~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~-~~~fs~~~~ 94 (433)
T 3ivy_A 20 PNLPPGFDFTDPAIYA---ERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRH-SDVFSSYEN 94 (433)
T ss_dssp CCCCTTCCTTCHHHHT---TCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHC-TTTEESTTT
T ss_pred CCCCCCCCCCCHHHhh---cCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcC-hhhccCCcc
Confidence 4555544444333221 34578889888 7799999998 444789999999999999954 355765543
Q ss_pred Ccchh-------hhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 106 PLPTW-------KIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 106 ~~~~~-------~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
..... +.......+++ ..||+.|+++|++++ +.|++++++.+.+.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~l~-~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 148 (433)
T 3ivy_A 95 GVIPRFKNDIAREDIEVQRFVML-NMDAPHHTRLRKIIS-RGFTPRAVGRLHDELQ 148 (433)
T ss_dssp CSCCCCCTTCCHHHHHGGGGSGG-GCCTTHHHHHHHHHG-GGSCHHHHHTTHHHHH
T ss_pred cccccccccccccccccccCCcc-ccChHHHHHHHHHHH-HhhCHHHHHHHHHHHH
Confidence 32110 01111125665 455999999999999 9999999998877653
No 44
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.27 E-value=3.4e-12 Score=94.49 Aligned_cols=114 Identities=14% Similarity=0.119 Sum_probs=80.7
Q ss_pred CCCCCCccCccccccccccc-cc-CChHHHHHHHHHhhCCeEEEec-CCccEEEEeCHHHHHHHHHHcCCCCCCCCC-Cc
Q 031562 32 NLPPGPFNVPLIGNLRWLLK-SF-TEIEPILRNLHSKLGPVFTLYV-GPRPAIFIADRSLAHKALVQNGAIFADRPP-PL 107 (157)
Q Consensus 32 ~~~pgp~~~p~~G~~~~~~~-~~-~~~~~~~~~~~~~yg~i~~~~~-~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~-~~ 107 (157)
+.||| ++|++..... .. .+++..+.++.+ |||+++++. ++.+.+++++++.+++++.+ .+.|..++. ..
T Consensus 6 ~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~-~~~fs~r~~~~~ 78 (428)
T 1cpt_A 6 TIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQ-PGLFSNAEGSEI 78 (428)
T ss_dssp CSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHC-TTTEESSSSCSS
T ss_pred ccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcC-chhccCcccccc
Confidence 55677 7887544310 11 347778888876 799999998 67899999999999999964 345766654 21
Q ss_pred ch---h-h-h---hcc---CCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 108 PT---W-K-I---ISS---NQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 108 ~~---~-~-~---~~~---~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.. . . . .++ ..+++++. +|+.|+++|++++ +.|++++++.+.+.++
T Consensus 79 ~~~~~~~~~~~~~~g~~~~~~~~l~~~-~g~~~~~~Rr~~~-~~fs~~~l~~~~~~i~ 134 (428)
T 1cpt_A 79 LYDQNNEAFMRSISGGCPHVIDSLTSM-DPPTHTAYRGLTL-NWFQPASIRKLEENIR 134 (428)
T ss_dssp CCCHHHHHHHHHHTTTSSCSSCCGGGC-CTTHHHHHHHHHH-TTSSHHHHGGGHHHHH
T ss_pred CCcccccchhccccccccccccccccC-ChHHHHHHHHHhh-hhhCHHHHHHHHHHHH
Confidence 10 1 1 2 321 12466555 5999999999999 9999999999887664
No 45
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.26 E-value=2.7e-12 Score=94.61 Aligned_cols=97 Identities=12% Similarity=0.101 Sum_probs=72.6
Q ss_pred cCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCc-c---hhhhhccCCcccccCCCCcc
Q 031562 53 FTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPL-P---TWKIISSNQHDITSASYGTT 128 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~-~---~~~~~~~~~~~i~~~~~g~~ 128 (157)
..+++..+.++ ++|||++++++++.+.++++|++.+++|+.++ .|.+++... . ........+.++++ .+|+.
T Consensus 19 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~ 94 (411)
T 3a4g_A 19 WQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDP--RLSKDWRHTLPEDQRADMPATPTPMMIL-MDPPD 94 (411)
T ss_dssp TTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCT--TEESCGGGGSCGGGCTTCCSCSSCCGGG-CCTTH
T ss_pred hcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCC--CcccccccccccccccccCccccccccc-CCchH
Confidence 34678889999 89999999999999999999999999999654 376654211 0 00111101256655 45999
Q ss_pred hHHHhHhhhhhhcCcccccccccCCC
Q 031562 129 WRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 129 W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
|+++|++++ +.|++++++.+.+.++
T Consensus 95 h~~~R~~~~-~~fs~~~l~~~~~~i~ 119 (411)
T 3a4g_A 95 HTRLRKLVG-RSFTVRRMNELEPRIT 119 (411)
T ss_dssp HHHHHHHHH-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHhh-hhhCHHHHHHHHHHHH
Confidence 999999999 9999999988877653
No 46
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.25 E-value=2.9e-12 Score=94.20 Aligned_cols=94 Identities=11% Similarity=0.008 Sum_probs=70.6
Q ss_pred CChHHHHHHHHHhhCCeEEEec-CCccEEEEeCHHHHHHHHHHcCCCCCCCCC--C-cc---hhhhhccCCcccccCCCC
Q 031562 54 TEIEPILRNLHSKLGPVFTLYV-GPRPAIFIADRSLAHKALVQNGAIFADRPP--P-LP---TWKIISSNQHDITSASYG 126 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~~~~~-~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~--~-~~---~~~~~~~~~~~i~~~~~g 126 (157)
.+++..+.++ ++|||++++++ ++.+.++++|++.+++|+.++ .|.+++. . .. ......+ .++++ .+|
T Consensus 19 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~--~~l~~-~~g 92 (403)
T 3aba_A 19 FLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGR--GSLLW-QDE 92 (403)
T ss_dssp TSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCT--TCCTT-CCT
T ss_pred cChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccc--ccccc-CCc
Confidence 3556678888 88999999997 789999999999999999753 4655531 1 10 1111122 56654 469
Q ss_pred cchHHHhHhhhhhhcCcccccccccCCC
Q 031562 127 TTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 127 ~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+.|+++|++++ +.|++++++.+.+.++
T Consensus 93 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 119 (403)
T 3aba_A 93 PEHTSDRKLLA-KEFTVRRMQALRPNIQ 119 (403)
T ss_dssp THHHHHHHHHH-HHSCHHHHHTTHHHHH
T ss_pred hhHHHHHHHHH-hhcCHHHHHHHHHHHH
Confidence 99999999999 9999999998877654
No 47
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.25 E-value=2.4e-12 Score=95.95 Aligned_cols=122 Identities=15% Similarity=0.121 Sum_probs=79.1
Q ss_pred CCCCCCCCCccCccccccccccc--ccC-ChHHHHHHHHHhhCC-eEEEecCCc-------cEEEEeCHHHHHHHHHH--
Q 031562 29 YKTNLPPGPFNVPLIGNLRWLLK--SFT-EIEPILRNLHSKLGP-VFTLYVGPR-------PAIFIADRSLAHKALVQ-- 95 (157)
Q Consensus 29 ~~~~~~pgp~~~p~~G~~~~~~~--~~~-~~~~~~~~~~~~yg~-i~~~~~~~~-------~~i~i~~p~~~~~i~~~-- 95 (157)
.+.+.+|||.++|++|++..+.. ... +++.++.++.++||+ ||++++++. ..|++++.+..+.++..
T Consensus 6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~ 85 (473)
T 3dan_A 6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK 85 (473)
T ss_dssp SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence 35677999999999999987631 134 678899999999999 999998643 34455565544444421
Q ss_pred --cCCCCCCCCCCcchhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 96 --NGAIFADRPPPLPTWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 96 --~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+...+...... ....+++.....++..+|+.|+++|++++ +.|++ +++.+.+.++
T Consensus 86 ~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~h~~~R~~~~-~~f~~-~~~~~~~~i~ 142 (473)
T 3dan_A 86 VEKKDLFTGTYMP--STKLTGGYRVLSYLDPSEPRHAQLKNLLF-FMLKN-SSNRVIPQFE 142 (473)
T ss_dssp EECSSCTTSSSCC--CGGGGTTSCCGGGCCTTSHHHHHHHHHHH-HHHHH-HHHHHHHHHH
T ss_pred eeccccccccccC--CccccCCCcceeeeCCCcHHHHHHHHHHH-HHHHH-HHHHHHHHHH
Confidence 11111111111 12344432223335566999999999999 99999 4777766543
No 48
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.23 E-value=6.4e-12 Score=92.78 Aligned_cols=95 Identities=15% Similarity=0.085 Sum_probs=71.6
Q ss_pred cCChHHHHHHHHHhhCCeEEEec-CCccEEEEeCHHHHHHHHHHcCCCCCCCCCC-cc---hhhhhccCCcccccCCCCc
Q 031562 53 FTEIEPILRNLHSKLGPVFTLYV-GPRPAIFIADRSLAHKALVQNGAIFADRPPP-LP---TWKIISSNQHDITSASYGT 127 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg~i~~~~~-~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~-~~---~~~~~~~~~~~i~~~~~g~ 127 (157)
..+++..+.++ ++|||++++++ ++.+.++++|++.+++|+.++ .|.+++.. .. ...... ..++++. +|+
T Consensus 36 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~--~~~l~~~-dg~ 109 (417)
T 2y5n_A 36 GLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMV--KGGLLSM-DPP 109 (417)
T ss_dssp SCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCC--CCSGGGC-CTT
T ss_pred ccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccc--cccCccC-Cch
Confidence 34677888999 89999999997 789999999999999999643 46554321 10 111112 2566554 599
Q ss_pred chHHHhHhhhhhhcCcccccccccCCC
Q 031562 128 TWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 128 ~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.|+++|++++ +.|++++++.+.+.++
T Consensus 110 ~h~~~R~~l~-~~fs~~~l~~~~~~i~ 135 (417)
T 2y5n_A 110 EHSRLRRLVV-KAFTARRAESLRPRAR 135 (417)
T ss_dssp HHHHHHHHHH-HHSCHHHHHHTHHHHH
T ss_pred HHHHHHHHHh-hhcCHHHHHHHHHHHH
Confidence 9999999999 9999999998877654
No 49
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.21 E-value=1.9e-11 Score=90.22 Aligned_cols=97 Identities=8% Similarity=0.004 Sum_probs=71.4
Q ss_pred cCChHHHHHHHHHhhC-CeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhhhhccCCcccccCCCCcchHH
Q 031562 53 FTEIEPILRNLHSKLG-PVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWKIISSNQHDITSASYGTTWRV 131 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg-~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~W~~ 131 (157)
..+++.++.++++++| ||+++..++ +.++++|++.+++|+. +.+.|.+++.... .........++ +..||+.|++
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~-~~~~~~~~~~~-~~~dg~~h~~ 112 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVP-REAGEAYDMVP-TKLDPPEHTP 112 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSS-HHHHHHCCCTT-TTCCTTTHHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCC-cccccccccCC-ccCCcHHHHH
Confidence 3578889988887665 899998766 5899999999999994 4457776653321 11111112455 4455999999
Q ss_pred HhHhhhhhhcCcccccccccCCC
Q 031562 132 FRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 132 ~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+|++++ +.|++++++.+.+.++
T Consensus 113 ~R~~~~-~~fs~~~l~~~~~~i~ 134 (421)
T 3lxh_A 113 YRKAID-KGLNLAEIRKLEDQIR 134 (421)
T ss_dssp HHHHHH-HHHSHHHHHTTHHHHH
T ss_pred HHHHHh-hhcCHHHHHHHHHHHH
Confidence 999999 9999999998876653
No 50
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.19 E-value=1.1e-11 Score=91.35 Aligned_cols=94 Identities=14% Similarity=0.111 Sum_probs=71.4
Q ss_pred CChHHHHHHHHHhhCCeEEEec-CCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcc------hhhhh----ccCCcc-cc
Q 031562 54 TEIEPILRNLHSKLGPVFTLYV-GPRPAIFIADRSLAHKALVQNGAIFADRPPPLP------TWKII----SSNQHD-IT 121 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~~~~~-~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~------~~~~~----~~~~~~-i~ 121 (157)
.+++..+.++. +|||++++++ ++.+.++++|++.+++|+.+ ..|.+++.... ..... ++ .+ ++
T Consensus 22 ~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ 96 (413)
T 2z36_A 22 FAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLAD--GRFSSDKRKDGFPLFTLDAATLQQLRSQ--PPLML 96 (413)
T ss_dssp TBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHC--TTEECCTTSTTCCCSSCCHHHHHHHTTS--CCCGG
T ss_pred cCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcC--CCcccCccccCccccccccccccccccc--ccccc
Confidence 46677888887 7899999997 78899999999999999975 35665542211 11222 22 66 65
Q ss_pred cCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 122 SASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 122 ~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+. +|+.|+++|++++ +.|++++++.+.+.++
T Consensus 97 ~~-~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 127 (413)
T 2z36_A 97 GM-DGAEHSAARRPVI-GEFTVKRLAALRPRIQ 127 (413)
T ss_dssp GC-CHHHHHHHHHHHH-GGGSHHHHHHHHHHHH
T ss_pred cc-CchHHHHHHHHHH-HhhCHHHHHHHHHHHH
Confidence 54 5999999999999 9999999988877654
No 51
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.18 E-value=9.4e-12 Score=91.56 Aligned_cols=95 Identities=15% Similarity=0.135 Sum_probs=70.9
Q ss_pred cCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCC--Ccc---hh------hhhccCCcccc
Q 031562 53 FTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPP--PLP---TW------KIISSNQHDIT 121 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~--~~~---~~------~~~~~~~~~i~ 121 (157)
..+++..+.++ ++|||++++++++.+.++++|++.+++|+.++ .+.+++. ... .. ....+ ++++
T Consensus 14 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~ 88 (408)
T 1odo_A 14 GADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSS--DVSKDARAHWPAFGEVVGTWPLALWVAV--ENMF 88 (408)
T ss_dssp CTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCT--TEESCHHHHCTTHHHHTTTCTTTHHHHC--CSGG
T ss_pred cCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCC--Cccccccccccccccccccccccccccc--cccc
Confidence 45788899999 99999999999888999999999999999643 2333221 110 00 01122 5664
Q ss_pred cCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 122 SASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 122 ~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
..+|+.|+++|++++ +.|++++++.+.+.++
T Consensus 89 -~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 119 (408)
T 1odo_A 89 -TAYGPNHRKLRRLVA-PAFSARRVDAMRPAVE 119 (408)
T ss_dssp -GCCHHHHHHHHHTTG-GGGSHHHHHHHHHHHH
T ss_pred -ccCChHHHHHHHHhh-hhcCHHHHHHHHHHHH
Confidence 455999999999999 9999999998877654
No 52
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.17 E-value=1.8e-11 Score=89.56 Aligned_cols=95 Identities=9% Similarity=-0.015 Sum_probs=71.9
Q ss_pred cCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcc-hhhhhccCCcccccCCCCcchHH
Q 031562 53 FTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLP-TWKIISSNQHDITSASYGTTWRV 131 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~g~~W~~ 131 (157)
..+++..+.+++++ ||++++..++ +.++++|++.+++|+.+ .+.|.+++.... ...... ..++ +..+|+.|++
T Consensus 23 ~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~--~~~~-~~~~g~~h~~ 96 (396)
T 3oft_A 23 EQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGD-AERLSSQCLAVTPGLGKVM--QFIP-LQQDGAEHKA 96 (396)
T ss_dssp TTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHC-TTTEESTTCCSSTTHHHHH--CCTT-TTCCHHHHHH
T ss_pred hcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcC-cccccCCcccCCCcccccc--ccCc-cccCCcHHHH
Confidence 45789999999998 9999998774 58999999999999954 356766653221 111111 1344 5556999999
Q ss_pred HhHhhhhhhcCcccccccccCCC
Q 031562 132 FRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 132 ~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+|++++ +.|++++++.+.+.++
T Consensus 97 ~R~~~~-~~f~~~~l~~~~~~i~ 118 (396)
T 3oft_A 97 FRTPVM-KGLASRFVVALEPKVQ 118 (396)
T ss_dssp HHHHHH-HHTCHHHHHHHHHHHH
T ss_pred HHHHhh-hhhCHHHHHHHHHHHH
Confidence 999999 9999999998877653
No 53
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.17 E-value=1.4e-11 Score=90.60 Aligned_cols=94 Identities=17% Similarity=0.234 Sum_probs=70.9
Q ss_pred CChHHHHHHHHHhhCCeEEEec-CCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh-hhhccCCcc--cccCCCC---
Q 031562 54 TEIEPILRNLHSKLGPVFTLYV-GPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW-KIISSNQHD--ITSASYG--- 126 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~~~~~-~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~--i~~~~~g--- 126 (157)
.+++..+.++ ++|||++++++ ++.+.++++|++.+++|+.+ ..|.+++...... ....+ .+ +++ .+|
T Consensus 26 ~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~--~~~~l~~-~~g~~~ 99 (404)
T 2xbk_A 26 LKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHD--ERIGRTHPDPPSAAQYVRS--PFLDLLI-SDADAE 99 (404)
T ss_dssp TBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTC--TTEESBCSSGGGSCCSSCC--HHHHTTC-BCSCHH
T ss_pred cCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcC--CCCCCCccccccCCccccc--cccccee-eCCCCC
Confidence 3567788888 89999999997 78999999999999999965 3465554332111 11121 45 544 459
Q ss_pred ---cchHHHhHhhhhhhcCcccccccccCCC
Q 031562 127 ---TTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 127 ---~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+.|+++|++++ +.|++++++.+.+.++
T Consensus 100 ~~~~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 129 (404)
T 2xbk_A 100 SGRRQHAETRRLLT-PLFSARRVLEMQPKVE 129 (404)
T ss_dssp HHHHHHHHHHHHHG-GGGCHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHhh-hhcCHHHHHHHHHHHH
Confidence 99999999999 9999999988877654
No 54
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.17 E-value=1.5e-11 Score=91.32 Aligned_cols=97 Identities=10% Similarity=0.015 Sum_probs=72.0
Q ss_pred CChHHHHHHHHHhhCCeEEEecC-------CccEEEEeCHHHHHHHHHHcCCCCCCCCCC--cchhhhhccCCcccccCC
Q 031562 54 TEIEPILRNLHSKLGPVFTLYVG-------PRPAIFIADRSLAHKALVQNGAIFADRPPP--LPTWKIISSNQHDITSAS 124 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~~~~~~-------~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~ 124 (157)
.+++..+.++. +||||+++..+ +.+.++++|++.+++|+.++ +.|.+++.. ......++..++++++.
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~- 120 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVL- 120 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGC-
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccC-
Confidence 35777888885 68999999986 67899999999999999764 457766531 11112221001677665
Q ss_pred CCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 125 YGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 125 ~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+|+.|+++|++++ +.|++++++.+.+.++
T Consensus 121 dg~~h~~~R~~l~-~~fs~~~l~~~~~~i~ 149 (435)
T 2wm5_A 121 DDPRHQRLRSIVS-RAFTPKVVARIEAAVR 149 (435)
T ss_dssp CTTHHHHHHHHHH-HTCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhH-HhhCHHHHHHHHHHHH
Confidence 5999999999999 9999999988877654
No 55
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.16 E-value=2.1e-11 Score=90.17 Aligned_cols=94 Identities=12% Similarity=0.107 Sum_probs=70.9
Q ss_pred CChHHHHHHHHHhhCCeEEEecC--CccEEEEeCHHHHHHHHHHcCCCCCCCCCC--------cc-h------hhhhccC
Q 031562 54 TEIEPILRNLHSKLGPVFTLYVG--PRPAIFIADRSLAHKALVQNGAIFADRPPP--------LP-T------WKIISSN 116 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~~~~~~--~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~--------~~-~------~~~~~~~ 116 (157)
.+++..+.++. +|||+++++++ +.+.++++|++.+++|+.++ .|.+++.. .. . ...+++
T Consensus 20 ~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 95 (425)
T 2z3t_A 20 ADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE- 95 (425)
T ss_dssp HCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT-
T ss_pred cChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc-
Confidence 35677888876 49999999987 78899999999999999753 67665431 10 1 112332
Q ss_pred CcccccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 117 QHDITSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 117 ~~~i~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.++++. +|+.|+++|++++ +.|++++++.+.+.++
T Consensus 96 -~~l~~~-dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 130 (425)
T 2z3t_A 96 -NWLVFL-DPPHHTELRSLLT-TEFSPSIVTGLRPRIA 130 (425)
T ss_dssp -TCGGGC-CHHHHHHHHHHHH-GGGSHHHHHHHHHHHH
T ss_pred -cccccC-CchHHHHHHHHHH-HhhCHHHHHHHHHHHH
Confidence 567555 5999999999999 9999999988877654
No 56
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.15 E-value=2.3e-11 Score=89.75 Aligned_cols=97 Identities=10% Similarity=-0.006 Sum_probs=72.1
Q ss_pred cCChHHHHHHHHHhhCCeEEEecC-CccEEEEeCHHHHHHHHHHcCCCCCCCCC---Ccchhhhh---ccCCcccccCCC
Q 031562 53 FTEIEPILRNLHSKLGPVFTLYVG-PRPAIFIADRSLAHKALVQNGAIFADRPP---PLPTWKII---SSNQHDITSASY 125 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg~i~~~~~~-~~~~i~i~~p~~~~~i~~~~~~~~~~~~~---~~~~~~~~---~~~~~~i~~~~~ 125 (157)
..+++..+.+++++ ||+++++++ +.+.++++|++.+++|+.++ .|.+++. ........ +...+++++. |
T Consensus 28 ~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-d 103 (417)
T 3tyw_A 28 PFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRT-D 103 (417)
T ss_dssp TTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGC-C
T ss_pred ccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhc-C
Confidence 35677889999988 999999987 58999999999999999754 5655421 11111211 0112566554 5
Q ss_pred CcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 126 GTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 126 g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
|+.|+++|++++ +.|++++++.+.+.++
T Consensus 104 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 131 (417)
T 3tyw_A 104 APEHTRYRRMLL-PAFTVRRVRAMRPAVQ 131 (417)
T ss_dssp HHHHHHHHHHHG-GGGCHHHHHHTHHHHH
T ss_pred CcHHHHHHHHHH-hhhCHHHHHHHHHHHH
Confidence 999999999999 9999999998877654
No 57
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.15 E-value=2.4e-11 Score=89.67 Aligned_cols=95 Identities=13% Similarity=0.087 Sum_probs=70.9
Q ss_pred CChHHHHHHHHHhhCCeE-----EEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCc-chh-hhh-c-cCCcccccCC
Q 031562 54 TEIEPILRNLHSKLGPVF-----TLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPL-PTW-KII-S-SNQHDITSAS 124 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~-----~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~-~~~-~~~-~-~~~~~i~~~~ 124 (157)
.+++..+.++. +|||++ +++. .+.++++|++.+++|+.++ ..|.+++... ... ..+ + ..+.++++.
T Consensus 25 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~- 99 (414)
T 2uuq_A 25 PNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQ- 99 (414)
T ss_dssp TCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGC-
T ss_pred cCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccC-
Confidence 56788888884 689999 7765 6899999999999999765 5577665332 111 122 1 112677665
Q ss_pred CCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 125 YGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 125 ~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+|+.|+++|++++ +.|++++++.+.+.++
T Consensus 100 ~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 128 (414)
T 2uuq_A 100 DPPVHTEFRKLVS-RGFTPRQVETVEPTVR 128 (414)
T ss_dssp CTTHHHHHHHHHH-TTSSHHHHHHHHHHHH
T ss_pred CchhHHHHHHHhh-hhcCHHHHHHHHHHHH
Confidence 5999999999999 9999999998877654
No 58
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.15 E-value=3.1e-11 Score=88.96 Aligned_cols=97 Identities=16% Similarity=0.159 Sum_probs=70.4
Q ss_pred cCChHHHHHHHHHhhCCeEEEec-CCccEEEEeCHHHHHHHHHHcCCCCCCCC-CCcch-----h---hhhcc-C-Cccc
Q 031562 53 FTEIEPILRNLHSKLGPVFTLYV-GPRPAIFIADRSLAHKALVQNGAIFADRP-PPLPT-----W---KIISS-N-QHDI 120 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg~i~~~~~-~~~~~i~i~~p~~~~~i~~~~~~~~~~~~-~~~~~-----~---~~~~~-~-~~~i 120 (157)
..+++..+.++ ++|||++++++ ++.+.++++|++.+++|+.++ .+.+++ ..... . ..++. . ..++
T Consensus 16 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 92 (411)
T 1gwi_A 16 VTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDP--RLVKDINVWGAWRRGEIPADWPLIGLANPGRSM 92 (411)
T ss_dssp CSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCT--TEECCGGGCHHHHTTCSCTTCTTHHHHSCCSSG
T ss_pred cCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCC--ccccCcccccccccccCCcccchhhhhcccccc
Confidence 35688889999 89999999997 788999999999999999643 243332 11100 0 01000 1 1566
Q ss_pred ccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 121 TSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 121 ~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
++ .+|+.|+++|++++ +.|++++++.+.+.++
T Consensus 93 ~~-~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 124 (411)
T 1gwi_A 93 LT-VDGAEHRRLRTLVA-QALTVRRVEHMRGRIT 124 (411)
T ss_dssp GG-CCHHHHHHHHHHHT-TTSCHHHHHTTHHHHH
T ss_pred cc-CCcHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Confidence 44 45999999999999 9999999998877654
No 59
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.14 E-value=1.5e-11 Score=90.65 Aligned_cols=96 Identities=14% Similarity=0.109 Sum_probs=69.6
Q ss_pred CChHHHHHHHHHhhCCeEEEecCC--ccEEEEeCHHHHHHHHHHcCCCCCCCCCCcc---hhhhhccC-CcccccCCCCc
Q 031562 54 TEIEPILRNLHSKLGPVFTLYVGP--RPAIFIADRSLAHKALVQNGAIFADRPPPLP---TWKIISSN-QHDITSASYGT 127 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~~~~~~~--~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~-~~~i~~~~~g~ 127 (157)
..++..+.+++ +|||++++.+++ .+.+++++++.+++|+.+ ..|.+++.... ....+.+. .+++++ .||+
T Consensus 27 ~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~~-~dg~ 102 (411)
T 2dkk_A 27 PEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSLAF-ADQP 102 (411)
T ss_dssp SCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCSTT-CCTT
T ss_pred ccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhcccccccc-CCch
Confidence 45567888887 799999999764 789999999999999964 45655432210 11111100 266654 4699
Q ss_pred chHHHhHhhhhhhcCcccccccccCCC
Q 031562 128 TWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 128 ~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.|+++|++++ +.|++++++.+.+.++
T Consensus 103 ~h~~~R~~~~-~~fs~~~l~~~~~~i~ 128 (411)
T 2dkk_A 103 DHNRLRRAVA-GAFTVGATKRLRPRAQ 128 (411)
T ss_dssp HHHHHHHHHG-GGSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhh-HhhCHHHHHHHHHHHH
Confidence 9999999999 9999999998877653
No 60
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.13 E-value=1.8e-11 Score=90.43 Aligned_cols=95 Identities=12% Similarity=0.122 Sum_probs=69.9
Q ss_pred cCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCC---C-cc-h--hhhhccC-CcccccCC
Q 031562 53 FTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPP---P-LP-T--WKIISSN-QHDITSAS 124 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~---~-~~-~--~~~~~~~-~~~i~~~~ 124 (157)
..+++..+.++ ++|||+++ + ++.+.++++|++.+++|+.++. |.+++. . .. . ...++.. ..++++.
T Consensus 25 ~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 98 (419)
T 1q5d_A 25 AEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGL- 98 (419)
T ss_dssp TTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTS-
T ss_pred hhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccC-
Confidence 34678888888 68999999 6 7789999999999999997543 776651 1 10 1 1122100 1566554
Q ss_pred CCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 125 YGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 125 ~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+|+.|+++|++++ +.|++++++.+.+.++
T Consensus 99 ~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 127 (419)
T 1q5d_A 99 PPEDHARVRKLVN-PSFTSRAIDLLRAEIQ 127 (419)
T ss_dssp CHHHHHHHHHHHG-GGGSHHHHGGGHHHHH
T ss_pred CchHHHHHHHHHH-HhcCHHHHHHHHHHHH
Confidence 5999999999999 9999999998877653
No 61
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.09 E-value=6.9e-11 Score=86.63 Aligned_cols=90 Identities=11% Similarity=-0.019 Sum_probs=68.4
Q ss_pred CChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhhhhccCCcccccCCCCcchHHHh
Q 031562 54 TEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWKIISSNQHDITSASYGTTWRVFR 133 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~W~~~R 133 (157)
.+++..+.++++ ||||+++. .+.++++|++.+++|+.++ +.|.+++... . ..+.+ +++++. +|+.|+++|
T Consensus 18 ~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~-~~~~~--~~l~~~-~g~~h~~~R 87 (398)
T 2xkr_A 18 REARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQP-ELFSNAGGIR-P-DQPAL--PMMIDM-DDPAHLLRR 87 (398)
T ss_dssp TTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCT-TTEESTTCSS-T-TSCCC--SSGGGC-CTTHHHHHH
T ss_pred cChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCc-ccccCccccC-C-ccccc--cccccc-CchHHHHHH
Confidence 467888988887 99999764 3799999999999999654 3576655322 1 12222 566555 599999999
Q ss_pred HhhhhhhcCcccccccccCCC
Q 031562 134 RNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 134 ~~~~~~~f~~~~l~~~~~~~~ 154 (157)
++++ +.|++++++.+.+.++
T Consensus 88 ~~~~-~~fs~~~l~~~~~~i~ 107 (398)
T 2xkr_A 88 KLVN-AGFTRKRVKDKEASIA 107 (398)
T ss_dssp HHHG-GGSCHHHHHTTHHHHH
T ss_pred HHhh-hhhCHHHHHHHHHHHH
Confidence 9999 9999999988877653
No 62
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.06 E-value=2.1e-11 Score=90.67 Aligned_cols=93 Identities=13% Similarity=0.049 Sum_probs=59.4
Q ss_pred CChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhhhhccCCcccccCCCCcchHHHh
Q 031562 54 TEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWKIISSNQHDITSASYGTTWRVFR 133 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~W~~~R 133 (157)
.+++.++.++ ++|||++++..++ .+++++++.+++|+.+.. .|.+++........++. +++ +..||+.|+++|
T Consensus 53 ~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~--~~l-~~~dg~~h~~~R 125 (441)
T 3nc3_A 53 NNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPVMRG--PVL-AQMHGKEHSAKR 125 (441)
T ss_dssp HCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCSCC----------------CCH
T ss_pred cChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-cccccccccccccccCC--Ccc-ccCCcHHHHHHH
Confidence 3455666665 6799999987655 899999999999997654 37665544322222221 345 455599999999
Q ss_pred HhhhhhhcCcccccccccCCC
Q 031562 134 RNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 134 ~~~~~~~f~~~~l~~~~~~~~ 154 (157)
++++ +.|++++++.+.+.++
T Consensus 126 r~~~-~~fs~~~l~~~~~~i~ 145 (441)
T 3nc3_A 126 RIVV-RSFIGDALDHLSPLIK 145 (441)
T ss_dssp HHHH-HHHHHTHHHHHHHHHH
T ss_pred HHHH-hhcCHHHHHHHHHHHH
Confidence 9999 9999999998877653
No 63
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.05 E-value=8.9e-11 Score=87.46 Aligned_cols=95 Identities=16% Similarity=0.096 Sum_probs=69.9
Q ss_pred hHHHHHHHHHhhCCeE--EEe-cCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhh---------hhcc---CCccc
Q 031562 56 IEPILRNLHSKLGPVF--TLY-VGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWK---------IISS---NQHDI 120 (157)
Q Consensus 56 ~~~~~~~~~~~yg~i~--~~~-~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~i 120 (157)
++..+.++ ++||||+ ++. .++.+.+++++++.+++|+.+. +.|..++....... ..++ ..+++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 67778887 6789999 887 6778999999999999999654 56766553321110 0101 11355
Q ss_pred ccCCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 121 TSASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 121 ~~~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+ ..||+.|+++|++++ +.|++++++.+.+.++
T Consensus 125 ~-~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 156 (450)
T 3tkt_A 125 V-QMDAPKHPKLRRLTQ-DWFMPKNLARLDGEIR 156 (450)
T ss_dssp G-GCCTTHHHHHHHHHH-TTTSHHHHGGGHHHHH
T ss_pred c-cCCCHHHHHHHHHhh-hhhCHHHHHHHHHHHH
Confidence 4 455999999999999 9999999999877654
No 64
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.05 E-value=1.2e-10 Score=86.01 Aligned_cols=96 Identities=13% Similarity=0.026 Sum_probs=70.4
Q ss_pred CChHHHHHHHHHhhCCeEEEecCC--ccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhh---hhccC-CcccccCCCCc
Q 031562 54 TEIEPILRNLHSKLGPVFTLYVGP--RPAIFIADRSLAHKALVQNGAIFADRPPPLPTWK---IISSN-QHDITSASYGT 127 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~~~~~~~--~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~-~~~i~~~~~g~ 127 (157)
.+++..+.++.+ ||||+++...+ .+.+++++++.+++|+.+ .+.|.+++... ... ..... +.++ +..||+
T Consensus 37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~-~~~fs~~~~~~-~~~~~~~~~~~~~~~l-~~~dg~ 112 (415)
T 3mgx_A 37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAP-SAPLTSEYGMM-IGFDRDHPDNSGGRMM-VVSEHE 112 (415)
T ss_dssp TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCT-TSSEECTTCSS-TTCCSSSCCTTTTTSG-GGCCHH
T ss_pred CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhC-hhhhcCCcccc-ccccccccccccCCCc-cccCcH
Confidence 478888888887 99999997445 789999999999999943 34576654332 111 11101 2455 445599
Q ss_pred chHHHhHhhhhhhcCcccccccccCCC
Q 031562 128 TWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 128 ~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.|+++|++++ +.|++++++++.+.++
T Consensus 113 ~h~~~R~~~~-~~fs~~~l~~~~~~i~ 138 (415)
T 3mgx_A 113 QHRKLRKLVG-PLLSRAAARKLAERVR 138 (415)
T ss_dssp HHHHHHHHHG-GGSSHHHHHHSHHHHH
T ss_pred HHHHHHHHhH-hhhCHHHHHHHHHHHH
Confidence 9999999999 9999999998877653
No 65
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.02 E-value=2.3e-10 Score=84.33 Aligned_cols=95 Identities=13% Similarity=0.080 Sum_probs=67.3
Q ss_pred cCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhhhhc-------cCCcccccCCC
Q 031562 53 FTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWKIIS-------SNQHDITSASY 125 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~ 125 (157)
..+++..+.++ ++||||+++..+ .+++++++.+++|+.+. ..+..++.........+ ...+++++. |
T Consensus 28 ~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-d 101 (418)
T 3r9b_A 28 RADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFL-D 101 (418)
T ss_dssp TTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGC-C
T ss_pred ccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhc-C
Confidence 45788888888 578999998665 89999999999999643 32333332221111111 012566555 4
Q ss_pred CcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 126 GTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 126 g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
|+.|+++|++++ +.|++++++.+.+.++
T Consensus 102 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 129 (418)
T 3r9b_A 102 PPDHTRLRGLVS-KAFAPRVIKRLEPEIT 129 (418)
T ss_dssp TTHHHHHHHHHH-GGGSHHHHGGGHHHHH
T ss_pred CchHHHHHHHhh-hhhCHHHHHHHHHHHH
Confidence 999999999999 9999999999877654
No 66
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.00 E-value=1.6e-10 Score=84.68 Aligned_cols=92 Identities=12% Similarity=0.013 Sum_probs=65.6
Q ss_pred ChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchh-----hhhccC-CcccccCCCCcc
Q 031562 55 EIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTW-----KIISSN-QHDITSASYGTT 128 (157)
Q Consensus 55 ~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~i~~~~~g~~ 128 (157)
+++..+.++ ++|||+++ + +.+.++++|++.+++|+.+ +.|.+++...... ..+.+. +.++++. +|+.
T Consensus 14 ~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~ 86 (397)
T 3buj_A 14 DPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQ-DEPD 86 (397)
T ss_dssp CCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGC-CTTH
T ss_pred CchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccC-Cchh
Confidence 567777766 58999998 6 6889999999999999964 4565432111000 011100 1667555 5999
Q ss_pred hHHHhHhhhhhhcCcccccccccCCC
Q 031562 129 WRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 129 W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
|+++|++++ +.|++++++.+.+.++
T Consensus 87 h~~~R~~~~-~~fs~~~l~~~~~~i~ 111 (397)
T 3buj_A 87 HGRLRGVVG-PAFSPSALRRLEPVIA 111 (397)
T ss_dssp HHHHHHHHG-GGSSTTTTGGGHHHHH
T ss_pred HHHHHHHHH-HhcCHHHHHHHHHHHH
Confidence 999999999 9999999999877654
No 67
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=98.96 E-value=2.2e-10 Score=83.97 Aligned_cols=88 Identities=9% Similarity=0.053 Sum_probs=59.5
Q ss_pred HHHHHhhCCeEEEecC-Cc---cEEEEeCHHHHHHHHHHcCCCCCCCCC------Cc--c-hhhhhccCCcccccCCCCc
Q 031562 61 RNLHSKLGPVFTLYVG-PR---PAIFIADRSLAHKALVQNGAIFADRPP------PL--P-TWKIISSNQHDITSASYGT 127 (157)
Q Consensus 61 ~~~~~~yg~i~~~~~~-~~---~~i~i~~p~~~~~i~~~~~~~~~~~~~------~~--~-~~~~~~~~~~~i~~~~~g~ 127 (157)
.+++++ ||+++++++ +. ++++++|++.+++|+.++ ..|..++. .. . ......+ .++++. +|+
T Consensus 20 ~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~-~g~ 94 (398)
T 1lfk_A 20 DELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELV--GNLMDY-DPP 94 (398)
T ss_dssp HHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCT--TCGGGC-CTT
T ss_pred HHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccc--cCcccc-CCH
Confidence 346665 999999875 55 899999999999999433 34655543 11 0 1111122 566554 599
Q ss_pred chHHHhHhhhhhhcCcccccccccCCC
Q 031562 128 TWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 128 ~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.|+++|++++ +.|++++++.+.+.++
T Consensus 95 ~~~~~R~~~~-~~fs~~~l~~~~~~i~ 120 (398)
T 1lfk_A 95 EHTRLRRKLT-PGFTLRKMQRMAPYIE 120 (398)
T ss_dssp HHHHHHHHHG-GGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hhhCHHHHHHHHHHHH
Confidence 9999999999 9999999988877654
No 68
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=98.92 E-value=4.5e-10 Score=81.54 Aligned_cols=90 Identities=10% Similarity=0.031 Sum_probs=63.4
Q ss_pred HHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCC--Ccchh----hh--hccCC-cccccCCCCc
Q 031562 57 EPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPP--PLPTW----KI--ISSNQ-HDITSASYGT 127 (157)
Q Consensus 57 ~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~--~~~~~----~~--~~~~~-~~i~~~~~g~ 127 (157)
+..+.++ ++|||++++ + +.+++++++.+++|+.+. +.|.+++. ..... +. ++... +++++. ||+
T Consensus 2 ~~~~~~l-r~~Gpv~~~---g-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~g~ 74 (368)
T 1io7_A 2 YDWFSEM-RKKDPVYYD---G-NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTS-DPP 74 (368)
T ss_dssp HHHHHHH-HHHCSEEEC---S-SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGC-CTT
T ss_pred CHHHHHH-HhcCCeEeE---C-CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccC-CCh
Confidence 4456666 589999987 3 689999999999999753 45776653 10011 11 11101 556454 599
Q ss_pred chHHHhHhhhhhhcCcccccccccCCC
Q 031562 128 TWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 128 ~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.|+++|++++ +.|++++++.+.+.++
T Consensus 75 ~h~~~R~~~~-~~f~~~~~~~~~~~i~ 100 (368)
T 1io7_A 75 LHDELRSMSA-DIFSPQKLQTLETFIR 100 (368)
T ss_dssp HHHHHHGGGT-TTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hhcCHHHHHHHHHHHH
Confidence 9999999999 9999999988877653
No 69
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=98.92 E-value=2.9e-10 Score=81.82 Aligned_cols=78 Identities=14% Similarity=0.102 Sum_probs=58.1
Q ss_pred HhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhhhhccCCcccccCCCCcchHHHhHhhhhhhcCcc
Q 031562 65 SKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWKIISSNQHDITSASYGTTWRVFRRNLSAEILHPL 144 (157)
Q Consensus 65 ~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~~~ 144 (157)
++||||+++ | .++++|++.+++|+.++ +.|.+++..... .. ++ .++++. +|+.|+++|++++ +.|+++
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~-~~-~~--~~l~~~-~g~~~~~~R~~~~-~~fs~~ 69 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYS-NA-GG--ISFITM-DNPEHKEFRDISA-PYFLPS 69 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC-----C--CGGGGC-CHHHHHHHHHHHH-HHHSHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCC-Cc-cc--cccccC-CchHHHHHHHHhh-hhcCHH
Confidence 579999986 3 89999999999999764 357666522112 22 22 677554 5999999999999 999999
Q ss_pred cccccccCCC
Q 031562 145 SCEILQARPQ 154 (157)
Q Consensus 145 ~l~~~~~~~~ 154 (157)
+++.+.+.++
T Consensus 70 ~l~~~~~~i~ 79 (343)
T 2rfb_A 70 KINDYKDFIE 79 (343)
T ss_dssp HHGGGHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999877654
No 70
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=98.91 E-value=1.1e-09 Score=79.47 Aligned_cols=84 Identities=8% Similarity=0.054 Sum_probs=59.9
Q ss_pred HHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcc-hh-----h-hhccC--CcccccCCCCc
Q 031562 57 EPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLP-TW-----K-IISSN--QHDITSASYGT 127 (157)
Q Consensus 57 ~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~-~~-----~-~~~~~--~~~i~~~~~g~ 127 (157)
+..+.++ ++|||++++. | .+++++++.+++|+.+. +.|.+++.... .. . .+.+. ..++++. ||+
T Consensus 2 ~~~~~~l-r~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-dg~ 74 (367)
T 3b4x_A 2 YDWFKQM-RKESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTS-DPP 74 (367)
T ss_dssp HHHHHHH-HHHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGC-CTT
T ss_pred CHHHHHH-HHcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccC-Cch
Confidence 4456666 4799999987 3 89999999999999754 46766542111 11 1 22111 2567655 599
Q ss_pred chHHHhHhhhhhhcCcccccc
Q 031562 128 TWRVFRRNLSAEILHPLSCEI 148 (157)
Q Consensus 128 ~W~~~R~~~~~~~f~~~~l~~ 148 (157)
.|+++|++++ +.|++++++.
T Consensus 75 ~h~~~R~~~~-~~fs~~~l~~ 94 (367)
T 3b4x_A 75 LHDELRNLTA-DAFNPSNLPV 94 (367)
T ss_dssp HHHHHHHTTG-GGGSGGGSCH
T ss_pred hHHHHHHHHH-HhcCHhhhcc
Confidence 9999999999 9999999876
No 71
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=98.90 E-value=3.9e-10 Score=82.65 Aligned_cols=89 Identities=11% Similarity=0.123 Sum_probs=66.6
Q ss_pred CChHHHHHHHHHhhCCeEEEec-CCccEEEEeCHHHHHHHHHHcCCCCC-C-CCCC--cch-----hhhhccCCcccccC
Q 031562 54 TEIEPILRNLHSKLGPVFTLYV-GPRPAIFIADRSLAHKALVQNGAIFA-D-RPPP--LPT-----WKIISSNQHDITSA 123 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~~~~~-~~~~~i~i~~p~~~~~i~~~~~~~~~-~-~~~~--~~~-----~~~~~~~~~~i~~~ 123 (157)
.+++..+.++ ++|||++++++ ++.+.++++|++.+++++.++ .|. + ++.. ... ....+ .++++.
T Consensus 16 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~ 89 (396)
T 1n40_A 16 DRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVV---NNMGNI 89 (396)
T ss_dssp SSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGG---GHHHHH
T ss_pred cCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhh---hhhhhH
Confidence 4677889999 99999999997 788999999999999999643 455 3 3221 101 11122 566544
Q ss_pred CCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 124 SYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 124 ~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
.|+++|++++ +.|+++ ++.+.+.++
T Consensus 90 ----~h~~~R~~~~-~~fs~~-~~~~~~~i~ 114 (396)
T 1n40_A 90 ----ADAGLRKAVM-KAITPK-APGLEQFLR 114 (396)
T ss_dssp ----HHTTCHHHHH-HHTSSC-STTHHHHHH
T ss_pred ----HHHHHHHHHH-HhhChH-HHHhHHHHH
Confidence 9999999999 999999 988876653
No 72
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=98.83 E-value=4.5e-09 Score=77.79 Aligned_cols=95 Identities=14% Similarity=0.088 Sum_probs=68.5
Q ss_pred CChHHHHHHHHHhhCCeEEEec-CCccEEEEeCHHHHHHHHHHcCCCCCCCCC---Cc--c-----hhhhhccCCccccc
Q 031562 54 TEIEPILRNLHSKLGPVFTLYV-GPRPAIFIADRSLAHKALVQNGAIFADRPP---PL--P-----TWKIISSNQHDITS 122 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~~~~~-~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~---~~--~-----~~~~~~~~~~~i~~ 122 (157)
.+++..+.++.++ |||+++.. ++.+.+++++++.+++++.+. +.|..++. .. . ....+. ..++ +
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~--~~~l-~ 112 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLD--LPNF-I 112 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CC--CCCG-G
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccc--cCcc-c
Confidence 4688888888876 99999987 457899999999999999654 34544331 10 0 001112 1455 4
Q ss_pred CCCCcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 123 ASYGTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 123 ~~~g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
..||+.|+++|++++ +.|++++++.+.+.++
T Consensus 113 ~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~ 143 (426)
T 3rwl_A 113 AMDRPRHDEQRKAVS-PIVAPANLAALEGTIR 143 (426)
T ss_dssp GCCTTHHHHHHHHHG-GGGCHHHHHHHHHHHH
T ss_pred ccCchHHHHHHHHhh-hhhCHHHHHHHHHHHH
Confidence 455999999999999 9999999998877653
No 73
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=98.72 E-value=1.3e-08 Score=75.02 Aligned_cols=96 Identities=17% Similarity=0.074 Sum_probs=64.3
Q ss_pred CChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCC--cchhhhhccCCcccccCCCCcchHH
Q 031562 54 TEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPP--LPTWKIISSNQHDITSASYGTTWRV 131 (157)
Q Consensus 54 ~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~g~~W~~ 131 (157)
.+++..+.++++ +|||++. .+....++++.+.+++++.+. +.|...... ............+.++..||++|++
T Consensus 34 ~dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~Dg~~H~r 109 (412)
T 4dnj_A 34 ADPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTR 109 (412)
T ss_dssp HSCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSSCTTTSCCSSCCCTTTTCCTTHHHH
T ss_pred hCcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcCC-ccccCCCccccccccccccccCCCccccCChHHHHH
Confidence 467777777754 7999754 556789999999999999543 334322111 1011110001133345566999999
Q ss_pred HhHhhhhhhcCcccccccccCCC
Q 031562 132 FRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 132 ~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+|++++ +.|++++++.+.+.++
T Consensus 110 ~R~~~~-~~Fs~~~l~~~~~~i~ 131 (412)
T 4dnj_A 110 TRAVLS-KVLSPATMKRLRDGFA 131 (412)
T ss_dssp HHHHHH-HHTCHHHHHHHHHHHH
T ss_pred HHhhcc-cccCHHHHHHhhHHHH
Confidence 999999 9999999999877653
No 74
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=98.55 E-value=5.2e-09 Score=77.15 Aligned_cols=90 Identities=9% Similarity=-0.035 Sum_probs=63.1
Q ss_pred ChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCC---------CcchhhhhccCCcccccCCC
Q 031562 55 EIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPP---------PLPTWKIISSNQHDITSASY 125 (157)
Q Consensus 55 ~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~i~~~~~ 125 (157)
+++.. ++.++|||++.+..+... +++++++.+++|+.+. .+..... ........+ ++++ ..|
T Consensus 34 ~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~-~~d 104 (416)
T 3p3o_A 34 FSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDK--RLISGFRGLVDMVGTPEGPVRDFMV---DFLQ-SLD 104 (416)
T ss_dssp CCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCT--TEECSHHHHHHHHTCCSSHHHHHHH---HSGG-GCC
T ss_pred CCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCc--ccccCCccccccccccccchhhhhc---Cccc-cCC
Confidence 45555 455679999999886656 9999999999999654 3332211 001112222 4554 455
Q ss_pred CcchHHHhHhhhhhhcCcccccccccCCC
Q 031562 126 GTTWRVFRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 126 g~~W~~~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
|++|+++|++++ +.|++++++.+.+.++
T Consensus 105 g~~h~~~Rr~~~-~~fs~~~l~~~~~~i~ 132 (416)
T 3p3o_A 105 GADHRRLRGLAT-HPFTPRRITAVQPFVR 132 (416)
T ss_dssp HHHHHHHHHTTC-GGGSHHHHHHHHHHHH
T ss_pred chHHHHHHHHHH-HhhCHHHHHHHHHHHH
Confidence 999999999999 9999999998877653
No 75
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=98.51 E-value=2.2e-08 Score=73.32 Aligned_cols=91 Identities=15% Similarity=0.090 Sum_probs=62.0
Q ss_pred ChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhhhhccCCcccccCCCCcchHHHhH
Q 031562 55 EIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWKIISSNQHDITSASYGTTWRVFRR 134 (157)
Q Consensus 55 ~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~W~~~R~ 134 (157)
+++..+.++++ +||++++..+ .+++++++.+++++.+ ..|..++.......... ..+++ +..||+.|+++|+
T Consensus 21 dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d--~~fs~~~~~~~~~~~~~-~~~~l-~~~dg~~h~~~R~ 92 (394)
T 2wiy_A 21 NPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKL--PIMSVEPGWADAGPWAV-ASDTA-LGSDPPHHTVLRR 92 (394)
T ss_dssp CCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTS--TTEECHHHHHTCGGGGG-GGGSG-GGCCTTHHHHHHH
T ss_pred CccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcC--CCccccccccccccchh-ccccc-ccCCchHHHHHHH
Confidence 56777777765 5899987532 6899999999999953 34543211100111111 11455 4556999999999
Q ss_pred hhhhhhcCcccccccccCCC
Q 031562 135 NLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 135 ~~~~~~f~~~~l~~~~~~~~ 154 (157)
+++ +.|++++++.+.+.++
T Consensus 93 ~~~-~~fs~~~~~~~~~~i~ 111 (394)
T 2wiy_A 93 QTN-KWFTPKLVDGWVRTTR 111 (394)
T ss_dssp HHH-TTCSHHHHHHHTHHHH
T ss_pred HHH-hccCHHHHHHHHHHHH
Confidence 999 9999999998877553
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=98.24 E-value=2.5e-06 Score=62.99 Aligned_cols=97 Identities=7% Similarity=0.016 Sum_probs=63.3
Q ss_pred cCChHHHHHHHHHhhC-CeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCcchhhhhccCCcccccCCCCcchHH
Q 031562 53 FTEIEPILRNLHSKLG-PVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPLPTWKIISSNQHDITSASYGTTWRV 131 (157)
Q Consensus 53 ~~~~~~~~~~~~~~yg-~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~W~~ 131 (157)
..+++..+.+++++.+ +++..-. +....++++.+.+++|+.+ .+.|+....... ...+.....++...|+++|++
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~~~-~gg~W~vtr~~dv~~vl~d-~~~fs~~~~~~~--~~~~~~~~~~~~~~D~p~H~r 111 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWTPF-TGGHWIATNGDTVKEVYSD-PTRFSSEVIFLP--KEAGEKAQMVPTKMDPPEHTP 111 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEESS-TTSEEEECSHHHHHHHHTC-TTTEESSCCSSS--TTSSCSSCTTTTTCCTTTHHH
T ss_pred hcChHHHHHHHHhhCCCCEEecCC-CCCEEEECCHHHHHHHHcC-chhccCCCcccc--cccccccccCcccCCcHHHHH
Confidence 3567778877766543 3443322 2357789999999999953 345654332211 111111133445557999999
Q ss_pred HhHhhhhhhcCcccccccccCCC
Q 031562 132 FRRNLSAEILHPLSCEILQARPQ 154 (157)
Q Consensus 132 ~R~~~~~~~f~~~~l~~~~~~~~ 154 (157)
+|++++ +.|++++++.+.+.++
T Consensus 112 ~Rrll~-~~Fs~~~l~~~~~~i~ 133 (417)
T 4dxy_A 112 YRKALD-KGLNLAKIRKVEDKVR 133 (417)
T ss_dssp HHHHHH-HHHCHHHHHTTHHHHH
T ss_pred HHHHhh-hhcCHHHHHHHHHHHH
Confidence 999999 9999999999887654
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=96.41 E-value=0.00037 Score=50.91 Aligned_cols=90 Identities=11% Similarity=0.058 Sum_probs=58.8
Q ss_pred CCC-CccCccccccccc--ccccCChHHHHHHHHHhhCCeEEEecCCccEEEEeCHHHHHHHHHHcCCCCCCCCCCc-ch
Q 031562 34 PPG-PFNVPLIGNLRWL--LKSFTEIEPILRNLHSKLGPVFTLYVGPRPAIFIADRSLAHKALVQNGAIFADRPPPL-PT 109 (157)
Q Consensus 34 ~pg-p~~~p~~G~~~~~--~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~i~i~~p~~~~~i~~~~~~~~~~~~~~~-~~ 109 (157)
+|| ++++|++|+...+ .....+++..+.+++++ |+++.. .+.+++++++.+++|+.+ ..|.+++... ..
T Consensus 36 ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~~~~~~~ 108 (381)
T 2yjn_B 36 IRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDD--PAFTRATGRTPEW 108 (381)
T ss_dssp HHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHC--SSEESSCCCCCHH
T ss_pred CCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCccccccc
Confidence 566 4467889976442 11235788888888865 998764 468999999999999965 4576553211 01
Q ss_pred -------hhhhccCCcccccCCCCcchHHHhHhhhhhhcC
Q 031562 110 -------WKIISSNQHDITSASYGTTWRVFRRNLSAEILH 142 (157)
Q Consensus 110 -------~~~~~~~~~~i~~~~~g~~W~~~R~~~~~~~f~ 142 (157)
...++ .++++. ||++| + +.|+
T Consensus 109 ~~~~~~~~~~~~---~~l~~~-dg~~H-------~-~~Ft 136 (381)
T 2yjn_B 109 MRAAGAPPAEWA---QPFRDV-HAASW-------E-GEVP 136 (381)
T ss_dssp HHHHTCCHHHHT---HHHHHH-HHCCC-------C-SCCC
T ss_pred ccccccccchhh---hhhhhC-Cchhh-------h-hccC
Confidence 11222 556554 49999 5 7777
No 78
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.71 E-value=9.2 Score=21.98 Aligned_cols=62 Identities=16% Similarity=0.134 Sum_probs=42.5
Q ss_pred cccccccccccccCChHHHHHHHHHhhC-CeEEEecCCccEEEEeCHHHHHHHHHH-cCCCCCCCC
Q 031562 41 PLIGNLRWLLKSFTEIEPILRNLHSKLG-PVFTLYVGPRPAIFIADRSLAHKALVQ-NGAIFADRP 104 (157)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yg-~i~~~~~~~~~~i~i~~p~~~~~i~~~-~~~~~~~~~ 104 (157)
..++|+..-. ........+.+++.+|| +|..+ .+|.-.|...+.|.++..+.. +...+..++
T Consensus 12 lYV~NL~~~~-~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~ 75 (96)
T 2diu_A 12 LYVYNLPANK-DGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNR 75 (96)
T ss_dssp EEEESCCTTS-CHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSC
T ss_pred EEEeCCCCcC-CHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCce
Confidence 4477776542 12233456788999995 99998 458899999999999888754 334443443
No 79
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=68.47 E-value=13 Score=20.50 Aligned_cols=52 Identities=13% Similarity=0.142 Sum_probs=35.6
Q ss_pred CCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecC----CccEEEEeCHHHHHHH
Q 031562 36 GPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG----PRPAIFIADRSLAHKA 92 (157)
Q Consensus 36 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~----~~~~i~i~~p~~~~~i 92 (157)
-|....++|++..- --.+.+.+.+.+||+|..+.+. |.-.|-..+++.++.+
T Consensus 9 ~~~~~l~V~~Lp~~-----~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 9 HHGSKVFVGRCTED-----MTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp --CCEEEEESCCTT-----CCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCEEEEeCCCCC-----CCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 34444566776543 3345788889999999999875 3456778889888753
No 80
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=66.50 E-value=16 Score=20.86 Aligned_cols=50 Identities=10% Similarity=0.001 Sum_probs=35.3
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecC--------CccEEEEeCHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG--------PRPAIFIADRSLAHKALV 94 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--------~~~~i~i~~p~~~~~i~~ 94 (157)
..++|++..- --.+.+.+.+.+||+|..+.+. |.-.|...+++.++.++.
T Consensus 13 ~lfV~~Lp~~-----~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~ 70 (103)
T 1s79_A 13 SVYIKGFPTD-----ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE 70 (103)
T ss_dssp CEEEECCCTT-----CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHT
T ss_pred EEEEECCCCC-----CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHH
Confidence 3456666432 2345678888999999888764 335677889999999885
No 81
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=64.19 E-value=20 Score=21.18 Aligned_cols=66 Identities=23% Similarity=0.188 Sum_probs=40.9
Q ss_pred ccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC-------------ccEEEEeCHHHHHHHHHH-cCCCCCCC
Q 031562 38 FNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP-------------RPAIFIADRSLAHKALVQ-NGAIFADR 103 (157)
Q Consensus 38 ~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~-------------~~~i~i~~p~~~~~i~~~-~~~~~~~~ 103 (157)
...-.+.|+..-.-......+.+.+.+.+||+|..+.+.. .-.|-..+++.++..... +...|..+
T Consensus 20 s~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~GR 99 (118)
T 3ue2_A 20 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGR 99 (118)
T ss_dssp CCEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence 3345566665432123457778888899999988876532 234566788888777654 44555443
No 82
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=60.54 E-value=21 Score=20.38 Aligned_cols=63 Identities=22% Similarity=0.291 Sum_probs=42.1
Q ss_pred CCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecC------CccEEEEeCHHHHHHHHHH-cCCCCC
Q 031562 34 PPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG------PRPAIFIADRSLAHKALVQ-NGAIFA 101 (157)
Q Consensus 34 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~------~~~~i~i~~p~~~~~i~~~-~~~~~~ 101 (157)
+|.|....++|++..- --.+.+.+++.+||+|..+.+. +.-.|-..+++.+...+.. +...+.
T Consensus 4 ~~~~~~~l~V~nlp~~-----~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~ 73 (115)
T 3lqv_A 4 PPEVNRILYIRNLPYK-----ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDHLSGFNVS 73 (115)
T ss_dssp CTTCCSEEEEESCCTT-----CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHHHTTCBSS
T ss_pred CCCCCCEEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 4555556677777543 2345678889999998888762 2456778889888888753 444443
No 83
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=56.40 E-value=16 Score=21.40 Aligned_cols=69 Identities=22% Similarity=0.137 Sum_probs=40.1
Q ss_pred CCCCccCcccccccccccc-----cCChHHHHHHHHHhhCCeEEEecC-----CccEEEEeCHHHHHHHHHH-cCCCCCC
Q 031562 34 PPGPFNVPLIGNLRWLLKS-----FTEIEPILRNLHSKLGPVFTLYVG-----PRPAIFIADRSLAHKALVQ-NGAIFAD 102 (157)
Q Consensus 34 ~pgp~~~p~~G~~~~~~~~-----~~~~~~~~~~~~~~yg~i~~~~~~-----~~~~i~i~~p~~~~~i~~~-~~~~~~~ 102 (157)
+|.|...-.+-|+...... .....+.+.+.+.+||+|..+.+. |.-.|-..+++.++..... ++..|..
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~G 82 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAG 82 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 3445555555565544211 123344566777889998888763 3445667788888777654 4444433
No 84
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=55.35 E-value=20 Score=18.49 Aligned_cols=39 Identities=15% Similarity=0.138 Sum_probs=28.8
Q ss_pred HHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHHH
Q 031562 57 EPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 57 ~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~~ 95 (157)
.+.+.+.+.+||++..+.+.. .-.|-..+++.++..+..
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~ 60 (75)
T 1iqt_A 13 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 60 (75)
T ss_dssp HHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTT
T ss_pred HHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHh
Confidence 456788889999988887632 345667888888888854
No 85
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=54.82 E-value=29 Score=20.07 Aligned_cols=40 Identities=13% Similarity=0.143 Sum_probs=32.1
Q ss_pred hHHHHHHHHHhhCCeEEEecCC-ccEEEEeCHHHHHHHHHH
Q 031562 56 IEPILRNLHSKLGPVFTLYVGP-RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 56 ~~~~~~~~~~~yg~i~~~~~~~-~~~i~i~~p~~~~~i~~~ 95 (157)
-...+.+++..||.+..-|+.. .-.+++.+++.+++++..
T Consensus 28 Kt~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 68 (100)
T 1whv_A 28 KTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNT 68 (100)
T ss_dssp CHHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHHH
T ss_pred hhHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 3557788889999877777765 467899999999999974
No 86
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=54.43 E-value=29 Score=19.96 Aligned_cols=52 Identities=13% Similarity=0.101 Sum_probs=36.2
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecC-----C----ccEEEEeCHHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG-----P----RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-----~----~~~i~i~~p~~~~~i~~~ 95 (157)
...++|++..- --.+.+.+++.+||+|..+.+. + .-.|...+++.++..+..
T Consensus 7 ~~lfV~nL~~~-----~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 7 KEVTFARLNDN-----VRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp CEEEEESCCTT-----CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred cEEEEECCCCC-----CCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 34556776533 3355788889999998888653 1 236778899999988754
No 87
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=53.43 E-value=29 Score=19.79 Aligned_cols=48 Identities=25% Similarity=0.231 Sum_probs=32.5
Q ss_pred hHHHHHHHHHhhCCeEEEecCC-----------ccEEEEeCHHHHHHHHHH-cCCCCCCC
Q 031562 56 IEPILRNLHSKLGPVFTLYVGP-----------RPAIFIADRSLAHKALVQ-NGAIFADR 103 (157)
Q Consensus 56 ~~~~~~~~~~~yg~i~~~~~~~-----------~~~i~i~~p~~~~~i~~~-~~~~~~~~ 103 (157)
..+.+.+.+.+||+|..+.+.. .-.|-..+++.++..... +...|..+
T Consensus 28 ~~~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~GR 87 (105)
T 3v4m_A 28 IVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANR 87 (105)
T ss_dssp HHHHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred HHHHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCCC
Confidence 3456777888999999998742 235677888888777644 44444433
No 88
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=52.45 E-value=31 Score=19.72 Aligned_cols=67 Identities=24% Similarity=0.149 Sum_probs=38.8
Q ss_pred CCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecC----------CccEEEEeCHHHHHHHHHH-cCCCCC
Q 031562 35 PGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG----------PRPAIFIADRSLAHKALVQ-NGAIFA 101 (157)
Q Consensus 35 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~----------~~~~i~i~~p~~~~~i~~~-~~~~~~ 101 (157)
+.|.....+.|+..-.-......+.+.+.+.+||+|..+.+. |.-.|-..+++.+...... +...|.
T Consensus 5 ~~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~ 82 (105)
T 2pe8_A 5 KCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFG 82 (105)
T ss_dssp GSCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEET
T ss_pred CCCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEEC
Confidence 344445556666532111233566788888999998887653 1234667788877777654 444443
No 89
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=49.38 E-value=36 Score=19.64 Aligned_cols=56 Identities=20% Similarity=0.070 Sum_probs=38.6
Q ss_pred CCCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecC---CccEEEEeCHHHHHHHHH
Q 031562 34 PPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG---PRPAIFIADRSLAHKALV 94 (157)
Q Consensus 34 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---~~~~i~i~~p~~~~~i~~ 94 (157)
-|.|....++|++..- --.+.+.+++.+||+|..+.+. +.-+|-..+++.++....
T Consensus 12 ~~~~~~~LfV~nLp~~-----vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 12 SGVPSRVIHIRKLPID-----VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CCCCCCEEEECSCCTT-----SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 3444445667777543 2345678899999999888764 345677788888888775
No 90
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=46.98 E-value=38 Score=19.14 Aligned_cols=51 Identities=12% Similarity=-0.058 Sum_probs=36.6
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecC--CccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG--PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--~~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..- --.+.+.+++.+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 17 ~l~V~nLp~~-----~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 17 RVVVSGLPPS-----GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEEESCCSS-----CCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 3456666532 3356778889999998888764 4567778899988888754
No 91
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=43.81 E-value=33 Score=17.62 Aligned_cols=38 Identities=8% Similarity=0.007 Sum_probs=28.1
Q ss_pred HHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHH
Q 031562 57 EPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALV 94 (157)
Q Consensus 57 ~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~ 94 (157)
.+.+.+...+||++..+.+.. .-.|-..+++.++.++.
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~ 59 (75)
T 2mss_A 13 VEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 59 (75)
T ss_dssp HHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHS
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 456788889999988886632 23466788999888874
No 92
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=43.03 E-value=36 Score=18.14 Aligned_cols=52 Identities=23% Similarity=0.319 Sum_probs=34.8
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecC-----C----ccEEEEeCHHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG-----P----RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-----~----~~~i~i~~p~~~~~i~~~ 95 (157)
...++|++..- --.+.+.+.+.+||++..+.+. + .-.|-..+++.++..+..
T Consensus 12 ~~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 72 (87)
T 3s7r_A 12 GKMFVGGLSWD-----TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 72 (87)
T ss_dssp TEEEEECCCTT-----CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHS
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHh
Confidence 34566776543 2345678888999998887653 1 234667788888888743
No 93
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=40.81 E-value=59 Score=19.60 Aligned_cols=51 Identities=22% Similarity=0.260 Sum_probs=34.5
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecCCc-----cEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGPR-----PAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~-----~~i~i~~p~~~~~i~~~ 95 (157)
.-++||+..- --.+.+.+++.+||+|-++.+..+ -+|-..+++.++.....
T Consensus 30 ~I~V~NL~~~-----vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~~ 85 (130)
T 3zzy_A 30 RIIVENLFYP-----VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 85 (130)
T ss_dssp EEEEESCCSC-----CCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH
T ss_pred EEEECCCCCC-----CCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHHH
Confidence 4457777432 234468899999999888766432 56777888777777643
No 94
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=40.62 E-value=41 Score=17.78 Aligned_cols=51 Identities=18% Similarity=0.027 Sum_probs=33.6
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALV 94 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~ 94 (157)
...++|++..- --.+.+.+++.+||++..+.+.. .-.|-..+++.++..+.
T Consensus 6 ~~l~v~nlp~~-----~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 6 SGLYIRGLQPG-----TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp CEEEEESCCTT-----CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred cEEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 34556666433 23446777788999988876532 24567788888888775
No 95
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=40.35 E-value=52 Score=18.84 Aligned_cols=50 Identities=18% Similarity=0.127 Sum_probs=35.2
Q ss_pred cccccccccccccCChHHHHHHHHHhhCCeEEEecCC-------ccEEEEeCHHHHHHHHHH
Q 031562 41 PLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP-------RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~-------~~~i~i~~p~~~~~i~~~ 95 (157)
.++|++..- --.+.+.+++.+||+|..+.+.. .-.|-..+++.++..+..
T Consensus 8 lfV~nLp~~-----~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDKS-----IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCTT-----CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCC-----CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 456666443 23457888999999988776532 246788899999888754
No 96
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=39.97 E-value=50 Score=18.52 Aligned_cols=54 Identities=15% Similarity=0.175 Sum_probs=37.2
Q ss_pred CcccccccccccccCC---hHHHHHHHHHhhCCeEEEecC-------CccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTE---IEPILRNLHSKLGPVFTLYVG-------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~---~~~~~~~~~~~yg~i~~~~~~-------~~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..- .... -.+.+.+.+.+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 17 ~l~V~nLp~~--~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 17 VIVVDNVPQV--GPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEEEESCCCC--CTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEEEeCCCcc--hhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 4567777643 1111 456788899999999998875 3445677888888877754
No 97
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.67 E-value=52 Score=18.65 Aligned_cols=40 Identities=23% Similarity=0.257 Sum_probs=31.1
Q ss_pred hHHHHHHHHHhhCCeEEEecCC----ccEEEEeCHHHHHHHHHH
Q 031562 56 IEPILRNLHSKLGPVFTLYVGP----RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 56 ~~~~~~~~~~~yg~i~~~~~~~----~~~i~i~~p~~~~~i~~~ 95 (157)
-.+.+.+++.+||+|..+.+.+ .-+|-..+++.+...+..
T Consensus 30 te~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 30 SKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp CHHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 3667889999999998887743 345777899988888754
No 98
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=38.85 E-value=67 Score=19.74 Aligned_cols=50 Identities=8% Similarity=0.013 Sum_probs=34.3
Q ss_pred cccccccccccccCChHHHHHHHHHhhCCeEEEecC---------CccEEEEeCHHHHHHHHHH
Q 031562 41 PLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG---------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~i~i~~p~~~~~i~~~ 95 (157)
.++|++..- --.+.+.+++.+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 75 l~V~nLp~~-----~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 133 (165)
T 1rk8_A 75 LFVTSIHEE-----AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 133 (165)
T ss_dssp EEEESCCTT-----CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHH
Confidence 455665432 3355788889999998887653 2345677888888888753
No 99
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=38.37 E-value=48 Score=17.90 Aligned_cols=56 Identities=21% Similarity=0.231 Sum_probs=37.0
Q ss_pred CCCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecC-----C----ccEEEEeCHHHHHHHHHH
Q 031562 35 PGPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG-----P----RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 35 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-----~----~~~i~i~~p~~~~~i~~~ 95 (157)
|.|....+++++..- --.+.+.+++.+||+|..+.+. + .-.|-..+++.++..+..
T Consensus 12 ~~~~~~l~v~nlp~~-----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 12 PDPNCCLGVFGLSLY-----TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CCGGGCEEEESCCSS-----CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCC-----CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 334445566766543 2345688889999998887653 1 235667889988888754
No 100
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=37.33 E-value=47 Score=17.44 Aligned_cols=39 Identities=15% Similarity=0.180 Sum_probs=30.2
Q ss_pred hHHHHHHHHHhhCCeEEEecC-------CccEEEEeCHHHHHHHHH
Q 031562 56 IEPILRNLHSKLGPVFTLYVG-------PRPAIFIADRSLAHKALV 94 (157)
Q Consensus 56 ~~~~~~~~~~~yg~i~~~~~~-------~~~~i~i~~p~~~~~i~~ 94 (157)
-.+.+.+.+.+||++..+.+. +.-.|-..+++.++..+.
T Consensus 20 t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~ 65 (81)
T 2krb_A 20 LKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVK 65 (81)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHT
T ss_pred HHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHH
Confidence 346788889999999988775 334577789998888874
No 101
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=36.98 E-value=65 Score=19.00 Aligned_cols=54 Identities=20% Similarity=0.188 Sum_probs=36.5
Q ss_pred CccCcccccccccccccCChHHHHHHHHHhhCCeEEEecC---------CccEEEEeCHHHHHHHHHH
Q 031562 37 PFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG---------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~i~i~~p~~~~~i~~~ 95 (157)
|....++|++..- --.+.+.+++.+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 45 ~~~~l~V~nLp~~-----~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 45 PNCCLGVFGLSLY-----TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CSSCBCEETCTTS-----CCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3344556666443 2345678888999998888763 1245677899999888864
No 102
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.16 E-value=55 Score=17.89 Aligned_cols=55 Identities=18% Similarity=0.151 Sum_probs=36.2
Q ss_pred CCccCcccccccccccccCChHHHHHHHHHhhCCeE-EEecCC---------ccEEEEeCHHHHHHHHHH
Q 031562 36 GPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVF-TLYVGP---------RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 36 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~-~~~~~~---------~~~i~i~~p~~~~~i~~~ 95 (157)
.+....++|++..- --.+.+.+.+.+||++. .+.+.. .-.|-..+++.++..+..
T Consensus 7 ~~~~~l~V~nLp~~-----~t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 71 (99)
T 2div_A 7 GMAASLWMGDLEPY-----MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 71 (99)
T ss_dssp SSSSEEEECSCCTT-----CCHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHHT
T ss_pred CCccEEEEeCCCCC-----CCHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHHH
Confidence 34445567777543 23456788889999987 765421 235667889988888853
No 103
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=35.61 E-value=18 Score=20.99 Aligned_cols=39 Identities=13% Similarity=0.159 Sum_probs=31.5
Q ss_pred HHHHHHHHHhhCCeEEEecCC-ccEEEEeCHHHHHHHHHH
Q 031562 57 EPILRNLHSKLGPVFTLYVGP-RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 57 ~~~~~~~~~~yg~i~~~~~~~-~~~i~i~~p~~~~~i~~~ 95 (157)
...+.+++..||.+..-|+.. .-.+++.+|+.+++++..
T Consensus 19 t~Di~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 58 (101)
T 3ctr_A 19 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNT 58 (101)
T ss_dssp HHHHHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred hHHHHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 456778888899777778766 467899999999999975
No 104
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=35.37 E-value=62 Score=18.29 Aligned_cols=51 Identities=25% Similarity=0.302 Sum_probs=34.7
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecC---------CccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG---------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..- --.+.+.+++.+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 28 ~l~V~nLp~~-----~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 87 (108)
T 2jrs_A 28 RLYVGSLHFN-----ITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 87 (108)
T ss_dssp EEEEECCCSS-----CCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3456666432 2345678888999998777653 2345778899999888753
No 105
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=35.35 E-value=85 Score=20.14 Aligned_cols=54 Identities=22% Similarity=0.272 Sum_probs=36.9
Q ss_pred CccCcccccccccccccCChHHHHHHHHHhhCCeEEEecC-----C----ccEEEEeCHHHHHHHHHH
Q 031562 37 PFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG-----P----RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-----~----~~~i~i~~p~~~~~i~~~ 95 (157)
|....++|++..- --.+.+.+++++||+|..+.+. + .-.|-..+++.++..+..
T Consensus 14 p~~tlfVgnLp~~-----~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 14 PMASLYVGDLHPD-----VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp -CCEEEEESCCTT-----CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCcEEEEeCCCCC-----CCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 4445667777543 2355778889999998887652 1 245778899988888754
No 106
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.29 E-value=58 Score=17.97 Aligned_cols=57 Identities=18% Similarity=0.083 Sum_probs=38.2
Q ss_pred CCCCccCcccccccccccccCChHHHHHHHHHh-hCCeEEEecC--------CccEEEEeCHHHHHHHHHH
Q 031562 34 PPGPFNVPLIGNLRWLLKSFTEIEPILRNLHSK-LGPVFTLYVG--------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 34 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~-yg~i~~~~~~--------~~~~i~i~~p~~~~~i~~~ 95 (157)
.+.+....++|++..- --.+.+.+++.+ ||+|..+.+. +.-.|-..+++.++..+..
T Consensus 5 ~~~~~~~l~V~nLp~~-----~t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 5 SSGPEYSLFVGDLTPD-----VDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp CSSCCCCEEEECCCTT-----CCHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCCCcEEEEeCCCCC-----CCHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 3444455667777543 234567888888 9998887652 1245677899999888864
No 107
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=34.87 E-value=72 Score=18.90 Aligned_cols=55 Identities=22% Similarity=0.269 Sum_probs=35.5
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecC------CccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~------~~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..-. .....-+.+.+++.+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 31 ~LfV~nL~~~~-~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 31 VVLITNINPEV-PKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEEEESCCTTS-CHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC-CHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 45667775321 1112223466789999999888663 3456778888888888754
No 108
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.81 E-value=74 Score=18.73 Aligned_cols=51 Identities=20% Similarity=0.075 Sum_probs=35.2
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecC---CccEEEEeCHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG---PRPAIFIADRSLAHKALV 94 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---~~~~i~i~~p~~~~~i~~ 94 (157)
...++|++..- --.+.+.+++.+||+|..+.+. +.-+|-..+.+.++..+.
T Consensus 32 ~~LfVgNLp~~-----vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 32 RVIHIRKLPID-----VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp SEEEEESCCTT-----CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 34567777543 2345678899999998887654 345666778888877764
No 109
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.78 E-value=61 Score=17.71 Aligned_cols=39 Identities=18% Similarity=0.255 Sum_probs=29.6
Q ss_pred HHHHHHHHHhhCCeEEEecC---CccEEEEeCHHHHHHHHHH
Q 031562 57 EPILRNLHSKLGPVFTLYVG---PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 57 ~~~~~~~~~~yg~i~~~~~~---~~~~i~i~~p~~~~~i~~~ 95 (157)
.+.+.+++.+||+|..+.++ +.-.|-..+++.++..+..
T Consensus 27 ~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 27 PTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp HHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 45678889999999888764 3345667789988888754
No 110
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=33.72 E-value=63 Score=17.87 Aligned_cols=52 Identities=15% Similarity=0.075 Sum_probs=35.3
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC--------ccEEEEeCHHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP--------RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~--------~~~i~i~~p~~~~~i~~~ 95 (157)
...++|++..- --.+.+.+++.+||+|..+.+.. .-.|-..+++.++..+..
T Consensus 16 ~~l~v~nLp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 75 (105)
T 2dnh_A 16 RKLFVGMLNKQ-----QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHA 75 (105)
T ss_dssp CEEEEESCCTT-----CCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 34556766443 23456788899999988876532 345667889988888753
No 111
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=33.10 E-value=1.2e+02 Score=22.36 Aligned_cols=52 Identities=15% Similarity=0.149 Sum_probs=35.8
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecC---------CccEEEEeCHHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG---------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~i~i~~p~~~~~i~~~ 95 (157)
...++|++..- --...+.+++.+||+|..+.+. +.-+|...+++.+..++..
T Consensus 103 ~~lfV~nL~~~-----~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 163 (437)
T 3pgw_S 103 KTLFVARVNYD-----TTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 (437)
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHH
Confidence 34566776443 2345678888999998888663 2356778888888888754
No 112
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=32.15 E-value=62 Score=17.32 Aligned_cols=51 Identities=14% Similarity=0.096 Sum_probs=34.5
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecC-------CccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG-------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-------~~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..- --.+.+.+++.+||++..+.+. +.-.|-..+++.++..+..
T Consensus 10 ~l~V~nlp~~-----~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 10 QIFVRNLPFD-----FTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EEEECSCCTT-----CCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 3456666432 3355788889999998877653 2245667889988888754
No 113
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.55 E-value=65 Score=17.36 Aligned_cols=57 Identities=26% Similarity=0.319 Sum_probs=37.2
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHHH-cCCCCC
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALVQ-NGAIFA 101 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~~-~~~~~~ 101 (157)
..+++++..- --.+.+.+++.+||++..+.+.. .-.|-..+++.++..+.. +...+.
T Consensus 7 ~l~v~nlp~~-----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~ 73 (95)
T 2dnz_A 7 GLYVGSLHFN-----ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELA 73 (95)
T ss_dssp EEEEESCCTT-----CCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCSS
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCeeC
Confidence 4456666432 23456788889999988876532 345677899999888863 333343
No 114
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=31.18 E-value=76 Score=18.45 Aligned_cols=39 Identities=18% Similarity=0.255 Sum_probs=28.7
Q ss_pred HHHHHHHHHhhCCeEEEecC---CccEEEEeCHHHHHHHHHH
Q 031562 57 EPILRNLHSKLGPVFTLYVG---PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 57 ~~~~~~~~~~yg~i~~~~~~---~~~~i~i~~p~~~~~i~~~ 95 (157)
.+.+.+++.+||+|..+.+. +.-+|-..+.+.++..+..
T Consensus 51 e~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 51 PTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp HHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 55788889999988777654 3455667788888887744
No 115
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.84 E-value=75 Score=17.89 Aligned_cols=51 Identities=18% Similarity=0.055 Sum_probs=35.3
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecC---CccEEEEeCHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG---PRPAIFIADRSLAHKALV 94 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---~~~~i~i~~p~~~~~i~~ 94 (157)
...++|++..- --.+.+.+++.+||.|..+.+. +.-+|-..+.+.++..+.
T Consensus 16 ~~l~V~nLp~~-----~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 16 RVLHIRKLPGE-----VTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp SEEEEESCCTT-----CCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 34567777532 2345677888999998888753 345677788888887774
No 116
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=30.30 E-value=82 Score=18.14 Aligned_cols=51 Identities=16% Similarity=-0.042 Sum_probs=36.2
Q ss_pred CcccccccccccccCChHHHHHHHHHhhC-CeEEEecC-----CccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLG-PVFTLYVG-----PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg-~i~~~~~~-----~~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..- --.+.+.+++.+|| ++..+.+. |.-.|-..+++.++..+..
T Consensus 30 ~l~VgnLp~~-----~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 30 RITMKNLPEG-----CSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEEECSSCC-----CCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC-----CCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 4556776543 34567888999999 78777763 4466778899988888754
No 117
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=29.83 E-value=79 Score=17.83 Aligned_cols=51 Identities=25% Similarity=0.301 Sum_probs=35.4
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..- --.+.+.+++.+||++..+.+.. .-+|-..+.+.++..+..
T Consensus 27 ~lfV~nLp~~-----~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~ 86 (109)
T 2rs2_A 27 KMFIGGLSWQ-----TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 86 (109)
T ss_dssp CEEEESCCTT-----CCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHS
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 4456666432 23456788899999998887632 246778899999988854
No 118
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=29.31 E-value=68 Score=16.88 Aligned_cols=50 Identities=14% Similarity=0.074 Sum_probs=33.6
Q ss_pred cccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHHH
Q 031562 41 PLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~~ 95 (157)
.++|++..- --.+.+.+.+.+||++..+.+.. .-.|-..+++.++..+..
T Consensus 9 l~v~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 9 VFVGDLSPE-----ITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEEESCCTT-----CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 455665432 23456788889999988876522 235667888988888754
No 119
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=28.83 E-value=75 Score=17.23 Aligned_cols=39 Identities=26% Similarity=0.255 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhCCeEEEecC---------CccEEEEeCHHHHHHHHHH
Q 031562 57 EPILRNLHSKLGPVFTLYVG---------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 57 ~~~~~~~~~~yg~i~~~~~~---------~~~~i~i~~p~~~~~i~~~ 95 (157)
.+.+.+++.+||++..+.+. +.-.|-..+++.++..+..
T Consensus 16 ~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 63 (96)
T 2x1f_A 16 EEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRN 63 (96)
T ss_dssp HHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 45678889999999888763 2345677899988888753
No 120
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.61 E-value=78 Score=17.34 Aligned_cols=55 Identities=13% Similarity=0.024 Sum_probs=36.3
Q ss_pred CCccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHHH
Q 031562 36 GPFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 36 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~~ 95 (157)
.+....++|++..- --.+.+.+++.+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 10 ~~~~~l~V~nLp~~-----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 2cqb_A 10 TTKRVLYVGGLAEE-----VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 73 (102)
T ss_dssp CCCSCEEEESCCSS-----CCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCC-----CCHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 34445567777543 23457888889999988877632 234566788888888753
No 121
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.41 E-value=80 Score=17.43 Aligned_cols=53 Identities=19% Similarity=0.274 Sum_probs=35.5
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHHHc
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALVQN 96 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~~~ 96 (157)
...+++++..- --.+.+.+++.+||+|..+.+.. .-+|-..+++.++.++..+
T Consensus 17 ~~l~V~nlp~~-----~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~ 78 (105)
T 2dh8_A 17 GKLFVGGLDWS-----TTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 78 (105)
T ss_dssp SEECCBSCCTT-----CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHC
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhC
Confidence 34556666433 23456788889999988776532 2346678888888888653
No 122
>1why_A Hypothetical protein riken cDNA 1810017N16; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.29 E-value=77 Score=17.21 Aligned_cols=52 Identities=15% Similarity=0.027 Sum_probs=36.0
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---ccEEEEeCHHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---~~~i~i~~p~~~~~i~~~ 95 (157)
...++|++..- --.+.+.+++.+||+|..+.+.. .-.|-..+++.++..+..
T Consensus 18 ~~l~V~nlp~~-----~t~~~l~~~F~~~G~v~~v~~~~~~g~afV~f~~~~~A~~A~~~ 72 (97)
T 1why_A 18 TRLWVGGLGPN-----TSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAK 72 (97)
T ss_dssp SCEEEECCCSS-----CCHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHhcCCeeEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 34556666433 23456788899999998887643 355667889988888753
No 123
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.21 E-value=80 Score=17.36 Aligned_cols=51 Identities=24% Similarity=0.232 Sum_probs=35.4
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..- --.+.+.+++.+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 15 ~l~V~nLp~~-----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2dnm_A 15 TLKVDNLTYR-----TSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74 (103)
T ss_dssp EEEEESCCTT-----CCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHH
Confidence 4556666543 23456788899999998887642 345777888888888753
No 124
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=28.00 E-value=1.2e+02 Score=19.16 Aligned_cols=50 Identities=22% Similarity=0.244 Sum_probs=34.3
Q ss_pred cccccccccccccCChHHHHHHHHHhhCCeEEEecC-----CccEEEEeCHHHHHHHHHH
Q 031562 41 PLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG-----PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-----~~~~i~i~~p~~~~~i~~~ 95 (157)
.++|++..- --.+.+.+.+.+||+|-.+.+. +.-+|-..|.+.+++....
T Consensus 49 l~VgNL~~~-----vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 49 IIVENLFYP-----VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EEECSCCSC-----CCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCcCCC-----CCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 346666432 2345688899999998888763 2356778888888877754
No 125
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.32 E-value=80 Score=17.11 Aligned_cols=51 Identities=25% Similarity=0.242 Sum_probs=34.8
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecC------------CccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG------------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~------------~~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..- --.+.+.+++.+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 7 ~l~V~nLp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 7 GLFIKNLNFS-----TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp CEEEESCCTT-----CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 3456666432 2345678888999998777653 1345677899999988864
No 126
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=27.26 E-value=85 Score=17.36 Aligned_cols=51 Identities=20% Similarity=0.228 Sum_probs=34.0
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecC--------CccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG--------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--------~~~~i~i~~p~~~~~i~~~ 95 (157)
..+++++..- --.+.+.+++.+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 31 ~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 31 KLLVSNLDFG-----VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp EEEEESCCTT-----CCHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 3456665432 2345678888999998777653 1245667788988888754
No 127
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.18 E-value=91 Score=17.66 Aligned_cols=54 Identities=17% Similarity=0.050 Sum_probs=37.7
Q ss_pred CccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---ccEEEEeCHHHHHHHHH
Q 031562 37 PFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---RPAIFIADRSLAHKALV 94 (157)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---~~~i~i~~p~~~~~i~~ 94 (157)
|....++|++..- .--.+.+.+++.+||.|..+++.. .-+|-..+.+.+.....
T Consensus 14 p~~~l~V~nLp~~----~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 14 TRRVVHIMDFQRG----KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp CCCEEEEESCCCS----SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCCC----cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 4444567777541 233456788899999999988653 35677888888888775
No 128
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=26.70 E-value=87 Score=17.27 Aligned_cols=56 Identities=14% Similarity=0.073 Sum_probs=36.6
Q ss_pred Cccccccccccc-ccCChHHHHHHHHHhhCCeEEEecC---------CccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLK-SFTEIEPILRNLHSKLGPVFTLYVG---------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~-~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~i~i~~p~~~~~i~~~ 95 (157)
.-++|++..... ......+.+.+.+.+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 8 ~vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 73 (100)
T 3ns6_A 8 YIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKS 73 (100)
T ss_dssp EEEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHH
Confidence 345666654310 0123345678888999999988765 2345778899888888753
No 129
>2dit_A HIV TAT specific factor 1 variant; structural genomics, RRM_1 domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.62 E-value=93 Score=17.59 Aligned_cols=62 Identities=21% Similarity=0.114 Sum_probs=37.0
Q ss_pred CCCCccCccccccccccc-cc-----CChHHHHHHHHHhhCCeEEEecC-----CccEEEEeCHHHHHHHHHH
Q 031562 34 PPGPFNVPLIGNLRWLLK-SF-----TEIEPILRNLHSKLGPVFTLYVG-----PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 34 ~pgp~~~p~~G~~~~~~~-~~-----~~~~~~~~~~~~~yg~i~~~~~~-----~~~~i~i~~p~~~~~i~~~ 95 (157)
-|.|....++.|+..... .. ....+.+.+.+.+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 11 ~~~~s~~l~l~Nl~~~~~~~~~~~~~~~~e~~l~~~f~~~G~v~~v~i~~~~~~G~afV~f~~~~~A~~Ai~~ 83 (112)
T 2dit_A 11 RMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQT 83 (112)
T ss_dssp CCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHH
T ss_pred CCCCceEEEEEcCCCHHHhccCHHHHHHHHHHHHHHHHccCCEeEEEEecCCCCEEEEEEECCHHHHHHHHHH
Confidence 344555556666643210 00 11245677888999988777653 3445667788888877754
No 130
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=26.58 E-value=85 Score=17.12 Aligned_cols=52 Identities=13% Similarity=0.080 Sum_probs=32.9
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEE--------EecC---------CccEEEEeCHHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFT--------LYVG---------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~--------~~~~---------~~~~i~i~~p~~~~~i~~~ 95 (157)
...++|++..- --.+.+.+++.+||++.. +.+. |.-.|-..+.+.++..+..
T Consensus 14 ~~l~V~nLp~~-----~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~~ 82 (99)
T 2la6_A 14 NTIFVQGLGEN-----VTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDW 82 (99)
T ss_dssp SEEEEECCCSS-----CCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHHH
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 34556666443 334567888899998765 4331 1234667788888888753
No 131
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.55 E-value=81 Score=16.89 Aligned_cols=51 Identities=20% Similarity=0.212 Sum_probs=35.6
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALV 94 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~ 94 (157)
...+++++..- --.+.+.+++.+||+|..+.+.. .-.|-..+++.++..+.
T Consensus 17 ~~l~V~nlp~~-----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 76 (94)
T 2e5h_A 17 STVYVSNLPFS-----LTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTR 76 (94)
T ss_dssp TSEEEESCCTT-----SCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCCC-----CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHH
Confidence 34566766532 23456788889999998887632 34677889998888874
No 132
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=26.45 E-value=95 Score=17.67 Aligned_cols=58 Identities=12% Similarity=-0.005 Sum_probs=38.7
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecC--CccEEEEeCHHHHHHHHHH-cCCCCCC
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG--PRPAIFIADRSLAHKALVQ-NGAIFAD 102 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--~~~~i~i~~p~~~~~i~~~-~~~~~~~ 102 (157)
..++|++..- --.+.+.+++.+||+|..+.+. +.-+|-..+++.++..+.. +...+..
T Consensus 18 ~l~V~nLp~~-----~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 78 (115)
T 3beg_B 18 RVVVSGLPPS-----GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS 78 (115)
T ss_dssp CEEEEECCSS-----CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCC
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 3556776543 1233577888999999888764 4566778899988888764 3444433
No 133
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=26.20 E-value=84 Score=16.95 Aligned_cols=55 Identities=22% Similarity=0.312 Sum_probs=36.2
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecC------CccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~------~~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..-. ........+.+.+.+||++..+.+. +.-.|-..+++.++..+..
T Consensus 10 ~l~V~nLp~~~-~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 10 TIYINNLNEKI-KKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEEEESCCTTS-CHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC-CHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 45567765421 1122223444889999999888765 4566778899988888754
No 134
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=25.95 E-value=1.1e+02 Score=18.27 Aligned_cols=39 Identities=5% Similarity=-0.013 Sum_probs=29.4
Q ss_pred hHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHH
Q 031562 56 IEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALV 94 (157)
Q Consensus 56 ~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~ 94 (157)
-.+.+.+.+.+||++..+.+.. .-.|-..+++.+..++.
T Consensus 100 t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 147 (167)
T 2cjk_A 100 RPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQ 147 (167)
T ss_dssp CHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHh
Confidence 3456788889999988887542 24567789999998885
No 135
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=25.92 E-value=90 Score=17.21 Aligned_cols=50 Identities=8% Similarity=0.042 Sum_probs=34.1
Q ss_pred cccccccccccccCChHHHHHHHHHhhCCeEEEecC---------CccEEEEeCHHHHHHHHHH
Q 031562 41 PLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG---------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~i~i~~p~~~~~i~~~ 95 (157)
.++|++..- --.+.+.+++.+||+|..+.+. +.-.|-..+.+.++..+..
T Consensus 26 l~V~nlp~~-----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 26 LFVTGVHEE-----ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEEECCCTT-----CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 456665432 2345678889999998888653 2245667899988888753
No 136
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.53 E-value=89 Score=17.00 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=34.9
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecC------CccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~------~~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..-. ......+.+.+.+.+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 11 ~l~V~nL~~~~-~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~~ 71 (96)
T 2dgx_A 11 DVQVSNIDYRL-SRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNS 71 (96)
T ss_dssp EEEEESCCTTS-CHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCCC-CHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHHH
Confidence 35567765431 1122223344889999999888764 2345677888888888753
No 137
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.33 E-value=85 Score=16.72 Aligned_cols=54 Identities=20% Similarity=0.154 Sum_probs=37.6
Q ss_pred CccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC-ccEEEEeCHHHHHHHHHH
Q 031562 37 PFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP-RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~-~~~i~i~~p~~~~~i~~~ 95 (157)
+....++|++..- --.+.+.+++.+||+|..+.+.. .-.|-..+++.++..+..
T Consensus 8 ~~~~l~V~nlp~~-----~t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~~ 62 (90)
T 2dnp_A 8 NTWKIFVGNVSAA-----CTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQ 62 (90)
T ss_dssp CSCCEEEESCCTT-----CCHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC-----CCHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 3344567776543 23456788889999998887643 466778899988888753
No 138
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=25.13 E-value=1e+02 Score=17.59 Aligned_cols=51 Identities=22% Similarity=0.220 Sum_probs=34.7
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecC--------CccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG--------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--------~~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..- --.+.+.+++.+||+|..+.+. +.-.|-..+.+.++..+..
T Consensus 9 ~l~V~nLp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 9 KLFIGGLNRE-----TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp EEEEECCTTT-----CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3456666432 2345678889999988777653 2345677899999888864
No 139
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=24.96 E-value=93 Score=17.04 Aligned_cols=51 Identities=18% Similarity=0.174 Sum_probs=35.3
Q ss_pred cccccccccccccCChHHHHHHHHHhhCCeEEEecC-CccEEEEeCHHHHHHHHHH
Q 031562 41 PLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG-PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-~~~~i~i~~p~~~~~i~~~ 95 (157)
-++|++..- .--.+.+.+++.+||+|..+.+. +.-.|-..+.+.++..+..
T Consensus 25 l~V~nLp~~----~~t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 25 LFIGNLPLK----NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp EEEESCCSS----CCCHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCcc----cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 455665430 22345678889999999888763 3466777889988888753
No 140
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.95 E-value=84 Score=16.67 Aligned_cols=47 Identities=21% Similarity=0.299 Sum_probs=32.5
Q ss_pred cccccccccccccCChHHHHHHHHHhhCCeEEEecC----CccEEEEeCHHHHHHH
Q 031562 41 PLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG----PRPAIFIADRSLAHKA 92 (157)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~----~~~~i~i~~p~~~~~i 92 (157)
.++|++..- --.+.+.+.+.+||+|..+.+. +.-.|-..+++.++++
T Consensus 8 l~V~nLp~~-----~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~ 58 (88)
T 1wf0_A 8 VFVGRCTGD-----MTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 58 (88)
T ss_dssp EEEESCCSS-----SCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHT
T ss_pred EEEeCCCCC-----CCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHH
Confidence 445666432 2345678888999999888775 3456777888888754
No 141
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=24.78 E-value=1.3e+02 Score=18.59 Aligned_cols=54 Identities=17% Similarity=0.110 Sum_probs=37.1
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHHHcC
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALVQNG 97 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~~~~ 97 (157)
...++|++..- --.+.+.+++.+||+|..+.+.. .-.|-..+++.++..+..+.
T Consensus 14 ~~l~V~nLp~~-----~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~~ 76 (196)
T 1l3k_A 14 RKLFIGGLSFE-----TTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARP 76 (196)
T ss_dssp GEEEEESCCTT-----CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCS
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcCC
Confidence 34566776543 23456788899999987775421 34577889999999986533
No 142
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.74 E-value=93 Score=16.95 Aligned_cols=51 Identities=18% Similarity=0.139 Sum_probs=34.8
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecC--------CccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG--------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--------~~~~i~i~~p~~~~~i~~~ 95 (157)
..+++++..- --.+.+.+++.+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 19 ~l~v~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 19 KLFISGLPFS-----CTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp CEEEESCCTT-----CCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 4456666432 2345678888999998887653 2345778899998888754
No 143
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=24.31 E-value=96 Score=16.94 Aligned_cols=39 Identities=21% Similarity=0.196 Sum_probs=29.1
Q ss_pred HHHHHHHHHhhCCeEEEecC----CccEEEEeCHHHHHHHHHH
Q 031562 57 EPILRNLHSKLGPVFTLYVG----PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 57 ~~~~~~~~~~yg~i~~~~~~----~~~~i~i~~p~~~~~i~~~ 95 (157)
.+.+.+++.+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 14 ~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 56 (101)
T 2hvz_A 14 KGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 56 (101)
T ss_dssp HHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHH
Confidence 45678888999998777653 3455677889988888753
No 144
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=24.17 E-value=92 Score=16.69 Aligned_cols=51 Identities=20% Similarity=0.207 Sum_probs=34.4
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC--------ccEEEEeCHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP--------RPAIFIADRSLAHKALV 94 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~--------~~~i~i~~p~~~~~i~~ 94 (157)
...+++++..- --.+.+.+++.+||+|..+.+.. .-.|-..+++.++..+.
T Consensus 17 ~~l~v~nlp~~-----~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 17 RTVFVGNLEAR-----VREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp GEEEEECCCTT-----CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred CEEEEECCCCC-----CCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 34456666433 23456888899999988876532 24566778888888875
No 145
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.84 E-value=1.1e+02 Score=17.26 Aligned_cols=38 Identities=13% Similarity=0.043 Sum_probs=27.6
Q ss_pred hHHHHHHHHHhhCCeEEEecC---------CccEEEEeCHHHHHHHH
Q 031562 56 IEPILRNLHSKLGPVFTLYVG---------PRPAIFIADRSLAHKAL 93 (157)
Q Consensus 56 ~~~~~~~~~~~yg~i~~~~~~---------~~~~i~i~~p~~~~~i~ 93 (157)
-.+.+.+++.+||+|..+.+. +.-+|-..+++.++..+
T Consensus 38 t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~ 84 (114)
T 2cq4_A 38 RPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 84 (114)
T ss_dssp CHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH
T ss_pred CHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHH
Confidence 345678888999999888764 12456677787777777
No 146
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.77 E-value=1.1e+02 Score=17.30 Aligned_cols=51 Identities=14% Similarity=0.098 Sum_probs=35.6
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecC---CccEEEEeCHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG---PRPAIFIADRSLAHKALV 94 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---~~~~i~i~~p~~~~~i~~ 94 (157)
...++|++..- --.+.+.+++.+||+|..+.+. +.-+|-..+.+.++..+.
T Consensus 16 ~~l~V~nLp~~-----~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 16 PVVHVRGLCES-----VVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp SEEEEESCCSS-----CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 44567776432 2345678899999998888753 335677788888887764
No 147
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.60 E-value=98 Score=16.81 Aligned_cols=56 Identities=18% Similarity=0.056 Sum_probs=37.4
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHHHcCCCC
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALVQNGAIF 100 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~~~~~~~ 100 (157)
..++|++..- --.+.+.+++.+||+|..+.+.. .-.|-..+.+.++..+.-+...+
T Consensus 12 ~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~ 76 (99)
T 2dgs_A 12 KIFVGGIPHN-----CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDI 76 (99)
T ss_dssp EEEEESCCSS-----CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBS
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEE
Confidence 4556666433 23456788889999998887632 24567789999988886444333
No 148
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.55 E-value=1e+02 Score=16.92 Aligned_cols=52 Identities=13% Similarity=0.180 Sum_probs=35.7
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecC-------CccEEEEeCHHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG-------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-------~~~~i~i~~p~~~~~i~~~ 95 (157)
...+++++..- --.+.+.+++.+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 16 ~~l~V~nlp~~-----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 16 KRLHVSNIPFR-----FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp CEEEEESCCTT-----CCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 34556666433 2345678888999998887663 2346777899998888753
No 149
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=23.41 E-value=1e+02 Score=19.69 Aligned_cols=41 Identities=10% Similarity=0.049 Sum_probs=30.7
Q ss_pred ChHHHHHHHHHhhCCeEEEecC--------CccEEEEeCHHHHHHHHHH
Q 031562 55 EIEPILRNLHSKLGPVFTLYVG--------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 55 ~~~~~~~~~~~~yg~i~~~~~~--------~~~~i~i~~p~~~~~i~~~ 95 (157)
.-.+.+.+++.+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 121 ~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~ 169 (193)
T 2voo_A 121 ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 169 (193)
T ss_dssp CCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHC
T ss_pred CCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHh
Confidence 3456788899999998877653 2355777899999988853
No 150
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.10 E-value=55 Score=18.55 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=34.9
Q ss_pred CcccccccccccccCChHHHHH---HHHHhhCCeEEEecCC------------ccEEEEeCHHHHHHHHHH-cCCCC
Q 031562 40 VPLIGNLRWLLKSFTEIEPILR---NLHSKLGPVFTLYVGP------------RPAIFIADRSLAHKALVQ-NGAIF 100 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~---~~~~~yg~i~~~~~~~------------~~~i~i~~p~~~~~i~~~-~~~~~ 100 (157)
..++|++..- --.+.+. +++.+||+|..+.+.. .-.|-..+++.++..+.. +...+
T Consensus 17 ~l~V~nLp~~-----~~~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~ 88 (111)
T 2cpi_A 17 LVFVVGLSQR-----LADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVV 88 (111)
T ss_dssp CEEEEEECTT-----TCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEE
T ss_pred EEEEECCCCC-----CCHHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHHhCCCEE
Confidence 3456666543 1122345 7788999988876532 345667889988888765 44333
No 151
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.00 E-value=1e+02 Score=16.86 Aligned_cols=54 Identities=19% Similarity=0.050 Sum_probs=36.5
Q ss_pred CccCcccccccccccccCChHHHHHHHHHhhCCeEEEecC-------CccEEEEeCHHHHHHHHHH
Q 031562 37 PFNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG-------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-------~~~~i~i~~p~~~~~i~~~ 95 (157)
+....++|++..- --.+.+.+++.+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 14 ~~~~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2d9p_A 14 QVVNLYVKNLDDG-----IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 74 (103)
T ss_dssp SCCCEEEECCCTT-----CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHH
Confidence 3445567776543 2245677888899998887654 2345677899999888864
No 152
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.58 E-value=1.1e+02 Score=16.85 Aligned_cols=51 Identities=22% Similarity=0.186 Sum_probs=36.3
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..- --.+.+.+++.+||+|..+.+.. .-.|-..+++.++..+..
T Consensus 17 ~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (105)
T 1x5u_A 17 TVYVGGLDEK-----VSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 76 (105)
T ss_dssp EEEEECCCTT-----CCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHH
Confidence 3456666433 23456888899999998887643 245778899999988864
No 153
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=21.96 E-value=96 Score=16.12 Aligned_cols=52 Identities=13% Similarity=0.052 Sum_probs=35.2
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~~ 95 (157)
...++|++..- --.+.+.+.+.+||++..+.+.. .-.|-..+++.++..+..
T Consensus 8 ~~l~V~nl~~~-----~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 68 (85)
T 3mdf_A 8 RVLYVGGLAEE-----VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 68 (85)
T ss_dssp SEEEEECCCTT-----CCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCCC-----CCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHHH
Confidence 34456666432 23457788899999998887632 245778888888888743
No 154
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.78 E-value=1.1e+02 Score=16.90 Aligned_cols=53 Identities=19% Similarity=0.115 Sum_probs=36.8
Q ss_pred ccCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHHH
Q 031562 38 FNVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 38 ~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~~ 95 (157)
....++|++..- --.+.+.+++.+||+|..+.+.. .-+|-..+.+.++..+..
T Consensus 15 ~~~l~V~nLp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 15 GKTVFIRNLSFD-----SEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp CCCEEEESCCTT-----CCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred CCEEEEECCCCC-----CCHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 344567776543 23456788889999998887651 245667899999888864
No 155
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.60 E-value=1.1e+02 Score=16.58 Aligned_cols=51 Identities=24% Similarity=0.166 Sum_probs=35.4
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---------ccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---------RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~i~i~~p~~~~~i~~~ 95 (157)
..+++++..- --.+.+.+++.+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 10 ~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 10 RLFVRNLSYT-----SSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp EEEEECCCTT-----CCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 3456666432 23456788899999998887642 345778899998888843
No 156
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=21.45 E-value=1.2e+02 Score=16.89 Aligned_cols=50 Identities=8% Similarity=0.013 Sum_probs=35.0
Q ss_pred cccccccccccccCChHHHHHHHHHhhCCeEEEecC---------CccEEEEeCHHHHHHHHHH
Q 031562 41 PLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG---------PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~i~i~~p~~~~~i~~~ 95 (157)
.++|++..- --.+.+.+++.+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 29 l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 87 (110)
T 1oo0_B 29 LFVTSIHEE-----AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 87 (110)
T ss_dssp EEEESCCTT-----CCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 456666432 2345678889999999888774 2345677899988888753
No 157
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=21.18 E-value=1.7e+02 Score=18.73 Aligned_cols=50 Identities=16% Similarity=0.036 Sum_probs=35.7
Q ss_pred Cccccccc-ccccccCChHHHHHHHHHhhCCeEEEecC----CccEEEEeCHHHHHHHHH
Q 031562 40 VPLIGNLR-WLLKSFTEIEPILRNLHSKLGPVFTLYVG----PRPAIFIADRSLAHKALV 94 (157)
Q Consensus 40 ~p~~G~~~-~~~~~~~~~~~~~~~~~~~yg~i~~~~~~----~~~~i~i~~p~~~~~i~~ 94 (157)
..++|++. .- --.+.+.+++.+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 6 ~l~V~nL~~~~-----~~~~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~ 60 (205)
T 3tyt_A 6 VLMVYGLDQSK-----MNCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAIT 60 (205)
T ss_dssp EEEEECCCTTT-----CCHHHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCccc-----CCHHHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHH
Confidence 35567775 22 2234678889999999998764 346788889988887774
No 158
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.95 E-value=1.2e+02 Score=16.65 Aligned_cols=51 Identities=22% Similarity=0.179 Sum_probs=35.0
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecCC-------ccEEEEeCHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP-------RPAIFIADRSLAHKALV 94 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~-------~~~i~i~~p~~~~~i~~ 94 (157)
...++|++..- --.+.+.+++.+||+|..+.+.. .-+|-..+++.++..+.
T Consensus 16 ~~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 16 RTLYVGNLSRD-----VTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp CEEEEESCCTT-----CCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCcc-----CCHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 34556666432 23456788889999988876532 34577788988888875
No 159
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.88 E-value=1.1e+02 Score=16.55 Aligned_cols=51 Identities=27% Similarity=0.260 Sum_probs=33.6
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecCC---ccEEEEeCHHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---~~~i~i~~p~~~~~i~~~ 95 (157)
..++|++..- --.+.+.+++.+||+|..+.+.. .-.|-..+++.++..+..
T Consensus 17 ~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~~ 70 (99)
T 2cpj_A 17 RLFVGNLPPD-----ITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVE 70 (99)
T ss_dssp EEEEESCCTT-----CCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHH
T ss_pred EEEEeCCCCC-----CCHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence 4556666443 23456788889999988876543 345566788888777643
No 160
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.59 E-value=1.1e+02 Score=16.25 Aligned_cols=52 Identities=25% Similarity=0.283 Sum_probs=36.1
Q ss_pred cCcccccccccccccCChHHHHHHHHHhhCCeEEEecC-CccEEEEeCHHHHHHHHHH
Q 031562 39 NVPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG-PRPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-~~~~i~i~~p~~~~~i~~~ 95 (157)
...++|++..- --.+.+.+++.+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 9 ~~l~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~~ 61 (90)
T 2dnq_A 9 VKLFIGNLPRE-----ATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRN 61 (90)
T ss_dssp EEEEEESCCSS-----CCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHHH
T ss_pred eEEEEeCCCCC-----CCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 34556666443 2345678889999998887653 3466778899988888743
No 161
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=20.50 E-value=1.6e+02 Score=18.02 Aligned_cols=40 Identities=20% Similarity=0.254 Sum_probs=30.1
Q ss_pred hHHHHHHHHHhhC--CeEEEecC-----C----ccEEEEeCHHHHHHHHHH
Q 031562 56 IEPILRNLHSKLG--PVFTLYVG-----P----RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 56 ~~~~~~~~~~~yg--~i~~~~~~-----~----~~~i~i~~p~~~~~i~~~ 95 (157)
-.+.+.+++.+|| ++..+.+. + .-+|-..+++.++..+..
T Consensus 68 te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~ 118 (156)
T 3n9u_C 68 TDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLEL 118 (156)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3567888899999 88887652 2 245778899999988865
No 162
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.44 E-value=1.1e+02 Score=15.99 Aligned_cols=50 Identities=28% Similarity=0.182 Sum_probs=35.1
Q ss_pred CcccccccccccccCChHHHHHHHHHhhCCeEEEecC---CccEEEEeCHHHHHHHHH
Q 031562 40 VPLIGNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVG---PRPAIFIADRSLAHKALV 94 (157)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---~~~~i~i~~p~~~~~i~~ 94 (157)
..++|++..- --.+.+.+.+.+||++..+.+. +.-.|-..+++.++..+.
T Consensus 14 ~l~V~~l~~~-----~t~~~l~~~f~~~G~i~~~~~~~~kg~afV~f~~~~~A~~a~~ 66 (85)
T 2ytc_A 14 TLYVGGLGDT-----ITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAE 66 (85)
T ss_dssp CEEEECCTTT-----SCHHHHHHHHHTTSCEEEEEEEGGGTEEEEEESSHHHHHHHHH
T ss_pred EEEEcCCCCC-----CCHHHHHHHHHhCCCEeEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 4556666433 2345678888999998887654 345567789999988885
No 163
>2cq2_A Hypothetical protein LOC91801; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.20 E-value=1.4e+02 Score=17.37 Aligned_cols=55 Identities=18% Similarity=0.056 Sum_probs=37.4
Q ss_pred CCccCccc--ccccccccccCChHHHHHHHHHhhCCeEEEecCC---ccEEEEeCHHHHHHHHHH
Q 031562 36 GPFNVPLI--GNLRWLLKSFTEIEPILRNLHSKLGPVFTLYVGP---RPAIFIADRSLAHKALVQ 95 (157)
Q Consensus 36 gp~~~p~~--G~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---~~~i~i~~p~~~~~i~~~ 95 (157)
.|....++ |++..- --.+.+.+.+.+||.|-.+.+.. .-+|-..+++.+++.+..
T Consensus 23 ~pt~~L~V~Ng~L~~~-----~te~~L~~~F~~fG~v~~v~i~~~rgfaFV~f~~~~~A~~Ai~~ 82 (114)
T 2cq2_A 23 YATQSLVVANGGLGNG-----VSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVT 82 (114)
T ss_dssp SCCSEEEEETCTGGGT-----CCHHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCC-----CCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 34444566 555432 33467889999999998887743 355677788888888754
Done!