BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031565
(157 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CQK7|RWDD1_MOUSE RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1
Length = 243
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 76/128 (59%), Gaps = 11/128 (8%)
Query: 1 MTDHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVE 60
MTD+ +EQ E+EALE+I D F + L+ S F +T++ + E DE+ V+
Sbjct: 1 MTDYGEEQRNELEALESIYPDSF-------TVLSESPPSFTITVTSEAGENDET----VQ 49
Query: 61 LALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKE 120
L F+++EKYPDE PL + S ++ D+ + + L +A ENLGM MI+TLVT+ +E
Sbjct: 50 TTLKFTYSEKYPDETPLYEIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQE 109
Query: 121 WLSERYSQ 128
L+E Q
Sbjct: 110 KLNEIVDQ 117
>sp|Q9H446|RWDD1_HUMAN RWD domain-containing protein 1 OS=Homo sapiens GN=RWDD1 PE=1 SV=1
Length = 243
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 76/128 (59%), Gaps = 11/128 (8%)
Query: 1 MTDHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVE 60
MTD+ +EQ E+EALE+I D F + L+ + F +T++ + E DE+ V+
Sbjct: 1 MTDYGEEQRNELEALESIYPDSF-------TVLSENPPSFTITVTSEAGENDET----VQ 49
Query: 61 LALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKE 120
L F+++EKYPDE PL + S ++ D+ + + L +A ENLGM MI+TLVT+ +E
Sbjct: 50 TTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQE 109
Query: 121 WLSERYSQ 128
L+E Q
Sbjct: 110 KLNEIVDQ 117
>sp|Q99ND9|RWDD1_RAT RWD domain-containing protein 1 OS=Rattus norvegicus GN=Rwdd1 PE=2
SV=1
Length = 243
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 76/128 (59%), Gaps = 11/128 (8%)
Query: 1 MTDHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVE 60
MTD+ +EQ E+EALE+I D F + L+ + F +T++ + E DE+ V+
Sbjct: 1 MTDYGEEQRNELEALESIYPDSF-------TVLSENPPSFTITVTSEAGENDET----VQ 49
Query: 61 LALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKE 120
L F+++EKYPDE PL + S ++ D+ + + L +A ENLGM MI+TLVT+ +E
Sbjct: 50 TTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQE 109
Query: 121 WLSERYSQ 128
L+E Q
Sbjct: 110 KLNEIVDQ 117
>sp|Q9HGN1|GCN2_SCHPO Serine/threonine-protein kinase gcn2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=gcn2 PE=2 SV=2
Length = 1576
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 8 QEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSH 67
QE EIEAL+AI MD+F+E+ + T+ + + L + A+ ++ ++L +
Sbjct: 14 QENEIEALKAIFMDDFEELKVRNAWNVTNGHVYCIHLCSR--SANSKSIAKLDLCIELGR 71
Query: 68 TEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAK----EWLS 123
+ YP P++ +++ + ++ L +KL+ +A + LG MI+ L + + +W S
Sbjct: 72 S--YPYVKPVIKLQNGENVLNSQIRFLLDKLDTKAKDLLGEEMIFELASIVQDYLNDWQS 129
Query: 124 ERYSQDAGIDNTGEEELEKDE 144
+ SQ A ++ +L+ D
Sbjct: 130 DLSSQFASLEEERAVQLKHDR 150
>sp|Q9P2K8|E2AK4_HUMAN Eukaryotic translation initiation factor 2-alpha kinase 4 OS=Homo
sapiens GN=EIF2AK4 PE=1 SV=3
Length = 1649
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 6 QEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIF 65
Q Q+ E++ALEAI +F+++ G + L PQ +E V++ L
Sbjct: 21 QRQDHELQALEAIYGADFQDLRPDACGPVKEPPEINLVLYPQGLTGEEVY---VKVDLRV 77
Query: 66 SHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWLSE 124
YPD P + +K+ +G+ + +LK +LE+ A ++ G MI+ L + +LSE
Sbjct: 78 KCPPTYPDVVPEIELKNAKGLSNESVNLLKSRLEELAKKHCGEVMIFELAYHVQSFLSE 136
>sp|Q9QZR0|RNF25_MOUSE E3 ubiquitin-protein ligase RNF25 OS=Mus musculus GN=Rnf25 PE=1
SV=2
Length = 456
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 11 EIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEK 70
E+E LE+I +DE + + G S +TL P E +S V L+ +
Sbjct: 19 EVEVLESIYLDELQVM----KGNGRSPWEIFITLHPATAEVQDSQF--VCFTLVLRIPVQ 72
Query: 71 YPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWLSE 124
YP E P +++++ RG+ + + + L A E LG AM+Y L+ KE L++
Sbjct: 73 YPHEVPQISIRNPRGLSDEQIHKISQALGHVAKEGLGTAMLYELIEKGKEILTD 126
>sp|Q9QZ05|E2AK4_MOUSE Eukaryotic translation initiation factor 2-alpha kinase 4 OS=Mus
musculus GN=Eif2ak4 PE=1 SV=2
Length = 1648
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 6 QEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIF 65
Q Q+ E++ALEAI +F+++ G + L PQ +E V++ L
Sbjct: 21 QRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLYPQGLAGEEVY---VQVELQV 77
Query: 66 SHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWLSE 124
YPD P + +K+ +G+ + +LK LE+ A + G MI+ L + +LSE
Sbjct: 78 KCPPTYPDVVPEIELKNAKGLSNESVNLLKSHLEELAKKQCGEVMIFELAHHVQSFLSE 136
>sp|Q5E9N3|RNF25_BOVIN E3 ubiquitin-protein ligase RNF25 OS=Bos taurus GN=RNF25 PE=2 SV=1
Length = 458
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 11 EIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEK 70
E+E LE+I +DE + + +G ++ + + +TL P E +S V L+ +
Sbjct: 19 EVEVLESIYLDELQVVKG--NGRSSPWEIY-ITLHPATAEDQDSQY--VCFTLVLQVPTQ 73
Query: 71 YPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWLSE 124
YP E P +++++ RG+ + + + L A LG AM+Y L+ KE L++
Sbjct: 74 YPHEVPQISIRNPRGLSDEQIHKISQALSHVAEAGLGTAMLYELIEKGKEILTD 127
>sp|Q96BH1|RNF25_HUMAN E3 ubiquitin-protein ligase RNF25 OS=Homo sapiens GN=RNF25 PE=1
SV=1
Length = 459
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 11 EIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEK 70
E+E LE+I +DE + I + TS +TL P E +S V L+ +
Sbjct: 19 EVEVLESIYLDELQVI---KGNGRTSPWEIYITLHPATAEDQDSQY--VCFTLVLQVPAE 73
Query: 71 YPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWLSE 124
YP E P +++++ RG+ + + + L A LG AM+Y L+ KE L++
Sbjct: 74 YPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGLGTAMLYELIEKGKEILTD 127
>sp|P15442|GCN2_YEAST Serine/threonine-protein kinase GCN2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GCN2 PE=1 SV=3
Length = 1659
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 11 EIEALEAILMDEFKEIHSGESGLNTSNQ-CFQVTLSPQDDEADESTMPPVELALIFSHTE 69
E+EA+ +I MD+F ++ +S + Q F++TL D E ES+ + L F+ T
Sbjct: 18 ELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDKEPVESS-----ITLHFAMTP 72
Query: 70 KYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWLSE 124
YP P + K+++ + L++LK + ++ + + G +I+ + + +E L E
Sbjct: 73 MYPYTAPEIEFKNVQNVMDSQLQMLKSEFKKIHNTSRGQEIIFEITSFTQEKLDE 127
>sp|O94721|YCF9_SCHPO RWD domain-containing protein C1393.09c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1393.09c PE=4
SV=1
Length = 215
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 21/125 (16%)
Query: 1 MTDHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVE 60
MT ++E E E LE+I +EFK I+ + F++T P D E PP
Sbjct: 1 MTSAIEE---EREILESIYPEEFKCIN---------DSTFEIT-QPIDREESNCDNPP-- 45
Query: 61 LALIFSH--TEKYPDEPPLLNV---KSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLV 115
+LIF+ +E YPDE P + + + + +++ LK+ + Q A E LGMAMI++L
Sbjct: 46 -SLIFTCQLSEAYPDEVPDVKITFSEPHPWLGEEEIERLKQVVAQNAEECLGMAMIFSLC 104
Query: 116 TSAKE 120
+ AKE
Sbjct: 105 SVAKE 109
>sp|Q75JN1|IFKC_DICDI Probable serine/threonine-protein kinase ifkC OS=Dictyostelium
discoideum GN=ifkC PE=3 SV=1
Length = 1700
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 18/131 (13%)
Query: 7 EQEMEIEALEAILMDEF---------KEIHSGESGLNTSNQC--FQVTLSPQ--DDEADE 53
+Q+ME+EAL+AI DEF + + + G+ + F++T+ P DDE
Sbjct: 71 QQDMELEALQAIFNDEFITMDPIIINRNMDTIIEGIKPIRESARFRITIKPYVGDDEK-- 128
Query: 54 STMPPVELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYT 113
V + L+ EKYP P + V +G+ L+EKL +E+ +G MI+
Sbjct: 129 ---CFVSIYLVVGFPEKYPVVLPSIQVLVNKGLPQKKAIELEEKLIRESQGKIGNIMIFD 185
Query: 114 LVTSAKEWLSE 124
L AK++L+E
Sbjct: 186 LCEIAKDFLNE 196
>sp|Q6NW29|RWDD4_HUMAN RWD domain-containing protein 4 OS=Homo sapiens GN=RWDD4 PE=1 SV=3
Length = 188
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 21/119 (17%)
Query: 6 QEQEMEIEALEAILM--DEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELAL 63
++QEME+EAL +I + F+E+ S FQ + D P +
Sbjct: 5 EDQEMELEALRSIYEGDESFREL---------SPVSFQYRIGENGD--------PKAFLI 47
Query: 64 IFSHTEKYPDEPPLLNVKSL--RGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKE 120
S TE YP PP+L++ + I + + + KL++ NLG AM YTL AK+
Sbjct: 48 EISWTETYPQTPPILSMNAFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTLFEYAKD 106
>sp|Q569B7|RWDD4_RAT RWD domain-containing protein 4 OS=Rattus norvegicus GN=Rwdd4 PE=2
SV=1
Length = 188
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 21/119 (17%)
Query: 6 QEQEMEIEALEAILM--DEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELAL 63
++QEME+EAL +I + F+E+ S FQ + D P +
Sbjct: 5 EDQEMELEALRSIYEGDESFREL---------SPVSFQYRIGEDGD--------PKAFLI 47
Query: 64 IFSHTEKYPDEPPLLNVKSL--RGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKE 120
S TE YP PP++++ + I + + + KL++ NLG AM YTL AK+
Sbjct: 48 EISWTETYPQTPPVISMNAFFNNTISSAVKQSILAKLQEAVEVNLGTAMTYTLFEYAKD 106
>sp|Q9W625|IMPCT_XENLA Protein IMPACT OS=Xenopus laevis GN=impact PE=2 SV=1
Length = 312
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 19/126 (15%)
Query: 3 DHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELA 62
++VQ Q E+EAL +I DE+ I E + F +T+S D S P L
Sbjct: 7 ENVQRQIDEVEALTSIYGDEWCVIDEAE-------RIFCITIS------DSSNKPTWTLC 53
Query: 63 LIFSHTEKYP-DEPPL--LNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAK 119
L YP PPL LN LRG D L LE+ +NLG ++Y V +
Sbjct: 54 LQVILPPDYPVASPPLYQLNAPWLRG---EDRLTLSNCLEEMYLQNLGENILYQWVEKIR 110
Query: 120 EWLSER 125
E+L E+
Sbjct: 111 EFLVEK 116
>sp|Q9CPR1|RWDD4_MOUSE RWD domain-containing protein 4 OS=Mus musculus GN=Rwdd4 PE=2 SV=1
Length = 188
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 21/119 (17%)
Query: 6 QEQEMEIEALEAILM--DEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELAL 63
++QEME+EAL +I + F+E+ S FQ + D P +
Sbjct: 5 EDQEMELEALRSIYEGDNSFREL---------SPVSFQYRIGEDGD--------PKAFLI 47
Query: 64 IFSHTEKYPDEPPLLNVKSL--RGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKE 120
S TE YP P++++ + I + + + KL++ NLG AM YTL AK+
Sbjct: 48 EVSWTETYPQTAPVISMNAFFNNTISSAVKQSILAKLQEAVEVNLGTAMTYTLFEYAKD 106
>sp|Q5M8G6|IMPTA_XENTR Protein IMPACT-A OS=Xenopus tropicalis GN=impact-A PE=2 SV=1
Length = 318
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 19/123 (15%)
Query: 3 DHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELA 62
+++Q Q E+EAL +I DE+ I E + F +T+S D S P L
Sbjct: 7 ENLQSQIDEVEALTSIYGDEWCVIDEAE-------RIFCITVS------DSSNKPTWTLC 53
Query: 63 LIFSHTEKYP-DEPPL--LNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAK 119
L +YP PPL LN LRG D L LE+ +NLG ++Y V +
Sbjct: 54 LQVILPAEYPASSPPLYQLNAPWLRG---EDRLTLANNLEEIYLQNLGENILYQWVEKIR 110
Query: 120 EWL 122
E+L
Sbjct: 111 EFL 113
>sp|Q9LX30|GCN2_ARATH Probable serine/threonine-protein kinase GCN2 OS=Arabidopsis
thaliana GN=GCN2 PE=2 SV=2
Length = 1241
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 11 EIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEK 70
EI AL AI ++ K + S + + + ++ D S M LI
Sbjct: 38 EITALSAIFQEDCKVVSDSRSPPQIAIKLRPYSKDMGYEDTDISAM------LIVRCLPG 91
Query: 71 YPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENL--GMAMIYTLVTSAKEWLSE 124
YP + P L + +G+ D + L LE +A+ N G MI+ LV +A+E+LSE
Sbjct: 92 YPYKCPKLQITPEQGLTTADAEKLLSLLEDQANSNAREGRVMIFNLVEAAQEFLSE 147
>sp|Q03768|GIR2_YEAST Protein GIR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GIR2 PE=1 SV=1
Length = 265
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 3 DHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELA 62
D+ +EQ+ E+E LE+I DE + I+ + F+V + + D D +++ E
Sbjct: 2 DYKEEQKQELEVLESIYPDELRIINDEYPKIK-----FEVAIKLELDTGDSTSVLTKEHT 56
Query: 63 LI--FSHTEKYPDEPPLLNVKS 82
+I F E YPDEP L+++++
Sbjct: 57 IIAEFKLPENYPDEPCLISLEA 78
>sp|A9UMG5|IMPTB_XENTR Protein IMPACT-B OS=Xenopus tropicalis GN=impact-B PE=2 SV=1
Length = 317
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 20/134 (14%)
Query: 3 DHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELA 62
+++Q Q EIEAL +I +E+ I + + + F + +S E+ P +
Sbjct: 10 NNLQSQIEEIEALSSIYGEEWCVI-------DEAARVFCIRIS-------ETQQPKWTVC 55
Query: 63 LIFSHTEKYPDE-PPL--LNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAK 119
L YP PP+ +N LRG D L LE+ EN G +++Y V +
Sbjct: 56 LQIILPPDYPSSAPPIYQINAAWLRG---QDRMTLSNSLEEIYVENAGESILYLWVEKIR 112
Query: 120 EWLSERYSQDAGID 133
E+L+E+ G D
Sbjct: 113 EFLTEKSQHSDGPD 126
>sp|Q642J4|IMPCT_DANRE Protein IMPACT OS=Danio rerio GN=impact PE=2 SV=1
Length = 317
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 20/134 (14%)
Query: 3 DHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELA 62
+++Q Q EIEAL +I +E+ I + + + F + +S E+ P +
Sbjct: 10 NNLQSQIEEIEALSSIYGEEWCVI-------DEAARVFCIRIS-------ETQQPKWTVC 55
Query: 63 LIFSHTEKYPDE-PPL--LNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAK 119
L YP PP+ +N LRG D L LE+ EN G +++Y V +
Sbjct: 56 LQIILPPDYPSSAPPIYQINAAWLRG---QDRMTLSNSLEEIYVENAGESILYLWVEKIR 112
Query: 120 EWLSERYSQDAGID 133
E+L+E+ G D
Sbjct: 113 EFLTEKSQHSDGPD 126
>sp|A5D510|ASSY_PELTS Argininosuccinate synthase OS=Pelotomaculum thermopropionicum
(strain DSM 13744 / JCM 10971 / SI) GN=argG PE=3 SV=1
Length = 401
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 49 DEADESTMPPVELALIFSHTEKYPDEPPLLNVKSLRGI------QAGDLKILKEKLEQEA 102
D D PP ++ L+ + EK PD+P + ++ RG+ +A D L E+L + A
Sbjct: 188 DLEDPGNEPPSDVLLLITPPEKAPDKPAYVKIEFERGVPVKLDGEALDPVTLIERLNKIA 247
Query: 103 SEN-LGMA 109
EN +G+A
Sbjct: 248 GENGVGIA 255
>sp|Q9VTF9|UFD1_DROME Ubiquitin fusion degradation protein 1 homolog OS=Drosophila
melanogaster GN=Ufd1-like PE=2 SV=1
Length = 316
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 38 QCFQVTLSPQDDEAD-----ESTMPPVELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLK 92
+CF V++ P ++ D + MPP L + +YP L NVK R AG L+
Sbjct: 22 KCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNVKKSRSSHAGVLE 81
Query: 93 ILKE 96
+ +
Sbjct: 82 FVAD 85
>sp|Q9P2X3|IMPCT_HUMAN Protein IMPACT OS=Homo sapiens GN=IMPACT PE=1 SV=2
Length = 320
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 19/123 (15%)
Query: 6 QEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIF 65
Q Q EIEA+ AI +E+ I + C ++ D+ D+ P L L
Sbjct: 10 QRQNEEIEAMAAIYGEEWCVI----------DDCAKIFCIRISDDIDD---PKWTLCLQV 56
Query: 66 SHTEKYPD-EPPL--LNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWL 122
+YP PP+ LN L+G + DL LE+ +N+G +++Y V ++ L
Sbjct: 57 MLPNEYPGTAPPIYQLNAPWLKGQERADLS---NSLEEIYIQNIGESILYLWVEKIRDVL 113
Query: 123 SER 125
++
Sbjct: 114 IQK 116
>sp|A7YY45|IMPCT_BOVIN Protein IMPACT OS=Bos taurus GN=IMPACT PE=2 SV=2
Length = 318
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 19/123 (15%)
Query: 6 QEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIF 65
Q Q EIEA+ AI +E+ I + C ++ D+ D+ P L L
Sbjct: 10 QRQNEEIEAMAAIYGEEWCVI----------DDCAKIFCIRISDDIDD---PKWTLCLQV 56
Query: 66 SHTEKYPD-EPPL--LNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWL 122
+YP PP+ LN L+G + DL LE+ +N+G +++Y V ++ L
Sbjct: 57 MLPNEYPGTAPPIYQLNAPWLKGQERADLS---NSLEEIYIQNIGESILYLWVEKIRDVL 113
Query: 123 SER 125
++
Sbjct: 114 IQK 116
>sp|Q5GFD8|IMPCT_RABIT Protein IMPACT OS=Oryctolagus cuniculus GN=IMPACT PE=2 SV=1
Length = 317
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 19/123 (15%)
Query: 6 QEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIF 65
Q Q EIEA+ AI +E+ I + C ++ D+ D+ P L L
Sbjct: 10 QRQNEEIEAMAAIYGEEWCVI----------DDCAKIFCIRISDDIDD---PKWTLCLQV 56
Query: 66 SHTEKYPD-EPPL--LNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWL 122
+YP PP+ LN L+G + DL LE+ +N+G +++Y V ++ L
Sbjct: 57 MLPNEYPGTAPPIYQLNAPWLKGQERADLS---NSLEEIYIQNIGESILYLWVEKIRDVL 113
Query: 123 SER 125
E+
Sbjct: 114 IEK 116
>sp|Q8BLG0|PHF20_MOUSE PHD finger protein 20 OS=Mus musculus GN=Phf20 PE=1 SV=2
Length = 1010
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 121 WLSERYSQDAGIDNTGEEELEKDEVVFFFTVLCL 154
W E Y QD + +EELE D+ F V C+
Sbjct: 626 WSDEEYGQDVDVTTNPDEELEGDDRYDFEVVRCI 659
>sp|B0JFQ9|HIS5_MICAN Imidazole glycerol phosphate synthase subunit HisH OS=Microcystis
aeruginosa (strain NIES-843) GN=hisH PE=3 SV=1
Length = 212
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 15 LEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQD-DEADESTMP------PVELALIFSH 67
L A++ + +HS GL T ++T SP D ++AD +P P + H
Sbjct: 3 LIAVIDYDMGNLHSACKGLETVGAVPKITDSPLDLEKADAIVLPGVGSFDPAVRQIRSRH 62
Query: 68 TEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGM 108
EK P + + N K GI G L+IL E E+ LG+
Sbjct: 63 LEK-PIKAAIANGKPFLGICLG-LQILFETSEEGQEAGLGI 101
>sp|Q28C74|LPPRC_XENTR Leucine-rich PPR motif-containing protein, mitochondrial OS=Xenopus
tropicalis GN=lrpprc PE=2 SV=1
Length = 1391
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 35 TSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKIL 94
TSN C SP E P + +F+ ++KY P L +V R ++ GD +L
Sbjct: 815 TSNLC-----SPLVSVHLEKGDLPAAMETLFTCSKKYNCMPRLHDVLC-RLVEKGDTDLL 868
Query: 95 KEKLEQEASENLGMAMIYTLV 115
++ ++ + E MAM+Y L+
Sbjct: 869 QKAMDHISQERGEMAMLYDLL 889
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,019,176
Number of Sequences: 539616
Number of extensions: 2213318
Number of successful extensions: 5077
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 4979
Number of HSP's gapped (non-prelim): 113
length of query: 157
length of database: 191,569,459
effective HSP length: 108
effective length of query: 49
effective length of database: 133,290,931
effective search space: 6531255619
effective search space used: 6531255619
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)