Query 031565
Match_columns 157
No_of_seqs 148 out of 860
Neff 7.3
Searched_HMMs 29240
Date Tue Mar 26 01:48:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031565.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031565hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yz0_A Serine/threonine-protei 100.0 4E-31 1.4E-35 193.1 14.1 126 1-131 8-134 (138)
2 2ebm_A RWD domain-containing p 100.0 4.6E-31 1.6E-35 190.4 13.6 119 1-130 8-126 (128)
3 1ukx_A GCN2, GCN2 EIF2alpha ki 100.0 9.7E-31 3.3E-35 190.6 15.2 127 1-131 8-135 (137)
4 2ebk_A RWD domain-containing p 100.0 4.9E-28 1.7E-32 174.7 12.6 119 2-130 6-126 (128)
5 2day_A Ring finger protein 25; 100.0 5.1E-28 1.7E-32 174.4 12.3 119 3-126 8-126 (128)
6 2dax_A Protein C21ORF6; RWD do 99.9 1.1E-25 3.6E-30 167.1 14.0 124 1-130 6-144 (152)
7 2daw_A RWD domain containing p 99.9 1.7E-24 5.8E-29 161.2 11.7 120 2-130 13-146 (154)
8 2a7l_A Hypothetical ubiquitin- 96.8 0.0071 2.4E-07 43.3 8.4 75 1-83 20-95 (136)
9 2fo3_A Ubiquitin-conjugating e 96.4 0.021 7.2E-07 40.0 8.4 74 1-83 4-77 (125)
10 2h2y_A Ubiquitin-conjugating e 96.3 0.045 1.5E-06 38.9 9.6 72 3-83 20-91 (136)
11 2aak_A UBC1, ubiquitin conjuga 96.1 0.034 1.1E-06 40.2 8.4 74 1-83 1-75 (152)
12 2bep_A Ubiquitin-conjugating e 96.0 0.064 2.2E-06 39.0 9.4 71 4-83 9-82 (159)
13 1ayz_A UBC2, ubiquitin-conjuga 95.9 0.04 1.4E-06 40.7 8.3 73 1-82 1-74 (169)
14 1wzv_A Ubiquitin-conjugating e 95.9 0.042 1.4E-06 39.8 8.3 71 4-83 5-75 (155)
15 1zdn_A Ubiquitin-conjugating e 95.9 0.069 2.4E-06 38.8 9.3 70 5-83 15-84 (158)
16 2ayv_A Ubiquitin-conjugating e 95.8 0.08 2.7E-06 38.9 9.5 70 5-83 23-92 (166)
17 2e2c_A Ubiquitin conjugating e 95.8 0.091 3.1E-06 38.1 9.6 71 4-83 10-80 (156)
18 2c2v_B Ubiquitin-conjugating e 95.8 0.073 2.5E-06 38.6 9.0 70 5-83 7-76 (154)
19 1yrv_A Ubiquitin-conjugating l 95.7 0.075 2.6E-06 39.2 8.8 70 5-83 25-94 (169)
20 2ucz_A UBC7, ubiquitin conjuga 95.5 0.1 3.4E-06 38.2 9.1 72 4-83 5-76 (165)
21 3rz3_A Ubiquitin-conjugating e 95.5 0.13 4.3E-06 38.4 9.7 72 4-83 8-79 (183)
22 1jat_A Ubiquitin-conjugating e 95.5 0.067 2.3E-06 38.7 8.0 70 5-83 7-76 (155)
23 2c4o_A Ubiquitin-conjugating e 95.5 0.11 3.7E-06 38.2 9.1 70 5-83 21-90 (165)
24 3bzh_A Ubiquitin-conjugating e 95.4 0.066 2.3E-06 40.4 7.9 70 5-83 50-119 (194)
25 1yh2_A HSPC150 protein similar 95.4 0.091 3.1E-06 38.7 8.5 70 5-83 6-75 (169)
26 1z2u_A Ubiquitin-conjugating e 95.4 0.084 2.9E-06 38.0 8.2 70 5-83 6-75 (150)
27 4gpr_A Ubiquitin-conjugating e 95.4 0.14 4.8E-06 36.8 9.2 70 5-83 6-75 (151)
28 2r0j_A Ubiquitin carrier prote 95.3 0.089 3E-06 37.8 7.9 69 6-83 4-72 (149)
29 3h8k_A Ubiquitin-conjugating e 95.2 0.17 5.9E-06 36.8 9.4 71 5-83 5-75 (164)
30 3fn1_B NEDD8-conjugating enzym 95.2 0.099 3.4E-06 38.3 8.1 71 4-83 15-85 (167)
31 2pwq_A Ubiquitin conjugating e 95.1 0.16 5.6E-06 38.9 9.3 70 5-83 25-94 (216)
32 1fxt_A Ubiquitin-conjugating e 95.0 0.19 6.6E-06 36.0 9.0 71 5-83 3-73 (149)
33 2awf_A Ubiquitin-conjugating e 94.9 0.26 9E-06 36.3 9.7 71 5-83 19-89 (172)
34 3k9o_A Ubiquitin-conjugating e 94.8 0.19 6.5E-06 37.9 9.0 70 4-82 6-78 (201)
35 2y9m_A Ubiquitin-conjugating e 94.8 0.19 6.6E-06 37.0 8.8 71 4-82 7-88 (172)
36 1c4z_D UBCH7, ubiquitin conjug 94.8 0.03 1E-06 40.5 4.3 68 7-83 6-73 (154)
37 2grr_A Ubiquitin-conjugating e 94.8 0.14 4.9E-06 37.3 7.8 76 4-83 8-83 (161)
38 2z5d_A Ubiquitin-conjugating e 94.7 0.12 4E-06 38.6 7.3 66 5-83 27-92 (179)
39 2gjd_A Ubiquitin-conjugating e 94.7 0.15 5.2E-06 36.9 7.8 78 1-83 1-80 (157)
40 4ds2_A Ubiquitin-conjugating e 94.7 0.13 4.4E-06 37.7 7.4 42 38-83 50-93 (167)
41 3o2u_A NEDD8-conjugating enzym 94.6 0.081 2.8E-06 39.8 6.4 40 39-83 65-104 (190)
42 1y8x_A Ubiquitin-conjugating e 94.6 0.06 2.1E-06 39.3 5.4 69 4-83 7-75 (160)
43 1i7k_A Ubiquitin-conjugating e 94.4 0.18 6.3E-06 37.5 7.9 71 4-83 31-101 (179)
44 2f4w_A Ubiquitin-conjugating e 94.3 0.23 8E-06 37.1 8.2 70 5-83 16-85 (187)
45 2a4d_A Ubiquitin-conjugating e 93.9 0.35 1.2E-05 35.3 8.4 71 5-83 27-100 (160)
46 2f4z_A Tgtwinscan_2721 - E2 do 93.8 0.28 9.5E-06 36.9 7.9 25 59-83 92-116 (193)
47 3rcz_B SUMO-conjugating enzyme 93.6 0.35 1.2E-05 35.3 7.9 74 5-83 12-86 (163)
48 1jat_B Ubiquitin-conjugating e 93.6 0.14 4.9E-06 36.3 5.7 73 5-83 8-81 (138)
49 3kpa_A Probable ubiquitin fold 93.6 0.054 1.8E-06 39.6 3.3 25 59-83 85-109 (168)
50 2onu_A Ubiquitin-conjugating e 93.6 0.14 4.9E-06 37.0 5.6 42 38-83 29-70 (152)
51 2z6o_A UFM1-conjugating enzyme 93.5 0.055 1.9E-06 40.2 3.3 24 59-82 83-106 (172)
52 2q0v_A Ubiquitin-conjugating e 93.5 0.15 5.1E-06 37.1 5.7 73 5-83 23-96 (156)
53 3e46_A Ubiquitin-conjugating e 93.4 0.49 1.7E-05 37.1 8.8 69 5-82 59-130 (253)
54 1zuo_A Hypothetical protein LO 92.9 0.068 2.3E-06 40.1 3.1 24 60-83 90-113 (186)
55 1yf9_A Ubiquitin carrier prote 92.4 0.26 9E-06 36.3 5.7 66 5-83 14-79 (171)
56 1tte_A Ubiquitin-conjugating e 92.3 0.23 7.9E-06 38.0 5.5 69 5-82 4-73 (215)
57 4ddg_A Ubiquitin-conjugating e 92.1 0.72 2.5E-05 38.3 8.7 70 5-83 5-74 (399)
58 2nvu_C NEDD8-conjugating enzym 91.7 0.11 3.9E-06 38.6 3.0 68 5-83 28-95 (180)
59 2hlw_A Ubiquitin-conjugating e 90.5 0.27 9.1E-06 36.3 4.0 71 5-83 37-110 (170)
60 3ceg_A Baculoviral IAP repeat- 89.4 0.57 1.9E-05 38.1 5.5 69 5-83 78-151 (323)
61 3r3q_A Suppressor protein STP2 83.5 0.83 2.8E-05 33.5 3.1 24 59-82 81-104 (162)
62 2x4k_A 4-oxalocrotonate tautom 82.4 1.9 6.5E-05 25.1 4.0 35 75-109 3-37 (63)
63 3abf_A 4-oxalocrotonate tautom 82.3 1.9 6.4E-05 25.5 4.0 35 75-109 1-35 (64)
64 3obq_A Tumor susceptibility ge 82.3 1 3.5E-05 32.5 3.1 24 59-82 69-92 (146)
65 3m20_A 4-oxalocrotonate tautom 81.6 2 6.7E-05 25.7 3.9 33 76-109 1-33 (62)
66 2opa_A Probable tautomerase YW 80.4 2.1 7.1E-05 25.0 3.7 34 76-109 1-34 (61)
67 1otf_A 4-oxalocrotonate tautom 79.9 2.2 7.5E-05 24.9 3.6 34 76-109 1-34 (62)
68 3mb2_A 4-oxalocrotonate tautom 78.5 2.1 7.3E-05 26.3 3.4 35 75-109 1-35 (72)
69 3ry0_A Putative tautomerase; o 78.2 2.6 8.9E-05 25.2 3.7 34 76-109 1-34 (65)
70 3m21_A Probable tautomerase HP 75.4 3.4 0.00012 24.9 3.6 34 76-109 1-37 (67)
71 3ej9_A Alpha-subunit of trans- 74.3 3.6 0.00012 25.7 3.7 35 75-109 1-35 (76)
72 3qc5_X Platelet binding protei 69.8 10 0.00035 31.0 6.1 40 59-100 270-309 (360)
73 3zqs_A E3 ubiquitin-protein li 68.1 34 0.0012 25.4 9.2 37 38-83 26-62 (186)
74 3ej9_B Beta-subunit of trans-3 61.8 10 0.00035 23.7 3.7 34 76-109 1-34 (70)
75 1gyx_A YDCE, B1461, hypothetic 58.9 13 0.00045 22.8 3.9 34 76-109 1-35 (76)
76 3mlc_A FG41 malonate semialdeh 54.4 23 0.00079 24.5 5.0 44 65-109 50-98 (136)
77 2aal_A Malonate semialdehyde d 52.9 14 0.00049 25.1 3.7 35 75-109 1-35 (131)
78 1p3q_Q VPS9P, vacuolar protein 42.0 19 0.00066 21.3 2.5 17 5-21 9-25 (54)
79 3mlc_A FG41 malonate semialdeh 40.7 23 0.00078 24.5 3.2 34 76-109 1-34 (136)
80 3fcs_B Integrin beta-3; beta p 38.1 26 0.00087 31.2 3.7 28 37-73 85-112 (690)
81 3t5s_A Gilaa.00834.A, macropha 37.9 41 0.0014 23.2 4.1 38 73-110 20-57 (135)
82 3c6v_A Probable tautomerase/de 37.3 45 0.0016 23.8 4.4 34 75-109 22-56 (161)
83 2wkb_A Macrophage migration in 37.2 39 0.0013 22.6 3.9 36 76-111 1-36 (125)
84 1mww_A Hypothetical protein HI 36.1 60 0.002 21.6 4.7 35 75-109 59-93 (128)
85 1hfo_A Migration inhibitory fa 34.3 54 0.0018 21.3 4.2 37 72-108 53-89 (113)
86 2xcz_A Possible ATLS1-like lig 32.8 37 0.0013 22.2 3.1 37 75-112 1-37 (115)
87 2wkb_A Macrophage migration in 32.1 36 0.0012 22.8 3.0 38 72-109 54-91 (125)
88 3k6s_B Integrin beta-2; cell r 31.5 27 0.00094 31.0 2.8 51 37-98 78-128 (687)
89 1uiz_A MIF, macrophage migrati 31.4 65 0.0022 20.9 4.2 36 73-108 55-90 (115)
90 3fwu_A Macrophage migration in 31.2 74 0.0025 21.7 4.6 37 75-111 21-57 (133)
91 2aal_A Malonate semialdehyde d 30.8 92 0.0031 20.8 5.0 32 76-108 67-98 (131)
92 3b64_A Macrophage migration in 30.7 73 0.0025 20.6 4.3 35 76-111 1-36 (112)
93 3t3p_B Integrin beta-3; integr 30.2 74 0.0025 27.0 5.2 57 37-104 85-141 (472)
94 3v4v_B Integrin beta-7; cell a 28.3 86 0.0029 26.8 5.2 57 37-104 106-162 (503)
95 2xcz_A Possible ATLS1-like lig 27.8 65 0.0022 21.0 3.7 36 73-108 55-90 (115)
96 1ghh_A DINI, DNA-damage-induci 27.3 74 0.0025 20.3 3.6 20 85-104 54-73 (81)
97 3vi3_B Integrin beta-1; beta p 27.0 1E+02 0.0036 25.9 5.5 57 37-104 96-152 (454)
98 3fwt_A Macrophage migration in 26.1 67 0.0023 21.9 3.6 35 75-109 21-55 (133)
99 3b64_A Macrophage migration in 24.8 85 0.0029 20.3 3.8 36 73-108 55-90 (112)
100 4dh4_A MIF; trimer, isomerase; 24.4 89 0.0031 20.3 3.9 35 76-110 1-35 (114)
101 2os5_A Acemif; macrophage migr 23.6 85 0.0029 20.6 3.7 34 75-108 57-90 (119)
102 1abz_A Alpha-T-alpha, ATA; de 21.7 68 0.0023 17.1 2.2 15 5-19 5-19 (40)
103 2kw7_A Conserved domain protei 21.2 1.6E+02 0.0056 20.3 4.9 42 84-125 26-75 (157)
No 1
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=99.97 E-value=4e-31 Score=193.14 Aligned_cols=126 Identities=23% Similarity=0.387 Sum_probs=110.8
Q ss_pred CCCcHHHHHHHHHHHHhhcCCceeecccCccCCCC-CCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcce
Q 031565 1 MTDHVQEQEMEIEALEAILMDEFKEIHSGESGLNT-SNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLN 79 (157)
Q Consensus 1 m~~~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~-~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~ 79 (157)
||+++++|++|++||+|||+|+|+.+++..++|+. .+..|+|+|++..+. ...+.+.|+|++|++||+++|.|.
T Consensus 8 ~~~~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~~-----~~~~~~~L~~~~p~~YP~~~P~i~ 82 (138)
T 2yz0_A 8 LDQYYEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDKE-----PVESSITLHFAMTPMYPYTAPEIE 82 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSCS-----SCCCEEEEEEECCSSTTSSCCEEE
T ss_pred ccchHHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCCC-----CCceEEEEEEECCCCCCCCCCeEE
Confidence 67899999999999999999999988876567763 367999999986432 235799999999999999999999
Q ss_pred EeccCCCCHHhHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHhcCCCC
Q 031565 80 VKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWLSERYSQDAG 131 (157)
Q Consensus 80 l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~mIf~lie~~qe~L~~~~~~~~~ 131 (157)
+.+.+||++.++..|++.|.+.|+++.|++|||+|++|+||+|.++.....|
T Consensus 83 l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~mif~lv~~lqe~l~~~q~~~~~ 134 (138)
T 2yz0_A 83 FKNVQNVMDSQLQMLKSEFKKIHNTSRGQEIIFEITSFTQEKLDEFQNVVNT 134 (138)
T ss_dssp EECCCSCCSHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHSCCC
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHhCCCEEHHHHHHHHHHHHHHHHHhhhc
Confidence 9988999999999999999999999999999999999999999999544444
No 2
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.97 E-value=4.6e-31 Score=190.44 Aligned_cols=119 Identities=39% Similarity=0.541 Sum_probs=106.8
Q ss_pred CCCcHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceE
Q 031565 1 MTDHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNV 80 (157)
Q Consensus 1 m~~~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l 80 (157)
||++.++|++|++||+|||+|+|+++++ .+..|+|++++..++. ...+++.|+|++|++||+++|.|.+
T Consensus 8 m~~~~e~q~~EleaL~sIy~d~~~~~~~-------~~~~~~i~i~~~~~~~----~~~~~~~L~v~~p~~YP~~~P~i~l 76 (128)
T 2ebm_A 8 MTDYGEEQRNELEALESIYPDSFTVLSE-------NPPSFTITVTSEAGEN----DETVQTTLKFTYSEKYPDEAPLYEI 76 (128)
T ss_dssp CCCHHHHHHHHHHHHHHHCSSSEEECCS-------SSCEEEECCBCCCCTT----SCCCBEEEEEECCSSTTTSCCEEEE
T ss_pred CCChHHHHHHHHHHHHHHccCceEEccC-------CCCEEEEEEecCCCCC----cCceeEEEEEEeCCCCCCCCceEEE
Confidence 8899999999999999999999988765 2479999998765331 2357899999999999999999999
Q ss_pred eccCCCCHHhHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHhcCCC
Q 031565 81 KSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWLSERYSQDA 130 (157)
Q Consensus 81 ~~~~~L~~~~~~~L~~~L~~~~~e~~G~~mIf~lie~~qe~L~~~~~~~~ 130 (157)
.+.+||++.++..|.+.|.+.|+++.|++|||+|++|+|++|.+++++++
T Consensus 77 ~~~~~l~~~~~~~L~~~L~~~~~e~~G~~mif~lv~~lqe~l~e~~~~~~ 126 (128)
T 2ebm_A 77 FSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQEKLNEIVDQIK 126 (128)
T ss_dssp EEESSCCHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHGG
T ss_pred EcCCCCCHHHHHHHHHHHHHHHHHhCCCEEHHHHHHHHHHHHHHHHHHHh
Confidence 98889999999999999999999999999999999999999999987653
No 3
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=99.97 E-value=9.7e-31 Score=190.62 Aligned_cols=127 Identities=26% Similarity=0.408 Sum_probs=109.4
Q ss_pred CCCcHHHHHHHHHHHHhhcCCceeecccCccCCC-CCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcce
Q 031565 1 MTDHVQEQEMEIEALEAILMDEFKEIHSGESGLN-TSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLN 79 (157)
Q Consensus 1 m~~~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~-~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~ 79 (157)
||++.|+|++|++||+|||+|+|+.+++. ++|. +.+..|+|++++.+.++ ....+.+.|.|+||++||+++|.|.
T Consensus 8 ~~~~~e~q~~EleaL~SIY~d~~~~~~~~-~~~~~~~~~~~~i~l~~~~~~~---~~~~~~~~L~v~~p~~YP~~~P~i~ 83 (137)
T 1ukx_A 8 MESYSQRQDHELQALEAIYGSDFQDLRPD-ARGRVREPPEINLVLYPQGLAG---EEVYVQVELRVKCPPTYPDVVPEID 83 (137)
T ss_dssp CCCHHHHHHHHHHHHHHHTSSSEEECCCC-CSSSCCCCCCEEEEECCTTSCS---SSCSCEEEEEECCCTTTTSSCCCCE
T ss_pred CcchHHHHHHHHHHHHHHCcccceeccCc-ccCccCCCcEEEEEEecCCcCC---cccceEEEEEEECCCCCCCCCCcEE
Confidence 78999999999999999999999887754 3443 23689999998754221 1235789999999999999999999
Q ss_pred EeccCCCCHHhHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHhcCCCC
Q 031565 80 VKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWLSERYSQDAG 131 (157)
Q Consensus 80 l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~mIf~lie~~qe~L~~~~~~~~~ 131 (157)
+.+.+||++.++..|++.|.++|+++.|++|||+|++|+||+|.+++..+.|
T Consensus 84 l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~mif~lv~~lqe~l~~~~~p~~~ 135 (137)
T 1ukx_A 84 LKNAKGLSNESVNLLKSHLEELAKKQCGEVMIFELAHHVQSFLSEHNKSGPS 135 (137)
T ss_dssp EEEEESSSSSHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHCCCCCC
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHhCCCEEhHHHHHHHHHHHHhcCCCCCC
Confidence 9888899999999999999999999999999999999999999999865544
No 4
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.95 E-value=4.9e-28 Score=174.74 Aligned_cols=119 Identities=22% Similarity=0.293 Sum_probs=103.0
Q ss_pred CCcHHHHHHHHHHHHhhcCC--ceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcce
Q 031565 2 TDHVQEQEMEIEALEAILMD--EFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLN 79 (157)
Q Consensus 2 ~~~~e~q~eEleAL~SIY~d--~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~ 79 (157)
.++.|+|.+|++||+|||++ +|+.++.+. ..+..|+|++++.... ...+++.|+|++|++||+++|.|.
T Consensus 6 ~~~~e~q~~EleaL~SIy~d~~e~~~~~~~~----~~~~~f~i~l~~~~~~-----~~~~~~~L~~~~p~~YP~~~P~i~ 76 (128)
T 2ebk_A 6 SGMAEPVQEELSVLAAIFCRPHEWEVLSRSE----TDGTVFRIHTKAEGFM-----DADIPLELVFHLPVNYPSCLPGIS 76 (128)
T ss_dssp CCSCHHHHHHHHHHHHHHCCTTTCCCSEECS----SSCEEEEEEEECCTTT-----TCCCEEEEEEEECSSTTSSCCCCC
T ss_pred hhHHHHHHHHHHHHHHHcCCCCceEEecCCC----CCCCeEEEEecCCCCC-----CCCeEEEEEEECCCCCCCCCCeEE
Confidence 45789999999999999998 898776421 1247999999876532 124789999999999999999999
Q ss_pred EeccCCCCHHhHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHhcCCC
Q 031565 80 VKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWLSERYSQDA 130 (157)
Q Consensus 80 l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~mIf~lie~~qe~L~~~~~~~~ 130 (157)
+. .+||++.++..|++.|.+.|++++|++|||+|++|+|+++.+++++|.
T Consensus 77 l~-~~~L~~~~~~~l~~~L~~~~~e~~G~~mif~lv~~lqe~l~~~~~~p~ 126 (128)
T 2ebk_A 77 IN-SEQLTRAQCVTVKEKLLEQAESLLSEPMVHELVLWIQQNLRHILSQPE 126 (128)
T ss_dssp CC-CSSSCHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHTTSHHHHHCCCC
T ss_pred EE-hhhCCHHHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCcC
Confidence 98 489999999999999999999999999999999999999999998874
No 5
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=99.95 E-value=5.1e-28 Score=174.45 Aligned_cols=119 Identities=29% Similarity=0.434 Sum_probs=100.9
Q ss_pred CcHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEec
Q 031565 3 DHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKS 82 (157)
Q Consensus 3 ~~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~ 82 (157)
+..++|++|++||+|||+|+|+.+++... ..+..|+|+|.+..+.+. ....+++.|+|++|++||+++|.|.+.+
T Consensus 8 e~~e~~~~EleaL~SIY~de~~~~~~~~~---~~~~~~~i~l~~~~~~~~--~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 8 EEDWVLPSEVEVLESIYLDELQVIKGNGR---TSPWEIYITLHPATAEDQ--DSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CCCCHHHHHHHHHHHHSTTTEEEECCTTS---SCCEEEEEEECCSCCSSS--SCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred chHHHHHHHHHHHHHHCCCceEEecCCCC---CCCeEEEEEEecCCCCCc--cccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 35678999999999999999988764210 135789999987644321 1346899999999999999999999999
Q ss_pred cCCCCHHhHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHh
Q 031565 83 LRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWLSERY 126 (157)
Q Consensus 83 ~~~L~~~~~~~L~~~L~~~~~e~~G~~mIf~lie~~qe~L~~~~ 126 (157)
.+||++.++..|++.|.+.|+++.|++|||+|++|+|++|.+++
T Consensus 83 ~~~L~~~~~~~L~~~L~~~~~e~~G~~mif~lv~~lqe~l~~~n 126 (128)
T 2day_A 83 PRGLSDEQIHTILQVLGHVAKAGLGTAMLYELIEKGKEILSGPS 126 (128)
T ss_dssp EESSCHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHCCCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCCEEhHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999999999999998654
No 6
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=99.93 E-value=1.1e-25 Score=167.06 Aligned_cols=124 Identities=17% Similarity=0.149 Sum_probs=101.2
Q ss_pred CCCcHHHHHHHHHHHHhhcC--CceeecccC------------ccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEE
Q 031565 1 MTDHVQEQEMEIEALEAILM--DEFKEIHSG------------ESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFS 66 (157)
Q Consensus 1 m~~~~e~q~eEleAL~SIY~--d~~~~~~~~------------~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~ 66 (157)
||++.|+|.+|++||+|||+ |+|+++++. ...|..+...|+|++...... ...+.+.|.|+
T Consensus 6 ~~~~~e~Q~~EleaL~SIY~~~de~~~~~~~~~~~l~~~~~~~~~~~p~~~~~f~I~l~~~~~~-----~~~~~l~L~v~ 80 (152)
T 2dax_A 6 SGEQAEAQLAELDLLASMFPGENELIVNDQLAVAELKDCIEKKTMEGRSSKVYFTINMNLDVSD-----EKMAMFSLACI 80 (152)
T ss_dssp SCHHHHHHHHHHHHHHHHCCSSSSEEESCHHHHHHHHHHHHHTCCCCCCSCEEEEEEEEEECST-----TCEEEEEEEEE
T ss_pred ccchHHHHHHHHHHHHHhCCCCCeEEEcCchhHHHHHHHhhcccccCCCCceEEEEEEecCCCC-----ccCceEEEEEE
Confidence 67899999999999999999 889887641 011110125899998764432 23578999999
Q ss_pred ecCCCCCCCCcceEeccCCCCHHhHHHHHHHHHHHHH-HhCCChhhHHHHHHHHHHHHHHhcCCC
Q 031565 67 HTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEAS-ENLGMAMIYTLVTSAKEWLSERYSQDA 130 (157)
Q Consensus 67 ~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~-e~~G~~mIf~lie~~qe~L~~~~~~~~ 130 (157)
+|++||+++|.|.+.+ .++++.+...|++.|.+.++ +++|++|||+|++|+||++.+++.++.
T Consensus 81 lP~~YP~~~P~i~l~~-~~l~~~~~~~L~~~L~~~~~~~~~G~~mif~lv~~lqe~l~~~~~~~~ 144 (152)
T 2dax_A 81 LPFKYPAVLPEITVRS-VLLSRSQQTQLNTDLTAFLQKHCHGDVCILNATEWVREHASGYVSRDT 144 (152)
T ss_dssp ECSSTTSSCCCCEEEC-TTSCHHHHHHHHHHHHHHHHHSSCSSCCSHHHHHHHHHHHHHHCCCCC
T ss_pred CCCCCCCCCCeEEEEc-ccCCHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999998 46899899999998988875 589999999999999999999987774
No 7
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=99.92 E-value=1.7e-24 Score=161.16 Aligned_cols=120 Identities=16% Similarity=0.139 Sum_probs=98.1
Q ss_pred CCcHHHHHHHHHHHHhhcC--CceeecccCc----------cCCCCCC-ceEEEEecCCCCCCCcCCCCCeEEEEEEEec
Q 031565 2 TDHVQEQEMEIEALEAILM--DEFKEIHSGE----------SGLNTSN-QCFQVTLSPQDDEADESTMPPVELALIFSHT 68 (157)
Q Consensus 2 ~~~~e~q~eEleAL~SIY~--d~~~~~~~~~----------~~~~~~~-~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p 68 (157)
|++.|+|.+|++||+|||+ ++|++.+... ..+..++ ..|+|+++...+ ...+.|+|++|
T Consensus 13 ~~~~e~Q~eElEaL~SIY~~~de~~v~d~~~~~~l~~~~~~~~~~~p~~~~~~i~l~~~~~--------~~~i~L~v~lP 84 (154)
T 2daw_A 13 KESLQLQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQIEEP--------KVKIDLQVTMP 84 (154)
T ss_dssp HHHHHHHHHHHHHHHHHCCSTTSEEESCGGGTHHHHHHHHTSCCSCCCCEEEEEEEEETTT--------TEEEEEEEEEC
T ss_pred hhhHHHHHHHHHHHHHhCCCCCeEEEeccchHHHHHHhhcccccCCCCceEEEEEEecCCC--------CceEEEEEEcC
Confidence 5689999999999999999 8898765321 0111111 478877766432 24799999999
Q ss_pred CCCCCCCCcceEeccCCCCHHhHHHHHHHHHHHHHHh-CCChhhHHHHHHHHHHHHHHhcCCC
Q 031565 69 EKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASEN-LGMAMIYTLVTSAKEWLSERYSQDA 130 (157)
Q Consensus 69 ~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~-~G~~mIf~lie~~qe~L~~~~~~~~ 130 (157)
.+||+++|.|.+.+. ++++.+...|.+.|.+.++++ +|++|||+|++|+||++.+++.++.
T Consensus 85 ~~YP~~~P~i~l~~~-~l~~~~~~~L~~~L~~~l~~~~lG~~mif~lve~lqe~~~~~l~~~~ 146 (154)
T 2daw_A 85 HSYPYLALQLFGRSS-ELDRHQQLLLNKGLTSYIGTFDPGELCVCAAIQWLQDNSASYFLNRK 146 (154)
T ss_dssp SSTTSSCCEEEEECS-SSCHHHHHHHHHHHHHHHTTSCTTSCSHHHHHHHHHHTTHHHHCCCC
T ss_pred CCCCCCCCcEEEEeC-CCCHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhCcC
Confidence 999999999999985 899999999999999999776 6999999999999999999998875
No 8
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=96.81 E-value=0.0071 Score=43.30 Aligned_cols=75 Identities=16% Similarity=0.171 Sum_probs=45.7
Q ss_pred CCCcHHHHHHHHHHHHhhcCCceeec-ccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcce
Q 031565 1 MTDHVQEQEMEIEALEAILMDEFKEI-HSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLN 79 (157)
Q Consensus 1 m~~~~e~q~eEleAL~SIY~d~~~~~-~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~ 79 (157)
|.....+...|+..|+.=-+..+.+. .+.. .+-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.
T Consensus 20 Ms~~~~RL~kEl~~l~~~~~~gi~v~~~~~~----~nl~~W~~~I~GP~~T----pYegG~f~l~i~fp~~YP~~PP~v~ 91 (136)
T 2a7l_A 20 MASMQKRLQKELLALQNDPPPGMTLNEKSVQ----NSITQWIVDMEGAPGT----LYEGEKFQLLFKFSSRYPFDSPQVM 91 (136)
T ss_dssp GTTSCHHHHHHHHHHHHSCCTTCCCCTTCCC----CSCEEEEEEEECCTTS----TTTTCEEEEEEEECTTTTTSCCEEE
T ss_pred ccHHHHHHHHHHHHHHhCCCCCEEEEEeeCc----cccceeEEEEECCCCC----ccccEEEEEEEECCCCCCCCCCEEE
Confidence 44444677789999986433344321 1110 0124566666543221 1223468899999999999999998
Q ss_pred Eecc
Q 031565 80 VKSL 83 (157)
Q Consensus 80 l~~~ 83 (157)
+...
T Consensus 92 F~T~ 95 (136)
T 2a7l_A 92 FTGE 95 (136)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8764
No 9
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=96.39 E-value=0.021 Score=40.04 Aligned_cols=74 Identities=11% Similarity=0.065 Sum_probs=42.4
Q ss_pred CCCcHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceE
Q 031565 1 MTDHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNV 80 (157)
Q Consensus 1 m~~~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l 80 (157)
|.....+...|+..|+.==+..+.+.-.. .+-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+
T Consensus 4 m~~a~~RL~kEl~~l~~~~~~~~~~~~~~-----~~l~~w~~~i~GP~~t----pYegg~f~~~i~fp~~YP~~PP~v~f 74 (125)
T 2fo3_A 4 MGNANYRIQKELHNFLNNPPINCTLDVHP-----NNIRIWIVKYVGLENT----IYANEVYKLKIIFPDDYPLKPPIVYF 74 (125)
T ss_dssp -----CHHHHHHHHHHHSCCTTEEEEECT-----TCTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCc-----chhhhhheEEeCCCCC----CcCCCEEEEEEEcCCCCCCCCCEEEE
Confidence 44455667789998876333333321110 0224666666532211 12234688999999999999999988
Q ss_pred ecc
Q 031565 81 KSL 83 (157)
Q Consensus 81 ~~~ 83 (157)
...
T Consensus 75 ~t~ 77 (125)
T 2fo3_A 75 LQK 77 (125)
T ss_dssp CSS
T ss_pred eCC
Confidence 764
No 10
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=96.25 E-value=0.045 Score=38.93 Aligned_cols=72 Identities=8% Similarity=0.060 Sum_probs=43.9
Q ss_pred CcHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEec
Q 031565 3 DHVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKS 82 (157)
Q Consensus 3 ~~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~ 82 (157)
....+...|+..|+.==+..+.+.-. . ..-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+..
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~~~~~~~-~----~nl~~W~~~I~GP~~t----pYegg~f~~~i~fp~~YP~~PP~v~f~t 90 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPINCTIDVH-P----SNIRIWIVQYVGLENT----IYANEVYKIKIIFPDNYPLKPPIVYFLQ 90 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTTEEEEEC-T----TCTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEEECS
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEec-c----ccccccEEEEECCCCC----ceeCCEEEEEEEeCCCCCCCCCEEEEeC
Confidence 34567778999887633333332111 0 1234666666532211 1223468899999999999999998876
Q ss_pred c
Q 031565 83 L 83 (157)
Q Consensus 83 ~ 83 (157)
.
T Consensus 91 ~ 91 (136)
T 2h2y_A 91 K 91 (136)
T ss_dssp S
T ss_pred C
Confidence 4
No 11
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=96.10 E-value=0.034 Score=40.21 Aligned_cols=74 Identities=15% Similarity=0.205 Sum_probs=44.4
Q ss_pred CCC-cHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcce
Q 031565 1 MTD-HVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLN 79 (157)
Q Consensus 1 m~~-~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~ 79 (157)
|++ ...+...|+..|+.-=+..+....... .-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~-----~l~~w~~~i~Gp~~t----pyegg~f~~~i~fp~~YP~~PP~v~ 71 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDT----PWDGGTFKLSLQFSEDYPNKPPTVR 71 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETT-----EEEEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCC-----CccEEEEEEeCCCCC----CccCCEEEEEEECCCCCCCCCCEEE
Confidence 554 455677899999874444443321100 123455555432111 1123468899999999999999998
Q ss_pred Eecc
Q 031565 80 VKSL 83 (157)
Q Consensus 80 l~~~ 83 (157)
+...
T Consensus 72 f~t~ 75 (152)
T 2aak_A 72 FVSR 75 (152)
T ss_dssp ESSC
T ss_pred EecC
Confidence 8764
No 12
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=95.95 E-value=0.064 Score=39.03 Aligned_cols=71 Identities=17% Similarity=0.147 Sum_probs=42.5
Q ss_pred cHHHHHHHHHHHHh---hcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceE
Q 031565 4 HVQEQEMEIEALEA---ILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNV 80 (157)
Q Consensus 4 ~~e~q~eEleAL~S---IY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l 80 (157)
...+...|+..|+. .-+..+....... .-..+.+.|.+..+. .-..-.+.+.+.||++||..||.+.+
T Consensus 9 a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~-----~l~~w~~~i~Gp~~t----pyegg~f~~~i~fp~~YP~~PP~v~f 79 (159)
T 2bep_A 9 AVQRIKREFKEVLKSEETSKNQIKVDLVDE-----NFTELRGEIAGPPDT----PYEGGRYQLEIKIPETYPFNPPKVRF 79 (159)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSS-----SSSEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCCCEEEEeCCC-----chheEEEEEECCCCC----CccCCEEEEEEeCCCcCCCCCCEEEe
Confidence 45566788998876 2222332221110 124666666532211 11234688999999999999999988
Q ss_pred ecc
Q 031565 81 KSL 83 (157)
Q Consensus 81 ~~~ 83 (157)
...
T Consensus 80 ~t~ 82 (159)
T 2bep_A 80 ITK 82 (159)
T ss_dssp SSC
T ss_pred eCC
Confidence 763
No 13
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=95.94 E-value=0.04 Score=40.72 Aligned_cols=73 Identities=12% Similarity=0.210 Sum_probs=43.2
Q ss_pred CCC-cHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcce
Q 031565 1 MTD-HVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLN 79 (157)
Q Consensus 1 m~~-~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~ 79 (157)
|+. ...+...|+..|+.--+..+....... .-..+.+.+.+..+. .-..-.+.+.+.||.+||..||.|.
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~-----nl~~W~~~I~GP~~t----pYegG~f~l~i~fp~~YP~~PP~v~ 71 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPD-----NVMVWNAMIIGPADT----PYEDGTFRLLLEFDEEYPNKPPHVK 71 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETT-----EEEEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCC-----ccccceEEEECCCCC----CcCCCEEEEEEECcccCCCCCCccc
Confidence 554 445667899999875444443321100 123455555432111 1223468899999999999999998
Q ss_pred Eec
Q 031565 80 VKS 82 (157)
Q Consensus 80 l~~ 82 (157)
+..
T Consensus 72 F~t 74 (169)
T 1ayz_A 72 FLS 74 (169)
T ss_dssp ESS
T ss_pred ccc
Confidence 865
No 14
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=95.93 E-value=0.042 Score=39.83 Aligned_cols=71 Identities=17% Similarity=0.271 Sum_probs=45.6
Q ss_pred cHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 4 HVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 4 ~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
...+...|+..|+.-=+..+....+.. ..-..+.+.+.|.+.. -..-.+.+.+.||++||..||.+.+...
T Consensus 5 ~~~RL~kEl~~l~~~~~~~i~~~~~~~----~~l~~w~~~I~P~~tp-----yegg~f~~~i~fp~~YP~~PP~v~f~t~ 75 (155)
T 1wzv_A 5 ASMRVVKELEDLQKKPPPYLRNLSSDD----ANVLVWHALLLPDQPP-----YHLKAFNLRISFPPEYPFKPPMIKFTTK 75 (155)
T ss_dssp CHHHHHHHHHHHHHSCCTTEEEEEECS----SCTTEEEEEECCCSTT-----GGGEEEEEEEECCTTTTSSCCEEEESSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCC----CchheEEEEEcCCCCC-----CCCCEEEEEEECCCCCCCCCCcceeeCC
Confidence 556778899999875555554422111 0224566666543321 1234688999999999999999988764
No 15
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=95.88 E-value=0.069 Score=38.84 Aligned_cols=70 Identities=16% Similarity=0.129 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-=+..+.+.... .+-..+.+.+.+..+. .-..-.+.+.+.||.+||..||.+.+...
T Consensus 15 ~~RL~kEl~~l~~~~~~gi~~~~~~-----~~l~~w~~~i~Gp~~t----pyegg~f~~~i~fp~~YP~~PP~v~f~t~ 84 (158)
T 1zdn_A 15 IRLVYKEVTTLTADPPDGIKVFPNE-----EDLTDLQVTIEGPEGT----PYAGGLFRMKLLLGKDFPASPPKGYFLTK 84 (158)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEECS-----SCTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECC-----CChhheeEEEECCCCC----CccCcEEEEEEEcCCCCCCCCCEEEeccC
Confidence 3466789999886444444332211 1234666666532221 11234688999999999999999998875
No 16
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=95.83 E-value=0.08 Score=38.93 Aligned_cols=70 Identities=17% Similarity=0.195 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-=+..+.+.... .....+.+.+.+..+. .-..-.+.+.+.||++||..||.|.+...
T Consensus 23 ~~RL~kEl~~l~~~~~~gi~~~~~~-----~nl~~W~~~I~GP~~T----pYegG~f~l~i~fp~~YP~~PP~V~F~T~ 92 (166)
T 2ayv_A 23 LKRINKELNDLSKDPPTNCSAGPVG-----DDMFHWQATIMGPEDS----PYSGGVFFLNIHFPSDYPFKPPKVNFTTK 92 (166)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEECS-----SCTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEcC-----CCcceeeEEEECCCCC----CcCCCEEEEEEeCCCcCCCCCceeeeccC
Confidence 4566788999987433344332111 1235666666632221 12234688999999999999999988764
No 17
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=95.80 E-value=0.091 Score=38.07 Aligned_cols=71 Identities=15% Similarity=0.235 Sum_probs=43.5
Q ss_pred cHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 4 HVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 4 ~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
...+...|+..|+.==+..+...... ..-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 10 ~~~RL~kEl~~l~~~~~~~i~~~p~~-----~~l~~w~~~i~Gp~~t----pyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (156)
T 2e2c_A 10 VSKRLQQELRTLLMSGDPGITAFPDG-----DNLFKWVATLDGPKDT----VYESLKYKLTLEFPSDYPYKPPVVKFTTP 80 (156)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEESS-----SCTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECC-----CCccEEEEEEECCCCC----CcCCcEEEEEEECCCCCCCCCCEEEEeCC
Confidence 45667789999986333334332111 0124566666532211 11234688999999999999999988764
No 18
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=95.78 E-value=0.073 Score=38.56 Aligned_cols=70 Identities=17% Similarity=0.189 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-=+..+...... ..-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 7 ~~RL~kEl~~l~~~~~~~i~~~~~~-----~~l~~w~~~i~GP~~t----pyegg~f~~~i~fp~~YP~~PP~v~f~t~ 76 (154)
T 2c2v_B 7 PRRIIKETQRLLAEPVPGIKAEPDE-----SNARYFHVVIAGPQDS----PFEGGTFKLELFLPEEYPMAAPKVRFMTK 76 (154)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEECS-----SCTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECC-----CchheEEEEEECCCCC----CcCCCeEEEEEEcCCCCCCCCCEEEeecC
Confidence 3466788988876433334332111 0234666666532211 11234688999999999999999998774
No 19
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=95.67 E-value=0.075 Score=39.23 Aligned_cols=70 Identities=10% Similarity=0.131 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-=+..+...... .+-..+.+.|.+..+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 25 ~~RL~kEl~~l~~~~~~gi~~~p~~-----~nl~~W~~~I~GP~~T----pYegG~f~l~i~fp~~YP~~PP~V~F~T~ 94 (169)
T 1yrv_A 25 YLLLHRDFCDLKENNYKGITAKPVS-----EDMMEWEVEIEGLQNS----VWQGLVFQLTIHFTSEYNYAPPVVKFITI 94 (169)
T ss_dssp HHHHHHHHHHHHHHCCTTEEEEECS-----TTSCEEEEEEECCTTS----TTTTCEEEEEEECCTTBTTBCCEEEESSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEcC-----CccccceeEEECCCCC----CccceEEEEEEECCccCCCCCCcceecCC
Confidence 4566778888876444444332111 1235666776532211 12234688999999999999999998874
No 20
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=95.55 E-value=0.1 Score=38.18 Aligned_cols=72 Identities=13% Similarity=0.086 Sum_probs=42.6
Q ss_pred cHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 4 HVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 4 ~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
...+...|+..|+.-=+..+....... .+-..+.+.+.+..+. .-..-.+.+.+.||.+||..||.+.+.+.
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~~~~~----~~l~~w~~~i~GP~~t----pYegg~f~~~i~fp~~YP~~PP~v~f~t~ 76 (165)
T 2ucz_A 5 AQKRLLKELQQLIKDSPPGIVAGPKSE----NNIFIWDCLIQGPPDT----PYADGVFNAKLEFPKDYPLSPPKLTFTPS 76 (165)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSS----SCCSEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCC----CCccEEEEEEECCCCC----CccCcEEEEEEECCccCCCCCCEEEEeCC
Confidence 345667889998864333343321100 0124555555432211 12234688999999999999999988764
No 21
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=95.53 E-value=0.13 Score=38.38 Aligned_cols=72 Identities=13% Similarity=0.162 Sum_probs=44.8
Q ss_pred cHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 4 HVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 4 ~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
...+...|+..|+.-=+..+.+.-... ..-..+.+.|....+. .-..-.+.+.+.||.+||..||.+.+...
T Consensus 8 a~kRL~kEl~~l~~~~~~gi~~~~~~~----~nl~~W~~~I~Gp~~t----pyegg~f~~~i~fp~~YP~~PP~v~f~t~ 79 (183)
T 3rz3_A 8 SQKALLLELKGLQEEPVEGFRVTLVDE----GDLYNWEVAIFGPPNT----YYEGGYFKARLKFPIDYPYSPPAFRFLTK 79 (183)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTT----CCTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCc----cchhheeeeeeCCCCC----CCCCCeEEEEEECCCCCCCCCCeeEecCC
Confidence 456777899998875444443321111 0125666666532211 12234678999999999999999988764
No 22
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=95.53 E-value=0.067 Score=38.74 Aligned_cols=70 Identities=17% Similarity=0.172 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-=+..+....... .-..+.+.|.+..+. .-..-.+.+.+.||.+||..||.+.+...
T Consensus 7 ~~RL~kE~~~l~~~~~~~i~~~~~~~-----~l~~w~~~I~Gp~~t----pyegg~f~~~i~fp~~YP~~PP~v~f~t~ 76 (155)
T 1jat_A 7 PKRIIKETEKLVSDPVPGITAEPHDD-----NLRYFQVTIEGPEQS----PYEDGIFELELYLPDDYPMEAPKVRFLTK 76 (155)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEETT-----EEEEEEEEEECCTTS----TTTTEEEEEEEECCTTTTTSCCEEEECSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCC-----chhEEEEEEECCCCC----CccCcEEEEEEEcCCCCCCCCCcceeecc
Confidence 35667889988864333343321110 124555666432211 12235788999999999999999988764
No 23
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=95.49 E-value=0.11 Score=38.17 Aligned_cols=70 Identities=16% Similarity=0.177 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-=+..+...... .+...+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 21 ~~RL~kEl~~l~~~~~~gi~~~p~~-----~nl~~W~~~I~GP~~T----pYegg~f~l~i~fp~~YP~~PP~v~F~T~ 90 (165)
T 2c4o_A 21 LKRIHKELNDLARDPPAQCSAGPVG-----DDMFHWQATIMGPNDS----PYQGGVFFLTIHFPTDYPFKPPKVAFTTR 90 (165)
T ss_dssp HHHHHHHHHHHHSSCCTTEEEEESS-----SCTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEcC-----CCcceeEEEEECCCCC----CccCceEEEEEECCCcCCCCCCEEEEecC
Confidence 4566788998876433333322111 1235666666632221 11234688999999999999999988764
No 24
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=95.43 E-value=0.066 Score=40.44 Aligned_cols=70 Identities=13% Similarity=0.127 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-=+..+...... ..-..+.+.|.+..+. .-..-.+.|.|.||.+||..||.|.+...
T Consensus 50 ~~RL~kEl~~l~~~~~~gi~~~p~~-----~nl~~W~~~I~GP~~T----pYegG~f~l~i~fp~~YP~~PP~V~F~T~ 119 (194)
T 3bzh_A 50 AKRIQKELADITLDPPPNCSAGPKG-----DNIYEWRSTILGPPGS----VYEGGVFFLDITFTPEYPFKPPKVTFRTR 119 (194)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEESS-----SCTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred HHHHHHHHHHHHhCCCCCceeeccc-----CccccceEEEeCCCCC----CccCCEEEEEEECCCcCCCCCccccccCC
Confidence 4566788988886433333322111 0124555555432211 11234688999999999999999988764
No 25
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=95.43 E-value=0.091 Score=38.65 Aligned_cols=70 Identities=13% Similarity=0.116 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-=+..+...... ..-..+.+.+.+..+. .-..-.+.+.+.||.+||..||.+.+.+.
T Consensus 6 ~~RL~kEl~~l~~~~~~gi~~~~~~-----~~l~~w~~~I~GP~~t----pYegg~f~~~i~fp~~YP~~PP~v~f~t~ 75 (169)
T 1yh2_A 6 ASRLKRELHMLATEPPPGITCWQDK-----DQMDDLRAQILGGANT----PYEKGVFKLEVIIPERYPFEPPQIRFLTP 75 (169)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEESS-----SCTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEeCC-----CchheEEEEEECCCCC----CccCCEEEEEEEeCCCCCCCCcEEEeecC
Confidence 4566788999886433344332111 0124555655432211 12234688999999999999999987653
No 26
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=95.42 E-value=0.084 Score=37.99 Aligned_cols=70 Identities=14% Similarity=0.156 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-=+..+...... ..-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 6 ~~RL~kEl~~l~~~~~~~~~~~~~~-----~~l~~w~~~i~Gp~~t----pyegg~f~~~i~fp~~YP~~PP~v~f~t~ 75 (150)
T 1z2u_A 6 LKRIQKELQDLGRDPPAQCSAGPVG-----DDLFHWQATIMGPPES----PYQGGVFFLTIHFPTDYPFKPPKVAFTTR 75 (150)
T ss_dssp HHHHHHHHHHHHHSCCSSEEEEEET-----TEEEEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECC-----CcceEEEEEEECCCCC----CcCCCEEEEEEECCCCCCCCCcEEEEecC
Confidence 3566788999987433344322110 0124555666532211 12234688999999999999999988764
No 27
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=95.36 E-value=0.14 Score=36.84 Aligned_cols=70 Identities=13% Similarity=0.108 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-=+..+...... .+-..+.+.+.+..+. .-..-.+.+.+.||++||..+|.+.+...
T Consensus 6 ~~RL~kEl~~l~~~~~~~i~~~p~~-----~nl~~w~~~i~Gp~~t----pyegg~f~~~i~fp~~YP~~pP~v~f~t~ 75 (151)
T 4gpr_A 6 MRRIQKELREIQQDPPCNCSAGPVG-----DDIFHWTATITGPDDS----PYQGGLFFLDVHFPVDYPFKAPRVTFMTK 75 (151)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEESS-----SCTTEEEEEEECCSSS----TTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEcC-----CCceEEEEEEeCCCCC----CcCCCEEEEEEECCCCCCCCcceeEEecC
Confidence 4566788888886433333322111 1235666776632221 12234688999999999999999988764
No 28
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=95.26 E-value=0.089 Score=37.83 Aligned_cols=69 Identities=17% Similarity=0.207 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 6 QEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 6 e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
.+...|+..|+.-=+..+....... +-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 4 ~RL~kEl~~l~~~~~~~i~~~~~~~-----~l~~w~~~i~Gp~~t----pyegg~f~~~i~fp~~YP~~PP~v~f~t~ 72 (149)
T 2r0j_A 4 RRITKETQNLANEPPPGIMAVPVPE-----NYRHFNILINGPDGT----PYEGGTYKLELFLPEQYPMEPPKVRFLTK 72 (149)
T ss_dssp HHHHHHHHHHHHSCCTTEEEEEETT-----EEEEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEEECSC
T ss_pred HHHHHHHHHHHhCCCCCEEEEECCC-----cccEEEEEEECCCCC----CcCCCEEEEEEeCCcccCCCCCeeEeccC
Confidence 3556788888763333333221100 124555555432211 12234688999999999999999988764
No 29
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=95.23 E-value=0.17 Score=36.80 Aligned_cols=71 Identities=14% Similarity=0.113 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.==+..+....... ..-..+.+.|.+..+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 5 ~~RL~kEl~~l~~~~~~gi~~~~~~~----~nl~~w~~~I~Gp~~t----pyegg~f~~~i~fp~~YP~~PP~v~f~t~ 75 (164)
T 3h8k_A 5 LKRLMAEYKQLTLNPPEGIVAGPMNE----ENFFEWEALIMGPEDT----CFEFGVFPAILSFPLDYPLSPPKMRFTCE 75 (164)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEESST----TCTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCC----CCccEEEEEEeCCCCC----CCCCCEEEEEEECCCCCCCCCCEEEEcCC
Confidence 45667888888864333443321110 0124666666532221 12234688999999999999999988764
No 30
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=95.20 E-value=0.099 Score=38.26 Aligned_cols=71 Identities=20% Similarity=0.229 Sum_probs=43.9
Q ss_pred cHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 4 HVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 4 ~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
...+...|+..|+.=-+..+.+.-... ..-..+.+.+.|.+.. -..-.+.+.+.||++||..||.+.+...
T Consensus 15 ~~~RL~kEl~~l~~~~~~gi~~~~~~~----~~l~~w~~~igp~~tp-----yegg~f~~~i~fp~~YP~~pP~v~f~t~ 85 (167)
T 3fn1_B 15 RDKLLVKEVAELEANLPCTCKVHFPDP----NKLHCFQLTVTPDEGY-----YQGGKFQFETEVPDAYNMVPPKVKCLTK 85 (167)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEECSSS----SCTTEEEEEECCSSST-----TTTCCEEEEEECCTTBTTBCCEEEECSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCC----CcceeEEEEECCCCCc-----cCCCEEEEEEECCCCCCCCCCeeEecCC
Confidence 345667899998875444444321110 0124566666544321 1224577899999999999999988764
No 31
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=95.09 E-value=0.16 Score=38.92 Aligned_cols=70 Identities=11% Similarity=0.163 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-=+..+.+..... .-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 25 ~~RL~kEl~~l~~~~~~gi~~~p~~~-----nl~~W~~~I~GP~~T----pYegG~f~l~i~fP~~YP~~PP~V~F~T~ 94 (216)
T 2pwq_A 25 LLRLQKELKDIENENVQEIDAHIKDS-----NFFEWVGFIKGPEGT----PYEGGHFTLAITIPNDYPYNPPKIKFVTK 94 (216)
T ss_dssp HHHHHHHHHHHHHSCTTTEEEEECSS-----CTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEcCC-----ccceeEEEEeCCCCC----CccceEEEEEEECCCcCCCCCCcccccCC
Confidence 44567788888764333343321110 135666666532211 12234688999999999999999988763
No 32
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=94.98 E-value=0.19 Score=36.00 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-=+..+...-... ..-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 3 ~~RL~~El~~l~~~~~~~i~~~~~~~----~~l~~w~~~I~Gp~~t----pyegg~f~~~i~fp~~YP~~PP~v~f~t~ 73 (149)
T 1fxt_A 3 AKRIMKEIQAVKDDPAAHITLEFVSE----SDIHHLKGTFLGPPGT----PYEGGKFVVDIEVPMEYPFKPPKMQFDTK 73 (149)
T ss_dssp HHHHHHHHHHHHHCGGGCCEEEESSS----SCSSEEEEEEECCSSS----TTCSSEEEEEEECCTTTTSSCCEEEESSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCC----CCceEEEEEEECCCCC----CcCCcEEEEEEECCCCCCCCCCEEEEeCC
Confidence 35667788888764333333221110 0124566666532211 11234688999999999999999998764
No 33
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=94.89 E-value=0.26 Score=36.27 Aligned_cols=71 Identities=11% Similarity=0.120 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-=+..+...-... ..-..+.+.+....+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 19 ~~rL~kEl~~l~~~~~~gi~~~p~~~----~nl~~W~~~I~GP~~T----pYegG~f~~~i~fp~~YP~~PP~v~F~T~ 89 (172)
T 2awf_A 19 SLLLRRQLAELNKNPVEGFSAGLIDD----NDLYRWEVLIIGPPDT----LYEGGVFKAHLTFPKDYPLRPPKMKFITE 89 (172)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEESST----TCTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCC----ccccccEEEEeCCCCC----CcCCcEEEEEEECCcccCCCCCcccccCC
Confidence 34556788888874333443321100 0124566655432211 11234688999999999999999998775
No 34
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=94.83 E-value=0.19 Score=37.90 Aligned_cols=70 Identities=16% Similarity=0.135 Sum_probs=41.8
Q ss_pred cHHHHHHHHHHHHhh---cCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceE
Q 031565 4 HVQEQEMEIEALEAI---LMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNV 80 (157)
Q Consensus 4 ~~e~q~eEleAL~SI---Y~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l 80 (157)
...+...|+..|+.- -+..+...... ..-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+
T Consensus 6 a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~-----~nl~~w~~~i~Gp~~t----pyegg~f~~~i~fp~~YP~~pP~v~f 76 (201)
T 3k9o_A 6 AVQRIKREFKEVLKSEETSKNQIKVDLVD-----ENFTELRGEIAGPPDT----PYEGGRYQLEIKIPETYPFNPPKVRF 76 (201)
T ss_dssp THHHHHHHHHHHHTCHHHHTTSEEEEECS-----TTSSEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEECC-----CCccEEEEEEECCCCC----CCCCCEEEEEEECCCcCCCCCCcccc
Confidence 456677888888642 12222221110 0235666666532211 12234588999999999999999988
Q ss_pred ec
Q 031565 81 KS 82 (157)
Q Consensus 81 ~~ 82 (157)
..
T Consensus 77 ~t 78 (201)
T 3k9o_A 77 IT 78 (201)
T ss_dssp SS
T ss_pred cc
Confidence 76
No 35
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=94.82 E-value=0.19 Score=37.00 Aligned_cols=71 Identities=13% Similarity=0.125 Sum_probs=42.2
Q ss_pred cHHHHHHHHHHHHh-h--c-----CC---ceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCC
Q 031565 4 HVQEQEMEIEALEA-I--L-----MD---EFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYP 72 (157)
Q Consensus 4 ~~e~q~eEleAL~S-I--Y-----~d---~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP 72 (157)
...+...|+..|+. . - ++ .+....... ..-..+.+.|.+..+. .-..-.+.+.+.||++||
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~----~nl~~w~~~I~Gp~~t----pyegg~f~~~i~fp~~YP 78 (172)
T 2y9m_A 7 CMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDE----TDLSKWEAIISGPSDT----PYENHQFRILIEVPSSYP 78 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESST----TCTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTT
T ss_pred HHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCC----CchhEEEEEEECCCCC----cccCCEEEEEEECCCcCC
Confidence 34566789999987 3 1 22 111111010 0134666666532211 122346889999999999
Q ss_pred CCCCcceEec
Q 031565 73 DEPPLLNVKS 82 (157)
Q Consensus 73 ~~~P~i~l~~ 82 (157)
..||.+.+..
T Consensus 79 ~~PP~v~f~t 88 (172)
T 2y9m_A 79 MNPPKISFMQ 88 (172)
T ss_dssp TSCCEEEECT
T ss_pred CCCCEEEEee
Confidence 9999999887
No 36
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=94.82 E-value=0.03 Score=40.54 Aligned_cols=68 Identities=19% Similarity=0.331 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 7 EQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 7 ~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
+...|+..|+.--+..+....... ..-..+.+.+.|.+.. -..-.+.+.+.||.+||..||.+.+...
T Consensus 6 RL~kEl~~l~~~~~~~~~~~~~~~----~~l~~w~~~i~P~~tp-----yegg~f~~~i~fp~~YP~~PP~v~f~t~ 73 (154)
T 1c4z_D 6 RLMKELEEIRKCGMKNFRNIQVDE----ANLLTWQGLIVPDNPP-----YDKGAFRIEINFPAEYPFKPPKITFKTK 73 (154)
T ss_dssp THHHHHTTCSSSCCSSCEEECSSC----SSSSEEEEEECCCSSS-----CCSCCEEEEEECCTTTTTSCCEEEESSC
T ss_pred HHHHHHHHHHhCCCCCEEEeeCCC----CchheEEEEEeCCCCC-----ccCCeEEEEEEeCCCCCCCCCEEEEeCC
Confidence 455677766653333343221110 0124556666543321 1223577899999999999999988764
No 37
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=94.76 E-value=0.14 Score=37.26 Aligned_cols=76 Identities=11% Similarity=0.106 Sum_probs=42.7
Q ss_pred cHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 4 HVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 4 ~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
...+...|+..|+.--+..+.........-...-..+.+.|.+..+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 8 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~t----pyegg~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 8 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGT----PWEGGLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCC----CccCCEEEEEEEcCcccCCCCCEEEEecC
Confidence 34567789999986544444322100000000113445555432211 11234578999999999999999988764
No 38
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=94.67 E-value=0.12 Score=38.60 Aligned_cols=66 Identities=12% Similarity=0.131 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+. +.+.+.-.. +...+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 27 ~~RL~kEl~~l~~---~g~~v~~~d------dl~~W~~~I~GP~~t----pYegG~f~l~i~fp~~YP~~PP~V~F~t~ 92 (179)
T 2z5d_A 27 KRRMDTDVIKLIE---SKHEVTILG------GLNEFVVKFYGPQGT----PYEGGVWKVRVDLPDKYPFKSPSIGFMNK 92 (179)
T ss_dssp HHHHHHHHHHHHH---SSSCEEEEE------ETTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred HHHHHHHHHhcCc---CCCEEEECC------CCceeEEEEECCCCC----CccCCEEEEEeeCCCCCCCCCceEEEecC
Confidence 4566788888873 333221110 124566665432211 11234688999999999999999998774
No 39
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=94.67 E-value=0.15 Score=36.93 Aligned_cols=78 Identities=13% Similarity=0.158 Sum_probs=42.5
Q ss_pred CCC-cHHHHHHHHHHHHhhcCCceeecccCc-cCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcc
Q 031565 1 MTD-HVQEQEMEIEALEAILMDEFKEIHSGE-SGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLL 78 (157)
Q Consensus 1 m~~-~~e~q~eEleAL~SIY~d~~~~~~~~~-~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i 78 (157)
|++ ...+...|+..|+.==+..+....... .+ ...-..+.+.|.+..+. .-..-.+.+.+.||++||..||.+
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~-~~nl~~w~~~I~Gp~~t----pyegg~f~~~i~fp~~YP~~PP~v 75 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADG-SMDLQKWEAGIPGKEGT----NWAGGVYPITVEYPNEYPSKPPKV 75 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTS-CEEEEEEEEEEECCTTS----TTTTBEEEEEEECCTTTTTSCCEE
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCC-CCcccEEEEEEECCCCC----CcCCeEEEEEEEcCCCCCCCCCee
Confidence 443 345677889888864333332211000 00 00113445555432211 122346889999999999999999
Q ss_pred eEecc
Q 031565 79 NVKSL 83 (157)
Q Consensus 79 ~l~~~ 83 (157)
.+.+.
T Consensus 76 ~f~t~ 80 (157)
T 2gjd_A 76 KFPAG 80 (157)
T ss_dssp ECCTT
T ss_pred eccCC
Confidence 88764
No 40
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=94.65 E-value=0.13 Score=37.73 Aligned_cols=42 Identities=17% Similarity=0.308 Sum_probs=29.3
Q ss_pred ceEEEEecCCCCCCCcCCCC--CeEEEEEEEecCCCCCCCCcceEecc
Q 031565 38 QCFQVTLSPQDDEADESTMP--PVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 38 ~~f~I~l~~~~~~~~~~~~~--~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+.+.+.+..+. .-. .-.+.+.+.||.+||..+|.+.+...
T Consensus 50 ~~w~~~i~Gp~~t----pye~~gg~f~~~i~fp~~YP~~pP~v~f~t~ 93 (167)
T 4ds2_A 50 YNWILKVKAPADS----VYGGAGNTYQLSVLFSDDYPHEPPTVRFVTP 93 (167)
T ss_dssp TEEEEEEECCTTS----GGGTTCCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred cEEEEEEECCCCC----CccCCCCEEEEEEECCCCCCCCCCEEEEeCC
Confidence 5666666643221 112 34688999999999999999988774
No 41
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=94.64 E-value=0.081 Score=39.77 Aligned_cols=40 Identities=20% Similarity=0.309 Sum_probs=28.8
Q ss_pred eEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 39 CFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 39 ~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
.+.+.|.|.+.. -..-.+.+.+.||++||..||.+.+...
T Consensus 65 ~w~~~I~p~~tp-----yegg~f~~~i~fp~~YP~~PP~v~f~t~ 104 (190)
T 3o2u_A 65 KLEVIVRPDEGY-----YNYGSINFNLDFNEVYPIEPPKVVCLKK 104 (190)
T ss_dssp EEEEEECCSSST-----TTTCCEEEEEECCTTTTTSCCEEEECSC
T ss_pred eEEEEEcCCCCC-----CCCCEEEEEEECCCCCCCCCceeEEecC
Confidence 667777654321 2234577999999999999999988764
No 42
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=94.56 E-value=0.06 Score=39.30 Aligned_cols=69 Identities=14% Similarity=0.291 Sum_probs=41.0
Q ss_pred cHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 4 HVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 4 ~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
...+...|+..|+. +..+...-+.. .+-..+.+.+.|.+.. -..-.+.+.+.||.+||..||.+.+...
T Consensus 7 ~~~RL~kEl~~l~~--~~~~~~~~~~~----~~l~~w~~~igp~~tp-----yegg~f~~~i~fp~~YP~~PP~v~f~t~ 75 (160)
T 1y8x_A 7 AQLRIQKDINELNL--PKTCDISFSDP----DDLLNFKLVICPDEGF-----YKSGKFVFSFKVGQGYPHDPPKVKCETM 75 (160)
T ss_dssp HHHHHHHHHHTCCC--CTTEEEECSST----TCTTEEEEEECCSSST-----TTTBCEEEEEECCTTTTTSCCEEEECSC
T ss_pred HHHHHHHHHHhcCC--CCCeEEEeccC----CccceEEEEECCCCCC-----CCCCEEEEEEeCCCcCCCCCCEEEEecC
Confidence 44566778887731 22333221111 1224566666543321 1234578899999999999999988764
No 43
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=94.43 E-value=0.18 Score=37.49 Aligned_cols=71 Identities=10% Similarity=0.072 Sum_probs=41.5
Q ss_pred cHHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 4 HVQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 4 ~~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
...+...|+..|+.-=+..+....... .-..+.+.+.+..+. .-..-.+.+.+.||.+||..||.|.+...
T Consensus 31 ~~~RL~kEl~~l~~~~~~gi~~~p~~~-----nl~~W~~~I~GP~~T----pYegG~f~l~i~fp~~YP~~PP~V~F~T~ 101 (179)
T 1i7k_A 31 VGKRLQQELMTLMMSGDKGISAFPESD-----NLFKWVGTIHGAAGT----VYEDLRYKLSLEFPSGYPYNAPTVKFLTP 101 (179)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEEETT-----EEEEEEEEEEBCTTS----TTBTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCC-----cccccEEEEECCCCC----CcCCCEEEEEEECCCcCCCCCceEEEecC
Confidence 345667788888763223333221100 123445555432211 11234688999999999999999988764
No 44
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=94.28 E-value=0.23 Score=37.10 Aligned_cols=70 Identities=6% Similarity=-0.022 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.==+..+..... . ..-..+.+.|.+..+. .-..-.+.+.+.||.+||..||.|.+...
T Consensus 16 ~~RL~kEl~~l~~~~~~~i~~~p~-~----~nl~~W~~~I~GP~~T----pYegG~f~l~i~fP~~YP~~PP~v~f~T~ 85 (187)
T 2f4w_A 16 TQRLKQDYLRIKKDPVPYICAEPL-P----SNILEWHYVVRGPEMT----PYEGGYYHGKLIFPREFPFKPPSIYMITP 85 (187)
T ss_dssp HHHHHHHHHHHHHSCCTTEEEEEE-T----TEEEEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEc-C----CccceeEEEEeCCCCC----CCCCCEEEEEEEcCCCCCCCCCcccccCC
Confidence 456678899888633333332111 0 0123555555522211 12234688999999999999999988764
No 45
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=93.95 E-value=0.35 Score=35.32 Aligned_cols=71 Identities=13% Similarity=0.069 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhhcCCc-eeec--ccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEe
Q 031565 5 VQEQEMEIEALEAILMDE-FKEI--HSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVK 81 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~-~~~~--~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~ 81 (157)
..+...|+..|+.=-++. +... +++. -.-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+.
T Consensus 27 ~~RL~kEl~~l~~~~~~g~~~~~~~~~~d----~~l~~W~~~I~GP~~T----pYegG~f~l~i~fp~~YP~~PP~v~F~ 98 (160)
T 2a4d_A 27 NFRLLEELEEGQKGVGDGTVSWGLEDDED----MTLTRWTGMIIGPPRT----IYENRIYSLKIECGPKYPEAPPFVRFV 98 (160)
T ss_dssp HHHHHHHHHHHHSCCTTSSEEEEESSTTC----TTCCEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEecCCcc----ccceeeEEEEECCCCC----CccCeEEEEEEECCCcCCCCCcEEEEe
Confidence 346678899888633333 3221 1110 0023566666532211 112346889999999999999999987
Q ss_pred cc
Q 031565 82 SL 83 (157)
Q Consensus 82 ~~ 83 (157)
..
T Consensus 99 T~ 100 (160)
T 2a4d_A 99 TK 100 (160)
T ss_dssp BC
T ss_pred cC
Confidence 75
No 46
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=93.81 E-value=0.28 Score=36.94 Aligned_cols=25 Identities=20% Similarity=0.345 Sum_probs=22.0
Q ss_pred eEEEEEEEecCCCCCCCCcceEecc
Q 031565 59 VELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 59 ~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
-.+.+.+.||++||..||.|.+...
T Consensus 92 G~f~l~i~fp~~YP~~PP~V~F~T~ 116 (193)
T 2f4z_A 92 GHFTLDIVIPPDYPYNPPKMKFVTK 116 (193)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CEEEEEEECCCcCCCCCCeEEEecC
Confidence 4688999999999999999988763
No 47
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=93.64 E-value=0.35 Score=35.35 Aligned_cols=74 Identities=14% Similarity=0.124 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHhhcCCceeeccc-CccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHS-GESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~-~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.==+..+..... ...+ ...-..+.+.|.+..+. .-..-.+.|.+.||++||..+|.+.+...
T Consensus 12 ~~RL~kEl~~l~~~~p~gi~~~p~~~~d~-~~nl~~W~~~I~Gp~~T----pyegg~f~l~i~fp~~YP~~pP~v~F~t~ 86 (163)
T 3rcz_B 12 KTRLQEERKQWRRDHPFGFYAKPCKSSDG-GLDLMNWKVGIPGKPKT----SWEGGLYKLTMAFPEEYPTRPPKCRFTPP 86 (163)
T ss_dssp HHHHHHHHHHHHHSCCTTCEEEEEECTTS-SEEEEEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEccCcCC-CCCccEEEEEEECCCCC----CcCCCEEEEEEECCCCCCCCCCEEEEeCC
Confidence 456678999998754444432110 0000 00113455555532221 12235688999999999999999988764
No 48
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=93.63 E-value=0.14 Score=36.28 Aligned_cols=73 Identities=15% Similarity=0.074 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHhhc-CCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAIL-MDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY-~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.-- +..+...-..... ..-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 8 ~~RL~kEl~~l~~~~~~~~~~~~~~~~~d--~nl~~w~~~i~GP~~t----pyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 8 NFRLLEELEKGEKGFGPESCSYGLADSDD--ITMTKWNGTILGPPHS----NHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp HHHHHHHHHHHHC----CCEEEEESSTTC--TTCCEEEEEEECCSSS----TTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEeCCCCC--CcceEEEEEEECCCCC----CccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 346778999987632 2233221110000 0024566666532211 12234688999999999999999998874
No 49
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=93.57 E-value=0.054 Score=39.65 Aligned_cols=25 Identities=28% Similarity=0.596 Sum_probs=22.4
Q ss_pred eEEEEEEEecCCCCCCCCcceEecc
Q 031565 59 VELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 59 ~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
-.+.|.|.+|.+||..||.|.+...
T Consensus 85 yeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 85 YEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp EEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred eEEEEEEeCCccCCCCCCEeecccc
Confidence 4688999999999999999998774
No 50
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=93.55 E-value=0.14 Score=36.96 Aligned_cols=42 Identities=14% Similarity=0.190 Sum_probs=28.7
Q ss_pred ceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 38 QCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 38 ~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+.+.
T Consensus 29 ~~w~~~i~Gp~~t----pyegg~f~~~i~fp~~YP~~pP~v~f~t~ 70 (152)
T 2onu_A 29 QDFDVMFHGPNGT----AYEGGIWKVHVTLPDDYPFASPSIGFMNK 70 (152)
T ss_dssp EEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred ceEEEEEECCCCC----cccceEEEEEEcCcccCCCCCCeEEEecC
Confidence 4566666432211 12234688999999999999999988764
No 51
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=93.50 E-value=0.055 Score=40.19 Aligned_cols=24 Identities=25% Similarity=0.459 Sum_probs=21.3
Q ss_pred eEEEEEEEecCCCCCCCCcceEec
Q 031565 59 VELALIFSHTEKYPDEPPLLNVKS 82 (157)
Q Consensus 59 ~~l~L~~~~p~~YP~~~P~i~l~~ 82 (157)
-.+.|.|.||.+||.+||.+.+..
T Consensus 83 y~F~L~~~fPe~YP~~PPeV~F~~ 106 (172)
T 2z6o_A 83 YEFDIEFDIPITYPTTAPEIAVPE 106 (172)
T ss_dssp EEEEEEEECCTTTTTSCCCCBCGG
T ss_pred eEEEEEEECCCCCCCCCCeeeeCC
Confidence 368899999999999999999855
No 52
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=93.49 E-value=0.15 Score=37.14 Aligned_cols=73 Identities=14% Similarity=0.107 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhhcC-CceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILM-DEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~-d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.--+ ..+...-..... ..-..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+...
T Consensus 23 ~~RL~kEl~~l~~~~~~~~i~~~~~~~~d--~nl~~W~~~I~GP~~T----pYegG~f~l~i~fp~~YP~~PP~v~F~t~ 96 (156)
T 2q0v_A 23 SFRLLDELERGQKGNVSEGVSFGLESADD--ITLSNWSCTIFGQPGT----VFENRIYSLTIFCDDNYPDSPPTVKFDTK 96 (156)
T ss_dssp HHHHHHHHHHHHCC-CCTTEEEEESSTTC--TTCCEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEECCCcc--ccceeeEEEEECCCCC----CcCCcEEEEEEECCCcCCCCCCeEEEEcc
Confidence 4566788988886422 233221110000 0124566666532211 12234688999999999999999998875
No 53
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=93.36 E-value=0.49 Score=37.12 Aligned_cols=69 Identities=16% Similarity=0.141 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhh---cCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEe
Q 031565 5 VQEQEMEIEALEAI---LMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVK 81 (157)
Q Consensus 5 ~e~q~eEleAL~SI---Y~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~ 81 (157)
..+...|+..|+.= -+..+.+.... ..-..+.+.|.+..+. .-..-.+.+.|.||++||..||.+.+.
T Consensus 59 ~~RL~kEl~~l~~~~~~~~~gi~v~p~~-----dnl~~W~~~I~GP~~T----pYegG~f~l~i~fp~~YP~~PP~V~F~ 129 (253)
T 3e46_A 59 VQRIKREFKEVLKSEETSKNQIKVDLVD-----ENFTELRGEIAGPPDT----PYEGGRYQLEIKIPETYPFNPPKVRFI 129 (253)
T ss_dssp HHHHHHHHHHHHHCHHHHTTSEEEEECS-----TTSSEEEEEEECCTTS----TTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEEECC-----CcccEEEEEEECCCCC----CcCCCEEEEEEECCCCCCCCCCeeeec
Confidence 45667788888541 12222221110 0135666666532211 122346889999999999999999886
Q ss_pred c
Q 031565 82 S 82 (157)
Q Consensus 82 ~ 82 (157)
.
T Consensus 130 T 130 (253)
T 3e46_A 130 T 130 (253)
T ss_dssp S
T ss_pred C
Confidence 5
No 54
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=92.88 E-value=0.068 Score=40.07 Aligned_cols=24 Identities=29% Similarity=0.560 Sum_probs=21.2
Q ss_pred EEEEEEEecCCCCCCCCcceEecc
Q 031565 60 ELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 60 ~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
.+.|.+.||++||..||.+.+..+
T Consensus 90 ~f~l~i~fp~~YP~~PP~V~f~tp 113 (186)
T 1zuo_A 90 YILLNFSFKDNFPFDPPFVRVVLP 113 (186)
T ss_dssp SEEEEEECCTTTTSSCCEEEEEES
T ss_pred EEEEEEECCCCCCCCCCeEEEeCC
Confidence 577999999999999999988765
No 55
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=92.38 E-value=0.26 Score=36.30 Aligned_cols=66 Identities=17% Similarity=0.124 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.- + ..+..+ ..-..+.+.|.+..+. .-..-.+.+.+.||.+||..+|.+.+...
T Consensus 14 ~~RL~~El~~l~~~-~--~~v~~~------~~l~~w~~~I~GP~~t----pyegg~f~~~i~fp~~YP~~PP~v~F~t~ 79 (171)
T 1yf9_A 14 NRRREMDYMRLCNS-T--RKVYPS------DTVAEFWVEFKGPEGT----PYEDGTWMLHVQLPSDYPFKSPSIGFCNR 79 (171)
T ss_dssp CHHHHHHHHHHHSS-S--SCEEEC------SSTTEEEEEEECCTTS----TTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred HHHHHHHHHHHHhC-C--CCCCCC------CCceEEEEEEECCCCC----CccCceEEEEEEcCCCCCCCCCeEEeecC
Confidence 34566788888742 1 112111 1235666666532211 11234688999999999999999988763
No 56
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=92.34 E-value=0.23 Score=38.04 Aligned_cols=69 Identities=14% Similarity=0.159 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCC-ceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEec
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSN-QCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKS 82 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~-~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~ 82 (157)
..+...|+..|+.-=+..+....... .. ..+.+.+.+..+. .-..-.+.+.+.||++||..||.+.+..
T Consensus 4 ~~RL~kEl~~l~~~~~~gi~~~p~~~-----~~l~~w~~~I~GP~~T----pYegG~f~l~i~fP~~YP~~PP~V~F~T 73 (215)
T 1tte_A 4 AKRIMKEIQAVKDDPAAHITLEFVSE-----SDIHHLKGTFLGPPGT----PYEGGKFVVDIEVPMEYPFKPPKMQFDT 73 (215)
T ss_dssp HHHHHHHHHHHHTTTCTTCEECCCSS-----SSCCEEEEECCEEEEE----TTEEECCEEEEECCSCSSSCCCEEEETT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCC-----ccccccEEEEeCCCCC----CcCCCEEEEEEeCCccCCCCCCcccccC
Confidence 45667788888764333333321110 11 2556555421110 0112347789999999999999998765
No 57
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=92.07 E-value=0.72 Score=38.30 Aligned_cols=70 Identities=16% Similarity=0.177 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+.==+..+...... .....+.+.+.+..+. .-..-...+.+.||++||..||.+.+.+.
T Consensus 5 ~~RL~kEl~~l~~~~~~~~~~~p~~-----~nl~~w~~~i~Gp~~t----pyegg~f~~~i~fp~~YP~~pP~v~f~t~ 74 (399)
T 4ddg_A 5 LKRIHKELNDLARDPPAQCSAGPVG-----DDMFHWQATIMGPNDS----PYQGGVFFLTIHFPTDYPFKPPKVAFTTR 74 (399)
T ss_dssp HHHHHHHHHHHHHSCCSSEEEEEET-----TEEEEEEEEEECCTTS----SSTTCEEEEEEECCSSTTTSCCEEEESSC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEcC-----CcceEEEEEEECCCCC----CCCCCEEEEEEECCcccCCCCcEEEeecc
Confidence 4566788888886433333321110 0124556666532211 12235688999999999999999987763
No 58
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=91.67 E-value=0.11 Score=38.62 Aligned_cols=68 Identities=15% Similarity=0.299 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHhhcCCceeecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 5 VQEQEMEIEALEAILMDEFKEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+...|+..|+. +..+.+.-+.. .+-..+.+.+.|.+.. -..-.+.+.+.||++||..||.+.+...
T Consensus 28 ~~RL~kEl~~l~~--~~~i~~~~p~~----~nl~~W~~~igP~~tp-----Yegg~f~~~i~fp~~YP~~PP~v~F~t~ 95 (180)
T 2nvu_C 28 QLRIQKDINELNL--PKTCDISFSDP----DDLLNFKLVICPDEGF-----YKSGKFVFSFKVGQGYPHDPPKVKCETM 95 (180)
T ss_dssp HHHHHHHHHTCCC--CTTEEEECSST----TCTTEEEEEECCCSGG-----GTTBCEEEEEECCTTTTTSCCEEEECSC
T ss_pred HHHHHHHHHhcCC--CCCeEEEeccc----ccccceEEEECCCCCC-----CCCCEEEEEEeCCCcCCCCCCcCceecc
Confidence 3455677777731 22333220110 0124566666443321 1224578899999999999999988764
No 59
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=90.51 E-value=0.27 Score=36.28 Aligned_cols=71 Identities=13% Similarity=0.069 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHhhcCCc-eeec--ccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEe
Q 031565 5 VQEQEMEIEALEAILMDE-FKEI--HSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVK 81 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~-~~~~--~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~ 81 (157)
..+...|+..|+.=-++. +... +++. ..-..+.+.|.+..+. .-..-.+.+.+.||.+||..+|.+.+.
T Consensus 37 ~~RL~kEl~~l~~~~~~g~~~~~~~~~~d----~nl~~W~~~I~GP~~T----pYegG~f~l~i~fp~~YP~~PP~v~F~ 108 (170)
T 2hlw_A 37 NFRLLEELEEGQKGVGDGTVSWGLEDDED----MTLTRWTGMIIGPPRT----IYENRIYSLKIECGPKYPEAPPFVRFV 108 (170)
T ss_dssp HHHHHHHHHHHHHCCGGGCEEEEESSTTC----SSCCBEEEEECCCSSS----TTSSCCBCEEEECCSSCTTSCCEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEecCccc----ccceeeEEEEeCCCCC----CcCCcEEEEEEECCCCCCCCCCeeEEe
Confidence 456678898887633333 2221 1110 0023566666532211 111234678899999999999999887
Q ss_pred cc
Q 031565 82 SL 83 (157)
Q Consensus 82 ~~ 83 (157)
..
T Consensus 109 T~ 110 (170)
T 2hlw_A 109 TK 110 (170)
T ss_dssp BC
T ss_pred cc
Confidence 64
No 60
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=89.45 E-value=0.57 Score=38.10 Aligned_cols=69 Identities=16% Similarity=0.208 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhhcCCce-----eecccCccCCCCCCceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcce
Q 031565 5 VQEQEMEIEALEAILMDEF-----KEIHSGESGLNTSNQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLN 79 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d~~-----~~~~~~~~~~~~~~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~ 79 (157)
..+...|+..|+.=-+..+ ....+. .-..+.+.|.+..+. .-..-.+.|.|.||.+||..||.|.
T Consensus 78 ~kRL~kEl~~L~k~~p~g~~~~i~v~~~ed------nl~~w~~~I~GP~~T----pYegG~F~l~I~fP~dYP~~PP~V~ 147 (323)
T 3ceg_A 78 ARRLAQEAVTLSTSLPLSSSSSVFVRCDEE------RLDIMKVLITGPADT----PYANGCFEFDVYFPQDYPSSPPLVN 147 (323)
T ss_dssp HHHHHHHHHHHHHHCCCCSSCCEEEEEESS------CTTEEEEEEEBCTTS----TTBTCEEEEEEECCTTTTTSCCEEE
T ss_pred HHHHHHHHHHHHhCCCCCcccceeecccCC------CccccEEEEeCCCCC----CcCCCEEEEEEeCCCCCCCCCCeEE
Confidence 3456678888875333221 111110 124555555422111 1123468899999999999999998
Q ss_pred Eecc
Q 031565 80 VKSL 83 (157)
Q Consensus 80 l~~~ 83 (157)
+...
T Consensus 148 F~T~ 151 (323)
T 3ceg_A 148 LETT 151 (323)
T ss_dssp ECCS
T ss_pred Eecc
Confidence 8764
No 61
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=83.50 E-value=0.83 Score=33.47 Aligned_cols=24 Identities=21% Similarity=0.538 Sum_probs=20.6
Q ss_pred eEEEEEEEecCCCCCCCCcceEec
Q 031565 59 VELALIFSHTEKYPDEPPLLNVKS 82 (157)
Q Consensus 59 ~~l~L~~~~p~~YP~~~P~i~l~~ 82 (157)
-.+-+.+.+|.+||..+|.+.+..
T Consensus 81 Yn~pi~IwlP~~YP~~PP~v~v~p 104 (162)
T 3r3q_A 81 HSIPVIMWVPSMYPVKPPFISINL 104 (162)
T ss_dssp CEEEEEEECCTTTTTSCCEEEECG
T ss_pred ccccEEEEeCcccCCCCCEEEEEC
Confidence 347788999999999999998864
No 62
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=82.44 E-value=1.9 Score=25.10 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=29.9
Q ss_pred CCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 75 PPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 75 ~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
.|.+.+....|.+.+++..|.+.|.+...+.+|-|
T Consensus 3 MP~i~i~~~~g~s~e~k~~l~~~l~~~l~~~lg~p 37 (63)
T 2x4k_A 3 MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGAN 37 (63)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 68888887788999999999999998887777755
No 63
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=82.31 E-value=1.9 Score=25.49 Aligned_cols=35 Identities=29% Similarity=0.287 Sum_probs=29.3
Q ss_pred CCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 75 PPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 75 ~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
.|.|.+....+.+.+++..|.+.|.+...+.+|-+
T Consensus 1 MP~i~i~~~~g~s~eqk~~l~~~lt~~l~~~lg~~ 35 (64)
T 3abf_A 1 MVVLKVTLLEGRPPEKKRELVRRLTEMASRLLGEP 35 (64)
T ss_dssp CEEEEEEEETTCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 47788887778999999999999999888877754
No 64
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=82.27 E-value=1 Score=32.45 Aligned_cols=24 Identities=25% Similarity=0.512 Sum_probs=20.2
Q ss_pred eEEEEEEEecCCCCCCCCcceEec
Q 031565 59 VELALIFSHTEKYPDEPPLLNVKS 82 (157)
Q Consensus 59 ~~l~L~~~~p~~YP~~~P~i~l~~ 82 (157)
..+-+.+.+|.+||..+|.+.+..
T Consensus 69 y~iPi~Iwlp~~YP~~pP~vfv~p 92 (146)
T 3obq_A 69 YNIPICLWLLDTYPYNPPICFVKP 92 (146)
T ss_dssp EEEEEEEECCTTTTTSCCEEEECC
T ss_pred ccceEEEEeCccCCCCCCEEEEeC
Confidence 446678899999999999998865
No 65
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=81.65 E-value=2 Score=25.66 Aligned_cols=33 Identities=30% Similarity=0.433 Sum_probs=28.2
Q ss_pred CcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 76 PLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 76 P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
|.|.+.. .|.+.+++..|.+.|.+...+.+|.+
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~~~~~lg~~ 33 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSVAAEIYGMD 33 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 7788887 89999999999999998888777654
No 66
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=80.39 E-value=2.1 Score=25.00 Aligned_cols=34 Identities=29% Similarity=0.431 Sum_probs=28.0
Q ss_pred CcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 76 PLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 76 P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
|.+.+....|.+.+++..|.+.|.+...+.+|-+
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~~lg~~ 34 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKETTGAS 34 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 6677776678899999999999998888777654
No 67
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=79.86 E-value=2.2 Score=24.94 Aligned_cols=34 Identities=12% Similarity=0.265 Sum_probs=27.9
Q ss_pred CcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 76 PLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 76 P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
|.+.+....|.+.+++..|.+.|.+...+.+|-+
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~~lg~p 34 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMANSLDAP 34 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 6677776678899999999999998887777654
No 68
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=78.49 E-value=2.1 Score=26.28 Aligned_cols=35 Identities=20% Similarity=0.235 Sum_probs=29.6
Q ss_pred CCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 75 PPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 75 ~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
.|.|.+.-..|.+.+++..|.+.|.+...+.+|-+
T Consensus 1 MP~I~I~~~~grs~eqK~~L~~~it~~l~~~lg~p 35 (72)
T 3mb2_A 1 MLLLRITMLEGRSTEQKAELARALSAAAAAAFDVP 35 (72)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 47788877789999999999999999888777755
No 69
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=78.24 E-value=2.6 Score=25.23 Aligned_cols=34 Identities=35% Similarity=0.529 Sum_probs=28.2
Q ss_pred CcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 76 PLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 76 P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
|.|.+.-..|.+.+++..|.+.|.+...+.+|-+
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~~lg~p 34 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHETLGTP 34 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 6677776678999999999999999888777654
No 70
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=75.42 E-value=3.4 Score=24.90 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=28.2
Q ss_pred CcceEeccC---CCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 76 PLLNVKSLR---GIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 76 P~i~l~~~~---~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
|.|.+.-.. |.+.+++..|.+.|.+...+.+|-+
T Consensus 1 P~i~I~~~~~~~grs~eqK~~l~~~lt~~l~~~lg~p 37 (67)
T 3m21_A 1 PFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKN 37 (67)
T ss_dssp CEEEEEECCBTTBSCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHCcC
Confidence 667777766 8999999999999998888777754
No 71
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=74.35 E-value=3.6 Score=25.65 Aligned_cols=35 Identities=20% Similarity=0.218 Sum_probs=29.3
Q ss_pred CCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 75 PPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 75 ~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
.|.|.+.-..|.+.+++..|.+.+.+...+.+|-+
T Consensus 1 MP~I~I~~~~Grs~eqK~~L~~~it~~l~~~lg~p 35 (76)
T 3ej9_A 1 MPMISCDMRYGRTDEQKRALSAGLLRVISEATGEP 35 (76)
T ss_dssp -CEEEEEEETTCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHCcC
Confidence 48888887789999999999999999888777754
No 72
>3qc5_X Platelet binding protein GSPB; carbohydrate/sugar binding, sugar binding protein; HET: GOL; 1.40A {Streptococcus gordonii} PDB: 3qc6_X 4i8e_X* 3qd1_X*
Probab=69.78 E-value=10 Score=31.00 Aligned_cols=40 Identities=15% Similarity=0.267 Sum_probs=34.6
Q ss_pred eEEEEEEEecCCCCCCCCcceEeccCCCCHHhHHHHHHHHHH
Q 031565 59 VELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQ 100 (157)
Q Consensus 59 ~~l~L~~~~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~ 100 (157)
-.+.|.++|++.+|. +.+.+..+..|++.+++++++.+.+
T Consensus 270 G~fklviKy~P~vP~--~KV~V~DPnnLTd~EKekVkeaVKk 309 (360)
T 3qc5_X 270 GQFKLIIRFRIKTPE--NTVFVNNPNQLTEVEKNLVREAVKK 309 (360)
T ss_dssp TEEEEEEECCCCCCS--SCEEESCTTSCCHHHHHHHHHHHHH
T ss_pred ccEEEEEecCCCCCC--cceEecCcccCCHHHHHHHHHHHHH
Confidence 467788889999996 6778888899999999999999885
No 73
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=68.14 E-value=34 Score=25.37 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=26.4
Q ss_pred ceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEecc
Q 031565 38 QCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSL 83 (157)
Q Consensus 38 ~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~ 83 (157)
..+++++....+ -.-.|.++++.+||.++|.+...-+
T Consensus 26 ~~i~l~~~D~~g---------R~H~l~v~l~~~yp~~~P~~~~DlP 62 (186)
T 3zqs_A 26 STIKLKAEDASG---------REHLITLKLKAKYPAESPDYFVDFP 62 (186)
T ss_dssp SEEEEEEECTTS---------CEEEEEEECCTTTTTSCCEEECCCS
T ss_pred cEEEEEEEeCCC---------CeEEEEEEECCCCCCCCCeeEEcCC
Confidence 577777765433 2345889999999999997765543
No 74
>3ej9_B Beta-subunit of trans-3-chloroacrylic acid dehalo; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej7_B 3ej3_B 1s0y_B
Probab=61.78 E-value=10 Score=23.75 Aligned_cols=34 Identities=12% Similarity=0.299 Sum_probs=28.1
Q ss_pred CcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 76 PLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 76 P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
|.+.+.-..|.+.+++..|.+.+.+..-+.+|.+
T Consensus 1 Pi~qi~i~EGRT~EQK~~lI~~VT~a~~eslgap 34 (70)
T 3ej9_B 1 PFIECHIATGLSVARKQQLIRDVIDVTNKSIGSD 34 (70)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CeeEEEEecCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 5666666689999999999999998887777765
No 75
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=58.86 E-value=13 Score=22.82 Aligned_cols=34 Identities=12% Similarity=0.246 Sum_probs=26.7
Q ss_pred CcceEeccCC-CCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 76 PLLNVKSLRG-IQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 76 P~i~l~~~~~-L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
|.|.+.-..| ++.+++..|.+.|.+...+.+|-+
T Consensus 1 P~I~I~l~~Grls~eqk~~L~~~l~~~l~~~lgip 35 (76)
T 1gyx_A 1 PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSK 35 (76)
T ss_dssp CEEEEEESCCCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 6677765566 499999999999998888776643
No 76
>3mlc_A FG41 malonate semialdehyde decarboxylase; tautomerase superfamily, malonate semialdehyde decarboxylase alpha-beta-motif; 2.22A {Coryneform bacterium} SCOP: d.80.1.0 PDB: 3mjz_A
Probab=54.43 E-value=23 Score=24.49 Aligned_cols=44 Identities=9% Similarity=0.097 Sum_probs=32.6
Q ss_pred EEecCCC---CC--CCCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 65 FSHTEKY---PD--EPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 65 ~~~p~~Y---P~--~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
+.+++.| +. ..+.|.+....|-+.+++..|.+.|.+.. +.+|-+
T Consensus 50 ~~~~~~ylg~~rs~~~v~I~I~~~~gRt~EqK~~L~~~it~~l-~~lg~~ 98 (136)
T 3mlc_A 50 IIAEDAGLGFQRSPSVVIIHVFTQAGRTIETKQRVFAAITESL-APIGVA 98 (136)
T ss_dssp EEECCTTSSCCCCSCCEEEEEEEETTCCHHHHHHHHHHHHHHH-TTTTCC
T ss_pred ccccccccCcCCCCCeEEEEEEECCCCCHHHHHHHHHHHHHHH-HHcCCC
Confidence 3556666 22 24677777667899999999999999988 877743
No 77
>2aal_A Malonate semialdehyde decarboxylase; tautomerase superfamily, beta-alpha-beta, homotrimeric, LYAS; 1.65A {Pseudomonas pavonaceae} SCOP: d.80.1.6 PDB: 2aag_A 2aaj_A
Probab=52.92 E-value=14 Score=25.06 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=27.7
Q ss_pred CCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 75 PPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 75 ~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
.|.+.+.-..+.++.++..|.+.+.+...+.+|-|
T Consensus 1 MP~i~I~~~~~~~~e~k~~l~~~i~~al~~~~g~p 35 (131)
T 2aal_A 1 XPLLKFDLFYGRTDAQIKSLLDAAHGAMVDAFGVP 35 (131)
T ss_dssp -CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 47888887788999999999999998877666544
No 78
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=42.04 E-value=19 Score=21.33 Aligned_cols=17 Identities=18% Similarity=0.364 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHhhcCC
Q 031565 5 VQEQEMEIEALEAILMD 21 (157)
Q Consensus 5 ~e~q~eEleAL~SIY~d 21 (157)
+.+.++.++.|+++||+
T Consensus 9 ~~e~~~~~~~L~~MFP~ 25 (54)
T 1p3q_Q 9 ENERKDTLNTLQNMFPD 25 (54)
T ss_dssp HHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHccc
Confidence 45677899999999997
No 79
>3mlc_A FG41 malonate semialdehyde decarboxylase; tautomerase superfamily, malonate semialdehyde decarboxylase alpha-beta-motif; 2.22A {Coryneform bacterium} SCOP: d.80.1.0 PDB: 3mjz_A
Probab=40.74 E-value=23 Score=24.52 Aligned_cols=34 Identities=12% Similarity=0.258 Sum_probs=26.8
Q ss_pred CcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 76 PLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 76 P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
|.+.+.-.+|.+.+++..|.+.+.+...+.+|.|
T Consensus 1 P~v~I~l~~Grs~e~k~~L~~~it~al~e~~~vP 34 (136)
T 3mlc_A 1 PLIRIDLTSDRSREQRRAIADAVHDALVEVLAIP 34 (136)
T ss_dssp CEEEEEEETTSCSHHHHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 6667766788999999999999988776666554
No 80
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=38.10 E-value=26 Score=31.17 Aligned_cols=28 Identities=25% Similarity=0.481 Sum_probs=23.2
Q ss_pred CceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCC
Q 031565 37 NQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPD 73 (157)
Q Consensus 37 ~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~ 73 (157)
|..++++|+|.. ...+.|+|+-+.+||-
T Consensus 85 Pq~~~~~Lr~g~---------~~~f~~~~~~~~~~pv 112 (690)
T 3fcs_B 85 PQRIALRLRPDD---------SKNFSIQVRQVEDYPV 112 (690)
T ss_dssp SCEEEEEECTTC---------EEEEEEEEECCBTCCE
T ss_pred CceEEEEeccCC---------cEEEEEEEeccCCCCc
Confidence 678888898853 4789999999999994
No 81
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=37.91 E-value=41 Score=23.16 Aligned_cols=38 Identities=11% Similarity=0.082 Sum_probs=30.2
Q ss_pred CCCCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCChh
Q 031565 73 DEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAM 110 (157)
Q Consensus 73 ~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~m 110 (157)
...|.+.+....+.++.+...|.+.+.+...+.+|-|-
T Consensus 20 ~~MP~i~i~tnv~~~~~~~~~l~~~ls~~la~~lgKPe 57 (135)
T 3t5s_A 20 GSMPCAIVTTNADFTKDQADAFCLDMGQVLAKETGKPV 57 (135)
T ss_dssp -CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCSCG
T ss_pred CCcceEEEEecCccchhccchhHHHHHHHHHHhhCCch
Confidence 34799999877788888889999999988777777653
No 82
>3c6v_A Probable tautomerase/dehalogenase AU4130; aspergillus fumigatus trimeric thermophilic probable tautomerase/dehalogenase; HET: MSE; 1.90A {Aspergillus fumigatus AF293}
Probab=37.30 E-value=45 Score=23.81 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=30.0
Q ss_pred CCcceEeccCC-CCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 75 PPLLNVKSLRG-IQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 75 ~P~i~l~~~~~-L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
.|.+.|.-.+| ++++++..|.+.+.+...+. |.|
T Consensus 22 MP~v~I~~~~G~~t~eqk~~L~~~It~alve~-g~P 56 (161)
T 3c6v_A 22 MPRWLIQHSPNTLTPEEKSHLAQQITQAYVGF-GLP 56 (161)
T ss_dssp CCEEEEEECTTSSCHHHHHHHHHHHHHHHHHT-TCC
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHHHHHHHHh-CcC
Confidence 89999876677 69999999999999988888 888
No 83
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=37.20 E-value=39 Score=22.60 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=27.6
Q ss_pred CcceEeccCCCCHHhHHHHHHHHHHHHHHhCCChhh
Q 031565 76 PLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMI 111 (157)
Q Consensus 76 P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~mI 111 (157)
|.+.+....++++.+...|.+.+.+...+.+|-|-=
T Consensus 1 P~i~i~tn~~~s~~~~~~l~~~l~~ala~~lgkPe~ 36 (125)
T 2wkb_A 1 PCCELITNISIPDDKAQNTLSEIEDAISNILGKPVA 36 (125)
T ss_dssp CEEEEEESCCCCHHHHHHHHHHHHHHHHHHHCSCCT
T ss_pred CEEEEEecCCCchhhHHHHHHHHHHHHHHHhCCCHH
Confidence 667777667888888999999998887777766543
No 84
>1mww_A Hypothetical protein HI1388.1; structural genomics, structure 2 function project, S2F, unknown function; HET: GLU; 2.08A {Haemophilus influenzae} SCOP: d.80.1.4
Probab=36.12 E-value=60 Score=21.63 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=28.5
Q ss_pred CCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 75 PPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 75 ~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
.|.|.+....|.+.+++..|.+.|.+...+.+|-+
T Consensus 59 ~~~i~i~~~~grt~eqK~~l~~~l~~~l~~~lg~~ 93 (128)
T 1mww_A 59 YTVIEINLMAGRMEGTKKRLIKMLFSELEYKLGIR 93 (128)
T ss_dssp CEEEEEEEETTCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred cEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 46777776678999999999999998888777643
No 85
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=34.32 E-value=54 Score=21.25 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=29.1
Q ss_pred CCCCCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCC
Q 031565 72 PDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGM 108 (157)
Q Consensus 72 P~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~ 108 (157)
++..+.+.+....|.+.++..++.+.|.+...+.+|-
T Consensus 53 ~~~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi 89 (113)
T 1hfo_A 53 TNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLGI 89 (113)
T ss_dssp CSSCEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 3445677777767899999999999999888877764
No 86
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=32.80 E-value=37 Score=22.22 Aligned_cols=37 Identities=27% Similarity=0.343 Sum_probs=28.2
Q ss_pred CCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCChhhH
Q 031565 75 PPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIY 112 (157)
Q Consensus 75 ~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~mIf 112 (157)
.|.+.+.-..++++. ...|.+.+.+...+.+|-|-=|
T Consensus 1 MP~i~i~~~~~~~~~-~~~l~~~~~~~l~~~lgkp~~~ 37 (115)
T 2xcz_A 1 MPLINIQASVPAVAD-ANSLLQELSSKLAELLGKPEKY 37 (115)
T ss_dssp -CEEEEEESSCCCTT-HHHHHHHHHHHHHHHHTCCGGG
T ss_pred CCEEEEEecCCCchh-HHHHHHHHHHHHHHHHCCChHH
Confidence 477787766778888 8899999998887777776543
No 87
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=32.12 E-value=36 Score=22.81 Aligned_cols=38 Identities=18% Similarity=0.332 Sum_probs=25.6
Q ss_pred CCCCCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 72 PDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 72 P~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
++..|.+.+....|.+.++..++.+.|.+...+.+|-+
T Consensus 54 ~dp~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lgi~ 91 (125)
T 2wkb_A 54 NEGYCFVRLTSIGGINRSNNSLLADKITKILSNHLSVK 91 (125)
T ss_dssp CSSCEEEEEECC-----CTHHHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 34457788887677899999999999998888777643
No 88
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=31.50 E-value=27 Score=30.98 Aligned_cols=51 Identities=22% Similarity=0.287 Sum_probs=32.0
Q ss_pred CceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEeccCCCCHHhHHHHHHHH
Q 031565 37 NQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKL 98 (157)
Q Consensus 37 ~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L 98 (157)
|..++|+|+|.. ...+.|+|+-+.+||-. .+.+....+=-..+++.|++..
T Consensus 78 Pq~~~~~Lr~g~---------~~~f~~~~~~~~~ypvD--ly~LmD~S~SM~ddi~~lk~l~ 128 (687)
T 3k6s_B 78 PQKVTLYLRPGQ---------AAAFNVTFRRAKGYPID--LYYLMDLSYSMLDDLRNVKKLG 128 (687)
T ss_dssp CSCBEEEECTTS---------CEEEEEEECCCCCCCCE--EEEEEECSSTTHHHHHTTTTCC
T ss_pred CcEEEEEEecCC---------eeEEEEEEeccCCCcee--EEEEEcCCcchHHHHHHHHHHH
Confidence 678999999853 47899999999999942 2333332332334444444433
No 89
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=31.42 E-value=65 Score=20.94 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=28.0
Q ss_pred CCCCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCC
Q 031565 73 DEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGM 108 (157)
Q Consensus 73 ~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~ 108 (157)
+..+.+.+....|.+.++..++.+.|.+...+.+|-
T Consensus 55 ~~~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi 90 (115)
T 1uiz_A 55 DPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLNI 90 (115)
T ss_dssp SSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 334566777767899999999999999888777764
No 90
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=31.23 E-value=74 Score=21.73 Aligned_cols=37 Identities=11% Similarity=0.065 Sum_probs=30.5
Q ss_pred CCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCChhh
Q 031565 75 PPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMI 111 (157)
Q Consensus 75 ~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~mI 111 (157)
.|.+.+....+.++.....|.+.+.+...+.+|-|-=
T Consensus 21 MP~i~i~tnv~~s~~~~~~l~~~ls~~la~~lgKPe~ 57 (133)
T 3fwu_A 21 MPVIQTFVSTPLDHHKRENLAQVYRAVTRDVLGKPED 57 (133)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHHHHTSCSCGG
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHCcCcc
Confidence 7999998877888888888999999888888877643
No 91
>2aal_A Malonate semialdehyde decarboxylase; tautomerase superfamily, beta-alpha-beta, homotrimeric, LYAS; 1.65A {Pseudomonas pavonaceae} SCOP: d.80.1.6 PDB: 2aag_A 2aaj_A
Probab=30.76 E-value=92 Score=20.78 Aligned_cols=32 Identities=19% Similarity=0.139 Sum_probs=26.2
Q ss_pred CcceEeccCCCCHHhHHHHHHHHHHHHHHhCCC
Q 031565 76 PLLNVKSLRGIQAGDLKILKEKLEQEASENLGM 108 (157)
Q Consensus 76 P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~ 108 (157)
+.|.+. ..|.+.+++.+|.+.|.+...+.+|-
T Consensus 67 ~~I~i~-~~grt~eqK~~l~~~l~~~l~~~lg~ 98 (131)
T 2aal_A 67 VLLTVI-SRPRSEEQKVCFYKLLTGALERDCGI 98 (131)
T ss_dssp EEEEEE-ESCCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEE-eCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 466777 67899999999999999888877664
No 92
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=30.69 E-value=73 Score=20.63 Aligned_cols=35 Identities=9% Similarity=0.068 Sum_probs=27.4
Q ss_pred CcceEeccCCCCHHhHHHHHHHHHHHHH-HhCCChhh
Q 031565 76 PLLNVKSLRGIQAGDLKILKEKLEQEAS-ENLGMAMI 111 (157)
Q Consensus 76 P~i~l~~~~~L~~~~~~~L~~~L~~~~~-e~~G~~mI 111 (157)
|.+.+....++++. ...|.+.+.+... +.+|-|-=
T Consensus 1 P~i~i~tn~~~~~~-~~~l~~~~~~~l~~~~~gkPe~ 36 (112)
T 3b64_A 1 PVIQTFVSTPLDHH-KRENLAQVYRAVTRDVLGKPED 36 (112)
T ss_dssp CEEEEEESSCCCHH-HHHHHHHHHHHHHHHTSCSCGG
T ss_pred CEEEEEecCCCchh-HHHHHHHHHHHHHHHHhCCCHH
Confidence 66777766678888 8899999998888 88887644
No 93
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=30.20 E-value=74 Score=26.96 Aligned_cols=57 Identities=19% Similarity=0.253 Sum_probs=36.3
Q ss_pred CceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEeccCCCCHHhHHHHHHHHHHHHHH
Q 031565 37 NQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASE 104 (157)
Q Consensus 37 ~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e 104 (157)
|..+.++|+|.. ...+.++|+-+.+||-.. +.+-...+=-..+++.|++....++++
T Consensus 85 Pq~v~l~LRpG~---------~~~f~v~~~~~~~ypvDL--y~LmDlS~SM~ddl~~lk~lg~~L~~~ 141 (472)
T 3t3p_B 85 PQRIALRLRPDD---------SKNFSIQVRQVEDYPVDI--YYLMDLSYSMKDDLWSIQNLGTKLATQ 141 (472)
T ss_dssp CCEEEEEECTTC---------EEEEEEEEECCSSCCEEE--EEEEECSGGGHHHHHHTTTHHHHHHHH
T ss_pred CcEEEEEecCCC---------cEEEEEEeecCCCCCceE--EEEEccCcchHHHHHHHHHHHHHHHHH
Confidence 678899999853 478999999999999532 233322222234556666655555543
No 94
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=28.33 E-value=86 Score=26.83 Aligned_cols=57 Identities=25% Similarity=0.304 Sum_probs=36.0
Q ss_pred CceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEeccCCCCHHhHHHHHHHHHHHHHH
Q 031565 37 NQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASE 104 (157)
Q Consensus 37 ~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e 104 (157)
|..++++|+|.. ...+.++|+-+.+||-.. +.+-...+=-..+++.|++....++++
T Consensus 106 PQ~v~l~LRpG~---------~~~f~v~~~~~~~yPVDL--yyLmDlS~SM~ddl~~lk~lg~~L~~~ 162 (503)
T 3v4v_B 106 PQRVRVTLRPGE---------PQQLQVRFLRAEGYPVDL--YYLMDLSYSMKDDLERVRQLGHALLVR 162 (503)
T ss_dssp CCEEEEECBTTB---------CEEEEEEEECCSSCCEEE--EEEEECSGGGHHHHHHHHHSSHHHHHH
T ss_pred CceEEEEecCCC---------cEEEEEEEEccCCCceeE--EEEEecCcchhhHHHHHHHHHHHHHHH
Confidence 678899998853 478999999999999743 233222222234555565555555443
No 95
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=27.82 E-value=65 Score=20.96 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=27.4
Q ss_pred CCCCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCC
Q 031565 73 DEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGM 108 (157)
Q Consensus 73 ~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~ 108 (157)
+..+.+.+....|.+.++..++.+.|.+...+.+|-
T Consensus 55 ~~~~~v~i~~~~g~t~eqk~~l~~~i~~~l~~~lgi 90 (115)
T 2xcz_A 55 EPTCYVEVKSIGALDGSRTQEVSELVCGHIEQNLGI 90 (115)
T ss_dssp SSCEEEEEEESSCCCTTHHHHHHHHHHHHHHHHHCC
T ss_pred CcEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 334566677666789999999999999888777764
No 96
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=27.31 E-value=74 Score=20.29 Aligned_cols=20 Identities=20% Similarity=0.248 Sum_probs=16.6
Q ss_pred CCCHHhHHHHHHHHHHHHHH
Q 031565 85 GIQAGDLKILKEKLEQEASE 104 (157)
Q Consensus 85 ~L~~~~~~~L~~~L~~~~~e 104 (157)
|.++.+++.+.+.|+++|++
T Consensus 54 g~~k~dKe~i~eiLqE~we~ 73 (81)
T 1ghh_A 54 GATKEDKQRISEILQETWES 73 (81)
T ss_dssp SCCHHHHHHHHHHHHHHHHT
T ss_pred CCChhHHHHHHHHHHHHHhC
Confidence 56677899999999999874
No 97
>3vi3_B Integrin beta-1; beta propeller fold, rossman fold, beta sandwich, fibronecti receptor, cell adhesion-immune system complex; HET: NAG BMA MAN; 2.90A {Homo sapiens} PDB: 3vi4_B*
Probab=26.96 E-value=1e+02 Score=25.94 Aligned_cols=57 Identities=23% Similarity=0.271 Sum_probs=36.0
Q ss_pred CceEEEEecCCCCCCCcCCCCCeEEEEEEEecCCCCCCCCcceEeccCCCCHHhHHHHHHHHHHHHHH
Q 031565 37 NQCFQVTLSPQDDEADESTMPPVELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASE 104 (157)
Q Consensus 37 ~~~f~I~l~~~~~~~~~~~~~~~~l~L~~~~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e 104 (157)
|..+.++|+|.. ...+.++|+-+.+||-.. +.+-...+=-..+++.|++....++++
T Consensus 96 PQ~v~l~LRpG~---------~~~f~v~~~~~~~yPVDL--yyLmDlS~SM~ddl~~lk~lg~~L~~~ 152 (454)
T 3vi3_B 96 PQQLVLRLRSGE---------PQTFTLKFKRAEDYPIDL--YYLMDLSYSMKDDLENVKSLGTDLMNE 152 (454)
T ss_dssp CCEEEEEECTTC---------CCCEEEEEECCSCCCEEE--EEEEECSGGGHHHHHHHTTHHHHHHHH
T ss_pred CceEEEEecCCC---------eEEEEEEEecCCCCceeE--EEEecCCcchhhHHHHHHHHHHHHHHH
Confidence 678889998854 367889999999999643 233322222234566666655555543
No 98
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=26.12 E-value=67 Score=21.94 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=28.2
Q ss_pred CCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCCh
Q 031565 75 PPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMA 109 (157)
Q Consensus 75 ~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~ 109 (157)
.|.+.+....++++++.+.|.+.+.+...+.+|-|
T Consensus 21 MP~i~i~tnv~~s~~~~~~l~~~ls~~la~~lgKP 55 (133)
T 3fwt_A 21 MPFLQTIVSVSLDDQKRANLSAAYGMICREELGKP 55 (133)
T ss_dssp EEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHSCT
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 68899887778888888989998888777666655
No 99
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=24.78 E-value=85 Score=20.28 Aligned_cols=36 Identities=14% Similarity=0.270 Sum_probs=27.9
Q ss_pred CCCCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCC
Q 031565 73 DEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGM 108 (157)
Q Consensus 73 ~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~ 108 (157)
+..+.+.+....|.+.++..++.+.|.+...+.+|-
T Consensus 55 ~~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi 90 (112)
T 3b64_A 55 DPVACVRVEALGGYGPSEPEKVTSIVTAAITKECGI 90 (112)
T ss_dssp SSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 434566777767789999999999999888777764
No 100
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=24.44 E-value=89 Score=20.32 Aligned_cols=35 Identities=14% Similarity=0.195 Sum_probs=25.6
Q ss_pred CcceEeccCCCCHHhHHHHHHHHHHHHHHhCCChh
Q 031565 76 PLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAM 110 (157)
Q Consensus 76 P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~~m 110 (157)
|.+.+...-.++..+.+.+.+.+.+...+.+|.|-
T Consensus 1 P~i~~~TNv~~~~~~~~~l~~~ls~~~a~~lgKPe 35 (114)
T 4dh4_A 1 PKCMIFCPVAATPAQQDALLKDAEKAVADALGKPL 35 (114)
T ss_dssp CEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred CEEEEEecCCCchhhHHHHHHHHHHHHHHHHCCCh
Confidence 56667664556677888899888888777777653
No 101
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=23.57 E-value=85 Score=20.57 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=27.1
Q ss_pred CCcceEeccCCCCHHhHHHHHHHHHHHHHHhCCC
Q 031565 75 PPLLNVKSLRGIQAGDLKILKEKLEQEASENLGM 108 (157)
Q Consensus 75 ~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~G~ 108 (157)
.+.+.+....|.+.++..++.+.|.+...+.+|-
T Consensus 57 ~~~i~I~~~~g~~~eqk~~l~~~i~~~l~~~lgi 90 (119)
T 2os5_A 57 VAVIKVESIGALSADDNIRHTQKITQFCQDTLKL 90 (119)
T ss_dssp CEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 3556777667899999999999999888777764
No 102
>1abz_A Alpha-T-alpha, ATA; de novo design, helix-turn-helix, peptide; HET: SIN; NMR {} SCOP: k.15.1.1
Probab=21.68 E-value=68 Score=17.11 Aligned_cols=15 Identities=40% Similarity=0.297 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHhhc
Q 031565 5 VQEQEMEIEALEAIL 19 (157)
Q Consensus 5 ~e~q~eEleAL~SIY 19 (157)
+...++|+.||++-=
T Consensus 5 karveqelqalearg 19 (40)
T 1abz_A 5 KARVEQELQALEARG 19 (40)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcC
Confidence 456788999998743
No 103
>2kw7_A Conserved domain protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Porphyromonas gingivalis}
Probab=21.24 E-value=1.6e+02 Score=20.30 Aligned_cols=42 Identities=7% Similarity=0.001 Sum_probs=31.5
Q ss_pred CCCCHHhHHHHHHHHHHHHHHhCCChhhH--------HHHHHHHHHHHHH
Q 031565 84 RGIQAGDLKILKEKLEQEASENLGMAMIY--------TLVTSAKEWLSER 125 (157)
Q Consensus 84 ~~L~~~~~~~L~~~L~~~~~e~~G~~mIf--------~lie~~qe~L~~~ 125 (157)
.-|+..+...|.+.|.+.-++..++..|. ++-+++.+....+
T Consensus 26 ~~Ls~~~~~~L~~~l~~~e~~t~~qi~Vv~v~~l~g~~~~~~A~~~f~~w 75 (157)
T 2kw7_A 26 GLLSNAQEEVMNGRLRAIRSSHAVEFAVVTLPSIGDAPLEDFTLKLARQW 75 (157)
T ss_dssp SCSCHHHHHHHHHHHHHHHHHTCCEEEEEEESBCTTCCHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHhhCCeEEEEEEcCCCCCCHHHHHHHHHHHh
Confidence 45899999999999998877666665554 4566777777655
Done!