Your job contains 1 sequence.
>031573
MAKKAANEPKESQSSSASNLKMVLRKRPTRHSVVAAVGIEKEGKSISAKRVTTKLKKKHE
KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI
ATEKRAEFDRAMADYIKRKENGKVENSEEDSEFDEYE
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031573
(157 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006135 - symbol:HMGB2 "high mobility group ... 205 1.4e-16 1
TAIR|locus:2128003 - symbol:HMGB5 "high mobility group B5... 194 2.0e-15 1
TAIR|locus:2053893 - symbol:HMGB4 "high mobility group B4... 192 3.3e-15 1
RGD|1589841 - symbol:LOC690940 "similar to High mobility ... 132 4.0e-12 2
RGD|1593466 - symbol:LOC689398 "similar to High mobility ... 132 4.0e-12 2
UNIPROTKB|P10103 - symbol:HMGB1 "High mobility group prot... 129 8.3e-12 2
UNIPROTKB|Q6YKA4 - symbol:HMGB1 "High mobility group prot... 129 8.3e-12 2
UNIPROTKB|P09429 - symbol:HMGB1 "High mobility group prot... 129 8.3e-12 2
UNIPROTKB|F2Z594 - symbol:HMGB1 "High mobility group prot... 129 8.3e-12 2
UNIPROTKB|P12682 - symbol:HMGB1 "High mobility group prot... 129 8.3e-12 2
RGD|1585821 - symbol:LOC680968 "similar to High mobility ... 129 9.5e-12 2
RGD|1586285 - symbol:LOC691220 "hypothetical protein LOC6... 129 1.0e-11 2
RGD|1588313 - symbol:LOC679451 "similar to High mobility ... 129 1.0e-11 2
RGD|1596979 - symbol:LOC678705 "hypothetical protein LOC6... 129 1.0e-11 2
RGD|1591683 - symbol:LOC681718 "similar to High mobility ... 129 1.1e-11 2
RGD|2802 - symbol:Hmgb1 "high mobility group box 1" speci... 129 1.1e-11 2
TAIR|locus:2154433 - symbol:HMGB6 "high-mobility group bo... 157 1.7e-11 1
UNIPROTKB|E1BMK2 - symbol:E1BMK2 "Uncharacterized protein... 126 2.0e-11 2
RGD|1588759 - symbol:Hmgb1-ps3 "high mobility group box 1... 125 3.0e-11 2
RGD|1587112 - symbol:Hmg1l1 "high-mobility group (nonhist... 126 5.3e-11 2
UNIPROTKB|F1NPU8 - symbol:HMGB2 "High mobility group prot... 126 5.7e-11 2
UNIPROTKB|P26584 - symbol:HMGB2 "High mobility group prot... 126 5.7e-11 2
UNIPROTKB|F1N927 - symbol:HMGB1 "High mobility group prot... 122 7.9e-11 2
UNIPROTKB|Q9YH06 - symbol:HMG1 "High mobility group 1 pro... 122 8.3e-11 2
RGD|1589528 - symbol:LOC679344 "similar to High mobility ... 121 1.1e-10 2
RGD|1592627 - symbol:LOC685520 "similar to High mobility ... 121 1.1e-10 2
UNIPROTKB|P40618 - symbol:HMGB3 "High mobility group prot... 141 8.4e-10 1
MGI|MGI:1098219 - symbol:Hmgb3 "high mobility group box 3... 139 1.4e-09 1
RGD|1564407 - symbol:Hmgb3 "high mobility group box 3" sp... 139 1.4e-09 1
UNIPROTKB|B2RPK0 - symbol:HMGB1P1 "Putative high mobility... 112 1.6e-09 2
UNIPROTKB|Q32L31 - symbol:HMGB3 "High mobility group prot... 138 1.8e-09 1
UNIPROTKB|J9NVS3 - symbol:HMGB3 "Uncharacterized protein"... 137 2.2e-09 1
UNIPROTKB|F1RQ19 - symbol:LOC100517745 "Uncharacterized p... 137 2.2e-09 1
UNIPROTKB|P36194 - symbol:HMGB1 "High mobility group prot... 137 2.2e-09 1
UNIPROTKB|E1BIU3 - symbol:LOC532409 "Uncharacterized prot... 136 2.9e-09 1
RGD|1561694 - symbol:RGD1561694 "similar to High mobility... 136 2.9e-09 1
UNIPROTKB|E7EQU1 - symbol:HMGB3 "High mobility group prot... 135 3.6e-09 1
UNIPROTKB|O15347 - symbol:HMGB3 "High mobility group prot... 135 3.6e-09 1
ZFIN|ZDB-GENE-050417-290 - symbol:hmgb3b "high-mobility g... 135 3.6e-09 1
MGI|MGI:96157 - symbol:Hmgb2 "high mobility group box 2" ... 133 5.9e-09 1
UNIPROTKB|E7ES08 - symbol:HMGB3 "High mobility group prot... 133 5.9e-09 1
RGD|1564519 - symbol:RGD1564519 "similar to High mobility... 133 5.9e-09 1
RGD|69291 - symbol:Hmgb2 "high mobility group box 2" spec... 133 5.9e-09 1
UNIPROTKB|E9PES6 - symbol:HMGB3 "High mobility group prot... 133 5.9e-09 1
UNIPROTKB|E1BIF8 - symbol:E1BIF8 "Uncharacterized protein... 112 7.1e-09 2
UNIPROTKB|E2QY30 - symbol:HMGB2 "Uncharacterized protein"... 132 7.6e-09 1
UNIPROTKB|P17741 - symbol:HMGB2 "High mobility group prot... 132 7.6e-09 1
UNIPROTKB|P40673 - symbol:HMGB2 "High mobility group prot... 132 7.6e-09 1
UNIPROTKB|P26583 - symbol:HMGB2 "High mobility group prot... 132 7.6e-09 1
RGD|1559962 - symbol:RGD1559962 "similar to High mobility... 132 7.6e-09 1
UNIPROTKB|D6R9A6 - symbol:HMGB2 "High mobility group prot... 132 7.6e-09 1
ZFIN|ZDB-GENE-030131-341 - symbol:hmgb1a "high-mobility g... 131 9.7e-09 1
UNIPROTKB|D4A9T3 - symbol:D4A9T3 "Uncharacterized protein... 129 1.6e-08 1
UNIPROTKB|J9P699 - symbol:HMGB1 "High mobility group prot... 129 1.6e-08 1
UNIPROTKB|Q5T7C4 - symbol:HMGB1 "High mobility group prot... 129 1.6e-08 1
UNIPROTKB|Q5T7C6 - symbol:HMGB1 "High mobility group prot... 129 1.6e-08 1
UNIPROTKB|Q5T7C0 - symbol:HMGB1 "High mobility group prot... 129 1.6e-08 1
UNIPROTKB|Q8WW32 - symbol:HMGB4 "High mobility group prot... 129 1.6e-08 1
UNIPROTKB|D4A2L7 - symbol:D4A2L7 "Uncharacterized protein... 128 2.0e-08 1
ZFIN|ZDB-GENE-030131-8480 - symbol:hmgb1b "high-mobility ... 128 2.0e-08 1
RGD|2319567 - symbol:LOC100361707 "Ac2-008-like" species:... 129 2.1e-08 1
UNIPROTKB|F1MF42 - symbol:LOC618297 "Uncharacterized prot... 116 2.6e-08 2
MGI|MGI:1916567 - symbol:Hmgb4 "high-mobility group box 4... 127 2.6e-08 1
ASPGD|ASPL0000037691 - symbol:AN2885 species:162425 "Emer... 126 3.3e-08 1
UNIPROTKB|P0C6E5 - symbol:P0C6E5 "Putative high mobility ... 125 4.2e-08 1
RGD|1594733 - symbol:LOC690521 "similar to High mobility ... 124 7.1e-08 1
UNIPROTKB|Q32L34 - symbol:HMGB4 "High mobility group prot... 122 8.7e-08 1
UNIPROTKB|F1LZ54 - symbol:F1LZ54 "Uncharacterized protein... 121 1.1e-07 1
RGD|1563668 - symbol:RGD1563668 "similar to High mobility... 122 1.2e-07 1
SGD|S000004676 - symbol:ABF2 "Mitochondrial DNA-binding p... 120 1.4e-07 1
CGD|CAF0007020 - symbol:NHP6A species:5476 "Candida albic... 119 1.8e-07 1
UNIPROTKB|Q9UVL1 - symbol:NHP6 "Non-histone chromosomal p... 119 1.8e-07 1
UNIPROTKB|P07156 - symbol:HMGB1 "High mobility group prot... 118 2.3e-07 1
UNIPROTKB|F1M1H9 - symbol:F1M1H9 "Uncharacterized protein... 118 2.3e-07 1
TAIR|locus:2128504 - symbol:3xHMG-box2 "3xHigh Mobility G... 125 3.6e-07 1
DICTYBASE|DDB_G0270260 - symbol:nhp6 "HMG1/2 (high mobili... 114 6.1e-07 1
RGD|2319002 - symbol:LOC100365478 "high-mobility group bo... 114 6.1e-07 1
UNIPROTKB|F1N1P2 - symbol:F1N1P2 "Uncharacterized protein... 115 6.2e-07 1
POMBASE|SPBC28F2.11 - symbol:SPBC28F2.11 "HMG box protein... 120 6.3e-07 1
RGD|1583212 - symbol:LOC685091 "similar to High mobility ... 114 8.8e-07 1
FB|FBgn0011764 - symbol:Dsp1 "Dorsal switch protein 1" sp... 120 9.8e-07 1
ZFIN|ZDB-GENE-041008-209 - symbol:ssrp1b "structure speci... 123 1.1e-06 1
UNIPROTKB|J9NYX4 - symbol:SSRP1 "Uncharacterized protein"... 120 1.7e-06 1
UNIPROTKB|F6QYV9 - symbol:SSRP1 "Uncharacterized protein"... 121 1.8e-06 1
UNIPROTKB|I3LLA8 - symbol:SSRP1 "Uncharacterized protein"... 121 1.8e-06 1
RGD|1560584 - symbol:RGD1560584 "similar to High mobility... 110 2.6e-06 1
SGD|S000006256 - symbol:NHP6A "High-mobility group (HMG) ... 108 2.6e-06 1
UNIPROTKB|B6ZLK1 - symbol:SSRP1 "Structure-specific recog... 119 3.0e-06 1
UNIPROTKB|Q04678 - symbol:SSRP1 "FACT complex subunit SSR... 119 3.0e-06 1
TAIR|locus:2136103 - symbol:3xHMG-box1 "3xHigh Mobility G... 116 3.3e-06 1
MGI|MGI:107912 - symbol:Ssrp1 "structure specific recogni... 118 3.8e-06 1
UNIPROTKB|Q08945 - symbol:SSRP1 "FACT complex subunit SSR... 118 3.8e-06 1
RGD|621143 - symbol:Ssrp1 "structure specific recognition... 118 3.8e-06 1
UNIPROTKB|Q04931 - symbol:Ssrp1 "FACT complex subunit SSR... 118 3.8e-06 1
POMBASE|SPAC57A10.09c - symbol:nhp6 "High-mobility group ... 106 4.3e-06 1
ZFIN|ZDB-GENE-031118-9 - symbol:ssrp1a "structure specifi... 115 7.9e-06 1
SGD|S000002157 - symbol:NHP6B "High-mobility group (HMG) ... 103 9.0e-06 1
UNIPROTKB|F1Q2J2 - symbol:SSRP1 "Uncharacterized protein"... 114 1.0e-05 1
FB|FBgn0010278 - symbol:Ssrp "Structure specific recognit... 114 1.0e-05 1
FB|FBgn0038978 - symbol:CG7045 species:7227 "Drosophila m... 102 1.1e-05 1
WARNING: Descriptions of 67 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:505006135 [details] [associations]
symbol:HMGB2 "high mobility group B2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0000785 "chromatin" evidence=TAS]
[GO:0003682 "chromatin binding" evidence=TAS] [GO:0006333
"chromatin assembly or disassembly" evidence=RCA;TAS] [GO:0030527
"structural constituent of chromatin" evidence=TAS] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0046686 "response to
cadmium ion" evidence=RCA] [GO:0003677 "DNA binding"
evidence=ISS;IDA] InterPro:IPR009071 Pfam:PF00505 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0000785 EMBL:AC069251 GO:GO:0003700 GO:GO:0003682
eggNOG:COG5648 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006333 HSSP:P07155 EMBL:Y14072 EMBL:AF370248
EMBL:AY063064 EMBL:AK118543 EMBL:AB493468 EMBL:AY084731
IPI:IPI00532636 IPI:IPI00657279 IPI:IPI00846437 PIR:F86339
PIR:T51597 RefSeq:NP_001031074.1 RefSeq:NP_001077569.1
RefSeq:NP_564123.1 UniGene:At.21298 ProteinModelPortal:O49596
SMR:O49596 STRING:O49596 PaxDb:O49596 PRIDE:O49596
EnsemblPlants:AT1G20693.1 GeneID:838658 KEGG:ath:AT1G20693
TAIR:At1g20693 HOGENOM:HOG000197860 InParanoid:O49596 OMA:YVAKANK
PhylomeDB:O49596 ProtClustDB:CLSN2687884 Genevestigator:O49596
GO:GO:0030527 Uniprot:O49596
Length = 144
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 36/89 (40%), Positives = 58/89 (65%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +AFF F+EDFR+ F+++NP KS+ +GKA G+KWK+++ EK Y A +++
Sbjct: 38 PKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKV 97
Query: 127 EFDRAMADYIKRKENGKVENSEEDSEFDE 155
E+++ + Y K+ E G E+ E D E
Sbjct: 98 EYEKNIKAYNKKLEEGPKEDEESDKSVSE 126
>TAIR|locus:2128003 [details] [associations]
symbol:HMGB5 "high mobility group B5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0000785 "chromatin" evidence=TAS]
[GO:0003682 "chromatin binding" evidence=TAS] [GO:0006333
"chromatin assembly or disassembly" evidence=RCA;TAS] [GO:0030527
"structural constituent of chromatin" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISS;IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0000785 GO:GO:0003700 GO:GO:0003682 eggNOG:COG5648
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006333 EMBL:AL161587 EMBL:AL031135 HOGENOM:HOG000197860
GO:GO:0030527 HSSP:P11632 EMBL:Y14075 EMBL:AK317173 EMBL:BT025597
EMBL:AY085615 IPI:IPI00535971 PIR:T04662 RefSeq:NP_195282.1
UniGene:At.482 ProteinModelPortal:O49597 SMR:O49597 STRING:O49597
PaxDb:O49597 PRIDE:O49597 EnsemblPlants:AT4G35570.1 GeneID:829709
KEGG:ath:AT4G35570 TAIR:At4g35570 InParanoid:O49597 OMA:YNMELAN
PhylomeDB:O49597 ProtClustDB:CLSN2916185 Genevestigator:O49597
Uniprot:O49597
Length = 125
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 39/87 (44%), Positives = 51/87 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PKKPP+ FF FL+DFRK F NPD KS+ +G+A G+KWKTMT EE+ + + K+
Sbjct: 34 PKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERAPFVAKSQSKKT 93
Query: 127 EFDRAMADYIKRKENG-KVENSEEDSE 152
E+ M Y NG K +E E
Sbjct: 94 EYAVTMQQYNMELANGNKTTGDDEKQE 120
>TAIR|locus:2053893 [details] [associations]
symbol:HMGB4 "high mobility group B4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0000785 "chromatin" evidence=TAS]
[GO:0003682 "chromatin binding" evidence=TAS] [GO:0006333
"chromatin assembly or disassembly" evidence=RCA;TAS] [GO:0030527
"structural constituent of chromatin" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0003677 "DNA binding"
evidence=ISS;IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0000785 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006333 EMBL:AC007584 HOGENOM:HOG000197860 GO:GO:0030527
eggNOG:NOG320947 EMBL:Y14074 EMBL:F20020 EMBL:AF370150
EMBL:AF370562 EMBL:AY150467 EMBL:AK317044 EMBL:AY086336
IPI:IPI00516334 IPI:IPI00656969 PIR:F84553 PIR:T51596
RefSeq:NP_001031364.2 RefSeq:NP_001077909.1 RefSeq:NP_179347.1
UniGene:At.481 HSSP:P11632 ProteinModelPortal:Q42344 SMR:Q42344
STRING:Q42344 PaxDb:Q42344 PRIDE:Q42344 EnsemblPlants:AT2G17560.1
EnsemblPlants:AT2G17560.2 GeneID:816263 KEGG:ath:AT2G17560
TAIR:At2g17560 InParanoid:Q42344 OMA:LANPNNK PhylomeDB:Q42344
ProtClustDB:CLSN2683898 Genevestigator:Q42344 Uniprot:Q42344
Length = 138
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 38/91 (41%), Positives = 55/91 (60%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF FLEDFRK F NP+ KS+ +GKA G +WK MT E+K Y A ++
Sbjct: 35 PKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKT 94
Query: 127 EFDRAMADYIKRKENGKVENSEEDSEFDEYE 157
E+ + + Y + +G E+DS+ + E
Sbjct: 95 EYIKNVQQYNLKLASG-TNREEDDSDKSKSE 124
>RGD|1589841 [details] [associations]
symbol:LOC690940 "similar to High mobility group protein 1
(HMG-1) (High mobility group protein B1) (Amphoterin)
(Heparin-binding protein p30)" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] REFSEQ:XM_001076232 Ncbi:XP_001076232
Length = 214
Score = 132 (51.5 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 27/81 (33%), Positives = 48/81 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEVSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 116 (45.9 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 28/101 (27%), Positives = 49/101 (48%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTASDDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY------------IKRKENGKVENSEEDSEFDE 155
++++ A Y + + E K + EED E DE
Sbjct: 154 KYEKDTAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 194
Score = 44 (20.5 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE E EED E +E E
Sbjct: 183 KKKEEEDDEEDEEDEEEEEEE 203
>RGD|1593466 [details] [associations]
symbol:LOC689398 "similar to High mobility group protein 1
(HMG-1) (High mobility group protein B1) (Amphoterin)
(Heparin-binding protein p30)" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] REFSEQ:XM_001068941 Ncbi:XP_001068941
Length = 214
Score = 132 (51.5 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 27/81 (33%), Positives = 48/81 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEVSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 116 (45.9 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 28/101 (27%), Positives = 49/101 (48%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTASDDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY------------IKRKENGKVENSEEDSEFDE 155
++++ A Y + + E K + EED E DE
Sbjct: 154 KYEKDTAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 194
Score = 44 (20.5 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE E EED E +E E
Sbjct: 183 KKKEEEDDEEDEEDEEEEEEE 203
>UNIPROTKB|P10103 [details] [associations]
symbol:HMGB1 "High mobility group protein B1" species:9913
"Bos taurus" [GO:0050918 "positive chemotaxis" evidence=IDA]
[GO:0017055 "negative regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=ISS]
[GO:0006288 "base-excision repair, DNA ligation" evidence=ISS]
[GO:0000793 "condensed chromosome" evidence=ISS] [GO:0033151 "V(D)J
recombination" evidence=IDA] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=NAS] [GO:0042393 "histone binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006265 "DNA topological change" evidence=IDA]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0008301
"DNA binding, bending" evidence=IDA] [GO:0001773 "myeloid dendritic
cell activation" evidence=IDA] [GO:0042056 "chemoattractant
activity" evidence=IDA] [GO:0002407 "dendritic cell chemotaxis"
evidence=IDA] [GO:0006310 "DNA recombination" evidence=IDA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043280 "positive regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0017053 GO:GO:0009986
GO:GO:0005730 GO:GO:0002437 GO:GO:0003684 GO:GO:0045944
GO:GO:0003700 GO:GO:0006338 eggNOG:COG5648 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0043065 GO:GO:0003690 GO:GO:0003697 GO:GO:0043280
GO:GO:0042393 GO:GO:0000793 GO:GO:0042056 GO:GO:0043388
GO:GO:0002407 GO:GO:0001773 Pfam:PF09011 GO:GO:0033151
GO:GO:0006265 OrthoDB:EOG4KWJV1 HOGENOM:HOG000197861 OMA:GEDAMRK
KO:K10802 GO:GO:0017055 EMBL:X12796 EMBL:BT030587 EMBL:BC102929
EMBL:M26110 IPI:IPI00710114 PIR:S01947 RefSeq:NP_788785.1
UniGene:Bt.49650 ProteinModelPortal:P10103 SMR:P10103 STRING:P10103
PRIDE:P10103 Ensembl:ENSBTAT00000024094 GeneID:282691
KEGG:bta:282691 CTD:3146 GeneTree:ENSGT00560000076717
HOVERGEN:HBG009000 InParanoid:P10103 NextBio:20806359 GO:GO:0006288
Uniprot:P10103
Length = 215
Score = 129 (50.5 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 115 (45.5 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 28/104 (26%), Positives = 53/104 (50%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY-------------IKRKENGKVENSEEDSEFDEYE 157
++++ +A Y +K +++ K + EED E +E E
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
Score = 45 (20.9 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE + E EED E +E E
Sbjct: 183 KKKEEEEDEEDEEDEEEEEDE 203
>UNIPROTKB|Q6YKA4 [details] [associations]
symbol:HMGB1 "High mobility group protein B1" species:9615
"Canis lupus familiaris" [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0043388 "positive regulation of
DNA binding" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0033151 "V(D)J recombination"
evidence=IEA] [GO:0017055 "negative regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0006288 "base-excision
repair, DNA ligation" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0002437 "inflammatory response to antigenic stimulus"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 GO:GO:0017053
GO:GO:0009986 GO:GO:0005730 GO:GO:0002437 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 eggNOG:COG5648 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0043065
GO:GO:0043280 GO:GO:0000793 GO:GO:0043388 Pfam:PF09011
GO:GO:0033151 OrthoDB:EOG4KWJV1 HOGENOM:HOG000197861 OMA:GEDAMRK
KO:K10802 GO:GO:0017055 CTD:3146 GeneTree:ENSGT00560000076717
HOVERGEN:HBG009000 GO:GO:0006288 EMBL:AY135519 EMBL:AY135521
RefSeq:NP_001002937.1 UniGene:Cfa.416 ProteinModelPortal:Q6YKA4
SMR:Q6YKA4 STRING:Q6YKA4 PRIDE:Q6YKA4 Ensembl:ENSCAFT00000010639
GeneID:403170 KEGG:cfa:403170 InParanoid:Q6YKA4 NextBio:20816914
Uniprot:Q6YKA4
Length = 215
Score = 129 (50.5 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 115 (45.5 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 28/104 (26%), Positives = 53/104 (50%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY-------------IKRKENGKVENSEEDSEFDEYE 157
++++ +A Y +K +++ K + EED E +E E
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
Score = 45 (20.9 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE + E EED E +E E
Sbjct: 183 KKKEEEEDEEDEEDEEEEEDE 203
>UNIPROTKB|P09429 [details] [associations]
symbol:HMGB1 "High mobility group protein B1" species:9606
"Homo sapiens" [GO:0001654 "eye development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0010858
"calcium-dependent protein kinase regulator activity" evidence=IEA]
[GO:0030295 "protein kinase activator activity" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IEA] [GO:0045639 "positive regulation of
myeloid cell differentiation" evidence=IEA] [GO:0045819 "positive
regulation of glycogen catabolic process" evidence=IEA] [GO:0051384
"response to glucocorticoid stimulus" evidence=IEA] [GO:2000426
"negative regulation of apoptotic cell clearance" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006288 "base-excision repair, DNA ligation" evidence=IDA]
[GO:0017055 "negative regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IDA]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0050786 "RAGE receptor binding" evidence=ISS] [GO:0043388
"positive regulation of DNA binding" evidence=IDA] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IDA] [GO:0005125 "cytokine activity"
evidence=ISS] [GO:0001773 "myeloid dendritic cell activation"
evidence=ISS] [GO:0002407 "dendritic cell chemotaxis" evidence=ISS]
[GO:0042056 "chemoattractant activity" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0051103 "DNA ligation involved in DNA
repair" evidence=ISS] [GO:0009986 "cell surface" evidence=IDA]
[GO:0002437 "inflammatory response to antigenic stimulus"
evidence=IEP] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0006265 "DNA topological change" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0008301 "DNA
binding, bending" evidence=ISS;IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0033151 "V(D)J recombination" evidence=IDA]
[GO:0003684 "damaged DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0070491
"repressing transcription factor binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006309 "apoptotic DNA fragmentation"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006921 "cellular component disassembly involved in execution
phase of apoptosis" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0050918 "positive chemotaxis"
evidence=ISS] Reactome:REACT_578 InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0005615 GO:GO:0005654 GO:GO:0009986
GO:GO:0002437 GO:GO:0003684 GO:GO:0030324 EMBL:CH471075
GO:GO:0045944 GO:GO:0051384 GO:GO:0043005 GO:GO:0045087
GO:GO:0003700 GO:GO:0045860 GO:GO:0030295 eggNOG:COG5648
GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0043065 GO:GO:0003690 GO:GO:0003697
GO:GO:0043280 GO:GO:0045819 GO:GO:0005125 GO:GO:0006309
GO:GO:0000793 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0042056 GO:GO:0031175 GO:GO:0001654 GO:GO:0043388
GO:GO:0002407 GO:GO:0001773 Pfam:PF09011 GO:GO:0033151
GO:GO:0006265 GO:GO:0045639 OrthoDB:EOG4KWJV1 HOGENOM:HOG000197861
OMA:GEDAMRK KO:K10802 GO:GO:0017055 CTD:3146 HOVERGEN:HBG009000
GO:GO:0006288 EMBL:X12597 EMBL:U51677 EMBL:D63874 EMBL:EF157968
EMBL:AY377859 EMBL:AK291494 EMBL:AK122825 EMBL:CR749614
EMBL:CR456863 EMBL:BT006940 EMBL:BT020159 EMBL:EU012027
EMBL:AL353648 EMBL:BC003378 EMBL:BC030981 EMBL:BC066889
EMBL:BC067732 EMBL:BC141844 IPI:IPI00419258 PIR:S02826
RefSeq:NP_002119.1 UniGene:Hs.434102 UniGene:Hs.593339
UniGene:Hs.596078 UniGene:Hs.741195 PDB:2LY4 PDB:2YRQ PDBsum:2LY4
PDBsum:2YRQ ProteinModelPortal:P09429 SMR:P09429 DIP:DIP-24195N
IntAct:P09429 MINT:MINT-153055 STRING:P09429 PhosphoSite:P09429
DMDM:123369 DOSAC-COBS-2DPAGE:P09429 PaxDb:P09429
PeptideAtlas:P09429 PRIDE:P09429 DNASU:3146 Ensembl:ENST00000339872
Ensembl:ENST00000341423 Ensembl:ENST00000399494
Ensembl:ENST00000405805 GeneID:3146 KEGG:hsa:3146 UCSC:uc001usx.3
GeneCards:GC13M031032 H-InvDB:HIX0030745 HGNC:HGNC:4983
HPA:CAB005873 HPA:HPA003506 MIM:163905 neXtProt:NX_P09429
PharmGKB:PA188 InParanoid:P09429 PhylomeDB:P09429 ChiTaRS:HMGB1
EvolutionaryTrace:P09429 GenomeRNAi:3146 NextBio:12470
ArrayExpress:P09429 Bgee:P09429 CleanEx:HS_HMGB1
Genevestigator:P09429 GermOnline:ENSG00000189403 GO:GO:0010858
GO:GO:0050786 GO:GO:2000426 Uniprot:P09429
Length = 215
Score = 129 (50.5 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 115 (45.5 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 28/104 (26%), Positives = 53/104 (50%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY-------------IKRKENGKVENSEEDSEFDEYE 157
++++ +A Y +K +++ K + EED E +E E
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
Score = 45 (20.9 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE + E EED E +E E
Sbjct: 183 KKKEEEEDEEDEEDEEEEEDE 203
>UNIPROTKB|F2Z594 [details] [associations]
symbol:HMGB1 "High mobility group protein B1" species:9823
"Sus scrofa" [GO:2000426 "negative regulation of apoptotic cell
clearance" evidence=IEA] [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0051384 "response to
glucocorticoid stimulus" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045819 "positive regulation of glycogen
catabolic process" evidence=IEA] [GO:0045639 "positive regulation
of myeloid cell differentiation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0043280
"positive regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IEA] [GO:0033151 "V(D)J recombination"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0030295 "protein kinase activator activity" evidence=IEA]
[GO:0017055 "negative regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0010858 "calcium-dependent protein kinase regulator activity"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0006288
"base-excision repair, DNA ligation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005125 "cytokine activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002437 "inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0001654 "eye development"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 GO:GO:0005737
GO:GO:0017053 GO:GO:0005615 GO:GO:0009986 GO:GO:0005730
GO:GO:0002437 GO:GO:0003677 GO:GO:0030324 GO:GO:0045944
GO:GO:0051384 GO:GO:0043005 GO:GO:0003700 GO:GO:0045860
GO:GO:0030295 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0043065 GO:GO:0043280 GO:GO:0045819
GO:GO:0000793 GO:GO:0001654 GO:GO:0043388 Pfam:PF09011
GO:GO:0033151 GO:GO:0045639 OMA:GEDAMRK GO:GO:0017055
GeneTree:ENSGT00560000076717 GO:GO:0006288 GO:GO:0010858
GO:GO:2000426 EMBL:CU062617 ProteinModelPortal:F2Z594 SMR:F2Z594
PRIDE:F2Z594 Ensembl:ENSSSCT00000010221 Uniprot:F2Z594
Length = 215
Score = 129 (50.5 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 115 (45.5 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 28/104 (26%), Positives = 53/104 (50%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY-------------IKRKENGKVENSEEDSEFDEYE 157
++++ +A Y +K +++ K + EED E +E E
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
Score = 45 (20.9 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE + E EED E +E E
Sbjct: 183 KKKEEEEDEEDEEDEEEEEDE 203
>UNIPROTKB|P12682 [details] [associations]
symbol:HMGB1 "High mobility group protein B1" species:9823
"Sus scrofa" [GO:0051103 "DNA ligation involved in DNA repair"
evidence=IDA] [GO:0017055 "negative regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=ISS]
[GO:0000793 "condensed chromosome" evidence=ISS] [GO:0006288
"base-excision repair, DNA ligation" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 eggNOG:COG5648 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000793
Pfam:PF09011 OrthoDB:EOG4KWJV1 HOGENOM:HOG000197861 KO:K10802
GO:GO:0017055 CTD:3146 HOVERGEN:HBG009000 GO:GO:0006288 EMBL:M21683
PIR:A28897 RefSeq:NP_001004034.1 UniGene:Ssc.22696
ProteinModelPortal:P12682 SMR:P12682 STRING:P12682 PRIDE:P12682
GeneID:445521 KEGG:ssc:445521 Uniprot:P12682
Length = 215
Score = 129 (50.5 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 115 (45.5 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 33/104 (31%), Positives = 53/104 (50%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT------YEEKV----- 115
PK+PP+AFF F ++R + ++P + S+ + K GE W YE+K
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKHPYEKKAAKLKE 153
Query: 116 KYY-DIATEK-RAEFDRAMADYIKRKENGKVENSEEDSEFDEYE 157
KY DIA + + + D A +K +++ K + EED E +E E
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
Score = 45 (20.9 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE + E EED E +E E
Sbjct: 183 KKKEEEEDEEDEEDEEEEEDE 203
>RGD|1585821 [details] [associations]
symbol:LOC680968 "similar to High mobility group protein 1
(HMG-1) (High mobility group protein B1) (Amphoterin)
(Heparin-binding protein p30)" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] REFSEQ:XM_001059688 Ncbi:XP_001059688
Length = 213
Score = 129 (50.5 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 118 (46.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY------------IKRKENGKVENSEEDSEFDE 155
++++ +A Y + + E K + EED E DE
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 194
Score = 44 (20.5 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE E EED E +E E
Sbjct: 183 KKKEEEDDEEDEEDEEEEEEE 203
>RGD|1586285 [details] [associations]
symbol:LOC691220 "hypothetical protein LOC691220" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 RGD:1560584
RGD:1586285 RGD:1588313 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 OrthoDB:EOG4KWJV1 KO:K10802
GeneTree:ENSGT00560000076717 UniGene:Rn.4121 EMBL:CH474054
IPI:IPI00557035 RefSeq:NP_001102843.1 UniGene:Rn.151172
Ensembl:ENSRNOT00000047553 GeneID:679571 KEGG:rno:679571 CTD:434174
NextBio:716771 Uniprot:D3ZCR3
Length = 214
Score = 129 (50.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 114 (45.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY------------IKRKENGKVENSEEDSEFDE 155
++++ + Y + + E K + EED+E DE
Sbjct: 154 KYEKDIPAYRAKGKPDAAKKGVVKAEKSKKKKEEEDNEEDE 194
Score = 44 (20.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE E EED E +E E
Sbjct: 183 KKKEEEDNEEDEEDEEEEEEE 203
Score = 34 (17.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
+ ++N + E EE+ E +E E
Sbjct: 186 EEEDNEEDEEDEEEEEEEEDE 206
>RGD|1588313 [details] [associations]
symbol:LOC679451 "similar to High mobility group protein 1
(HMG-1) (High mobility group protein B1) (Amphoterin)
(Heparin-binding protein p30)" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 RGD:1560584
RGD:1586285 RGD:1588313 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 OrthoDB:EOG4KWJV1 KO:K10802
GeneTree:ENSGT00560000076717 UniGene:Rn.4121 EMBL:CH474054
IPI:IPI00557035 RefSeq:NP_001102843.1 UniGene:Rn.151172
Ensembl:ENSRNOT00000047553 GeneID:679571 KEGG:rno:679571 CTD:434174
NextBio:716771 Uniprot:D3ZCR3
Length = 214
Score = 129 (50.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 114 (45.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY------------IKRKENGKVENSEEDSEFDE 155
++++ + Y + + E K + EED+E DE
Sbjct: 154 KYEKDIPAYRAKGKPDAAKKGVVKAEKSKKKKEEEDNEEDE 194
Score = 44 (20.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE E EED E +E E
Sbjct: 183 KKKEEEDNEEDEEDEEEEEEE 203
Score = 34 (17.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
+ ++N + E EE+ E +E E
Sbjct: 186 EEEDNEEDEEDEEEEEEEEDE 206
>RGD|1596979 [details] [associations]
symbol:LOC678705 "hypothetical protein LOC678705" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] REFSEQ:XM_001053005
Ncbi:XP_001053005
Length = 214
Score = 129 (50.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 116 (45.9 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEIWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY------------IKRKENGKVENSEEDSEFDE 155
++++ +A Y + + E K + EED E DE
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 194
Score = 44 (20.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE E EED E +E E
Sbjct: 183 KKKEEEDDEEDEEDEEEEEEE 203
>RGD|1591683 [details] [associations]
symbol:LOC681718 "similar to High mobility group protein 1
(HMG-1) (High mobility group protein B1) (Amphoterin)
(Heparin-binding protein p30)" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 RGD:1591683
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Pfam:PF09011
GeneTree:ENSGT00560000076717 IPI:IPI00767302
Ensembl:ENSRNOT00000045504 OMA:NNTASED ArrayExpress:F1MA29
Uniprot:F1MA29
Length = 215
Score = 129 (50.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 118 (46.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY------------IKRKENGKVENSEEDSEFDE 155
++++ +A Y + + E K + EED E DE
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 194
Score = 44 (20.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE E EED E +E E
Sbjct: 183 KKKEEEDDEEDEEDEEEEEEE 203
>RGD|2802 [details] [associations]
symbol:Hmgb1 "high mobility group box 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000400 "four-way
junction DNA binding" evidence=IDA] [GO:0000401 "open form four-way
junction DNA binding" evidence=IDA] [GO:0000402 "crossed form
four-way junction DNA binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0001654 "eye development" evidence=ISO] [GO:0001934
"positive regulation of protein phosphorylation" evidence=ISO]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IDA] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=ISO] [GO:0003681 "bent DNA binding" evidence=IDA]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005125 "cytokine activity" evidence=ISO;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0006288 "base-excision repair, DNA
ligation" evidence=ISO] [GO:0006357 "regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0006935 "chemotaxis"
evidence=IDA] [GO:0007399 "nervous system development" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IEP] [GO:0008097 "5S rRNA
binding" evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=ISO;IDA] [GO:0008156 "negative regulation of DNA
replication" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0008301 "DNA binding, bending"
evidence=ISO;IDA] [GO:0009408 "response to heat" evidence=IEP]
[GO:0009749 "response to glucose stimulus" evidence=IEP] [GO:0009986
"cell surface" evidence=ISO] [GO:0010858 "calcium-dependent protein
kinase regulator activity" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=IMP] [GO:0010976 "positive
regulation of neuron projection development" evidence=IMP]
[GO:0014911 "positive regulation of smooth muscle cell migration"
evidence=IMP] [GO:0017055 "negative regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=ISO]
[GO:0030295 "protein kinase activator activity" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0030335 "positive
regulation of cell migration" evidence=IDA] [GO:0031175 "neuron
projection development" evidence=IGI] [GO:0031532 "actin cytoskeleton
reorganization" evidence=IMP] [GO:0032392 "DNA geometric change"
evidence=IDA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEP] [GO:0032868 "response to insulin stimulus"
evidence=IEP] [GO:0033034 "positive regulation of myeloid cell
apoptotic process" evidence=IDA] [GO:0033151 "V(D)J recombination"
evidence=ISO] [GO:0034341 "response to interferon-gamma"
evidence=IMP] [GO:0042277 "peptide binding" evidence=IDA] [GO:0042493
"response to drug" evidence=IEP] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO;IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0043388 "positive regulation of DNA binding" evidence=ISO]
[GO:0045639 "positive regulation of myeloid cell differentiation"
evidence=ISO] [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IMP] [GO:0045819 "positive regulation of
glycogen catabolic process" evidence=ISO] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0050727 "regulation of inflammatory response"
evidence=IDA] [GO:0050786 "RAGE receptor binding" evidence=IMP;IPI]
[GO:0050831 "male-specific defense response to bacterium"
evidence=IDA] [GO:0050930 "induction of positive chemotaxis"
evidence=IDA] [GO:0051384 "response to glucocorticoid stimulus"
evidence=ISO] [GO:0051450 "myoblast proliferation" evidence=IMP]
[GO:0051861 "glycolipid binding" evidence=IDA] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0071347
"cellular response to interleukin-1" evidence=IEP] [GO:0017053
"transcriptional repressor complex" evidence=ISO] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 RGD:2802
GO:GO:0005634 GO:GO:0005737 GO:GO:0005694 GO:GO:0005615 GO:GO:0010976
GO:GO:0042493 GO:GO:0045931 GO:GO:0007623 GO:GO:0009749 GO:GO:0032496
GO:GO:0008201 GO:GO:0009408 GO:GO:0006935 GO:GO:0032868 GO:GO:0046983
eggNOG:COG5648 GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0031532 GO:GO:0050727
GO:GO:0042277 GO:GO:0003690 GO:GO:0003697 GO:GO:0000902 GO:GO:0033034
GO:GO:0005125 GO:GO:0008134 GO:GO:0031175 GO:GO:0071347 GO:GO:0050930
GO:GO:0008156 GO:GO:0034341 GO:GO:0002053 GO:GO:0014911 GO:GO:0045663
GO:GO:0008097 GO:GO:0003681 GO:GO:0051861 Pfam:PF09011 GO:GO:0051450
OrthoDB:EOG4KWJV1 HOGENOM:HOG000197861 KO:K10802 CTD:3146
HOVERGEN:HBG009000 GO:GO:0050786 EMBL:M64986 EMBL:Y00463
EMBL:AF275734 EMBL:BC061779 EMBL:BC081839 EMBL:BC088402
IPI:IPI00555214 PIR:A41175 RefSeq:NP_037095.1 UniGene:Rn.144565
UniGene:Rn.15185 UniGene:Rn.4121 PDB:1AAB PDB:1CKT PDB:1HME PDB:1HMF
PDB:2GZK PDBsum:1AAB PDBsum:1CKT PDBsum:1HME PDBsum:1HMF PDBsum:2GZK
ProteinModelPortal:P63159 SMR:P63159 STRING:P63159 PhosphoSite:P63159
PRIDE:P63159 GeneID:25459 KEGG:rno:25459 InParanoid:P63159
EvolutionaryTrace:P63159 NextBio:606729 ArrayExpress:P63159
Genevestigator:P63159 GermOnline:ENSRNOG00000030351 GO:GO:0000402
GO:GO:0000401 GO:GO:0032392 GO:GO:0050831 Uniprot:P63159
Length = 215
Score = 129 (50.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 118 (46.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY------------IKRKENGKVENSEEDSEFDE 155
++++ +A Y + + E K + EED E DE
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 194
Score = 44 (20.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE E EED E +E E
Sbjct: 183 KKKEEEDDEEDEEDEEEEEEE 203
>TAIR|locus:2154433 [details] [associations]
symbol:HMGB6 "high-mobility group box 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HSSP:P07155 EMBL:AB018110 HOGENOM:HOG000242532 EMBL:AK118688
EMBL:AY086023 IPI:IPI00542717 RefSeq:NP_568431.1 UniGene:At.31011
ProteinModelPortal:Q8LDF9 SMR:Q8LDF9 STRING:Q8LDF9 PaxDb:Q8LDF9
PRIDE:Q8LDF9 EnsemblPlants:AT5G23420.1 GeneID:832408
KEGG:ath:AT5G23420 TAIR:At5g23420 eggNOG:NOG297541
InParanoid:Q8LDF9 OMA:AFFLFMD PhylomeDB:Q8LDF9
ProtClustDB:CLSN2689854 Genevestigator:Q8LDF9 Uniprot:Q8LDF9
Length = 241
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 38/88 (43%), Positives = 52/88 (59%)
Query: 67 PKKPPTAFFYFLEDFRKGFQ-EQNPDI-KSMRAIGKACGEKWKTMTYEEKVKYYDIATEK 124
PK+P TAFF F+ DFRK F+ E N + K IG GEKWK++T EEK Y D A E
Sbjct: 115 PKRPLTAFFIFMSDFRKTFKSEHNGSLAKDAAKIG---GEKWKSLTEEEKKVYLDKAAEL 171
Query: 125 RAEFDRAMADYIKRKENGKVENSEEDSE 152
+AE+++++ E+ + EED E
Sbjct: 172 KAEYNKSL-------ESNDADEEEEDEE 192
>UNIPROTKB|E1BMK2 [details] [associations]
symbol:E1BMK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0005737
GO:GO:0005615 GO:GO:0003677 GO:GO:0030324 GO:GO:0045944
GO:GO:0051384 GO:GO:0043005 GO:GO:0045860 GO:GO:0030295
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0045819 GO:GO:0001654 Pfam:PF09011 GO:GO:0045639
GeneTree:ENSGT00560000076717 GO:GO:0010858 GO:GO:2000426
EMBL:DAAA02042275 IPI:IPI00688378 Ensembl:ENSBTAT00000019791
OMA:EXDIAAY Uniprot:E1BMK2
Length = 215
Score = 126 (49.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ +++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHTKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 VDKARYEREMKTYIPPKGETK 86
Score = 116 (45.9 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 28/104 (26%), Positives = 53/104 (50%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAVDDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY-------------IKRKENGKVENSEEDSEFDEYE 157
++++ +A Y +K +++ K + EED E +E E
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
Score = 45 (20.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE + E EED E +E E
Sbjct: 183 KKKEEEEDEEDEEDEEEEEDE 203
>RGD|1588759 [details] [associations]
symbol:Hmgb1-ps3 "high mobility group box 1, pseudogene 3"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
RGD:1588759 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Pfam:PF09011
OrthoDB:EOG4KWJV1 GeneTree:ENSGT00560000076717 IPI:IPI00366734
Ensembl:ENSRNOT00000046626 Uniprot:D3ZGW6
Length = 212
Score = 125 (49.1 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ ++ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCQEEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 105 (42.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/101 (27%), Positives = 49/101 (48%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP AFF F ++R + ++P + S+ + K GE W ++K A + +
Sbjct: 95 PKRPPLAFFLFCSEYRPKIKGEHPGL-SIGDVVKKLGEMWNNTAVDDKQPCEKKAAKLKE 153
Query: 127 EFDRAMADY--------IKR----KENGKVENSEEDSEFDE 155
++++ +A Y +K+ E K + EED E DE
Sbjct: 154 KYEKDIAAYRAKGKPDAVKKGVVKAEKSKKKKEEEDDEEDE 194
Score = 44 (20.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE E EED E +E E
Sbjct: 183 KKKEEEDDEEDEEDEEEEEEE 203
>RGD|1587112 [details] [associations]
symbol:Hmg1l1 "high-mobility group (nonhistone chromosomal)
protein 1-like 1" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 RGD:1587112
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Pfam:PF09011 OrthoDB:EOG4KWJV1
GeneTree:ENSGT00560000076717 IPI:IPI00564933 RefSeq:XP_003748829.1
RefSeq:XP_003753270.1 Ensembl:ENSRNOT00000047765 GeneID:100909581
KEGG:rno:100909581 OMA:KEYHSAR Uniprot:D3ZL49
Length = 215
Score = 126 (49.4 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPHKGETK 86
Score = 120 (47.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 28/101 (27%), Positives = 51/101 (50%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y +A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWTNTAADDKQPYGKMAAKLKE 153
Query: 127 EFDRAMADY------------IKRKENGKVENSEEDSEFDE 155
++++ +A Y + + E K + EED E DE
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 194
Score = 41 (19.5 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 137 KRKENGKVENSEEDSEFDE 155
K+KE E EED E +E
Sbjct: 183 KKKEEEDDEEDEEDEEEEE 201
>UNIPROTKB|F1NPU8 [details] [associations]
symbol:HMGB2 "High mobility group protein B2" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=IEA] [GO:0001938 "positive
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006288 "base-excision repair, DNA ligation" evidence=IEA]
[GO:0007289 "spermatid nucleus differentiation" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008584 "male
gonad development" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0032075 "positive regulation of
nuclease activity" evidence=IEA] [GO:0042056 "chemoattractant
activity" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045648 "positive regulation of erythrocyte
differentiation" evidence=IEA] [GO:0045654 "positive regulation of
megakaryocyte differentiation" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0048545 "response to steroid
hormone stimulus" evidence=IEA] [GO:0050786 "RAGE receptor binding"
evidence=IEA] [GO:0060326 "cell chemotaxis" evidence=IEA]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0048471 GO:GO:0045892 GO:GO:0005615 GO:GO:0043234
GO:GO:0005730 GO:GO:0003684 GO:GO:0001938 GO:GO:0045944
GO:GO:0003700 GO:GO:0048545 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0045648 GO:GO:0045654 GO:GO:0060326 GO:GO:0000793
GO:GO:0042056 GO:GO:0043388 Pfam:PF09011 GO:GO:0032075
GeneTree:ENSGT00560000076717 GO:GO:0006288 OMA:KIKNDHP
IPI:IPI00579203 EMBL:AADN02008951 Ensembl:ENSGALT00000017483
Uniprot:F1NPU8
Length = 207
Score = 126 (49.4 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 24/80 (30%), Positives = 49/80 (61%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ YF++ R+ ++++PD + + C E+WKTM+ +EK K+ ++A +
Sbjct: 9 PRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGDK 68
Query: 126 AEFDRAMADYI--KRKENGK 143
A +DR M +Y+ K ++ GK
Sbjct: 69 ARYDREMKNYVPPKGEKKGK 88
Score = 105 (42.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/98 (27%), Positives = 50/98 (51%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + +P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKNDHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY-IKRKEN------GKVENSEEDSEFDEYE 157
++++ +A Y K K + G+ S++ +E +E E
Sbjct: 154 KYEKDIAAYRAKSKSDAGKKGPGRPAGSKKKAEPEEEE 191
Score = 39 (18.8 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+ E + E EED E +E E
Sbjct: 183 KKAEPEEEEEEEEDEEEEEEE 203
Score = 37 (18.1 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+K + E EE+ E +E E
Sbjct: 182 KKKAEPEEEEEEEEDEEEEEE 202
>UNIPROTKB|P26584 [details] [associations]
symbol:HMGB2 "High mobility group protein B2" species:9031
"Gallus gallus" [GO:0008301 "DNA binding, bending" evidence=ISS]
[GO:0006288 "base-excision repair, DNA ligation" evidence=ISS]
[GO:0000793 "condensed chromosome" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0048471
GO:GO:0006357 GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000793 Pfam:PF09011
HOGENOM:HOG000197861 KO:K11295 HOVERGEN:HBG009000 GO:GO:0006288
CTD:3148 OrthoDB:EOG4TTGK2 EMBL:M83235 EMBL:M80574 IPI:IPI00579203
PIR:JC1114 PIR:JC1129 RefSeq:NP_990817.1 UniGene:Gga.4061
ProteinModelPortal:P26584 SMR:P26584 STRING:P26584 PRIDE:P26584
GeneID:396482 KEGG:gga:396482 eggNOG:NOG320947 InParanoid:P26584
NextBio:20816521 Uniprot:P26584
Length = 207
Score = 126 (49.4 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 24/80 (30%), Positives = 49/80 (61%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ YF++ R+ ++++PD + + C E+WKTM+ +EK K+ ++A +
Sbjct: 9 PRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGDK 68
Query: 126 AEFDRAMADYI--KRKENGK 143
A +DR M +Y+ K ++ GK
Sbjct: 69 ARYDREMKNYVPPKGEKKGK 88
Score = 103 (41.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 27/98 (27%), Positives = 49/98 (50%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + +P + S+ K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKNDHPGL-SIGDTAKKLGEMWSEQLAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY-IKRKEN------GKVENSEEDSEFDEYE 157
++++ +A Y K K + G+ S++ +E +E E
Sbjct: 154 KYEKDIAAYRAKSKSDAGKKGPGRPAGSKKKAEPEEEE 191
Score = 39 (18.8 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+ E + E EED E +E E
Sbjct: 183 KKAEPEEEEEEEEDEEEEEEE 203
Score = 37 (18.1 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+K + E EE+ E +E E
Sbjct: 182 KKKAEPEEEEEEEEDEEEEEE 202
>UNIPROTKB|F1N927 [details] [associations]
symbol:HMGB1 "High mobility group protein B1" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=IEA] [GO:0001654 "eye development"
evidence=IEA] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005125 "cytokine
activity" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006288
"base-excision repair, DNA ligation" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] [GO:0010858 "calcium-dependent protein
kinase regulator activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0017055
"negative regulation of RNA polymerase II transcriptional
preinitiation complex assembly" evidence=IEA] [GO:0030295 "protein
kinase activator activity" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0033151 "V(D)J recombination"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0045639 "positive regulation of myeloid cell differentiation"
evidence=IEA] [GO:0045819 "positive regulation of glycogen
catabolic process" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0051384 "response to glucocorticoid stimulus" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:2000426 "negative regulation of apoptotic cell clearance"
evidence=IEA] InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353
Pfam:PF00505 GO:GO:0005737 GO:GO:0017053 GO:GO:0005615
GO:GO:0009986 GO:GO:0005730 GO:GO:0002437 GO:GO:0003677
GO:GO:0045944 GO:GO:0051384 GO:GO:0043005 GO:GO:0003700
GO:GO:0045860 GO:GO:0030295 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0043065 GO:GO:0043280
GO:GO:0045819 GO:GO:0000793 GO:GO:0043388 Pfam:PF09011
GO:GO:0045639 OMA:GEDAMRK GO:GO:0017055
GeneTree:ENSGT00560000076717 GO:GO:0006288 GO:GO:0010858
GO:GO:2000426 EMBL:AADN02005232 IPI:IPI00818014
Ensembl:ENSGALT00000036454 ArrayExpress:F1N927 Uniprot:F1N927
Length = 214
Score = 122 (48.0 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 24/81 (29%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +++ M +Y+ K K
Sbjct: 66 ADKLRYEKEMKNYVPPKGETK 86
Score = 117 (46.2 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F +FR + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADYIKRKENGKVE 145
++++ +A Y + GKV+
Sbjct: 154 KYEKDIAAY---RAKGKVD 169
Score = 44 (20.5 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE + E+ +E+ E DE E
Sbjct: 183 KKKEEEEDEDEDEEDEEDEEE 203
Score = 38 (18.4 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K++E + EED E +E E
Sbjct: 184 KKEEEEDEDEDEEDEEDEEEE 204
>UNIPROTKB|Q9YH06 [details] [associations]
symbol:HMG1 "High mobility group 1 protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=IEA] [GO:0001654 "eye development"
evidence=IEA] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005125 "cytokine
activity" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006288
"base-excision repair, DNA ligation" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] [GO:0010858 "calcium-dependent protein
kinase regulator activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0017055
"negative regulation of RNA polymerase II transcriptional
preinitiation complex assembly" evidence=IEA] [GO:0030295 "protein
kinase activator activity" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0033151 "V(D)J recombination"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0045639 "positive regulation of myeloid cell differentiation"
evidence=IEA] [GO:0045819 "positive regulation of glycogen
catabolic process" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0051384 "response to glucocorticoid stimulus" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:2000426 "negative regulation of apoptotic cell clearance"
evidence=IEA] InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353
Pfam:PF00505 GO:GO:0005737 GO:GO:0017053 GO:GO:0005615
GO:GO:0009986 GO:GO:0005730 GO:GO:0002437 GO:GO:0003677
GO:GO:0045944 GO:GO:0051384 GO:GO:0043005 GO:GO:0003700
GO:GO:0045860 GO:GO:0030295 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0043065 GO:GO:0043280
GO:GO:0045819 GO:GO:0000793 GO:GO:0043388 Pfam:PF09011
GO:GO:0045639 HSSP:P07155 HOGENOM:HOG000197861 OMA:GEDAMRK
KO:K10802 GO:GO:0017055 CTD:3146 GeneTree:ENSGT00560000076717
HOVERGEN:HBG009000 GO:GO:0006288 GO:GO:0010858 GO:GO:2000426
EMBL:AADN02005232 EMBL:Y17968 EMBL:AJ851648 IPI:IPI00595982
RefSeq:NP_990233.1 UniGene:Gga.4638 SMR:Q9YH06 STRING:Q9YH06
Ensembl:ENSGALT00000027593 GeneID:395724 KEGG:gga:395724
InParanoid:Q9YH06 NextBio:20815793 Uniprot:Q9YH06
Length = 215
Score = 122 (48.0 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 24/81 (29%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +++ M +Y+ K K
Sbjct: 66 ADKLRYEKEMKNYVPPKGETK 86
Score = 117 (46.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F +FR + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADYIKRKENGKVE 145
++++ +A Y + GKV+
Sbjct: 154 KYEKDIAAY---RAKGKVD 169
Score = 44 (20.5 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE + E+ +E+ E DE E
Sbjct: 183 KKKEEEEDEDEDEEDEEDEEE 203
Score = 38 (18.4 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K++E + EED E +E E
Sbjct: 184 KKEEEEDEDEDEEDEEDEEEE 204
>RGD|1589528 [details] [associations]
symbol:LOC679344 "similar to High mobility group protein 1
(HMG-1) (High mobility group protein B1) (Amphoterin)
(Heparin-binding protein p30)" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] REFSEQ:XM_001054795 Ncbi:XP_001054795
Length = 215
Score = 121 (47.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 67 PKK---PPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKK +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 104 (41.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 26/101 (25%), Positives = 48/101 (47%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++ + ++P + S+ + K GE W ++K A + +
Sbjct: 95 PKRPPSAFFLFCSEYHPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPCEKKAAKLKE 153
Query: 127 EFDRAMADY------------IKRKENGKVENSEEDSEFDE 155
++++ +A Y + + E K + EED E DE
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 194
Score = 44 (20.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE E EED E +E E
Sbjct: 183 KKKEEEDDEEDEEDEEEEEEE 203
>RGD|1592627 [details] [associations]
symbol:LOC685520 "similar to High mobility group protein 1
(HMG-1) (High mobility group protein B1) (Amphoterin)
(Heparin-binding protein p30)" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] REFSEQ:XM_003749913 Ncbi:XP_003749961
Length = 215
Score = 121 (47.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 67 PKK---PPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKK +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 104 (41.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 26/101 (25%), Positives = 48/101 (47%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++ + ++P + S+ + K GE W ++K A + +
Sbjct: 95 PKRPPSAFFLFCSEYHPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPCEKKAAKLKE 153
Query: 127 EFDRAMADY------------IKRKENGKVENSEEDSEFDE 155
++++ +A Y + + E K + EED E DE
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 194
Score = 44 (20.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE E EED E +E E
Sbjct: 183 KKKEEEDDEEDEEDEEEEEEE 203
>UNIPROTKB|P40618 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Pfam:PF09011
HOVERGEN:HBG009000 UniGene:Gga.4513 CTD:3149 KO:K11296 EMBL:X63463
IPI:IPI00580706 PIR:S22359 RefSeq:NP_990626.2
ProteinModelPortal:P40618 SMR:P40618 STRING:P40618 GeneID:396232
KEGG:gga:396232 NextBio:20816284 Uniprot:P40618
Length = 202
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 36/103 (34%), Positives = 55/103 (53%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F +FR + NP I S+ + K GE W ++ EK Y + A + +
Sbjct: 93 PKRPPSAFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKE 151
Query: 127 EFDRAMADY-IKRKENG-----------KVENSEEDSEFDEYE 157
++++ +ADY K K +G KVE +E+ E DE E
Sbjct: 152 KYEKDVADYKSKGKFDGAKGAATKAARKKVEEEDEEEEEDEEE 194
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +A+ +F++ R+ +++NP++ + K C E+WKTM+ +EK K+ ++A
Sbjct: 6 PKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +DR M DY K GK
Sbjct: 66 ADKVRYDREMKDYGPAK-GGK 85
>MGI|MGI:1098219 [details] [associations]
symbol:Hmgb3 "high mobility group box 3" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0045578 "negative regulation of B cell differentiation"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 MGI:MGI:1098219 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0045638
Pfam:PF09011 GO:GO:0045578 HOGENOM:HOG000197861 HOVERGEN:HBG009000
OrthoDB:EOG4TTGK2 eggNOG:NOG320947 CTD:3149 KO:K11296 EMBL:AF022465
EMBL:BC011276 EMBL:BC083352 IPI:IPI00228879 RefSeq:NP_032279.1
UniGene:Mm.336087 ProteinModelPortal:O54879 SMR:O54879
STRING:O54879 PhosphoSite:O54879 PaxDb:O54879 PRIDE:O54879
Ensembl:ENSMUST00000015361 Ensembl:ENSMUST00000072699
Ensembl:ENSMUST00000088874 Ensembl:ENSMUST00000114582 GeneID:15354
KEGG:mmu:15354 InParanoid:O54879 NextBio:287964 Bgee:O54879
CleanEx:MM_HMGB3 Genevestigator:O54879
GermOnline:ENSMUSG00000015217 Uniprot:O54879
Length = 200
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y A + +
Sbjct: 93 PKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKE 151
Query: 127 EFDRAMADY-IKRKENG----------KVENSEEDSEFDEYE 157
++++ +ADY K K +G KVE EE+ E +E E
Sbjct: 152 KYEKDVADYKSKGKFDGAKGPAKVARKKVEEEEEEEEEEEEE 193
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +A+ +F++ R+ +++NP++ + K C E+WKTM+ +EK K+ ++A
Sbjct: 6 PKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +DR M DY K GK
Sbjct: 66 ADKVRYDREMKDYGPAK-GGK 85
>RGD|1564407 [details] [associations]
symbol:Hmgb3 "high mobility group box 3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0045578 "negative regulation of B
cell differentiation" evidence=ISO] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=ISO]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
RGD:1564407 GO:GO:0005634 GO:GO:0003677 eggNOG:COG5648
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 HOGENOM:HOG000197861 GeneTree:ENSGT00560000076717
HOVERGEN:HBG009000 OrthoDB:EOG4TTGK2 CTD:3149 KO:K11296 OMA:DNEKQPY
EMBL:BC158739 EMBL:CH474187 IPI:IPI00955625 RefSeq:NP_001166812.1
RefSeq:XP_003751731.1 UniGene:Rn.203482 SMR:B0BN99 STRING:B0BN99
Ensembl:ENSRNOT00000015044 GeneID:100912369 GeneID:305373
KEGG:rno:100912369 KEGG:rno:305373 NextBio:654455
Genevestigator:B0BN99 Uniprot:B0BN99
Length = 200
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y A + +
Sbjct: 93 PKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYMTKAAKLKE 151
Query: 127 EFDRAMADY-IKRKENG----------KVENSEEDSEFDEYE 157
++++ +ADY K K +G KVE EE+ E +E E
Sbjct: 152 KYEKDVADYKSKGKFDGAKGPAKVARKKVEEEEEEEEEEEEE 193
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +A+ +F++ R+ +++NP++ + K C E+WKTM+ +EK K+ ++A
Sbjct: 6 PKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +DR M DY K GK
Sbjct: 66 ADKVRYDREMKDYGPAK-GGK 85
>UNIPROTKB|B2RPK0 [details] [associations]
symbol:HMGB1P1 "Putative high mobility group protein
B1-like 1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] InterPro:IPR009071 PROSITE:PS00353
Pfam:PF00505 GO:GO:0005634 GO:GO:0005694 GO:GO:0003677
eggNOG:COG5648 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Pfam:PF09011 EMBL:AL160176 UniGene:Hs.131543
EMBL:BC137482 EMBL:BC137483 IPI:IPI00022796
ProteinModelPortal:B2RPK0 SMR:B2RPK0 STRING:B2RPK0 PaxDb:B2RPK0
PRIDE:B2RPK0 GeneCards:GC20M056062 HGNC:HGNC:4993
neXtProt:NX_B2RPK0 InParanoid:B2RPK0 OrthoDB:EOG4KWJV1
PhylomeDB:B2RPK0 NextBio:39267 Genevestigator:B2RPK0 Uniprot:B2RPK0
Length = 211
Score = 112 (44.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++ D + C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ ++R M YI K K
Sbjct: 66 ADKTHYERQMKTYIPPKGETK 86
Score = 101 (40.6 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 29/104 (27%), Positives = 51/104 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV----------- 115
PK+PP+AFF F ++ + ++P + S+ + K GE W ++K
Sbjct: 95 PKRPPSAFFLFCSEYHPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKE 153
Query: 116 KYY-DIAT-EKRAEFDRAMADYIKRKENGKVENSEEDSEFDEYE 157
KY DIA + + + + A +K +++ K + EED E +E E
Sbjct: 154 KYEKDIAAYQAKGKPEAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
Score = 43 (20.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE + E EED E ++ E
Sbjct: 183 KKKEEEEDEEDEEDEEEEDEE 203
>UNIPROTKB|Q32L31 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9913
"Bos taurus" [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0008301 "DNA binding, bending" evidence=IDA]
[GO:0006310 "DNA recombination" evidence=IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006310
GO:GO:0003690 Pfam:PF09011 HSSP:P48431 HOGENOM:HOG000197861
GeneTree:ENSGT00560000076717 HOVERGEN:HBG009000 OrthoDB:EOG4TTGK2
eggNOG:NOG320947 EMBL:BC109793 IPI:IPI00883385
RefSeq:NP_001069753.2 RefSeq:NP_001106728.1 UniGene:Bt.62966
ProteinModelPortal:Q32L31 SMR:Q32L31 Ensembl:ENSBTAT00000005793
Ensembl:ENSBTAT00000006785 GeneID:613729 KEGG:bta:613729 CTD:3149
InParanoid:Q32L31 KO:K11296 OMA:DNEKQPY NextBio:20898733
ArrayExpress:Q32L31 Uniprot:Q32L31
Length = 200
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A + +
Sbjct: 93 PKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKE 151
Query: 127 EFDRAMADY-IKRKENG-----KVENS--EEDSEFDEYE 157
++++ +ADY K K +G KV EE+ E DE E
Sbjct: 152 KYEKDVADYKSKGKFDGAKGAAKVARKKVEEEDEEDEEE 190
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +A+ +F++ R+ +++NP++ + K C E+WKTM+ +EK K+ ++A
Sbjct: 6 PKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +DR M DY K GK
Sbjct: 66 ADKVRYDREMKDYGPAK-GGK 85
>UNIPROTKB|J9NVS3 [details] [associations]
symbol:HMGB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 GeneTree:ENSGT00560000076717 OMA:DNEKQPY
EMBL:AAEX03027044 EMBL:AAEX03027045 Ensembl:ENSCAFT00000045229
Uniprot:J9NVS3
Length = 219
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A + +
Sbjct: 111 PKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKE 169
Query: 127 EFDRAMADY-IKRKENG-----KVENS--EEDSEFDEYE 157
++++ +ADY K K +G KV EE+ E DE E
Sbjct: 170 KYEKDVADYKSKGKFDGAKGPAKVARKKVEEEDEEDEEE 208
Score = 133 (51.9 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +A+ +F++ R+ +++NP++ + K C E+WKTM+ +EK K+ ++A
Sbjct: 24 PKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAK 83
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +DR M DY K GK
Sbjct: 84 ADKVRYDREMKDYGPAK-GGK 103
>UNIPROTKB|F1RQ19 [details] [associations]
symbol:LOC100517745 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 GeneTree:ENSGT00560000076717 KO:K11296 OMA:DNEKQPY
EMBL:CU929821 RefSeq:XP_003135516.1 UniGene:Ssc.27311
Ensembl:ENSSSCT00000013934 GeneID:100517745 KEGG:ssc:100517745
Uniprot:F1RQ19
Length = 202
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A + +
Sbjct: 93 PKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKE 151
Query: 127 EFDRAMADY-IKRKENG----------KVENSEEDSEFDE 155
++++ +ADY K K +G KVE +ED + D+
Sbjct: 152 KYEKDVADYKSKGKFDGAKGPAKVARKKVEEDDEDEDDDD 191
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +A+ +F++ R+ +++NP++ + K C E+WKTM+ +EK K+ ++A
Sbjct: 6 PKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +DR M DY K GK
Sbjct: 66 ADKVRYDREMKDYGPAK-GGK 85
>UNIPROTKB|P36194 [details] [associations]
symbol:HMGB1 "High mobility group protein B1" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0003677 eggNOG:COG5648
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 HOVERGEN:HBG009000 EMBL:D14314 IPI:IPI00591130
PIR:I50254 UniGene:Gga.4513 ProteinModelPortal:P36194 SMR:P36194
STRING:P36194 PRIDE:P36194 Uniprot:P36194
Length = 201
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 35/103 (33%), Positives = 54/103 (52%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A + +
Sbjct: 92 PKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKE 150
Query: 127 EFDRAMADY-IKRKENG-----------KVENSEEDSEFDEYE 157
++++ +ADY K K +G KVE +E+ E DE E
Sbjct: 151 KYEKDVADYKSKGKFDGAKGAATKAARKKVEEEDEEEEEDEEE 193
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +A+ +F++ R+ ++NP++ + K C E+WKTM+ +EK K+ ++A
Sbjct: 6 PKKPKGKMSAYAFFVQTCREE-HKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAK 64
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +DR M DY K GK
Sbjct: 65 ADKVRYDREMKDYGPAK-GGK 84
>UNIPROTKB|E1BIU3 [details] [associations]
symbol:LOC532409 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 GeneTree:ENSGT00560000076717 EMBL:DAAA02004182
IPI:IPI00839111 RefSeq:XP_003585778.1 Ensembl:ENSBTAT00000044962
GeneID:532409 KEGG:bta:532409 OMA:FLENTRC ArrayExpress:E1BIU3
Uniprot:E1BIU3
Length = 186
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +A+ +F++ R+ +++NP++ + K C E+WKTM+ +EK K+ +IA
Sbjct: 6 PKKPKGKMSAYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +DR M DY K GK
Sbjct: 66 ADKVRYDREMKDYGPAK-GGK 85
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A + +
Sbjct: 93 PKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKE 151
Query: 127 EFDRAMADYIKRKENGKVENSE 148
++++ +ADY K GK + ++
Sbjct: 152 KYEKDVADY---KSKGKFDGAK 170
>RGD|1561694 [details] [associations]
symbol:RGD1561694 "similar to High mobility group protein 2
(HMG-2)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
REFSEQ:XM_003752741 Ncbi:XP_003752789
Length = 209
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 25/86 (29%), Positives = 50/86 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ + + +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +
Sbjct: 9 PRGKMSLYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDK 68
Query: 126 AEFDRAMADYIKRKENGKVENSEEDS 151
A +DR M +Y+ K N K + + ++
Sbjct: 69 ARYDREMKNYVPPKGNKKGKKKDPNA 94
Score = 108 (43.1 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY-------IKRKENG-----KVENSEEDSEFDEYE 157
++++ +A Y + +K G K +N ED E +E E
Sbjct: 154 KYEKDIAAYRAKGKSEVGKKGPGRPTGSKKKNEPEDEEEEEEE 196
>UNIPROTKB|E7EQU1 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 EMBL:AF003626 HGNC:HGNC:5004 IPI:IPI00640781
ProteinModelPortal:E7EQU1 SMR:E7EQU1 PRIDE:E7EQU1
Ensembl:ENST00000455596 ArrayExpress:E7EQU1 Bgee:E7EQU1
Uniprot:E7EQU1
Length = 193
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A + +
Sbjct: 93 PKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKE 151
Query: 127 EFDRAMADY-IKRKENG----------KVENSEEDSEFDEYE 157
++++ +ADY K K +G KVE +E+ E +E E
Sbjct: 152 KYEKDVADYKSKGKFDGAKGPAKVARKKVEEEDEEEEEEEEE 193
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +A+ +F++ R+ +++NP++ + K C E+WKTM+ +EK K+ ++A
Sbjct: 6 PKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +DR M DY K GK
Sbjct: 66 ADKVRYDREMKDYGPAK-GGK 85
>UNIPROTKB|O15347 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0008301 "DNA binding, bending" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=TAS]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0007275 GO:GO:0005634 GO:GO:0005694 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006310 GO:GO:0003690 Pfam:PF09011 HOGENOM:HOG000197861
HOVERGEN:HBG009000 OrthoDB:EOG4TTGK2 eggNOG:NOG320947 CTD:3149
KO:K11296 OMA:DNEKQPY EMBL:Y10043 EMBL:AF003626 EMBL:BC070482
IPI:IPI00217477 RefSeq:NP_005333.2 UniGene:Hs.19114 PDB:2EQZ
PDB:2YQI PDBsum:2EQZ PDBsum:2YQI ProteinModelPortal:O15347
SMR:O15347 IntAct:O15347 STRING:O15347 PhosphoSite:O15347
PaxDb:O15347 PeptideAtlas:O15347 PRIDE:O15347 DNASU:3149
Ensembl:ENST00000325307 Ensembl:ENST00000448905 GeneID:3149
KEGG:hsa:3149 UCSC:uc004fep.3 GeneCards:GC0XP150148 HGNC:HGNC:5004
MIM:300193 neXtProt:NX_O15347 PharmGKB:PA35092 InParanoid:O15347
PhylomeDB:O15347 EvolutionaryTrace:O15347 GenomeRNAi:3149
NextBio:12480 ArrayExpress:O15347 Bgee:O15347 CleanEx:HS_HMGB3
Genevestigator:O15347 GermOnline:ENSG00000029993 Uniprot:O15347
Length = 200
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A + +
Sbjct: 93 PKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKE 151
Query: 127 EFDRAMADY-IKRKENG----------KVENSEEDSEFDEYE 157
++++ +ADY K K +G KVE +E+ E +E E
Sbjct: 152 KYEKDVADYKSKGKFDGAKGPAKVARKKVEEEDEEEEEEEEE 193
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +A+ +F++ R+ +++NP++ + K C E+WKTM+ +EK K+ ++A
Sbjct: 6 PKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +DR M DY K GK
Sbjct: 66 ADKVRYDREMKDYGPAK-GGK 85
>ZFIN|ZDB-GENE-050417-290 [details] [associations]
symbol:hmgb3b "high-mobility group box 3b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
ZFIN:ZDB-GENE-050417-290 GO:GO:0005634 GO:GO:0003677 eggNOG:COG5648
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 HOGENOM:HOG000197861 HOVERGEN:HBG009000 KO:K11296
EMBL:BC093186 IPI:IPI00511002 RefSeq:NP_001017769.1
UniGene:Dr.75880 ProteinModelPortal:Q567G0 SMR:Q567G0 GeneID:550466
KEGG:dre:550466 CTD:550466 InParanoid:Q567G0 OrthoDB:EOG4TB4CM
NextBio:20879710 ArrayExpress:Q567G0 Uniprot:Q567G0
Length = 198
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +A+ YF++ R+ ++NP + + K C E+WKTM+ +EK K+ D+A + +
Sbjct: 9 PKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFEDLAKQDK 68
Query: 126 AEFDRAMADYIKRKENGK 143
A +D+ M Y K+ K
Sbjct: 69 ARYDQEMMHYNPGKKGRK 86
Score = 115 (45.5 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 27/95 (28%), Positives = 47/95 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
P++PP+ FF F + R + QNP + + + K G W ++ EK + A + +
Sbjct: 94 PRRPPSGFFLFCAEQRPIIKAQNPSL-GIGDVAKKLGGMWNNLSDSEKQPFLSNADKLKD 152
Query: 127 EFDRAMADYIKRKENG----KVENSEEDSEFDEYE 157
++ + MA Y K+ G K E ++D + DE E
Sbjct: 153 KYQKDMAFYRKKGSGGSSSAKSEPKDDDDDDDEEE 187
>MGI|MGI:96157 [details] [associations]
symbol:Hmgb2 "high mobility group box 2" species:10090 "Mus
musculus" [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0001938 "positive regulation of endothelial cell proliferation"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003684
"damaged DNA binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IC] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006288 "base-excision
repair, DNA ligation" evidence=ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007289 "spermatid
nucleus differentiation" evidence=IMP] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008289 "lipid binding"
evidence=ISO] [GO:0008301 "DNA binding, bending" evidence=ISO]
[GO:0008584 "male gonad development" evidence=IMP] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0031493
"nucleosomal histone binding" evidence=ISO] [GO:0032075 "positive
regulation of nuclease activity" evidence=ISO] [GO:0042056
"chemoattractant activity" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0043234 "protein
complex" evidence=ISO] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO;IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISO] [GO:0045648 "positive regulation
of erythrocyte differentiation" evidence=ISO] [GO:0045654 "positive
regulation of megakaryocyte differentiation" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048545 "response to steroid hormone stimulus" evidence=IMP]
[GO:0050786 "RAGE receptor binding" evidence=ISO] [GO:0050918
"positive chemotaxis" evidence=ISO] [GO:0051054 "positive
regulation of DNA metabolic process" evidence=ISO] [GO:0060326
"cell chemotaxis" evidence=ISO] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 MGI:MGI:96157 Pfam:PF00505
GO:GO:0005634 GO:GO:0048471 GO:GO:0045892 GO:GO:0043066
GO:GO:0005615 GO:GO:0043234 GO:GO:0005730 GO:GO:0003684
GO:GO:0001938 GO:GO:0045944 GO:GO:0003700 GO:GO:0071222
GO:GO:0048545 GO:GO:0008584 eggNOG:COG5648 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0007289 GO:GO:0045648 GO:GO:0045654
GO:GO:0060326 GO:GO:0000793 GO:GO:0042056 GO:GO:0043388
Pfam:PF09011 GO:GO:0032075 HOGENOM:HOG000197861 KO:K11295
GeneTree:ENSGT00560000076717 HOVERGEN:HBG009000 GO:GO:0006288
CTD:3148 OMA:KIKNDHP OrthoDB:EOG4TTGK2 EMBL:X67668 EMBL:Z46757
EMBL:AF267733 EMBL:AK003773 EMBL:AK008443 EMBL:AK012568
EMBL:AK135296 EMBL:AK135297 EMBL:AK146212 EMBL:BC002050
EMBL:BC046759 EMBL:BC083108 IPI:IPI00462291 PIR:S26062 PIR:S54774
RefSeq:NP_032278.1 UniGene:Mm.279998 UniGene:Mm.470487
UniGene:Mm.490424 ProteinModelPortal:P30681 SMR:P30681 DIP:DIP-899N
MINT:MINT-4097539 STRING:P30681 PhosphoSite:P30681 PaxDb:P30681
PRIDE:P30681 Ensembl:ENSMUST00000067925 GeneID:97165 KEGG:mmu:97165
UCSC:uc009lsx.2 InParanoid:P30681 NextBio:352589 Bgee:P30681
CleanEx:MM_HMGB2 Genevestigator:P30681
GermOnline:ENSMUSG00000054717 Uniprot:P30681
Length = 210
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 24/86 (27%), Positives = 51/86 (59%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +
Sbjct: 9 PRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDK 68
Query: 126 AEFDRAMADYIKRKENGKVENSEEDS 151
A +DR M +Y+ K + K + + ++
Sbjct: 69 ARYDREMKNYVPPKGDKKGKKKDPNA 94
Score = 102 (41.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSENRPKIKIEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY-IKRK-ENGK 143
++++ +A Y K K E GK
Sbjct: 154 KYEKDIAAYRAKGKSEAGK 172
Score = 36 (17.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 140 ENGKVENSEEDSEFDEYE 157
E+ + E EE+ E DE E
Sbjct: 188 EDEEEEEEEEEEEDDEEE 205
Score = 33 (16.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 139 KENGKVENSEEDSEFDE 155
+E + E EED E +E
Sbjct: 190 EEEEEEEEEEEDDEEEE 206
Score = 33 (16.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K + + E EE+ E D+ E
Sbjct: 184 KNEPEDEEEEEEEEEEEDDEE 204
>UNIPROTKB|E7ES08 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 EMBL:AF003626 HGNC:HGNC:5004 IPI:IPI00643317
ProteinModelPortal:E7ES08 SMR:E7ES08 PRIDE:E7ES08
Ensembl:ENST00000419110 ArrayExpress:E7ES08 Bgee:E7ES08
Uniprot:E7ES08
Length = 188
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +A+ +F++ R+ +++NP++ + K C E+WKTM+ +EK K+ ++A
Sbjct: 6 PKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +DR M DY K GK
Sbjct: 66 ADKVRYDREMKDYGPAK-GGK 85
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A + +
Sbjct: 93 PKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKE 151
Query: 127 EFDRAMADYIKRKENGKVENSE 148
++++ +ADY K GK + ++
Sbjct: 152 KYEKDVADY---KSKGKFDGAK 170
>RGD|1564519 [details] [associations]
symbol:RGD1564519 "similar to High mobility group protein 2
(HMG-2)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
REFSEQ:XM_001063065 Ncbi:XP_001063065
Length = 210
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 24/86 (27%), Positives = 51/86 (59%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +
Sbjct: 9 PRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDK 68
Query: 126 AEFDRAMADYIKRKENGKVENSEEDS 151
A +DR M +Y+ K + K + + ++
Sbjct: 69 ARYDREMKNYVPPKGDKKGKKKDPNA 94
Score = 108 (43.1 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY-------IKRKENG-----KVENSEEDSEFDEYE 157
++++ +A Y + +K G K +N ED E +E E
Sbjct: 154 KYEKDIAAYRAKGKSEVGKKGPGRPTGSKKKNEPEDEEEEEEE 196
>RGD|69291 [details] [associations]
symbol:Hmgb2 "high mobility group box 2" species:10116 "Rattus
norvegicus" [GO:0000793 "condensed chromosome" evidence=ISO;ISS]
[GO:0001938 "positive regulation of endothelial cell proliferation"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003684
"damaged DNA binding" evidence=ISO] [GO:0003690 "double-stranded DNA
binding" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005615
"extracellular space" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0006288 "base-excision repair, DNA ligation" evidence=ISO;ISS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0007049 "cell cycle" evidence=IEP]
[GO:0007283 "spermatogenesis" evidence=ISO] [GO:0007289 "spermatid
nucleus differentiation" evidence=ISO] [GO:0007399 "nervous system
development" evidence=IDA] [GO:0008289 "lipid binding" evidence=IDA]
[GO:0008301 "DNA binding, bending" evidence=ISO;ISS] [GO:0008584
"male gonad development" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0031100 "organ regeneration"
evidence=IEP] [GO:0031493 "nucleosomal histone binding"
evidence=IDA] [GO:0032075 "positive regulation of nuclease activity"
evidence=ISO] [GO:0042056 "chemoattractant activity" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043388 "positive
regulation of DNA binding" evidence=ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO] [GO:0045648 "positive
regulation of erythrocyte differentiation" evidence=ISO] [GO:0045654
"positive regulation of megakaryocyte differentiation" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;ISS]
[GO:0048545 "response to steroid hormone stimulus" evidence=ISO]
[GO:0050786 "RAGE receptor binding" evidence=ISO] [GO:0050918
"positive chemotaxis" evidence=ISO] [GO:0051054 "positive regulation
of DNA metabolic process" evidence=IMP] [GO:0060326 "cell
chemotaxis" evidence=ISO] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=ISO] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 RGD:69291
GO:GO:0005634 GO:GO:0048471 GO:GO:0045893 GO:GO:0007399
GO:GO:0031100 GO:GO:0006357 eggNOG:COG5648 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0007049 GO:GO:0008289 GO:GO:0003690 GO:GO:0000793
GO:GO:0051054 GO:GO:0031493 Pfam:PF09011 HOGENOM:HOG000197861
KO:K11295 GeneTree:ENSGT00560000076717 HOVERGEN:HBG009000
GO:GO:0006288 CTD:3148 OMA:KIKNDHP OrthoDB:EOG4TTGK2 EMBL:D84418
EMBL:BC078866 EMBL:BC089854 EMBL:BC107455 IPI:IPI00876582
RefSeq:NP_058883.1 RefSeq:XP_001063065.2 RefSeq:XP_573272.3
UniGene:Rn.218982 UniGene:Rn.2874 ProteinModelPortal:P52925
SMR:P52925 STRING:P52925 DNASU:29395 Ensembl:ENSRNOT00000017635
Ensembl:ENSRNOT00000046874 GeneID:29395 GeneID:498072 KEGG:rno:29395
KEGG:rno:498072 UCSC:RGD:69291 CTD:498072 InParanoid:P52925
NextBio:609027 Genevestigator:P52925 GermOnline:ENSRNOG00000013167
GermOnline:ENSRNOG00000030313 Uniprot:P52925
Length = 210
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 24/86 (27%), Positives = 51/86 (59%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +
Sbjct: 9 PRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDK 68
Query: 126 AEFDRAMADYIKRKENGKVENSEEDS 151
A +DR M +Y+ K + K + + ++
Sbjct: 69 ARYDREMKNYVPPKGDKKGKKKDPNA 94
Score = 108 (43.1 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY-------IKRKENG-----KVENSEEDSEFDEYE 157
++++ +A Y + +K G K +N ED E +E E
Sbjct: 154 KYEKDIAAYRAKGKSEVGKKGPGRPTGSKKKNEPEDEEEEEEE 196
>UNIPROTKB|E9PES6 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 EMBL:AF003626 HGNC:HGNC:5004 IPI:IPI00411540
ProteinModelPortal:E9PES6 SMR:E9PES6 Ensembl:ENST00000430118
ArrayExpress:E9PES6 Bgee:E9PES6 Uniprot:E9PES6
Length = 153
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +A+ +F++ R+ +++NP++ + K C E+WKTM+ +EK K+ ++A
Sbjct: 6 PKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +DR M DY K GK
Sbjct: 66 ADKVRYDREMKDYGPAK-GGK 85
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A + +
Sbjct: 93 PKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKE 151
Query: 127 EF 128
++
Sbjct: 152 KY 153
>UNIPROTKB|E1BIF8 [details] [associations]
symbol:E1BIF8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 GeneTree:ENSGT00560000076717 EMBL:DAAA02073284
IPI:IPI00728960 Ensembl:ENSBTAT00000006714 OMA:RAISEMW
Uniprot:E1BIF8
Length = 194
Score = 112 (44.5 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +F + NP I S+ + K GE W ++ +K Y + K
Sbjct: 90 PKRPPSGFFLFFSEFCSEIKSTNPGI-SIGDVAKKLGEMWNNLSDSKKQLYVN-KDAKLK 147
Query: 127 EFDRAMADYIKRKENG----------KVENSEEDSEFDE 155
++++ +ADY K + +G KVE E+ E DE
Sbjct: 148 KYEKDVADY-KGEFDGTKGPAKVVQKKVEEEEDKEEEDE 185
Score = 98 (39.6 bits), Expect = 0.00039, P = 0.00039
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +A +F++ RK ++ P + + K C E+WKTM+ +EK + ++A +
Sbjct: 9 PKGKMSAHAFFVQMCRKK-HKKTPKVPVNFAEFSKKCSERWKTMSGKEKSTFDEMAKADK 67
Query: 126 AEFDRAMADYIKRKENGKVENS 147
+++ M DY K K N+
Sbjct: 68 VHYNQEMKDYGSAKGGKKDPNA 89
Score = 34 (17.0 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1 MAKKAANEPKESQSSSASNLKMVLRK 26
MAK +PK S+ A ++M +K
Sbjct: 1 MAKGDPEKPKGKMSAHAFFVQMCRKK 26
>UNIPROTKB|E2QY30 [details] [associations]
symbol:HMGB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0060326 "cell chemotaxis"
evidence=IEA] [GO:0050786 "RAGE receptor binding" evidence=IEA]
[GO:0048545 "response to steroid hormone stimulus" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045654 "positive regulation of megakaryocyte differentiation"
evidence=IEA] [GO:0045648 "positive regulation of erythrocyte
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0042056 "chemoattractant activity"
evidence=IEA] [GO:0032075 "positive regulation of nuclease
activity" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0008301 "DNA binding, bending" evidence=IEA]
[GO:0007289 "spermatid nucleus differentiation" evidence=IEA]
[GO:0006288 "base-excision repair, DNA ligation" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0001938 "positive regulation of endothelial cell proliferation"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 GO:GO:0048471
GO:GO:0045892 GO:GO:0005615 GO:GO:0043234 GO:GO:0005730
GO:GO:0003684 GO:GO:0001938 GO:GO:0045944 GO:GO:0003700
GO:GO:0071222 GO:GO:0048545 GO:GO:0008584 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0007289 GO:GO:0045648 GO:GO:0045654
GO:GO:0060326 GO:GO:0000793 GO:GO:0042056 GO:GO:0043388
Pfam:PF09011 GO:GO:0032075 KO:K11295 GeneTree:ENSGT00560000076717
GO:GO:0006288 CTD:3148 OMA:KIKNDHP EMBL:AAEX03014309
RefSeq:XP_543194.2 Ensembl:ENSCAFT00000012535 GeneID:486068
KEGG:cfa:486068 NextBio:20859918 Uniprot:E2QY30
Length = 210
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 24/86 (27%), Positives = 51/86 (59%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +
Sbjct: 9 PRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDK 68
Query: 126 AEFDRAMADYIKRKENGKVENSEEDS 151
A +DR M +Y+ K + K + + ++
Sbjct: 69 ARYDREMKNYVPPKGDKKGKKKDPNA 94
Score = 107 (42.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY-IKRK-ENGK 143
++++ +A Y K K E GK
Sbjct: 154 KYEKDIAAYRAKGKSEAGK 172
Score = 38 (18.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 137 KRKENGKVENSEEDSEFDE 155
K+K + E EE+ E DE
Sbjct: 182 KKKNEPEDEEEEEEEEEDE 200
Score = 36 (17.7 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 140 ENGKVENSEEDSEFDEYE 157
E+ + E EE+ E DE E
Sbjct: 188 EDEEEEEEEEEDEDDEEE 205
>UNIPROTKB|P17741 [details] [associations]
symbol:HMGB2 "High mobility group protein B2" species:9823
"Sus scrofa" [GO:0006265 "DNA topological change" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0008301 "DNA binding,
bending" evidence=ISS;IDA] [GO:0051103 "DNA ligation involved in
DNA repair" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0000793 "condensed chromosome" evidence=ISS] [GO:0006288
"base-excision repair, DNA ligation" evidence=ISS]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0005634 GO:GO:0048471 GO:GO:0006357 eggNOG:COG5648
GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0000793 Pfam:PF09011 GO:GO:0006265
HOGENOM:HOG000197861 KO:K11295 HOVERGEN:HBG009000 GO:GO:0006288
CTD:3148 OrthoDB:EOG4TTGK2 EMBL:J02895 PIR:A34719
RefSeq:NP_999228.1 UniGene:Ssc.226 PDB:1J3C PDB:1J3D PDB:1J3X
PDBsum:1J3C PDBsum:1J3D PDBsum:1J3X ProteinModelPortal:P17741
SMR:P17741 GeneID:397130 KEGG:ssc:397130 EvolutionaryTrace:P17741
Uniprot:P17741
Length = 210
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 24/86 (27%), Positives = 51/86 (59%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +
Sbjct: 9 PRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDK 68
Query: 126 AEFDRAMADYIKRKENGKVENSEEDS 151
A +DR M +Y+ K + K + + ++
Sbjct: 69 ARYDREMKNYVPPKGDKKGKKKDPNA 94
Score = 107 (42.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY-IKRK-ENGK 143
++++ +A Y K K E GK
Sbjct: 154 KYEKDIAAYRAKGKGEAGK 172
Score = 40 (19.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+K + E EE+ E DE E
Sbjct: 182 KKKNEPEDEEEEEEEEEDEDE 202
Score = 33 (16.7 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K + + E EE+ + DE E
Sbjct: 184 KNEPEDEEEEEEEEEDEDEEE 204
>UNIPROTKB|P40673 [details] [associations]
symbol:HMGB2 "High mobility group protein B2" species:9913
"Bos taurus" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0000793 "condensed chromosome" evidence=ISS]
[GO:0008301 "DNA binding, bending" evidence=ISS;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0006288 "base-excision repair, DNA ligation"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0033151 "V(D)J recombination" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0042393
"histone binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0006265 "DNA topological change"
evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0006310 "DNA recombination" evidence=IDA]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA]
[GO:0060326 "cell chemotaxis" evidence=IEA] [GO:0050786 "RAGE
receptor binding" evidence=IEA] [GO:0048545 "response to steroid
hormone stimulus" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045654 "positive regulation of megakaryocyte
differentiation" evidence=IEA] [GO:0045648 "positive regulation of
erythrocyte differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0042056
"chemoattractant activity" evidence=IEA] [GO:0032075 "positive
regulation of nuclease activity" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IEA] [GO:0008584 "male gonad
development" evidence=IEA] [GO:0007289 "spermatid nucleus
differentiation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001938 "positive
regulation of endothelial cell proliferation" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0005634 GO:GO:0048471 GO:GO:0045892 GO:GO:0005615
GO:GO:0043234 GO:GO:0005730 GO:GO:0003684 GO:GO:0001938
GO:GO:0045944 GO:GO:0003700 GO:GO:0006357 GO:GO:0071222
GO:GO:0048545 GO:GO:0008584 GO:GO:0006338 eggNOG:COG5648
GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0007289 GO:GO:0003690
GO:GO:0003697 GO:GO:0045648 GO:GO:0045654 GO:GO:0060326
GO:GO:0042393 GO:GO:0000793 GO:GO:0042056 GO:GO:0043388
Pfam:PF09011 GO:GO:0032075 GO:GO:0033151 GO:GO:0006265
HOGENOM:HOG000197861 KO:K11295 GeneTree:ENSGT00560000076717
HOVERGEN:HBG009000 GO:GO:0006288 EMBL:BC109755 IPI:IPI00689856
RefSeq:NP_001032705.1 UniGene:Bt.6397 ProteinModelPortal:P40673
SMR:P40673 STRING:P40673 PRIDE:P40673 Ensembl:ENSBTAT00000020096
GeneID:540444 KEGG:bta:540444 CTD:3148 InParanoid:P40673
OMA:KIKNDHP OrthoDB:EOG4TTGK2 NextBio:20878641 Uniprot:P40673
Length = 209
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 24/86 (27%), Positives = 51/86 (59%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +
Sbjct: 9 PRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDK 68
Query: 126 AEFDRAMADYIKRKENGKVENSEEDS 151
A +DR M +Y+ K + K + + ++
Sbjct: 69 ARYDREMKNYVPPKGDKKGKKKDPNA 94
Score = 107 (42.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY-IKRK-ENGK 143
++++ +A Y K K E GK
Sbjct: 154 KYEKDIAAYRAKGKSEAGK 172
Score = 35 (17.4 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+ E E EE+ + DE E
Sbjct: 183 KKNEPEDEEEEEEEEDEDEEE 203
>UNIPROTKB|P26583 [details] [associations]
symbol:HMGB2 "High mobility group protein B2" species:9606
"Homo sapiens" [GO:0007289 "spermatid nucleus differentiation"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0048545 "response to steroid hormone stimulus" evidence=IEA]
[GO:0048015 "phosphatidylinositol-mediated signaling" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=NAS]
[GO:0008301 "DNA binding, bending" evidence=IDA] [GO:0006334
"nucleosome assembly" evidence=NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0006288
"base-excision repair, DNA ligation" evidence=IDA] [GO:0001938
"positive regulation of endothelial cell proliferation"
evidence=IDA] [GO:0042056 "chemoattractant activity" evidence=IDA]
[GO:0060326 "cell chemotaxis" evidence=IDA] [GO:0050786 "RAGE
receptor binding" evidence=IGI] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003677 "DNA
binding" evidence=IMP] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IEP] [GO:0051103 "DNA ligation involved in DNA repair"
evidence=ISS] [GO:0006265 "DNA topological change" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0032075 "positive
regulation of nuclease activity" evidence=IDA] [GO:0033151 "V(D)J
recombination" evidence=ISS] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=IDA] [GO:0045648 "positive regulation of
erythrocyte differentiation" evidence=IMP] [GO:0045654 "positive
regulation of megakaryocyte differentiation" evidence=IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0006921 "cellular component
disassembly involved in execution phase of apoptosis" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0050918 "positive chemotaxis" evidence=IDA]
Reactome:REACT_578 InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0048471 GO:GO:0045892
GO:GO:0005615 GO:GO:0043234 GO:GO:0005654 GO:GO:0003684
GO:GO:0001938 GO:GO:0045944 GO:GO:0003700 GO:GO:0071222
GO:GO:0048545 GO:GO:0008584 eggNOG:COG5648 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0007289 GO:GO:0003690 GO:GO:0003697
EMBL:CH471056 GO:GO:0045648 GO:GO:0045654 GO:GO:0048015
GO:GO:0060326 GO:GO:0006309 GO:GO:0000793 GO:GO:0042056
GO:GO:0006334 GO:GO:0043388 Pfam:PF09011 GO:GO:0032075
GO:GO:0033151 GO:GO:0006265 HOGENOM:HOG000197861 KO:K11295
HOVERGEN:HBG009000 GO:GO:0006288 HPA:HPA003506 GO:GO:0050786
CTD:3148 OMA:KIKNDHP OrthoDB:EOG4TTGK2 EMBL:M83665 EMBL:X62534
EMBL:BT019782 EMBL:AK311864 EMBL:BC001063 EMBL:BC100019 EMBL:Z17240
IPI:IPI00219097 PIR:A42425 PIR:S30221 RefSeq:NP_001124160.1
RefSeq:NP_001124161.1 RefSeq:NP_002120.1 UniGene:Hs.434953
ProteinModelPortal:P26583 SMR:P26583 IntAct:P26583 MINT:MINT-240190
STRING:P26583 PhosphoSite:P26583 DMDM:123374 PaxDb:P26583
PeptideAtlas:P26583 PRIDE:P26583 DNASU:3148 Ensembl:ENST00000296503
Ensembl:ENST00000438704 Ensembl:ENST00000446922 GeneID:3148
KEGG:hsa:3148 UCSC:uc003ita.3 GeneCards:GC04M174252 HGNC:HGNC:5000
MIM:163906 neXtProt:NX_P26583 PharmGKB:PA35091 InParanoid:P26583
ChiTaRS:HMGB2 GenomeRNAi:3148 NextBio:12476 PMAP-CutDB:P26583
ArrayExpress:P26583 Bgee:P26583 CleanEx:HS_HMGB2
Genevestigator:P26583 GermOnline:ENSG00000164104 Uniprot:P26583
Length = 209
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 24/86 (27%), Positives = 51/86 (59%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +
Sbjct: 9 PRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDK 68
Query: 126 AEFDRAMADYIKRKENGKVENSEEDS 151
A +DR M +Y+ K + K + + ++
Sbjct: 69 ARYDREMKNYVPPKGDKKGKKKDPNA 94
Score = 107 (42.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY-IKRK-ENGK 143
++++ +A Y K K E GK
Sbjct: 154 KYEKDIAAYRAKGKSEAGK 172
Score = 35 (17.4 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+ E E EE+ + DE E
Sbjct: 183 KKNEPEDEEEEEEEEDEDEEE 203
>RGD|1559962 [details] [associations]
symbol:RGD1559962 "similar to High mobility group protein 2
(HMG-2)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
REFSEQ:XM_001074365 Ncbi:XP_001074365
Length = 209
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 24/86 (27%), Positives = 50/86 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ +F++ R+ + ++PD + K C E+WKTM+ +EK K+ D+A +
Sbjct: 9 PRGKMSSYAFFVQTCREEHKNKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDK 68
Query: 126 AEFDRAMADYIKRKENGKVENSEEDS 151
A +DR M +Y+ K + K + + ++
Sbjct: 69 ARYDREMKNYVPPKGDKKGKKKDPNA 94
Score = 112 (44.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/103 (29%), Positives = 51/103 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY-------IKRKENG-----KVENSEEDSEFDEYE 157
E+++ +A Y + +K G K +N ED E +E E
Sbjct: 154 EYEKDIAAYRAKGKSEVGKKGPGRPTGSKKKNEPEDEEEEEEE 196
>UNIPROTKB|D6R9A6 [details] [associations]
symbol:HMGB2 "High mobility group protein B2" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007289 "spermatid nucleus
differentiation" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048545
"response to steroid hormone stimulus" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 GO:GO:0045944 GO:GO:0048545
GO:GO:0008584 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0007289 GO:GO:0043388 Pfam:PF09011
HOGENOM:HOG000197861 HGNC:HGNC:5000 ChiTaRS:HMGB2 EMBL:AC097534
IPI:IPI00967671 ProteinModelPortal:D6R9A6 SMR:D6R9A6
Ensembl:ENST00000506267 ArrayExpress:D6R9A6 Bgee:D6R9A6
Uniprot:D6R9A6
Length = 134
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 24/86 (27%), Positives = 51/86 (59%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +
Sbjct: 9 PRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDK 68
Query: 126 AEFDRAMADYIKRKENGKVENSEEDS 151
A +DR M +Y+ K + K + + ++
Sbjct: 69 ARYDREMKNYVPPKGDKKGKKKDPNA 94
>ZFIN|ZDB-GENE-030131-341 [details] [associations]
symbol:hmgb1a "high-mobility group box 1a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0009409 "response to cold"
evidence=IDA] [GO:0030900 "forebrain development" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
ZFIN:ZDB-GENE-030131-341 GO:GO:0005886 GO:GO:0005634 GO:GO:0003677
GO:GO:0009409 GO:GO:0030900 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Pfam:PF09011 HSSP:P07155
HOVERGEN:HBG009000 EMBL:BC045917 IPI:IPI00489314 UniGene:Dr.150247
UniGene:Dr.158952 ProteinModelPortal:Q7ZVC6 SMR:Q7ZVC6 PRIDE:Q7ZVC6
ArrayExpress:Q7ZVC6 Bgee:Q7ZVC6 Uniprot:Q7ZVC6
Length = 205
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 32/94 (34%), Positives = 50/94 (53%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F +FR +E+ P + S+ + K GE W ++ EEK Y A + +
Sbjct: 94 PKRPPSAFFIFCSEFRPKVKEETPGL-SIGDVAKRLGEMWNKISSEEKQPYEKKAAKLKE 152
Query: 127 EFDRAMADY-IKRKENGKVEN--SEEDSEFDEYE 157
++++ +A Y K K G S+ D DE E
Sbjct: 153 KYEKDIAAYRSKGKVGGGAAKAPSKPDKANDEDE 186
Score = 123 (48.4 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 24/78 (30%), Positives = 46/78 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A +
Sbjct: 8 PRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKLDK 67
Query: 126 AEFDRAMADYIKRKENGK 143
A ++R M +YI K K
Sbjct: 68 ARYEREMKNYIPPKGEKK 85
>UNIPROTKB|D4A9T3 [details] [associations]
symbol:D4A9T3 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Pfam:PF09011 OrthoDB:EOG4KWJV1
GeneTree:ENSGT00560000076717 IPI:IPI00564375
Ensembl:ENSRNOT00000044787 Uniprot:D4A9T3
Length = 184
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 109 (43.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 20/69 (28%), Positives = 39/69 (56%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>UNIPROTKB|J9P699 [details] [associations]
symbol:HMGB1 "High mobility group protein B1" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Pfam:PF09011 GeneTree:ENSGT00560000076717
EMBL:AAEX03014229 EMBL:AAEX03014230 Ensembl:ENSCAFT00000046727
Uniprot:J9P699
Length = 196
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 101 (40.6 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDR 130
++++
Sbjct: 154 KYEK 157
>UNIPROTKB|Q5T7C4 [details] [associations]
symbol:HMGB1 "High mobility group protein B1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 HOVERGEN:HBG009000 EMBL:AL353648 UniGene:Hs.434102
UniGene:Hs.593339 UniGene:Hs.596078 UniGene:Hs.741195
HGNC:HGNC:4983 ChiTaRS:HMGB1 EMBL:AL138681 IPI:IPI00644653
SMR:Q5T7C4 Ensembl:ENST00000326004 Ensembl:ENST00000399489
UCSC:uc001usv.3 Uniprot:Q5T7C4
Length = 158
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 101 (40.6 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 153
Query: 127 EFDR 130
++++
Sbjct: 154 KYEK 157
>UNIPROTKB|Q5T7C6 [details] [associations]
symbol:HMGB1 "High mobility group protein B1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 HOGENOM:HOG000197861 HOVERGEN:HBG009000 EMBL:AL353648
UniGene:Hs.434102 UniGene:Hs.593339 UniGene:Hs.596078
UniGene:Hs.741195 HGNC:HGNC:4983 ChiTaRS:HMGB1 EMBL:AL138681
IPI:IPI00645948 SMR:Q5T7C6 MINT:MINT-1373108
Ensembl:ENST00000426225 Uniprot:Q5T7C6
Length = 162
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
Score = 96 (38.9 bits), Expect = 0.00041, P = 0.00041
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y I
Sbjct: 95 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKI 147
>UNIPROTKB|Q5T7C0 [details] [associations]
symbol:HMGB1 "High mobility group protein B1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0001654
"eye development" evidence=IEA] [GO:0005125 "cytokine activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0010858 "calcium-dependent protein kinase
regulator activity" evidence=IEA] [GO:0030295 "protein kinase
activator activity" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0045639 "positive regulation of myeloid cell differentiation"
evidence=IEA] [GO:0045819 "positive regulation of glycogen
catabolic process" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0051384 "response to glucocorticoid stimulus" evidence=IEA]
[GO:2000426 "negative regulation of apoptotic cell clearance"
evidence=IEA] InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353
GO:GO:0005634 GO:GO:0005737 GO:GO:0005615 GO:GO:0003677
GO:GO:0030324 GO:GO:0045944 GO:GO:0051384 GO:GO:0043005
GO:GO:0045860 GO:GO:0030295 eggNOG:COG5648 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0045819
GO:GO:0001654 Pfam:PF09011 GO:GO:0045639 EMBL:AL353648
UniGene:Hs.434102 UniGene:Hs.593339 UniGene:Hs.596078
UniGene:Hs.741195 HGNC:HGNC:4983 ChiTaRS:HMGB1 GO:GO:0010858
GO:GO:2000426 EMBL:AL138681 IPI:IPI00643746 SMR:Q5T7C0
Ensembl:ENST00000398908 Uniprot:Q5T7C0
Length = 97
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
>UNIPROTKB|Q8WW32 [details] [associations]
symbol:HMGB4 "High mobility group protein B4" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR009071 PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634
GO:GO:0005694 GO:GO:0003677 EMBL:CH471059 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Pfam:PF09011
EMBL:AL121980 HOGENOM:HOG000197861 HOVERGEN:HBG009000 CTD:127540
KO:K11297 OMA:RYQEEMM EMBL:DQ207367 EMBL:AK311985 EMBL:BC021180
IPI:IPI00815726 RefSeq:NP_660206.2 UniGene:Hs.568628
UniGene:Hs.667683 HSSP:P17741 ProteinModelPortal:Q8WW32 SMR:Q8WW32
PhosphoSite:Q8WW32 DMDM:74730920 PRIDE:Q8WW32 DNASU:127540
Ensembl:ENST00000519684 Ensembl:ENST00000522796 GeneID:127540
KEGG:hsa:127540 GeneCards:GC01P034326 HGNC:HGNC:24954 HPA:HPA035699
neXtProt:NX_Q8WW32 InParanoid:Q8WW32 PhylomeDB:Q8WW32 NextBio:82109
Bgee:Q8WW32 CleanEx:HS_HMGB4 Genevestigator:Q8WW32 Uniprot:Q8WW32
Length = 186
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 126 AEFDRAMADYI-KRKENGKVENSE 148
A + M +Y+ KRK+ K + E
Sbjct: 69 ARYQEEMMNYVGKRKKRRKRDPQE 92
>UNIPROTKB|D4A2L7 [details] [associations]
symbol:D4A2L7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Pfam:PF09011 IPI:IPI00948102
Ensembl:ENSRNOT00000030194 ArrayExpress:D4A2L7 Uniprot:D4A2L7
Length = 135
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRK 139
+A ++R M YI K
Sbjct: 66 ADKARYEREMKTYIPPK 82
>ZFIN|ZDB-GENE-030131-8480 [details] [associations]
symbol:hmgb1b "high-mobility group box 1b"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
ZFIN:ZDB-GENE-030131-8480 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 HOGENOM:HOG000197861 GeneTree:ENSGT00560000076717
HOVERGEN:HBG009000 eggNOG:NOG320947 EMBL:AL929092 EMBL:BC146744
IPI:IPI00854267 UniGene:Dr.47534 SMR:A6H8T4
Ensembl:ENSDART00000108983 NextBio:20932104 Uniprot:A6H8T4
Length = 165
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
P+KP +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 5 PRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64
Query: 123 EKRAEFDRAMADYIKRK-EN 141
+ + ++R M +YI K EN
Sbjct: 65 QDKVRYEREMKNYIPPKGEN 84
>RGD|2319567 [details] [associations]
symbol:LOC100361707 "Ac2-008-like" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 RGD:2319567 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 GeneTree:ENSGT00560000076717 EMBL:AC128270
IPI:IPI00382302 Ensembl:ENSRNOT00000047163 ArrayExpress:F1LNG6
Uniprot:F1LNG6
Length = 219
Score = 129 (50.5 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 134 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 193
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 194 ADKARYEREMKTYIPPKGETK 214
>UNIPROTKB|F1MF42 [details] [associations]
symbol:LOC618297 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 GeneTree:ENSGT00560000076717 EMBL:DAAA02009820
IPI:IPI00687888 Ensembl:ENSBTAT00000027565 OMA:INTCREE
Uniprot:F1MF42
Length = 196
Score = 116 (45.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 22/71 (30%), Positives = 42/71 (59%)
Query: 82 RKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKE 140
R+ ++++PD + K C E+WKTM+ +EK K+ D+A +A +DR M +Y+ K
Sbjct: 13 REEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKG 72
Query: 141 NGKVENSEEDS 151
+ K + + ++
Sbjct: 73 DKKGKKKDPNA 83
Score = 107 (42.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 84 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 142
Query: 127 EFDRAMADY-IKRK-ENGK 143
++++ +A Y K K E GK
Sbjct: 143 KYEKDIAAYRAKGKSEAGK 161
Score = 35 (17.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+ E E EE+ + DE E
Sbjct: 172 KKNEPEDEEEEEEEEDEDEEE 192
>MGI|MGI:1916567 [details] [associations]
symbol:Hmgb4 "high-mobility group box 4" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR009071 PROSITE:PS00353 MGI:MGI:1916567 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Pfam:PF09011
GeneTree:ENSGT00560000076898 HOGENOM:HOG000197861
HOVERGEN:HBG009000 CTD:127540 KO:K11297 OMA:RYQEEMM
OrthoDB:EOG4255TS HSSP:P17741 EMBL:AK005588 EMBL:BC061030
IPI:IPI00118961 RefSeq:NP_081312.2 UniGene:Mm.331893
ProteinModelPortal:Q6P8W9 SMR:Q6P8W9 PhosphoSite:Q6P8W9
PRIDE:Q6P8W9 Ensembl:ENSMUST00000053830 GeneID:69317 KEGG:mmu:69317
eggNOG:NOG288392 InParanoid:Q6P8W9 NextBio:329122 Bgee:Q6P8W9
CleanEx:MM_HMGB4 Genevestigator:Q6P8W9 Uniprot:Q6P8W9
Length = 181
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +F+ +FR F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 9 PKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAELDK 68
Query: 126 AEFDRAMADYI-KRKENGK 143
A + + M +YI KR++ K
Sbjct: 69 ARYQQEMMNYIGKRRKRRK 87
Score = 102 (41.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
P+KPP++F F D +++NPD ++ + KA G+ W T EK Y A RA
Sbjct: 93 PRKPPSSFLLFSRDHYAMLKQENPDWTVVQ-VAKAAGKMWSTTDEAEKKPYEQKAALMRA 151
Query: 127 EFDRAMADYIKRKENGKVENSEEDSE 152
++ Y + + G+ N E ++
Sbjct: 152 KYFEEQEAY-RNQCQGRKGNFLESAK 176
>ASPGD|ASPL0000037691 [details] [associations]
symbol:AN2885 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008301 "DNA binding, bending" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0070898 "RNA
polymerase III transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005694 GO:GO:0006355 GO:GO:0043565 GO:GO:0006281
EMBL:BN001306 GO:GO:0006338 eggNOG:COG5648 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:AACD01000051 GO:GO:0031491 HOGENOM:HOG000197861 GO:GO:0051123
GO:GO:0032301 OMA:FFANDNR OrthoDB:EOG4S7P0P GO:GO:0034724
GO:GO:0070898 RefSeq:XP_660489.1 ProteinModelPortal:Q5B995
SMR:Q5B995 STRING:Q5B995 EnsemblFungi:CADANIAT00010204
GeneID:2874036 KEGG:ani:AN2885.2 Uniprot:Q5B995
Length = 106
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+ +A+ +F D R +E+NP I S +GK GEKWK+++ +E+ Y D A +
Sbjct: 27 PKRGLSAYMFFANDNRDKVREENPGI-SFGQVGKMLGEKWKSLSDKERKPYEDKAAADKK 85
Query: 127 EFDRAMADYIKRKENGKVENSEEDS 151
++ A Y + G+ E EE S
Sbjct: 86 RYEDEKAAY----KAGEAEEDEESS 106
>UNIPROTKB|P0C6E5 [details] [associations]
symbol:P0C6E5 "Putative high mobility group protein B3-like
protein" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0005694
GO:GO:0003677 eggNOG:COG5648 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:AC067852 Pfam:PF09011
IPI:IPI00888935 ProteinModelPortal:P0C6E5 SMR:P0C6E5 STRING:P0C6E5
PhosphoSite:P0C6E5 DMDM:205539816 PaxDb:P0C6E5 PRIDE:P0C6E5
neXtProt:NX_P0C6E5 InParanoid:P0C6E5 PhylomeDB:P0C6E5
Genevestigator:P0C6E5 Uniprot:P0C6E5
Length = 187
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +A+ +F++ R+ +++NP + + K C E+WKTM+ +EK K+ ++A
Sbjct: 6 PKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ +D+ + DY K GK
Sbjct: 66 ADKVHYDQEIKDYGPAK-GGK 85
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 31/97 (31%), Positives = 47/97 (48%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +F + NP I + + K GE WK + EK Y A + +
Sbjct: 92 PKRPPSGFFLFCSEFCPKSKSTNPGIP-IGDVAKKLGEMWKNLNDSEKQPYITQAAKLKE 150
Query: 127 EFDRAMADY-IKRKENG----------KVENSEEDSE 152
++++ +A Y K K +G KVE +ED E
Sbjct: 151 KYEKDVAVYKSKGKSDGAKGPAKVAQKKVEEEDEDEE 187
>RGD|1594733 [details] [associations]
symbol:LOC690521 "similar to High mobility group protein 1
(HMG-1) (High mobility group protein B1) (Amphoterin)
(Heparin-binding protein p30)" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] REFSEQ:XM_001074673 Ncbi:XP_001074673
Length = 213
Score = 124 (48.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WK M+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKAMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
>UNIPROTKB|Q32L34 [details] [associations]
symbol:HMGB4 "High mobility group protein B4" species:9913
"Bos taurus" [GO:0005694 "chromosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR009071 PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634
GO:GO:0005694 GO:GO:0003677 eggNOG:COG5648 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Pfam:PF09011
GeneTree:ENSGT00560000076898 HOGENOM:HOG000197861
HOVERGEN:HBG009000 EMBL:BC109790 IPI:IPI00760422
RefSeq:NP_001035652.1 UniGene:Bt.54197 ProteinModelPortal:Q32L34
Ensembl:ENSBTAT00000000438 GeneID:539195 KEGG:bta:539195 CTD:127540
InParanoid:Q32L34 KO:K11297 OMA:RYQEEMM OrthoDB:EOG4255TS
NextBio:20877839 Uniprot:Q32L34
Length = 194
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 9 PKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 126 AEFDRAMADYI-KRKENGK 143
A + M +Y +RK+ K
Sbjct: 69 ARYQEEMMNYFGRRKKRRK 87
>UNIPROTKB|F1LZ54 [details] [associations]
symbol:F1LZ54 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Pfam:PF09011 IPI:IPI00765905
Ensembl:ENSRNOT00000045990 Uniprot:F1LZ54
Length = 160
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 22/72 (30%), Positives = 43/72 (59%)
Query: 73 AFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRA 131
++ +F++ +++ ++++PD + K C E+WKTM+ +EK K+ D+A +A ++R
Sbjct: 15 SYAFFVQAYQEEHKKKHPDSSVNFSEFSKKCSERWKTMSAKEKGKFEDVAKADKAHYERE 74
Query: 132 MADYIKRKENGK 143
M YI K K
Sbjct: 75 MKTYISPKGETK 86
>RGD|1563668 [details] [associations]
symbol:RGD1563668 "similar to High mobility group protein 1
(HMG-1)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
REFSEQ:XM_001074778 Ncbi:XP_001074778
Length = 211
Score = 122 (48.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 67 PKK---PPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKK +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYISPKGETK 86
Score = 115 (45.5 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK PP+AFF F ++R + ++P + S+ + K GE W ++K Y +A + +
Sbjct: 95 PKTPPSAFFLFCSEYRPKIKGEHPGL-SIGDVVKKLGEMWTNTAADDKQPYEKMAAKLKE 153
Query: 127 EFDRAMADY------------IKRKENGKVENSEEDSEFDE 155
++++ +A Y + + E K + EED E DE
Sbjct: 154 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 194
>SGD|S000004676 [details] [associations]
symbol:ABF2 "Mitochondrial DNA-binding protein" species:4932
"Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0090139
"mitochondrial DNA packaging" evidence=IMP] [GO:0000001
"mitochondrion inheritance" evidence=IMP] [GO:0000002
"mitochondrial genome maintenance" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0000262 "mitochondrial chromosome"
evidence=IDA] [GO:0008301 "DNA binding, bending" evidence=IDA]
[GO:0042645 "mitochondrial nucleoid" evidence=IDA]
InterPro:IPR009071 SGD:S000004676 Pfam:PF00505 GO:GO:0005634
EMBL:M73753 EMBL:AJ223169 EMBL:Z48952 EMBL:AY557967 EMBL:BK006946
PIR:A41302 RefSeq:NP_013788.1 ProteinModelPortal:Q02486 SMR:Q02486
DIP:DIP-5492N IntAct:Q02486 MINT:MINT-505363 STRING:Q02486
PaxDb:Q02486 PeptideAtlas:Q02486 EnsemblFungi:YMR072W GeneID:855094
KEGG:sce:YMR072W CYGD:YMR072w eggNOG:COG5648
GeneTree:ENSGT00680000100562 OMA:FHESSKP OrthoDB:EOG483HF0
NextBio:978405 Genevestigator:Q02486 GermOnline:YMR072W
GO:GO:0000262 GO:GO:0008301 GO:GO:0090139 GO:GO:0000001
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Uniprot:Q02486
Length = 183
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 22/69 (31%), Positives = 40/69 (57%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+F +L+D R F ++NP ++ I K GEKW+ + + K KY + +
Sbjct: 43 PKRPTSAYFLYLQDHRSQFVKENPTLRPAE-ISKIAGEKWQNLEADIKEKYISERKKLYS 101
Query: 127 EFDRAMADY 135
E+ +A ++
Sbjct: 102 EYQKAKKEF 110
>CGD|CAF0007020 [details] [associations]
symbol:NHP6A species:5476 "Candida albicans" [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0032301 "MutSalpha complex"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0034724 "DNA replication-independent nucleosome organization"
evidence=IEA] [GO:0070898 "RNA polymerase III transcriptional
preinitiation complex assembly" evidence=IEA] [GO:0051123 "RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] InterPro:IPR009071
CGD:CAF0007020 Pfam:PF00505 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0003677 GO:GO:0006281 GO:GO:0006351
eggNOG:COG5648 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 EMBL:AACQ01000005 EMBL:AACQ01000006 EMBL:AF196333
ProteinModelPortal:Q9UVL1 SMR:Q9UVL1 STRING:Q9UVL1 Uniprot:Q9UVL1
Length = 92
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+ +A+ +F + R + +NP I S +GK GEKWK + E+K+ Y + A +
Sbjct: 19 PKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKALNSEDKLPYENKAEADKK 77
Query: 127 EFDRAMADYIKR 138
+++ A+Y K+
Sbjct: 78 RYEKEKAEYAKK 89
>UNIPROTKB|Q9UVL1 [details] [associations]
symbol:NHP6 "Non-histone chromosomal protein 6"
species:237561 "Candida albicans SC5314" [GO:0003677 "DNA binding"
evidence=IDA] InterPro:IPR009071 CGD:CAF0007020 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0006355 GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 eggNOG:COG5648 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 EMBL:AACQ01000005
EMBL:AACQ01000006 EMBL:AF196333 ProteinModelPortal:Q9UVL1
SMR:Q9UVL1 STRING:Q9UVL1 Uniprot:Q9UVL1
Length = 92
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+ +A+ +F + R + +NP I S +GK GEKWK + E+K+ Y + A +
Sbjct: 19 PKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKALNSEDKLPYENKAEADKK 77
Query: 127 EFDRAMADYIKR 138
+++ A+Y K+
Sbjct: 78 RYEKEKAEYAKK 89
>UNIPROTKB|P07156 [details] [associations]
symbol:HMGB1 "High mobility group protein B1" species:10029
"Cricetulus griseus" [GO:0000793 "condensed chromosome"
evidence=ISS] [GO:0006288 "base-excision repair, DNA ligation"
evidence=ISS] [GO:0017055 "negative regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=ISS]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000793 Pfam:PF09011
GO:GO:0017055 HOVERGEN:HBG009000 GO:GO:0006288 EMBL:Y00365
PIR:A27853 PDB:1HSM PDB:1HSN PDB:1NHM PDB:1NHN PDBsum:1HSM
PDBsum:1HSN PDBsum:1NHM PDBsum:1NHN ProteinModelPortal:P07156
SMR:P07156 PRIDE:P07156 EvolutionaryTrace:P07156 Uniprot:P07156
Length = 180
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A + +
Sbjct: 60 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 118
Query: 127 EFDRAMADY------------IKRKENGKVENSEEDSEFDE 155
++++ +A Y + + E K + EED E DE
Sbjct: 119 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 159
Score = 99 (39.9 bits), Expect = 0.00016, P = 0.00016
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGK 143
K C E+WKTM+ +EK K+ D+A +A ++R M YI K K
Sbjct: 8 KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 51
>UNIPROTKB|F1M1H9 [details] [associations]
symbol:F1M1H9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Pfam:PF09011 IPI:IPI00949462
Ensembl:ENSRNOT00000052187 Uniprot:F1M1H9
Length = 179
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 27/90 (30%), Positives = 51/90 (56%)
Query: 67 PKKPP---TAFF-YFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
PKKP ++++ +F++ R+ ++++ D + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYYAFFVQTCREEHKKKHWDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 65
Query: 122 TEKRAEFDRAMADYIKRKENGKVENSEEDS 151
+A ++R M YI K K + + D+
Sbjct: 66 KADKARYEREMKTYIPPKGETKKKFKDPDA 95
>TAIR|locus:2128504 [details] [associations]
symbol:3xHMG-box2 "3xHigh Mobility Group-box2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006084 "acetyl-CoA metabolic process"
evidence=RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0016572
"histone phosphorylation" evidence=RCA] [GO:0042127 "regulation of
cell proliferation" evidence=RCA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 EMBL:AL161560 EMBL:AL035394 HSSP:P07155
HOGENOM:HOG000238964 KO:K09273 ProtClustDB:CLSN2686000
EMBL:AY074353 EMBL:AY096398 EMBL:AY125491 IPI:IPI00533790
PIR:T05612 RefSeq:NP_194111.1 UniGene:At.2572 UniGene:At.71059
ProteinModelPortal:Q9SUP7 SMR:Q9SUP7 STRING:Q9SUP7 PaxDb:Q9SUP7
PRIDE:Q9SUP7 EnsemblPlants:AT4G23800.1 GeneID:828480
KEGG:ath:AT4G23800 TAIR:At4g23800 eggNOG:NOG327891
InParanoid:Q9SUP7 OMA:FCNERRA PhylomeDB:Q9SUP7
Genevestigator:Q9SUP7 Uniprot:Q9SUP7
Length = 456
Score = 125 (49.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 25/86 (29%), Positives = 47/86 (54%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK P +AF + + R +E+N KS+ + K GE+WK ++ ++K Y +A + +
Sbjct: 255 PKHPVSAFLVYANERRAALREEN---KSVVEVAKITGEEWKNLSDKKKAPYEKVAKKNKE 311
Query: 127 EFDRAMADYIKRKENGKVENSEEDSE 152
+ +AM +Y + KE + +E+ E
Sbjct: 312 TYLQAMEEYKRTKEEEALSQKKEEEE 337
>DICTYBASE|DDB_G0270260 [details] [associations]
symbol:nhp6 "HMG1/2 (high mobility group)
box-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR009071 dictyBase:DDB_G0270260 Pfam:PF00505
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006357 GO:GO:0006351 GO:GO:0003682
eggNOG:COG5648 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0000790 GO:GO:0006325 HSSP:P63159
RefSeq:XP_646657.1 ProteinModelPortal:Q55C24 STRING:Q55C24
EnsemblProtists:DDB0216420 GeneID:8617629 KEGG:ddi:DDB_G0270260
OMA:ERVKNAN Uniprot:Q55C24
Length = 141
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 39/150 (26%), Positives = 67/150 (44%)
Query: 5 AANEPKESQSSSASNLKMVLRKRPTRHSVVAAVGIEKEGKSISAXXXXXXXXXXXXXXXX 64
+++E S S S +K K+P + V+ G +KEGK
Sbjct: 3 SSDESGSSSSESEKKVKKTPVKKPKKEPKVSKKG-KKEGKKTKKKPKDENA--------- 52
Query: 65 XMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE- 123
P++ + F +F +D R + +P+ S IG G++W ++ E+K KY +A E
Sbjct: 53 --PRRYLSPFIFFSKDHRSVIKNSHPNC-SFGEIGSLLGQEWAKISAEDKKKYEKLAAED 109
Query: 124 -KRAEFDRAMADYIKRKENGKVENSEEDSE 152
KR E ++ D K K + E+S + S+
Sbjct: 110 KKRWELEKKNYDE-KLKTQSQAESSSDSSD 138
>RGD|2319002 [details] [associations]
symbol:LOC100365478 "high-mobility group box 1-like"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
RGD:2319002 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Pfam:PF09011
IPI:IPI00958625 Ensembl:ENSRNOT00000062071 Uniprot:F1LWU2
Length = 186
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +F++ + + ++Q+PD + K C E+WKTM +E KY D+A +
Sbjct: 9 PKGKVSSYTFFVQTWEE-HKKQHPDASVNFSEFSKKCSERWKTMCAKENGKYEDMAKADK 67
Query: 126 AEFDRAMADYIKRKENGK 143
A +R M YI K K
Sbjct: 68 AHHEREMKTYILPKGETK 85
>UNIPROTKB|F1N1P2 [details] [associations]
symbol:F1N1P2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 GeneTree:ENSGT00560000076717 EMBL:DAAA02056400
IPI:IPI00904552 Ensembl:ENSBTAT00000020361 Uniprot:F1N1P2
Length = 199
Score = 115 (45.5 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP A+ +F++ R+ +++N ++ + K C E+WKTM+ +EK K+ ++A
Sbjct: 6 PKKPKGKMCAYAFFVQMCREEHKKKNSEVPVNFAEFSKKCSERWKTMSRKEKSKFDEMAK 65
Query: 123 EKRAEFDRAMADY 135
+ +D+ M DY
Sbjct: 66 AYKMHYDQEMKDY 78
Score = 96 (38.9 bits), Expect = 0.00091, P = 0.00091
Identities = 31/100 (31%), Positives = 48/100 (48%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+ P+ F +F + +P I S+R + K GE W ++ EK Y + A K
Sbjct: 92 PKRLPSGCLLFCSEFHPKIKSTHPGI-SIRDVAKKLGEMWNNLSDSEKQPYINKAA-KLK 149
Query: 127 EFDRAMADYIKR-KENG-----KVENS---EEDSEFDEYE 157
++++ AD+ R K +G KV EED E +E E
Sbjct: 150 KYEKDAADHKSRGKFDGTKGPAKVAGKMVEEEDKEDEEEE 189
>POMBASE|SPBC28F2.11 [details] [associations]
symbol:SPBC28F2.11 "HMG box protein" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0043066 "negative regulation of
apoptotic process" evidence=IGI] InterPro:IPR009071
PomBase:SPBC28F2.11 GO:GO:0005794 GO:GO:0043066 GO:GO:0006355
GO:GO:0003677 EMBL:CU329671 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Pfam:PF09011 HSSP:P63159
OrthoDB:EOG4RV61X PIR:T40054 RefSeq:NP_595672.1
ProteinModelPortal:Q9USU7 STRING:Q9USU7 EnsemblFungi:SPBC28F2.11.1
GeneID:2540337 KEGG:spo:SPBC28F2.11 eggNOG:NOG246329
NextBio:20801465 Uniprot:Q9USU7
Length = 310
Score = 120 (47.3 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 36/152 (23%), Positives = 65/152 (42%)
Query: 2 AKKAANEPKESQSSSASNLKMVLRKRPTRHSVVAAVGIEKEGKSISAXXXXXXXXXXXXX 61
AKK N ES S A++ P + + A +E ++
Sbjct: 60 AKKEINMAIESPSKKATS--------PKKATPAAVAPVEATSAVDTSEAVASMTPNKRKA 111
Query: 62 XXXXMPKKPPTAFFYFLEDFRKGFQEQ-NPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
PK+PP+A+ F ++ R +E ++ + KA EKW +++ +++ Y +
Sbjct: 112 RDPAQPKRPPSAYNLFQKNQRSEIKESLGEKSNDVKEVNKAMHEKWGSLSEDDRKTYEEE 171
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENSEEDSE 152
A++ R ++ MA Y KEN V +S +E
Sbjct: 172 ASKLREAYEEEMAAYNASKENASVADSRVTAE 203
>RGD|1583212 [details] [associations]
symbol:LOC685091 "similar to High mobility group protein 1
(HMG-1) (High mobility group protein B1) (Amphoterin)
(Heparin-binding protein p30)" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] REFSEQ:XM_001062256 Ncbi:XP_001062256
Length = 203
Score = 114 (45.2 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +F++ + + ++Q+PD + K C E+WKTM +E KY D+A +
Sbjct: 17 PKGKVSSYTFFVQTWEE-HKKQHPDASVNFSEFSKKCSERWKTMCAKENGKYEDMAKADK 75
Query: 126 AEFDRAMADYIKRKENGK 143
A +R M YI K K
Sbjct: 76 AHHEREMKTYILPKGETK 93
>FB|FBgn0011764 [details] [associations]
symbol:Dsp1 "Dorsal switch protein 1" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0043388 "positive
regulation of DNA binding" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0017025 "TBP-class protein binding" evidence=IPI]
[GO:0017055 "negative regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IDA]
[GO:0032502 "developmental process" evidence=IMP] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0006338 "chromatin
remodeling" evidence=IMP] [GO:0007379 "segment specification"
evidence=IMP] [GO:0008301 "DNA binding, bending" evidence=IDA]
[GO:0035218 "leg disc development" evidence=IMP] [GO:0008348
"negative regulation of antimicrobial humoral response"
evidence=IGI;IMP] [GO:0005700 "polytene chromosome" evidence=IDA]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0005634 EMBL:AE014298 GO:GO:0006338 eggNOG:COG5648
GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0003697 GO:GO:0007379 GO:GO:0005700
GO:GO:0043388 Pfam:PF09011 GO:GO:0006268
GeneTree:ENSGT00560000076898 EMBL:U13881 EMBL:X89811 EMBL:X81456
EMBL:AY060841 PIR:JC6179 PIR:S50068 RefSeq:NP_542446.2
RefSeq:NP_727959.2 RefSeq:NP_727960.1 RefSeq:NP_727961.1
RefSeq:NP_996485.1 UniGene:Dm.2879 ProteinModelPortal:Q24537
SMR:Q24537 DIP:DIP-29511N MINT:MINT-344326 STRING:Q24537
PaxDb:Q24537 PRIDE:Q24537 EnsemblMetazoa:FBtr0089263 GeneID:117294
KEGG:dme:Dmel_CG12223 CTD:117294 FlyBase:FBgn0011764
InParanoid:Q24537 KO:K10802 OrthoDB:EOG480GCJ ChiTaRS:Dsp1
GenomeRNAi:117294 NextBio:841819 Bgee:Q24537 GermOnline:CG12223
GO:GO:0035218 GO:GO:0008348 GO:GO:0017055 Uniprot:Q24537
Length = 393
Score = 120 (47.3 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+ +AFF+F D R + NP+ + I K G KW + E K KY +A +A
Sbjct: 271 PKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVDPEVKQKYESMAERDKA 329
Query: 127 EFDRAMADYIKRKENGKVENS 147
++R M +Y K +GK+ S
Sbjct: 330 RYEREMTEY---KTSGKIAMS 347
Score = 116 (45.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 21/74 (28%), Positives = 45/74 (60%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK +++++A + +
Sbjct: 179 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 238
Query: 126 AEFDRAMADYIKRK 139
++ M +Y+ K
Sbjct: 239 QRYEAEMQNYVPPK 252
>ZFIN|ZDB-GENE-041008-209 [details] [associations]
symbol:ssrp1b "structure specific recognition
protein 1b" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR009071
InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
ZFIN:ZDB-GENE-041008-209 GO:GO:0005634 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00700000104547
InterPro:IPR013719 Pfam:PF08512 InterPro:IPR024954 EMBL:BX511158
IPI:IPI00502576 PRIDE:F6NLJ7 Ensembl:ENSDART00000131296 Bgee:F6NLJ7
Uniprot:F6NLJ7
Length = 703
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R + +NP I S+ I K GE WK + ++K ++ A E +
Sbjct: 543 PKRPMSAYMLWLNSSRDRIKSENPGI-SITEISKKAGEMWKQLGKDKKEEWDGKAEEAKK 601
Query: 127 EFDRAMADYIKRKENGKVENSEE 149
E+DRAM +Y R+ G S +
Sbjct: 602 EYDRAMREY--RESGGGSSGSSK 622
>UNIPROTKB|J9NYX4 [details] [associations]
symbol:SSRP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR000969
PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00700000104547 InterPro:IPR013719
Pfam:PF08512 InterPro:IPR024954 EMBL:AAEX03011448
Ensembl:ENSCAFT00000049552 Uniprot:J9NYX4
Length = 551
Score = 120 (47.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R+ + +P I S+ + K GE WK M+ E+K ++ A + R
Sbjct: 389 PKRPMSAYMLWLNASREKIKADHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARR 447
Query: 127 EFDRAMADYIKRKENGKVENSEED 150
E+++AM +Y E G+ E+S+ D
Sbjct: 448 EYEKAMKEY----EGGRGESSKRD 467
>UNIPROTKB|F6QYV9 [details] [associations]
symbol:SSRP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
GO:GO:0005634 GO:GO:0005737 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00700000104547 InterPro:IPR013719
Pfam:PF08512 InterPro:IPR024954 OMA:PVEVKKG EMBL:DAAA02041723
IPI:IPI00699243 UniGene:Bt.5242 Ensembl:ENSBTAT00000000486
Uniprot:F6QYV9
Length = 709
Score = 121 (47.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R+ + +P I S+ + K GE WK M+ E+K ++ A + R
Sbjct: 547 PKRPMSAYMLWLNASREKIKSDHPGI-SVTDLSKKAGEIWKGMSKEKKEEWDRKAEDARR 605
Query: 127 EFDRAMADYIKRKENGKVENSEED 150
E+++AM +Y E G+ E+S+ D
Sbjct: 606 EYEKAMKEY----EGGRGESSKRD 625
>UNIPROTKB|I3LLA8 [details] [associations]
symbol:SSRP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
GO:GO:0005634 GO:GO:0005737 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00700000104547 InterPro:IPR013719
Pfam:PF08512 KO:K09272 InterPro:IPR024954 OMA:PVEVKKG CTD:6749
EMBL:FP312857 RefSeq:XP_003353912.1 Ensembl:ENSSSCT00000023703
GeneID:100624907 KEGG:ssc:100624907 Uniprot:I3LLA8
Length = 709
Score = 121 (47.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R+ + +P I S+ + K GE WK M+ E+K ++ A + R
Sbjct: 547 PKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARR 605
Query: 127 EFDRAMADYIKRKENGKVENSEED 150
E+++AM +Y E G+ E+S+ D
Sbjct: 606 EYEKAMKEY----EGGRGESSKRD 625
>RGD|1560584 [details] [associations]
symbol:RGD1560584 "similar to High mobility group protein 1
(HMG-1)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Pfam:PF09011 OrthoDB:EOG4KWJV1
GeneTree:ENSGT00560000076717 IPI:IPI00559222
Ensembl:ENSRNOT00000049438 Uniprot:D3ZIU9
Length = 204
Score = 110 (43.8 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 25/81 (30%), Positives = 45/81 (55%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP ++ +F++ R+ ++++ + + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSHAFFVQTCREEHKKKHLNASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+A ++R M YI K K
Sbjct: 66 ADKARYEREMKTYIPPKGETK 86
>SGD|S000006256 [details] [associations]
symbol:NHP6A "High-mobility group (HMG) protein, binds to and
remodels nucleosomes" species:4932 "Saccharomyces cerevisiae"
[GO:0032301 "MutSalpha complex" evidence=IDA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0070898 "RNA polymerase
III transcriptional preinitiation complex assembly"
evidence=IGI;IDA] [GO:0006338 "chromatin remodeling" evidence=IGI]
[GO:0034724 "DNA replication-independent nucleosome organization"
evidence=IDA] [GO:0051123 "RNA polymerase II transcriptional
preinitiation complex assembly" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0008301 "DNA binding, bending"
evidence=IDA] [GO:0031491 "nucleosome binding" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IC] InterPro:IPR009071 SGD:S000006256 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0006355 GO:GO:0043565
GO:GO:0006338 eggNOG:COG5648 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
EMBL:Z71255 EMBL:BK006949 GO:GO:0031491 EMBL:Z49219
GeneTree:ENSGT00560000076898 HOGENOM:HOG000197861 GO:GO:0051123
EMBL:M95912 EMBL:X15317 EMBL:AY693230 PIR:A35072 RefSeq:NP_015377.1
PDB:1CG7 PDB:1J5N PDB:1LWM PDBsum:1CG7 PDBsum:1J5N PDBsum:1LWM
DisProt:DP00432 ProteinModelPortal:P11632 SMR:P11632 IntAct:P11632
MINT:MINT-2785986 STRING:P11632 PaxDb:P11632 PeptideAtlas:P11632
EnsemblFungi:YPR052C GeneID:856165 KEGG:sce:YPR052C CYGD:YPR052c
OMA:FFANDNR OrthoDB:EOG4S7P0P EvolutionaryTrace:P11632
NextBio:981313 Genevestigator:P11632 GermOnline:YPR052C
GO:GO:0034724 GO:GO:0070898 Uniprot:P11632
Length = 93
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT--EK 124
PK+ +A+ +F + R + +NPDI + +GK GEKWK +T EEK Y A +K
Sbjct: 21 PKRALSAYMFFANENRDIVRSENPDI-TFGQVGKKLGEKWKALTPEEKQPYEAKAQADKK 79
Query: 125 RAEFDRAM 132
R E ++ +
Sbjct: 80 RYESEKEL 87
>UNIPROTKB|B6ZLK1 [details] [associations]
symbol:SSRP1 "Structure-specific recognition protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR009071 InterPro:IPR000969 PRINTS:PR00887
Pfam:PF00505 Pfam:PF03531 GO:GO:0005634 GO:GO:0005737
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00700000104547 InterPro:IPR013719 Pfam:PF08512
InterPro:IPR024954 OMA:PVEVKKG IPI:IPI00582237 UniGene:Gga.2985
HOVERGEN:HBG002932 EMBL:AADN02050757 EMBL:AADN02050758
EMBL:AB465209 STRING:B6ZLK1 Ensembl:ENSGALT00000012159
Ensembl:ENSGALT00000038738 Uniprot:B6ZLK1
Length = 706
Score = 119 (46.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R+ + +P I S+ + K GE WK M+ E+K ++ A + +
Sbjct: 545 PKRPMSAYMLWLNANREKIKSDHPGI-SITDLSKKAGELWKAMSKEKKEEWDRKAEDAKR 603
Query: 127 EFDRAMADYI--KRKENGKVENSEEDSEFDE 155
++++AM +Y + E+ K+E S++ + E
Sbjct: 604 DYEKAMKEYSVGNKSESSKMERSKKKKKKQE 634
>UNIPROTKB|Q04678 [details] [associations]
symbol:SSRP1 "FACT complex subunit SSRP1" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR009071
InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
GO:GO:0005694 GO:GO:0005730 GO:GO:0006355 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5165
KO:K09272 InterPro:IPR024954 HOGENOM:HOG000180790 EMBL:AJ719641
EMBL:L08815 EMBL:D14315 IPI:IPI00582237 PIR:S78050
RefSeq:NP_001005796.1 UniGene:Gga.2985 ProteinModelPortal:Q04678
STRING:Q04678 PRIDE:Q04678 GeneID:396509 KEGG:gga:396509 CTD:6749
HOVERGEN:HBG002932 InParanoid:Q04678 OrthoDB:EOG41VK2K
NextBio:20816548 Uniprot:Q04678
Length = 706
Score = 119 (46.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R+ + +P I S+ + K GE WK M+ E+K ++ A + +
Sbjct: 545 PKRPMSAYMLWLNANREKIKSDHPGI-SITDLSKKAGELWKAMSKEKKEEWDRKAEDAKR 603
Query: 127 EFDRAMADYI--KRKENGKVENSEEDSEFDE 155
++++AM +Y + E+ K+E S++ + E
Sbjct: 604 DYEKAMKEYSVGNKSESSKMERSKKKKKKQE 634
>TAIR|locus:2136103 [details] [associations]
symbol:3xHMG-box1 "3xHigh Mobility Group-box1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161531 GO:GO:0003677 GO:GO:0003700 eggNOG:COG5648
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:AF080120 EMBL:AL049876 HSSP:P07155 EMBL:AY133687 EMBL:AJ630485
EMBL:AY568657 IPI:IPI00533286 PIR:T01926 PIR:T08187
RefSeq:NP_192846.1 UniGene:At.33587 ProteinModelPortal:Q9T012
SMR:Q9T012 EnsemblPlants:AT4G11080.1 GeneID:826709
KEGG:ath:AT4G11080 TAIR:At4g11080 HOGENOM:HOG000238964
InParanoid:Q9T012 KO:K09273 OMA:CKDQWNE PhylomeDB:Q9T012
ProtClustDB:CLSN2686000 Genevestigator:Q9T012 Uniprot:Q9T012
Length = 446
Score = 116 (45.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 24/87 (27%), Positives = 46/87 (52%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ + + R + +N KS+ + K GE+WK ++ E+K Y +A + +
Sbjct: 246 PKQPISAYLIYANERRAALKGEN---KSVIEVAKMAGEEWKNLSEEKKAPYDQMAKKNKE 302
Query: 127 EFDRAMADYIKRKENGKVENSEEDSEF 153
+ + M Y + KE + +E+ EF
Sbjct: 303 IYLQEMEGYKRTKEEEAMSQKKEEEEF 329
Score = 100 (40.3 bits), Expect = 0.00069, P = 0.00069
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PKKP +++F F +D RK E++P I + + KW + EEK Y A E
Sbjct: 372 PKKPTSSYFLFCKDARKSVLEEHPGINNS-TVTAHISLKWMELGEEEKQVYNSKAAELME 430
Query: 127 EFDRAMADYIKRK 139
+ + + +Y K K
Sbjct: 431 AYKKEVEEYNKTK 443
>MGI|MGI:107912 [details] [associations]
symbol:Ssrp1 "structure specific recognition protein 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR009071
InterPro:IPR000969 PRINTS:PR00887 MGI:MGI:107912 Pfam:PF00505
Pfam:PF03531 GO:GO:0005737 GO:GO:0005694 GO:GO:0005730
GO:GO:0006355 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00700000104547 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5165 KO:K09272 InterPro:IPR024954 HOGENOM:HOG000180790
OMA:PVEVKKG CTD:6749 HOVERGEN:HBG002932 OrthoDB:EOG41VK2K
EMBL:S50213 EMBL:AK146446 EMBL:AK146585 EMBL:AK146607 EMBL:AK151584
EMBL:AK158552 EMBL:BC042502 EMBL:BC096682 IPI:IPI00407571
IPI:IPI00652593 PIR:A41265 RefSeq:NP_001129553.1 RefSeq:NP_892035.2
UniGene:Mm.219793 ProteinModelPortal:Q08943 SMR:Q08943
IntAct:Q08943 STRING:Q08943 PhosphoSite:Q08943 PaxDb:Q08943
PRIDE:Q08943 Ensembl:ENSMUST00000077798 Ensembl:ENSMUST00000168266
GeneID:20833 KEGG:mmu:20833 NextBio:299579 Bgee:Q08943
CleanEx:MM_SSRP1 Genevestigator:Q08943
GermOnline:ENSMUSG00000027067 Uniprot:Q08943
Length = 708
Score = 118 (46.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R+ + +P I S+ + K GE WK M+ E+K ++ A + R
Sbjct: 547 PKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARR 605
Query: 127 EFDRAMADYIKRKENGKVENSEED 150
E+++AM +Y E G+ ++S+ D
Sbjct: 606 EYEKAMKEY----EGGRGDSSKRD 625
>UNIPROTKB|Q08945 [details] [associations]
symbol:SSRP1 "FACT complex subunit SSRP1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0050434
"positive regulation of viral transcription" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 InterPro:IPR009071
InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0005694 GO:GO:0005654
GO:GO:0016032 GO:GO:0005730 GO:GO:0006355 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006368 Reactome:REACT_1788 GO:GO:0050434 Reactome:REACT_1892
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5165 KO:K09272
InterPro:IPR024954 HOGENOM:HOG000180790 OMA:PVEVKKG CTD:6749
HOVERGEN:HBG002932 OrthoDB:EOG41VK2K EMBL:M86737 EMBL:BC005116
EMBL:BC091486 IPI:IPI00005154 PIR:A41976 RefSeq:NP_003137.1
UniGene:Hs.523680 ProteinModelPortal:Q08945 SMR:Q08945 DIP:DIP-169N
IntAct:Q08945 MINT:MINT-5004485 STRING:Q08945 PhosphoSite:Q08945
DMDM:730840 PaxDb:Q08945 PeptideAtlas:Q08945 PRIDE:Q08945
DNASU:6749 Ensembl:ENST00000278412 GeneID:6749 KEGG:hsa:6749
UCSC:uc001njt.3 GeneCards:GC11M057093 HGNC:HGNC:11327 HPA:HPA002697
MIM:604328 neXtProt:NX_Q08945 PharmGKB:PA36151 InParanoid:Q08945
PhylomeDB:Q08945 ChiTaRS:SSRP1 GenomeRNAi:6749 NextBio:26328
PMAP-CutDB:Q08945 ArrayExpress:Q08945 Bgee:Q08945 CleanEx:HS_SSRP1
Genevestigator:Q08945 GermOnline:ENSG00000149136 Uniprot:Q08945
Length = 709
Score = 118 (46.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R+ + +P I S+ + K GE WK M+ E+K ++ A + R
Sbjct: 547 PKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARR 605
Query: 127 EFDRAMADYIKRKENGKVENSEED 150
++++AM +Y E G+ E+S+ D
Sbjct: 606 DYEKAMKEY----EGGRGESSKRD 625
>RGD|621143 [details] [associations]
symbol:Ssrp1 "structure specific recognition protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;NAS] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR009071 InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505
Pfam:PF03531 RGD:621143 GO:GO:0005694 GO:GO:0005730 GO:GO:0006355
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260
GO:GO:0006281 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00700000104547
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5165 KO:K09272
InterPro:IPR024954 HOGENOM:HOG000180790 CTD:6749 HOVERGEN:HBG002932
EMBL:BC083588 EMBL:L08814 IPI:IPI00231263 PIR:S35637
RefSeq:NP_112383.1 UniGene:Rn.35908 ProteinModelPortal:Q04931
STRING:Q04931 PhosphoSite:Q04931 PRIDE:Q04931
Ensembl:ENSRNOT00000012022 GeneID:81785 KEGG:rno:81785
UCSC:RGD:621143 NextBio:615643 ArrayExpress:Q04931
Genevestigator:Q04931 GermOnline:ENSRNOG00000008825 Uniprot:Q04931
Length = 709
Score = 118 (46.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R+ + +P I S+ + K GE WK M+ E+K ++ A + R
Sbjct: 547 PKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARR 605
Query: 127 EFDRAMADYIKRKENGKVENSEED 150
E+++AM +Y E G+ ++S+ D
Sbjct: 606 EYEKAMKEY----EGGRGDSSKRD 625
>UNIPROTKB|Q04931 [details] [associations]
symbol:Ssrp1 "FACT complex subunit SSRP1" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR009071
InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
RGD:621143 GO:GO:0005694 GO:GO:0005730 GO:GO:0006355
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260
GO:GO:0006281 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00700000104547
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5165 KO:K09272
InterPro:IPR024954 HOGENOM:HOG000180790 CTD:6749 HOVERGEN:HBG002932
EMBL:BC083588 EMBL:L08814 IPI:IPI00231263 PIR:S35637
RefSeq:NP_112383.1 UniGene:Rn.35908 ProteinModelPortal:Q04931
STRING:Q04931 PhosphoSite:Q04931 PRIDE:Q04931
Ensembl:ENSRNOT00000012022 GeneID:81785 KEGG:rno:81785
UCSC:RGD:621143 NextBio:615643 ArrayExpress:Q04931
Genevestigator:Q04931 GermOnline:ENSRNOG00000008825 Uniprot:Q04931
Length = 709
Score = 118 (46.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R+ + +P I S+ + K GE WK M+ E+K ++ A + R
Sbjct: 547 PKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARR 605
Query: 127 EFDRAMADYIKRKENGKVENSEED 150
E+++AM +Y E G+ ++S+ D
Sbjct: 606 EYEKAMKEY----EGGRGDSSKRD 625
>POMBASE|SPAC57A10.09c [details] [associations]
symbol:nhp6 "High-mobility group non-histone chromatin
protein (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006359
"regulation of transcription from RNA polymerase III promoter"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] InterPro:IPR009071
PomBase:SPAC57A10.09c Pfam:PF00505 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0033554 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0006351 GO:GO:0006338 eggNOG:COG5648
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0000790 GO:GO:0006334 GO:GO:0006359 HOGENOM:HOG000197861
OMA:LANPNNK OrthoDB:EOG4S7P0P PIR:T38936 RefSeq:NP_593314.1
ProteinModelPortal:P87057 STRING:P87057
EnsemblFungi:SPAC57A10.09c.1 GeneID:2542878 KEGG:spo:SPAC57A10.09c
NextBio:20803918 Uniprot:P87057
Length = 108
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+ +AF +F + R+ + NPD + +G G++WK +T E+ Y + A + +
Sbjct: 16 PKRNMSAFMFFSIENREKMKTDNPDA-TFGQLGSLLGKRWKELTSTEREPYEEKARQDKE 74
Query: 127 EFDRAMADYIKRKENGK 143
++R +Y + NG+
Sbjct: 75 RYERERKEYDTKLANGE 91
>ZFIN|ZDB-GENE-031118-9 [details] [associations]
symbol:ssrp1a "structure specific recognition protein
1a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR009071 InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505
Pfam:PF03531 ZFIN:ZDB-GENE-031118-9 GO:GO:0005634 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00700000104547
InterPro:IPR013719 Pfam:PF08512 InterPro:IPR024954 EMBL:BX510356
IPI:IPI00487997 Ensembl:ENSDART00000137795 ArrayExpress:F1QEB4
Bgee:F1QEB4 Uniprot:F1QEB4
Length = 705
Score = 115 (45.5 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R+ + +NP I S+ I K GE WK + ++K ++ A E +
Sbjct: 546 PKRPMSAYMLWLNGNRERIKSENPGI-SITEISKKAGEMWKQLGKDKKEEWDKKAEEAKR 604
Query: 127 EFDRAMADYIKRKENG 142
++++AM +Y KE+G
Sbjct: 605 QYEKAMKEY---KESG 617
>SGD|S000002157 [details] [associations]
symbol:NHP6B "High-mobility group (HMG) protein, binds to and
remodels nucleosomes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI] [GO:0070898 "RNA polymerase III
transcriptional preinitiation complex assembly" evidence=IGI;IDA]
[GO:0008301 "DNA binding, bending" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=ISS] InterPro:IPR009071
SGD:S000002157 Pfam:PF00505 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0043565 GO:GO:0006281 EMBL:BK006936
GO:GO:0006338 eggNOG:COG5648 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006366
EMBL:X78993 GO:GO:0031491 GeneTree:ENSGT00560000076898
HOGENOM:HOG000197861 OMA:LANPNNK OrthoDB:EOG4S7P0P GO:GO:0070898
EMBL:X15318 EMBL:Z35957 EMBL:Z35959 EMBL:AY558566 EMBL:EF123125
PIR:S78076 RefSeq:NP_009647.2 ProteinModelPortal:P11633 SMR:P11633
DIP:DIP-6748N IntAct:P11633 MINT:MINT-615533 STRING:P11633
PaxDb:P11633 PeptideAtlas:P11633 EnsemblFungi:YBR089C-A
GeneID:852386 KEGG:sce:YBR089C-A CYGD:YBR089c-a NextBio:971195
Genevestigator:P11633 GermOnline:YBR089C-A Uniprot:P11633
Length = 99
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT--EK 124
PK+ +A+ +F + R + +NPD+ + +G+ GE+WK +T EEK Y A +K
Sbjct: 27 PKRGLSAYMFFANENRDIVRSENPDV-TFGQVGRILGERWKALTAEEKQPYESKAQADKK 85
Query: 125 RAEFDRAM 132
R E ++ +
Sbjct: 86 RYESEKEL 93
>UNIPROTKB|F1Q2J2 [details] [associations]
symbol:SSRP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR000969
PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531 GO:GO:0005634
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00700000104547 InterPro:IPR013719 Pfam:PF08512
InterPro:IPR024954 OMA:PVEVKKG EMBL:AAEX03011448
Ensembl:ENSCAFT00000012707 Uniprot:F1Q2J2
Length = 710
Score = 114 (45.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R+ + +P I S+ + K GE WK M+ E+K ++ A + R
Sbjct: 546 PKRPMSAYMLWLNASREKIKADHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARR 604
Query: 127 EFDRAMADYIKRKENGKVENSE 148
E+++AM +Y E G+ E+S+
Sbjct: 605 EYEKAMKEY----EGGRGESSK 622
>FB|FBgn0010278 [details] [associations]
symbol:Ssrp "Structure specific recognition protein"
species:7227 "Drosophila melanogaster" [GO:0000217 "DNA secondary
structure binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS;NAS] [GO:0005634 "nucleus" evidence=ISS;NAS]
[GO:0003727 "single-stranded RNA binding" evidence=NAS] [GO:0005730
"nucleolus" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0001672 "regulation of chromatin assembly or
disassembly" evidence=IMP] [GO:0035101 "FACT complex"
evidence=IDA;TAS] [GO:0043621 "protein self-association"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051101 "regulation of DNA binding" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR009071 InterPro:IPR000969
PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531 EMBL:AE013599
GO:GO:0005694 GO:GO:0022008 GO:GO:0006355 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
GO:GO:0003723 GO:GO:0043621 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0051101 GO:GO:0031492
GeneTree:ENSGT00700000104547 GO:GO:0001672 GO:GO:0035101
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5165 KO:K09272
InterPro:IPR024954 OMA:PVEVKKG EMBL:L08825 EMBL:X68408
EMBL:BT004831 PIR:A48217 PIR:S33688 RefSeq:NP_523830.2
UniGene:Dm.3383 PDB:1WXL PDBsum:1WXL ProteinModelPortal:Q05344
SMR:Q05344 IntAct:Q05344 STRING:Q05344 PaxDb:Q05344
EnsemblMetazoa:FBtr0072242 GeneID:37767 KEGG:dme:Dmel_CG4817
CTD:37767 FlyBase:FBgn0010278 InParanoid:Q05344 OrthoDB:EOG40CFZ2
PhylomeDB:Q05344 EvolutionaryTrace:Q05344 GenomeRNAi:37767
NextBio:805310 Bgee:Q05344 GermOnline:CG4817 Uniprot:Q05344
Length = 723
Score = 114 (45.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+ TAF +L D R+ + +NP IK + I K GE WK + ++K K+ D A + +
Sbjct: 555 PKRATTAFMLWLNDTRESIKRENPGIK-VTEIAKKGGEMWKEL--KDKSKWEDAAAKDKQ 611
Query: 127 EFDRAMADYIKRKENGKVENSE 148
+ M +Y K + G +N +
Sbjct: 612 RYHDEMRNY-KPEAGGDSDNEK 632
>FB|FBgn0038978 [details] [associations]
symbol:CG7045 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0000785 "chromatin" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 EMBL:AE014297 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00700000104547 HSSP:Q05783 OrthoDB:EOG4MCVGR
RefSeq:NP_651055.1 UniGene:Dm.1280 ProteinModelPortal:Q9VCZ5
SMR:Q9VCZ5 MINT:MINT-1649734 STRING:Q9VCZ5 PRIDE:Q9VCZ5
EnsemblMetazoa:FBtr0084258 GeneID:42650 KEGG:dme:Dmel_CG7045
UCSC:CG7045-RA FlyBase:FBgn0038978 InParanoid:Q9VCZ5
PhylomeDB:Q9VCZ5 GenomeRNAi:42650 NextBio:829878
ArrayExpress:Q9VCZ5 Bgee:Q9VCZ5 Uniprot:Q9VCZ5
Length = 126
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 67 PKKPPTAFFYFLEDF-RKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PKKP +AF ++ RK + ++PD S++ + GE W+ M E+K+ + + AT
Sbjct: 8 PKKPMSAFMLWMNSTGRKHIKAEHPDF-SVQEVSVKGGEMWRAMADEDKIVWQESATTAM 66
Query: 126 AEFDRAMADYIKRKEN 141
AE+ + + KE+
Sbjct: 67 AEYKEKLKQWNFPKEH 82
>DICTYBASE|DDB_G0282427 [details] [associations]
symbol:DDB_G0282427 "HMG1/2 (high mobility group)
box-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 dictyBase:DDB_G0282427 Pfam:PF00505
EMBL:AAFI02000047 GO:GO:0046872 GO:GO:0008270 eggNOG:COG5648
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 RefSeq:XP_640043.1 ProteinModelPortal:Q54SJ6
EnsemblProtists:DDB0220651 GeneID:8623570 KEGG:ddi:DDB_G0282427
InParanoid:Q54SJ6 OMA:YMNINRE Uniprot:Q54SJ6
Length = 795
Score = 114 (45.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/81 (29%), Positives = 47/81 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
P+ +A+F+++ R+ + NPD+ + I K G KWK +T +++ +YY+ A E +
Sbjct: 327 PRSNVSAYFHYMNINREDEKRMNPDVP-LSDISKILGAKWKQLTPDDQKEYYEKAREDKI 385
Query: 127 EFDRAMADYIKRKENGKVENS 147
++ M Y ++ + +VENS
Sbjct: 386 RYENEMVLYNQKCK--EVENS 404
>UNIPROTKB|F1NLS2 [details] [associations]
symbol:TFAM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0006391
"transcription initiation from mitochondrial promoter"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0070363 "mitochondrial light
strand promoter sense binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0045893 GO:GO:0003682 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0042645
GO:GO:0033108 GO:GO:0006391 GO:GO:0070363 OMA:YENEMKS
GeneTree:ENSGT00440000039001 EMBL:AADN02035299 IPI:IPI00588565
Ensembl:ENSGALT00000041096 ArrayExpress:F1NLS2 Uniprot:F1NLS2
Length = 264
Score = 107 (42.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+F FL D + F++QNP++ S+ + K G W+ + +K Y +
Sbjct: 47 PKRPLSAYFRFLRDNQPAFRQQNPELNSLELVKKLAGV-WRELPASQKQVYEEARKTDWR 105
Query: 127 EFDRAMADY 135
+++ +A Y
Sbjct: 106 KYEEQLAAY 114
>UNIPROTKB|Q9W602 [details] [associations]
symbol:ssrp1 "FACT complex subunit SSRP1" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR009071 InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505
Pfam:PF03531 GO:GO:0005694 GO:GO:0005730 GO:GO:0006355
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260
GO:GO:0006281 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 InterPro:IPR013719 Pfam:PF08512
KO:K09272 InterPro:IPR024954 CTD:6749 HOVERGEN:HBG002932
EMBL:AB004793 EMBL:BC082613 RefSeq:NP_001084164.1 UniGene:Xl.336
ProteinModelPortal:Q9W602 PRIDE:Q9W602 GeneID:399344
KEGG:xla:399344 Xenbase:XB-GENE-994299 Uniprot:Q9W602
Length = 693
Score = 112 (44.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 22/69 (31%), Positives = 42/69 (60%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R+ + +NP I S+ + K GE WK M+ ++K ++ A E +
Sbjct: 541 PKRPMSAYMLWLNASREKIKSENPGI-SITDLSKKAGEIWKNMSRDKKEEWDRRAEEAKR 599
Query: 127 EFDRAMADY 135
++++AM +Y
Sbjct: 600 DYEKAMKEY 608
>FB|FBgn0038979 [details] [associations]
symbol:CG7046 species:7227 "Drosophila melanogaster"
[GO:0000785 "chromatin" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 FlyBase:FBgn0038979 EMBL:AY070828
HSSP:Q05783 ProteinModelPortal:Q8T957 SMR:Q8T957 STRING:Q8T957
PRIDE:Q8T957 eggNOG:NOG253857 InParanoid:Q8T957 OrthoDB:EOG4MCVGR
ArrayExpress:Q8T957 Bgee:Q8T957 Uniprot:Q8T957
Length = 138
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 67 PKKPPTAFFYFLEDF-RKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PKKP +AF ++ RK + ++PD S++ + GE W+ M E K+ + + A++
Sbjct: 8 PKKPMSAFMLWMNSTGRKNIRAEHPDF-SVQEVSVKGGEMWRAMADEHKIVWQESASKAM 66
Query: 126 AEFDRAMADYIKRKEN 141
AE+ + + KE+
Sbjct: 67 AEYKEKLEKWNAFKEH 82
>UNIPROTKB|Q6GL68 [details] [associations]
symbol:tcf7l1 "Transcription factor 7-like 1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0003682 "chromatin binding"
evidence=IBA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IBA] [GO:0005667
"transcription factor complex" evidence=ISS;IBA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IBA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IBA] [GO:0007420 "brain development"
evidence=IBA] [GO:0008013 "beta-catenin binding" evidence=IBA]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IBA]
[GO:0022008 "neurogenesis" evidence=IBA] [GO:0043565
"sequence-specific DNA binding" evidence=IBA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IBA]
[GO:0048699 "generation of neurons" evidence=IBA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IBA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0007420
GO:GO:0043565 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0008134
GO:GO:0008013 GO:GO:0060070 GO:GO:0048699 HOGENOM:HOG000116032
HOVERGEN:HBG000419 InterPro:IPR013558 PANTHER:PTHR10373
Pfam:PF08347 eggNOG:NOG252916 GeneTree:ENSGT00390000009964
KO:K04490 OrthoDB:EOG46MBJM CTD:83439 EMBL:BC074638
RefSeq:NP_001005640.1 UniGene:Str.11534 ProteinModelPortal:Q6GL68
SMR:Q6GL68 STRING:Q6GL68 Ensembl:ENSXETT00000045614 GeneID:448107
KEGG:xtr:448107 Xenbase:XB-GENE-1031985 InParanoid:Q6GL68
OMA:VNESENH Bgee:Q6GL68 Uniprot:Q6GL68
Length = 553
Score = 110 (43.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 24/90 (26%), Positives = 45/90 (50%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W +++ EE+ KYY++A ++R
Sbjct: 325 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHSLSREEQAKYYELARKERQL 383
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFDEYE 157
+ + R GK + + D + E E
Sbjct: 384 HSQLYPTWSARDNYGKRKKRKRDKQSPEME 413
>FB|FBgn0004362 [details] [associations]
symbol:HmgD "High mobility group protein D" species:7227
"Drosophila melanogaster" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IDA]
[GO:0003680 "AT DNA binding" evidence=IDA] [GO:0008301 "DNA
binding, bending" evidence=IDA;NAS] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] InterPro:IPR009071 Pfam:PF00505 EMBL:AE013599
GO:GO:0005634 GO:GO:0005694 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048813
GO:GO:0007517 GO:GO:0006325 GO:GO:0003680 eggNOG:NOG320947
EMBL:M77023 EMBL:X71138 EMBL:AM294353 EMBL:AM294354 EMBL:AM294355
EMBL:AM294356 EMBL:AM294357 EMBL:AM294358 EMBL:AM294359
EMBL:AM294360 EMBL:AM294361 EMBL:AM294362 EMBL:AM294363
EMBL:AY118333 PIR:A44382 RefSeq:NP_001163244.1 RefSeq:NP_726109.1
RefSeq:NP_726110.1 UniGene:Dm.7318 PDB:1E7J PDB:1HMA PDB:1QRV
PDB:3NM9 PDBsum:1E7J PDBsum:1HMA PDBsum:1QRV PDBsum:3NM9
ProteinModelPortal:Q05783 SMR:Q05783 DIP:DIP-22805N IntAct:Q05783
MINT:MINT-843935 STRING:Q05783 PaxDb:Q05783 PRIDE:Q05783
EnsemblMetazoa:FBtr0071708 EnsemblMetazoa:FBtr0071709
EnsemblMetazoa:FBtr0301410 GeneID:37481 KEGG:dme:Dmel_CG17950
CTD:37481 FlyBase:FBgn0004362 GeneTree:ENSGT00700000104547
InParanoid:Q05783 OMA:WRAMSEQ OrthoDB:EOG4TX98R PhylomeDB:Q05783
ChiTaRS:HmgD EvolutionaryTrace:Q05783 GenomeRNAi:37481
NextBio:803865 Bgee:Q05783 GermOnline:CG17950 Uniprot:Q05783
Length = 112
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L R+ + +NP IK + + K GE W+ M ++K ++ A + +
Sbjct: 5 PKRPLSAYMLWLNSARESIKRENPGIK-VTEVAKRGGELWRAM--KDKSEWEAKAAKAKD 61
Query: 127 EFDRAMADY 135
++DRA+ ++
Sbjct: 62 DYDRAVKEF 70
>GENEDB_PFALCIPARUM|PFL0145c [details] [associations]
symbol:PFL0145c "high mobility group protein"
species:5833 "Plasmodium falciparum" [GO:0005634 "nucleus"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0000785 "chromatin" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0000785 GO:GO:0003682
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:AE014188 HOGENOM:HOG000197861 HSSP:P11632 OMA:FFANDNR
GenomeReviews:AE014188_GR RefSeq:XP_001350438.1
ProteinModelPortal:Q8I616 EnsemblProtists:PFL0145c:mRNA
GeneID:811082 KEGG:pfa:PFL0145c EuPathDB:PlasmoDB:PF3D7_1202900
ProtClustDB:PTZ00199 Uniprot:Q8I616
Length = 97
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDI-KSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK+ +A+ +F ++ R + P++ K + +GK GE W + +EK + A E +
Sbjct: 21 PKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAPFEKKAQEDK 80
Query: 126 AEFDRAMADYIKRK 139
+++ A+Y K
Sbjct: 81 LRYEKEKAEYANMK 94
>UNIPROTKB|Q8I616 [details] [associations]
symbol:HMGB1 "High mobility group protein" species:36329
"Plasmodium falciparum 3D7" [GO:0000785 "chromatin" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0000785 GO:GO:0003682 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:AE014188 HOGENOM:HOG000197861
HSSP:P11632 OMA:FFANDNR GenomeReviews:AE014188_GR
RefSeq:XP_001350438.1 ProteinModelPortal:Q8I616
EnsemblProtists:PFL0145c:mRNA GeneID:811082 KEGG:pfa:PFL0145c
EuPathDB:PlasmoDB:PF3D7_1202900 ProtClustDB:PTZ00199 Uniprot:Q8I616
Length = 97
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDI-KSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK+ +A+ +F ++ R + P++ K + +GK GE W + +EK + A E +
Sbjct: 21 PKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAPFEKKAQEDK 80
Query: 126 AEFDRAMADYIKRK 139
+++ A+Y K
Sbjct: 81 LRYEKEKAEYANMK 94
>UNIPROTKB|Q90ZB6 [details] [associations]
symbol:tcf7l1-b "Transcription factor 7-like 1-B"
species:8355 "Xenopus laevis" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0007275 GO:GO:0005634 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 KO:K04490
EMBL:AF287149 EMBL:BC077764 RefSeq:NP_001080938.1 UniGene:Xl.85456
ProteinModelPortal:Q90ZB6 SMR:Q90ZB6 MINT:MINT-4979333
GeneID:394281 KEGG:xla:394281 CTD:394281 Xenbase:XB-GENE-1031992
Uniprot:Q90ZB6
Length = 551
Score = 108 (43.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 23/90 (25%), Positives = 45/90 (50%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W +++ EE+ KYY++A ++R
Sbjct: 325 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHSLSREEQAKYYELARKERQL 383
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFDEYE 157
+ + R GK + + + + E E
Sbjct: 384 HSQLYPSWSARDNYGKKKKRKREKQSPEME 413
>UNIPROTKB|F1LZG8 [details] [associations]
symbol:F1LZG8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Pfam:PF09011 IPI:IPI00560402
Ensembl:ENSRNOT00000043102 Uniprot:F1LZG8
Length = 203
Score = 95 (38.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 17/64 (26%), Positives = 37/64 (57%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ +F++ K +++ PD+ + K C E+WKTM+ +EK K+ +I +
Sbjct: 9 PRGKMSSYAFFVQACWKEHKKKQPDVSVNFSEFSKKCSERWKTMSTKEKGKFENIGKADK 68
Query: 126 AEFD 129
A ++
Sbjct: 69 AHYE 72
Score = 39 (18.8 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 134 DYIKRKENGKVENSEEDSEFDEYE 157
D K E K E EE+ E +E E
Sbjct: 180 DEKKEVEEEKEEEEEEEEEEEEEE 203
>UNIPROTKB|O42601 [details] [associations]
symbol:sox17b.1 "Transcription factor Sox-17-beta.1"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0007494 "midgut development"
evidence=IMP] [GO:0008013 "beta-catenin binding" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0016055
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 GO:GO:0007494
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0008013 GO:GO:0007492 GO:GO:0030178
GO:GO:0007369 HSSP:P48431 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 EMBL:AJ001742 EMBL:BC070615 RefSeq:NP_001081633.1
UniGene:Xl.44 ProteinModelPortal:O42601 SMR:O42601 GeneID:397967
KEGG:xla:397967 CTD:397967 Xenbase:XB-GENE-6252148 Uniprot:O42601
Length = 373
Score = 105 (42.0 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 26/86 (30%), Positives = 43/86 (50%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
++P AF + +D RK +QNPD+ + + K G+ WK++T K + + A R +
Sbjct: 59 RRPMNAFMVWAKDERKRLAQQNPDLHNAE-LSKMLGKSWKSLTLATKRPFVEEAERLRVQ 117
Query: 128 FDRAMADYI---KRKENGKVENSEED 150
+ DY +RK+ K EED
Sbjct: 118 HIQDYPDYKYRPRRKKQVKRMKREED 143
>UNIPROTKB|G4MS97 [details] [associations]
symbol:MGG_04489 "Non-histone chromosomal protein 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR009071 Pfam:PF00505
GO:GO:0043565 GO:GO:0006338 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 EMBL:CM001231
GO:GO:0031491 GO:GO:0051123 GO:GO:0032301 GO:GO:0034724
GO:GO:0070898 RefSeq:XP_003710967.1 ProteinModelPortal:G4MS97
SMR:G4MS97 EnsemblFungi:MGG_04489T0 GeneID:2678075
KEGG:mgr:MGG_04489 Uniprot:G4MS97
Length = 101
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY--YDIATEK 124
PK+ +A+ +F + R +E+NP + + +GK GE+WK ++ +++ Y A +K
Sbjct: 24 PKRGLSAYMFFANEQRDNVREENPGV-TFGQVGKILGERWKALSDKQRAPYDAKAAADKK 82
Query: 125 RAEFDRA 131
R E ++A
Sbjct: 83 RYEDEKA 89
>MGI|MGI:98369 [details] [associations]
symbol:Sox7 "SRY-box containing gene 7" species:10090 "Mus
musculus" [GO:0001706 "endoderm formation" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0060828 "regulation
of canonical Wnt receptor signaling pathway" evidence=ISO]
InterPro:IPR009071 MGI:MGI:98369 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0043565 GO:GO:0003705
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 eggNOG:NOG242943 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 KO:K09270 HOGENOM:HOG000069999 HOVERGEN:HBG000517
CTD:83595 OrthoDB:EOG447FTC EMBL:AB023419 EMBL:X65660
IPI:IPI00112869 PIR:S22945 RefSeq:NP_035576.1 UniGene:Mm.42162
ProteinModelPortal:P40646 SMR:P40646 STRING:P40646
PhosphoSite:P40646 PRIDE:P40646 Ensembl:ENSMUST00000079652
GeneID:20680 KEGG:mmu:20680 InParanoid:P40646 OMA:ECPALEA
NextBio:299185 Bgee:P40646 CleanEx:MM_SOX7 Genevestigator:P40646
GermOnline:ENSMUSG00000063060 Uniprot:P40646
Length = 380
Score = 105 (42.0 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
++P AF + +D RK QNPD+ + + K G+ WK +T +K Y D A R +
Sbjct: 46 RRPMNAFMVWAKDERKRLAVQNPDLHNAE-LSKMLGKSWKALTLSQKRPYVDEAERLRLQ 104
Query: 128 FDRAMADYI---KRKENGK 143
+ +Y +RK+ GK
Sbjct: 105 HMQDYPNYKYRPRRKKQGK 123
>RGD|1310038 [details] [associations]
symbol:Sox7 "SRY (sex determining region Y)-box 7" species:10116
"Rattus norvegicus" [GO:0001706 "endoderm formation"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0043280
"positive regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0060828
"regulation of canonical Wnt receptor signaling pathway"
evidence=IEA;ISO] InterPro:IPR009071 Pfam:PF00505 RGD:1310038
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0043565
GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270 CTD:83595
OrthoDB:EOG447FTC OMA:ECPALEA EMBL:CH474023 IPI:IPI00373062
RefSeq:NP_001099515.1 UniGene:Rn.17732 Ensembl:ENSRNOT00000016503
GeneID:290317 KEGG:rno:290317 UCSC:RGD:1310038 NextBio:630913
Uniprot:D3ZTE1
Length = 383
Score = 105 (42.0 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
++P AF + +D RK QNPD+ + + K G+ WK +T +K Y D A R +
Sbjct: 46 RRPMNAFMVWAKDERKRLAVQNPDLHNAE-LSKMLGKSWKALTLSQKRPYVDEAERLRLQ 104
Query: 128 FDRAMADYI---KRKENGK 143
+ +Y +RK+ GK
Sbjct: 105 HMQDYPNYKYRPRRKKQGK 123
>ZFIN|ZDB-GENE-991110-10 [details] [associations]
symbol:tcf7l1b "transcription factor 7-like 1b
(T-cell specific, HMG-box)" species:7955 "Danio rerio" [GO:0016055
"Wnt receptor signaling pathway" evidence=IEA] [GO:0021903
"rostrocaudal neural tube patterning" evidence=IMP] [GO:0030901
"midbrain development" evidence=IMP] [GO:0010456 "cell
proliferation in dorsal spinal cord" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IBA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IBA]
[GO:0005667 "transcription factor complex" evidence=IBA]
[GO:0003682 "chromatin binding" evidence=IBA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IBA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IBA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IBA] [GO:0008013
"beta-catenin binding" evidence=IBA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IBA]
[GO:0030902 "hindbrain development" evidence=IMP] [GO:0035284
"brain segmentation" evidence=IMP] [GO:0008284 "positive regulation
of cell proliferation" evidence=IGI] [GO:0021513 "spinal cord
dorsal/ventral patterning" evidence=IGI] [GO:0048699 "generation of
neurons" evidence=IGI] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 ZFIN:ZDB-GENE-991110-10
GO:GO:0008284 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0030901 GO:GO:0030902 GO:GO:0008013 GO:GO:0009880
GO:GO:0060070 GO:GO:0021903 GO:GO:0048699 GO:GO:0035284
HOGENOM:HOG000116032 HOVERGEN:HBG000419 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916 OrthoDB:EOG46MBJM
GO:GO:0010456 EMBL:AY221031 IPI:IPI00492715 RefSeq:NP_571371.1
UniGene:Dr.8108 ProteinModelPortal:Q800Q5 SMR:Q800Q5 STRING:Q800Q5
GeneID:30556 KEGG:dre:30556 CTD:30556 InParanoid:Q800Q5
NextBio:20806931 ArrayExpress:Q800Q5 Uniprot:Q800Q5
Length = 551
Score = 107 (42.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 23/87 (26%), Positives = 45/87 (51%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W +++ EE+ KYY++A ++R
Sbjct: 327 KKPLNAFMLYMKEMRAKVVAECT-LKENAAINQILGRRWHSLSREEQAKYYELARKERQL 385
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFD 154
+ + R GK + + D++ D
Sbjct: 386 HSQLYPGWSARDNYGKRKKRKRDNKTD 412
>UNIPROTKB|P70062 [details] [associations]
symbol:tcf7l1-a "Transcription factor 7-like 1-A"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0007275 GO:GO:0005737 GO:GO:0016055 GO:GO:0043565
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 PDB:1G3J PDBsum:1G3J
HOVERGEN:HBG000419 InterPro:IPR013558 PANTHER:PTHR10373
Pfam:PF08347 KO:K04490 EMBL:X99308 RefSeq:NP_001081483.1
UniGene:Xl.1100 ProteinModelPortal:P70062 SMR:P70062 IntAct:P70062
MINT:MINT-4790980 GeneID:397863 KEGG:xla:397863 CTD:397863
Xenbase:XB-GENE-6252329 EvolutionaryTrace:P70062 Uniprot:P70062
Length = 554
Score = 107 (42.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 23/90 (25%), Positives = 45/90 (50%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W +++ EE+ KYY++A ++R
Sbjct: 325 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHSLSREEQAKYYELARKERQL 383
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFDEYE 157
+ + R GK + + + + E E
Sbjct: 384 HSQLYPSWSARDNYGKRKKRKREKQSPEME 413
>UNIPROTKB|F1MJS2 [details] [associations]
symbol:TCF7L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0016055
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 OMA:TTVKDTR EMBL:DAAA02031141
EMBL:DAAA02031142 EMBL:DAAA02031143 IPI:IPI00999462
Ensembl:ENSBTAT00000013336 ArrayExpress:F1MJS2 Uniprot:F1MJS2
Length = 442
Score = 105 (42.0 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G KW ++ EE+ KYY++A ++R
Sbjct: 200 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRKWHNLSREEQAKYYELARKERQL 258
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFDE 155
+ + R GK + + + + +
Sbjct: 259 HSQLYPTWSARDNYGKKKKRKREKQLSQ 286
>UNIPROTKB|F1SVA7 [details] [associations]
symbol:TCF7L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000036 "regulation of stem cell maintenance"
evidence=IEA] [GO:0048319 "axial mesoderm morphogenesis"
evidence=IEA] [GO:0046022 "positive regulation of transcription
from RNA polymerase II promoter during mitosis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0008595 "anterior/posterior axis specification, embryo"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0005634 GO:GO:0045892 GO:GO:0043588 GO:GO:0016055
GO:GO:0003677 GO:GO:0008595 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0035019 GO:GO:0046022 GO:GO:0048319 GO:GO:2000036
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 OMA:TTVKDTR EMBL:CU951451
Ensembl:ENSSSCT00000009025 Uniprot:F1SVA7
Length = 442
Score = 105 (42.0 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G KW ++ EE+ KYY++A ++R
Sbjct: 201 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRKWHNLSREEQAKYYELARKERQL 259
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFDE 155
+ + R GK + + + + +
Sbjct: 260 HSQLYPTWSARDNYGKKKKRKREKQLSQ 287
>GENEDB_PFALCIPARUM|MAL8P1.72 [details] [associations]
symbol:MAL8P1.72 "high mobility group protein,
putative" species:5833 "Plasmodium falciparum" [GO:0006359
"regulation of transcription from RNA polymerase III promoter"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006359
EMBL:AL844507 HOGENOM:HOG000197861 HSSP:P11632
GenomeReviews:AL844507_GR ProtClustDB:PTZ00199
RefSeq:XP_001349346.1 ProteinModelPortal:Q8IB14 IntAct:Q8IB14
MINT:MINT-1562034 EnsemblProtists:MAL8P1.72:mRNA GeneID:2655422
KEGG:pfa:MAL8P1.72 EuPathDB:PlasmoDB:PF3D7_0817900 OMA:SAYMFYV
Uniprot:Q8IB14
Length = 99
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 23/83 (27%), Positives = 44/83 (53%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDI-KSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK+ +A+ ++++D R ++ P++ K + +GK GE W ++ +K Y EK+
Sbjct: 24 PKRALSAYMFYVKDKRLEIIKEKPELAKDVAQVGKLIGEAWGQLSPAQKAPY-----EKK 78
Query: 126 AEFDRAMADYIKRKENGKVENSE 148
A+ D+ Y K E + +N E
Sbjct: 79 AQLDKVR--YSKEIEEYRKKNQE 99
>UNIPROTKB|Q8IB14 [details] [associations]
symbol:PfHMGB2 "High mobility group protein" species:36329
"Plasmodium falciparum 3D7" [GO:0006359 "regulation of
transcription from RNA polymerase III promoter" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006359 EMBL:AL844507
HOGENOM:HOG000197861 HSSP:P11632 GenomeReviews:AL844507_GR
ProtClustDB:PTZ00199 RefSeq:XP_001349346.1
ProteinModelPortal:Q8IB14 IntAct:Q8IB14 MINT:MINT-1562034
EnsemblProtists:MAL8P1.72:mRNA GeneID:2655422 KEGG:pfa:MAL8P1.72
EuPathDB:PlasmoDB:PF3D7_0817900 OMA:SAYMFYV Uniprot:Q8IB14
Length = 99
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 23/83 (27%), Positives = 44/83 (53%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDI-KSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK+ +A+ ++++D R ++ P++ K + +GK GE W ++ +K Y EK+
Sbjct: 24 PKRALSAYMFYVKDKRLEIIKEKPELAKDVAQVGKLIGEAWGQLSPAQKAPY-----EKK 78
Query: 126 AEFDRAMADYIKRKENGKVENSE 148
A+ D+ Y K E + +N E
Sbjct: 79 AQLDKVR--YSKEIEEYRKKNQE 99
>UNIPROTKB|Q5JRY4 [details] [associations]
symbol:TCF7L2 "Transcription factor 7-like 2" species:9606
"Homo sapiens" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 HOGENOM:HOG000116032 HOVERGEN:HBG000419
PANTHER:PTHR10373 EMBL:AL135792 EMBL:AL158212 EMBL:AL445486
EMBL:AL451084 UniGene:Hs.593995 HGNC:HGNC:11641 ChiTaRS:TCF7L2
IPI:IPI00944473 SMR:Q5JRY4 Ensembl:ENST00000369389 Uniprot:Q5JRY4
Length = 176
Score = 101 (40.6 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 62 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 120
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 121 HMQLYPGWSARDNYGKKKKRKRDKQ 145
>UNIPROTKB|F1PYV9 [details] [associations]
symbol:TCF7L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 EMBL:AAEX03010938
Ensembl:ENSCAFT00000012528 Uniprot:F1PYV9
Length = 463
Score = 105 (42.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G KW ++ EE+ KYY++A ++R
Sbjct: 222 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRKWHNLSREEQAKYYELARKERQL 280
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFDE 155
+ + R GK + + + + +
Sbjct: 281 HSQLYPTWSARDNYGKKKKRKREKQLSQ 308
>ZFIN|ZDB-GENE-980605-30 [details] [associations]
symbol:tcf7l1a "transcription factor 7-like 1a
(T-cell specific, HMG-box)" species:7955 "Danio rerio" [GO:0016055
"Wnt receptor signaling pathway" evidence=IEA] [GO:0021903
"rostrocaudal neural tube patterning" evidence=IMP] [GO:0030901
"midbrain development" evidence=IMP] [GO:0010456 "cell
proliferation in dorsal spinal cord" evidence=IGI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IBA]
[GO:0043565 "sequence-specific DNA binding" evidence=IBA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IBA] [GO:0008013 "beta-catenin binding"
evidence=IBA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IBA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IBA] [GO:0003682 "chromatin
binding" evidence=IBA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IBA] [GO:0005667 "transcription factor
complex" evidence=IBA] [GO:0048596 "embryonic camera-type eye
morphogenesis" evidence=IGI] [GO:0060323 "head morphogenesis"
evidence=IMP] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0048699 "generation of neurons" evidence=IGI] [GO:0008284
"positive regulation of cell proliferation" evidence=IGI]
[GO:0021513 "spinal cord dorsal/ventral patterning" evidence=IGI]
[GO:0030900 "forebrain development" evidence=IGI] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 ZFIN:ZDB-GENE-980605-30
GO:GO:0008284 GO:GO:0043565 GO:GO:0030900 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0005667
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0030901 GO:GO:0008013 GO:GO:0030178
GO:GO:0060070 GO:GO:0021903 GO:GO:0048596 GO:GO:0048699
GO:GO:0060323 HOGENOM:HOG000116032 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916
GeneTree:ENSGT00390000009964 EMBL:AF097410 EMBL:BC053135
IPI:IPI00490974 RefSeq:NP_571344.1 UniGene:Dr.79155
ProteinModelPortal:Q9YHE8 SMR:Q9YHE8 STRING:Q9YHE8
Ensembl:ENSDART00000099262 GeneID:30523 KEGG:dre:30523 CTD:30523
InParanoid:Q9YHE8 KO:K04490 OMA:TTVKDTR OrthoDB:EOG46MBJM
NextBio:20806907 ArrayExpress:Q9YHE8 Bgee:Q9YHE8 GO:GO:0010456
Uniprot:Q9YHE8
Length = 560
Score = 106 (42.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 23/87 (26%), Positives = 44/87 (50%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W +++ EE+ KYY++A ++R
Sbjct: 330 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHSLSREEQAKYYELARKERQL 388
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFD 154
+ + R GK + + D + D
Sbjct: 389 HSQLYPGWSARDNYGKRKKRKRDCKSD 415
>UNIPROTKB|D4A535 [details] [associations]
symbol:D4A535 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Pfam:PF09011 GeneTree:ENSGT00560000076717
IPI:IPI00567139 Ensembl:ENSRNOT00000049646 Uniprot:D4A535
Length = 204
Score = 96 (38.9 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP ++ +F++ R+ ++Q+ D + K C E+WKTM+ +E ++ T
Sbjct: 6 PKKPRGKMLSYAFFVQTCREEHKKQHSDASVNFSEFSKKCSERWKTMSAKENRGIFEDMT 65
Query: 123 EK-RAEFDRAMADYIKRKENGK 143
+ +A ++R M Y+ E K
Sbjct: 66 KAGKASYEREMKTYLPPGETKK 87
Score = 34 (17.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 137 KRKENGKVENSEEDSEFDE 155
++KE E EED E ++
Sbjct: 177 EKKEEKDDEEDEEDEEEED 195
>UNIPROTKB|F1PX33 [details] [associations]
symbol:TCF7L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000036 "regulation of stem cell maintenance"
evidence=IEA] [GO:0048319 "axial mesoderm morphogenesis"
evidence=IEA] [GO:0046022 "positive regulation of transcription
from RNA polymerase II promoter during mitosis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0008595 "anterior/posterior axis specification, embryo"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0005634 GO:GO:0045892 GO:GO:0043588 GO:GO:0016055
GO:GO:0003677 GO:GO:0008595 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0035019 GO:GO:0046022 GO:GO:0048319 GO:GO:2000036
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 OMA:TTVKDTR EMBL:AAEX03010938
Ensembl:ENSCAFT00000012532 Uniprot:F1PX33
Length = 584
Score = 105 (42.0 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G KW ++ EE+ KYY++A ++R
Sbjct: 343 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRKWHNLSREEQAKYYELARKERQL 401
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFDE 155
+ + R GK + + + + +
Sbjct: 402 HSQLYPTWSARDNYGKKKKRKREKQLSQ 429
>UNIPROTKB|Q9HCS4 [details] [associations]
symbol:TCF7L1 "Transcription factor 7-like 1" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008595 "anterior/posterior axis specification,
embryo" evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046022 "positive regulation of transcription
from RNA polymerase II promoter during mitosis" evidence=IEA]
[GO:0048319 "axial mesoderm morphogenesis" evidence=IEA]
[GO:2000036 "regulation of stem cell maintenance" evidence=IEA]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IBA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IBA;NAS]
[GO:0006325 "chromatin organization" evidence=NAS] [GO:0030111
"regulation of Wnt receptor signaling pathway" evidence=NAS]
[GO:0003682 "chromatin binding" evidence=IBA] [GO:0005667
"transcription factor complex" evidence=IBA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
[GO:0008013 "beta-catenin binding" evidence=IBA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IBA] [GO:0022008
"neurogenesis" evidence=IBA] [GO:0043565 "sequence-specific DNA
binding" evidence=IBA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IBA] [GO:0048699 "generation of neurons"
evidence=IBA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IBA] InterPro:IPR009071 InterPro:IPR024940
Pfam:PF00505 GO:GO:0045892 GO:GO:0043588 GO:GO:0007420
GO:GO:0030111 GO:GO:0008595 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0005667
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0035019 GO:GO:0008013 GO:GO:0046022
GO:GO:0060070 GO:GO:0006325 GO:GO:0048699 GO:GO:0048319
GO:GO:2000036 HOGENOM:HOG000116032 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916
EMBL:AC093162 KO:K04490 OMA:TTVKDTR OrthoDB:EOG46MBJM EMBL:AB031046
EMBL:AC011236 EMBL:BC058894 EMBL:X62870 IPI:IPI00010396 PIR:S22806
RefSeq:NP_112573.1 UniGene:Hs.516297 ProteinModelPortal:Q9HCS4
SMR:Q9HCS4 STRING:Q9HCS4 PhosphoSite:Q9HCS4 DMDM:29337134
PRIDE:Q9HCS4 Ensembl:ENST00000282111 GeneID:83439 KEGG:hsa:83439
UCSC:uc002soy.3 CTD:83439 GeneCards:GC02P085272 HGNC:HGNC:11640
MIM:604652 neXtProt:NX_Q9HCS4 PharmGKB:PA36393 InParanoid:Q9HCS4
ChiTaRS:TCF7L1 GenomeRNAi:83439 NextBio:72314 ArrayExpress:Q9HCS4
Bgee:Q9HCS4 CleanEx:HS_TCF3 CleanEx:HS_TCF7L1 Genevestigator:Q9HCS4
GermOnline:ENSG00000152284 Uniprot:Q9HCS4
Length = 588
Score = 105 (42.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G KW ++ EE+ KYY++A ++R
Sbjct: 347 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRKWHNLSREEQAKYYELARKERQL 405
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFDE 155
+ + R GK + + + + +
Sbjct: 406 HSQLYPTWSARDNYGKKKKRKREKQLSQ 433
>UNIPROTKB|F1M1R9 [details] [associations]
symbol:LOC100361823 "Protein LOC100361823" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046022 "positive regulation of transcription from RNA
polymerase II promoter during mitosis" evidence=IEA] [GO:0048319
"axial mesoderm morphogenesis" evidence=IEA] [GO:2000036
"regulation of stem cell maintenance" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 RGD:2319352
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 IPI:IPI00768045
Ensembl:ENSRNOT00000020005 ArrayExpress:F1M1R9 Uniprot:F1M1R9
Length = 442
Score = 103 (41.3 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G KW ++ EE+ KYY++A ++R
Sbjct: 201 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRKWHNLSREEQAKYYELARKERQL 259
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFDE 155
+ + R GK + + + + +
Sbjct: 260 HAQLYPTWSARDNYGKKKKRKREKQLSQ 287
>RGD|2319352 [details] [associations]
symbol:LOC100361823 "transcription factor 3" species:10116
"Rattus norvegicus" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
RGD:2319352 GO:GO:0005634 GO:GO:0045892 GO:GO:0043588 GO:GO:0016055
GO:GO:0003677 GO:GO:0008595 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0035019 GO:GO:0046022 GO:GO:0048319 GO:GO:2000036
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 IPI:IPI00781056
Ensembl:ENSRNOT00000057962 ArrayExpress:F1M4H6 Uniprot:F1M4H6
Length = 456
Score = 103 (41.3 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G KW ++ EE+ KYY++A ++R
Sbjct: 215 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRKWHNLSREEQAKYYELARKERQL 273
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFDE 155
+ + R GK + + + + +
Sbjct: 274 HAQLYPTWSARDNYGKKKKRKREKQLSQ 301
>UNIPROTKB|Q5JRY5 [details] [associations]
symbol:TCF7L2 "Transcription factor 7-like 2" species:9606
"Homo sapiens" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 HOGENOM:HOG000116032 HOVERGEN:HBG000419
PANTHER:PTHR10373 EMBL:AL135792 EMBL:AL158212 EMBL:AL445486
EMBL:AL451084 UniGene:Hs.593995 HGNC:HGNC:11641 ChiTaRS:TCF7L2
SMR:Q5JRY5 Ensembl:ENST00000277945 Uniprot:Q5JRY5
Length = 207
Score = 101 (40.6 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 68 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 126
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 127 HMQLYPGWSARDNYGKKKKRKRDKQ 151
>WB|WBGene00001973 [details] [associations]
symbol:hmg-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IMP] [GO:0007413 "axonal
fasciculation" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] InterPro:IPR009071
InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
GO:GO:0005634 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0005694 GO:GO:0002119 GO:GO:0006355 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GO:GO:0010171 GO:GO:0040011 GO:GO:0040018 GO:GO:0048477
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0000910 GO:GO:0007413
GeneTree:ENSGT00700000104547 InterPro:IPR013719 Pfam:PF08512
EMBL:FO080198 eggNOG:COG5165 KO:K09272 InterPro:IPR024954
HOGENOM:HOG000180790 PIR:T34025 RefSeq:NP_491688.1
ProteinModelPortal:O01683 SMR:O01683 IntAct:O01683 STRING:O01683
PaxDb:O01683 PRIDE:O01683 EnsemblMetazoa:C32F10.5 GeneID:172250
KEGG:cel:CELE_C32F10.5 UCSC:C32F10.5 CTD:172250 WormBase:C32F10.5
InParanoid:O01683 OMA:KRATTAY NextBio:874675 Uniprot:O01683
Length = 689
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+ TA+ + R +E D ++ + K G KWK+M+ ++K ++ D A + +A
Sbjct: 561 PKRATTAYIIWFNANRNSMKE---DGDTLGDVAKKAGAKWKSMSADDKKEWNDKAAQDKA 617
Query: 127 EFDRAMADYIKRKENGKVENSEEDS 151
++ M +Y +K G VE + S
Sbjct: 618 RYEAEMKEY--KKNGGGVEKASGPS 640
>WB|WBGene00001974 [details] [associations]
symbol:hmg-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] InterPro:IPR009071
InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
GO:GO:0005634 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0005694 GO:GO:0002119 GO:GO:0006355 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GO:GO:0040011 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0040035 GO:GO:0007276
EMBL:FO081094 GeneTree:ENSGT00700000104547 InterPro:IPR013719
Pfam:PF08512 eggNOG:COG5165 KO:K09272 InterPro:IPR024954
HOGENOM:HOG000180790 OMA:PVEVKKG PIR:T16908 RefSeq:NP_498633.1
ProteinModelPortal:P41848 SMR:P41848 DIP:DIP-26608N
MINT:MINT-1083096 STRING:P41848 PaxDb:P41848
EnsemblMetazoa:T20B12.8 GeneID:176052 KEGG:cel:CELE_T20B12.8
UCSC:T20B12.8 CTD:176052 WormBase:T20B12.8 InParanoid:P41848
NextBio:890908 Uniprot:P41848
Length = 697
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
P P A +++ F E D S+ + K G KWKTM+ ++K K+ + A E ++
Sbjct: 553 PNAPKRATSAYMQWFLASRNELKEDGDSVADVAKKGGAKWKTMSSDDKKKWEEKAEEDKS 612
Query: 127 EFDRAMADYIKRKENGKVENSEEDS 151
+++ M +Y RK NG +S + S
Sbjct: 613 RYEKEMKEY--RK-NGPPSSSSKPS 634
>MGI|MGI:1202876 [details] [associations]
symbol:Tcf7l1 "transcription factor 7 like 1 (T cell
specific, HMG box)" species:10090 "Mus musculus" [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IBA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007420 "brain development" evidence=IBA]
[GO:0008013 "beta-catenin binding" evidence=IPI] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IBA]
[GO:0022008 "neurogenesis" evidence=IBA] [GO:0035019 "somatic stem
cell maintenance" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IBA] [GO:0043588 "skin development" evidence=IGI]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IBA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046022 "positive regulation of
transcription from RNA polymerase II promoter during mitosis"
evidence=IDA] [GO:0048319 "axial mesoderm morphogenesis"
evidence=IMP] [GO:0048699 "generation of neurons" evidence=IBA]
[GO:0048863 "stem cell differentiation" evidence=IMP] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IBA]
[GO:2000036 "regulation of stem cell maintenance" evidence=IMP]
InterPro:IPR009071 InterPro:IPR024940 MGI:MGI:1202876 Pfam:PF00505
GO:GO:0045892 GO:GO:0043588 GO:GO:0007420 GO:GO:0008595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0035019 GO:GO:0046022
GO:GO:0060070 GO:GO:0048699 GO:GO:0048319 GO:GO:2000036
HOVERGEN:HBG000419 InterPro:IPR013558 PANTHER:PTHR10373
Pfam:PF08347 eggNOG:NOG252916 KO:K04490 OrthoDB:EOG46MBJM CTD:83439
ChiTaRS:TCF7L1 EMBL:AJ223069 EMBL:AJ223233 EMBL:AF057691
IPI:IPI00135957 RefSeq:NP_001073290.1 RefSeq:NP_033358.2
UniGene:Mm.440067 ProteinModelPortal:Q9Z1J1 SMR:Q9Z1J1
IntAct:Q9Z1J1 STRING:Q9Z1J1 PhosphoSite:Q9Z1J1 PRIDE:Q9Z1J1
GeneID:21415 KEGG:mmu:21415 NextBio:300710 CleanEx:MM_TCF3
Genevestigator:Q9Z1J1 GermOnline:ENSMUSG00000055799 Uniprot:Q9Z1J1
Length = 584
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G KW ++ EE+ KYY++A ++R
Sbjct: 343 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRKWHNLSREEQAKYYELARKERQL 401
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFDE 155
+ + R GK + + + + +
Sbjct: 402 HAQLYPTWSARDNYGKKKKRKREKQLSQ 429
>RGD|1311671 [details] [associations]
symbol:Tcf7l1 "transcription factor 7-like 1 (T-cell specific,
HMG-box)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008595 "anterior/posterior
axis specification, embryo" evidence=ISO] [GO:0035019 "somatic stem
cell maintenance" evidence=ISO] [GO:0043588 "skin development"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046022 "positive regulation of
transcription from RNA polymerase II promoter during mitosis"
evidence=ISO] [GO:0048319 "axial mesoderm morphogenesis"
evidence=ISO] [GO:0048863 "stem cell differentiation" evidence=ISO]
[GO:2000036 "regulation of stem cell maintenance" evidence=ISO]
REFSEQ:NM_001107865 Ncbi:NP_001101335
Length = 587
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G KW ++ EE+ KYY++A ++R
Sbjct: 346 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRKWHNLSREEQAKYYELARKERQL 404
Query: 128 FDRAMADYIKRKENGKVENSEEDSEFDE 155
+ + R GK + + + + +
Sbjct: 405 HAQLYPTWSARDNYGKKKKRKREKQLSQ 432
>MGI|MGI:98512 [details] [associations]
symbol:Ubtf "upstream binding transcription factor, RNA
polymerase I" species:10090 "Mus musculus" [GO:0000183 "chromatin
silencing at rDNA" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IDA]
InterPro:IPR009071 MGI:MGI:98512 Pfam:PF00505 GO:GO:0005730
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000183 Pfam:PF09011
GO:GO:0045943 eggNOG:NOG327891 HOVERGEN:HBG008708
HOGENOM:HOG000232068 EMBL:X60831 IPI:IPI00114869 IPI:IPI00223407
PIR:S22314 UniGene:Mm.2845 PDB:1V63 PDB:1V64 PDB:1WGF PDBsum:1V63
PDBsum:1V64 PDBsum:1WGF ProteinModelPortal:P25976 SMR:P25976
DIP:DIP-29977N MINT:MINT-4084181 STRING:P25976 PhosphoSite:P25976
PaxDb:P25976 PRIDE:P25976 InParanoid:P25976
EvolutionaryTrace:P25976 Genevestigator:P25976
GermOnline:ENSMUSG00000020923 Uniprot:P25976
Length = 765
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 24/86 (27%), Positives = 45/86 (52%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A F F E+ R+ QE+ P++ S + + W +T ++K KY +A
Sbjct: 407 PKRPVSAMFIFSEEKRRQLQEERPEL-SESELTRLLARMWNDLTEKKKAKYKAREAALKA 465
Query: 127 EFDRAMADYIKRKENGKVENSEEDSE 152
+ +R +R++ GK+ S + +E
Sbjct: 466 QSERKPGG--EREDRGKLPESPKRAE 489
>TAIR|locus:2098413 [details] [associations]
symbol:HMG "high mobility group" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0035101 "FACT complex" evidence=IDA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=IMP]
[GO:0000394 "RNA splicing, via endonucleolytic cleavage and
ligation" evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010050 "vegetative phase
change" evidence=RCA] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0016246 "RNA interference"
evidence=RCA] [GO:0016569 "covalent chromatin modification"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] InterPro:IPR009071 InterPro:IPR000969
PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0010228 GO:GO:0005719 GO:GO:0035101
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5165 KO:K09272
InterPro:IPR024954 OMA:PVEVKKG EMBL:D13491 EMBL:AP002057
EMBL:BT002507 EMBL:AK318679 EMBL:AK221855 IPI:IPI00547320
IPI:IPI00931095 PIR:S35511 RefSeq:NP_189515.1 UniGene:At.21931
UniGene:At.48716 ProteinModelPortal:Q05153 SMR:Q05153 STRING:Q05153
PaxDb:Q05153 PRIDE:Q05153 EnsemblPlants:AT3G28730.1 GeneID:822505
KEGG:ath:AT3G28730 TAIR:At3g28730 HOGENOM:HOG000241245
InParanoid:Q05153 PhylomeDB:Q05153 ProtClustDB:CLSN2684068
Genevestigator:Q05153 GermOnline:AT3G28730 Uniprot:Q05153
Length = 646
Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
Identities = 27/129 (20%), Positives = 62/129 (48%)
Query: 24 LRKRPTRHSVVAAVGIEKEGKSISAXXXXXXXXXXXXXXXXXMPKKPPTAFFYFLEDFRK 83
++K P + + ++ G+ + K+++A PK+ + F +F + R
Sbjct: 520 IKKEPKKEAS-SSKGLPPKRKTVAADEGSSKRKKPKKKKDPNAPKRAMSGFMFFSQMERD 578
Query: 84 GFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGK 143
++++P I + +GK G+KW+ M+ ++K Y A + + ++DY K +
Sbjct: 579 NIKKEHPGI-AFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYKDEISDY-KNPQPMN 636
Query: 144 VEN-SEEDS 151
V++ ++ DS
Sbjct: 637 VDSGNDSDS 645
>UNIPROTKB|F1Q1X7 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 EMBL:AAEX03015533 EMBL:AAEX03015534
EMBL:AAEX03015535 Ensembl:ENSCAFT00000017507 Uniprot:F1Q1X7
Length = 260
Score = 101 (40.6 bits), Expect = 0.00016, P = 0.00016
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 157 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 215
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 216 HMQLYPGWSARDNYGKKKKRKRDKQ 240
>ZFIN|ZDB-GENE-991110-8 [details] [associations]
symbol:tcf7l2 "transcription factor 7-like 2 (T-cell
specific, HMG-box)" species:7955 "Danio rerio" [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IBA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IMP;IBA]
[GO:0005667 "transcription factor complex" evidence=IBA]
[GO:0022008 "neurogenesis" evidence=IBA] [GO:0008013 "beta-catenin
binding" evidence=IBA] [GO:0007420 "brain development"
evidence=IBA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IBA] [GO:0043565
"sequence-specific DNA binding" evidence=IBA] [GO:0003682
"chromatin binding" evidence=IBA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IBA] [GO:0048699
"generation of neurons" evidence=IBA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IBA]
[GO:0044333 "Wnt receptor signaling pathway involved in digestive
tract morphogenesis" evidence=IMP] [GO:0060729 "intestinal
epithelial structure maintenance" evidence=IMP] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 ZFIN:ZDB-GENE-991110-8
GO:GO:0007420 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
GO:GO:0003682 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0008013
GO:GO:0060070 GO:GO:0048699 HOGENOM:HOG000116032 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 GO:GO:0060729
EMBL:AF507958 IPI:IPI00499161 UniGene:Dr.67692
ProteinModelPortal:Q71G52 SMR:Q71G52 STRING:Q71G52
InParanoid:Q71G52 ArrayExpress:Q71G52 GO:GO:0044333 Uniprot:Q71G52
Length = 610
Score = 102 (41.0 bits), Expect = 0.00016, P = 0.00016
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 334 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 392
Query: 128 FDR------AMADYIKRKENGKVENSEEDSEFDEY 156
+ A +Y K+K+ + + + E +E EY
Sbjct: 393 HMQLYPGWSARDNYGKKKKRKREKQAGEGNEHREY 427
>UNIPROTKB|E9PKP7 [details] [associations]
symbol:UBTF "Nucleolar transcription factor 1" species:9606
"Homo sapiens" [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005730 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 EMBL:AC004596
Pfam:PF09011 HGNC:HGNC:12511 ChiTaRS:UBTF IPI:IPI00979797
ProteinModelPortal:E9PKP7 SMR:E9PKP7 Ensembl:ENST00000527034
ArrayExpress:E9PKP7 Bgee:E9PKP7 Uniprot:E9PKP7
Length = 745
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 24/86 (27%), Positives = 45/86 (52%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A F F E+ R+ QE+ P++ S + + W ++ ++K KY +A
Sbjct: 370 PKRPVSAMFIFSEEKRRQLQEERPEL-SESELTRLLARMWNDLSEKKKAKYKAREAALKA 428
Query: 127 EFDRAMADYIKRKENGKVENSEEDSE 152
+ +R +R+E GK+ S + +E
Sbjct: 429 QSERKPGG--EREERGKLPESPKRAE 452
>UNIPROTKB|P17480 [details] [associations]
symbol:UBTF "Nucleolar transcription factor 1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0001832
"blastocyst growth" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007566 "embryo implantation" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045943 "positive
regulation of transcription from RNA polymerase I promoter"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0006356
"regulation of transcription from RNA polymerase I promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006360
"transcription from RNA polymerase I promoter" evidence=TAS]
[GO:0006361 "transcription initiation from RNA polymerase I
promoter" evidence=TAS] [GO:0006362 "transcription elongation from
RNA polymerase I promoter" evidence=TAS] [GO:0006363 "termination
of RNA polymerase I transcription" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR009071
Pfam:PF00505 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Reactome:REACT_1788 GO:GO:0006363 GO:GO:0006362 GO:GO:0006361
Pfam:PF09011 GO:GO:0045943 KO:K09273 eggNOG:NOG327891
HOVERGEN:HBG008708 EMBL:X53390 EMBL:X53461 EMBL:X56687
EMBL:AK291733 EMBL:AK292518 EMBL:BC042297 IPI:IPI00014533
IPI:IPI00220833 PIR:S09318 PIR:S18193 RefSeq:NP_001070151.1
RefSeq:NP_001070152.1 RefSeq:NP_055048.1 UniGene:Hs.89781 PDB:1K99
PDB:1L8Y PDB:1L8Z PDB:2HDZ PDBsum:1K99 PDBsum:1L8Y PDBsum:1L8Z
PDBsum:2HDZ ProteinModelPortal:P17480 SMR:P17480 DIP:DIP-640N
IntAct:P17480 MINT:MINT-1348764 STRING:P17480 PhosphoSite:P17480
DMDM:136652 PaxDb:P17480 PRIDE:P17480 Ensembl:ENST00000302904
Ensembl:ENST00000343638 Ensembl:ENST00000393606
Ensembl:ENST00000436088 Ensembl:ENST00000526094
Ensembl:ENST00000529383 Ensembl:ENST00000533177 GeneID:7343
KEGG:hsa:7343 UCSC:uc002igc.3 UCSC:uc010czs.3 CTD:7343
GeneCards:GC17M042282 HGNC:HGNC:12511 HPA:CAB004611 HPA:HPA006385
MIM:600673 neXtProt:NX_P17480 PharmGKB:PA37158 HOGENOM:HOG000232068
InParanoid:P17480 OMA:CSQRWKL OrthoDB:EOG4V9TQ9 PhylomeDB:P17480
ChiTaRS:UBTF EvolutionaryTrace:P17480 GenomeRNAi:7343 NextBio:28746
ArrayExpress:P17480 Bgee:P17480 CleanEx:HS_UBTF
Genevestigator:P17480 GermOnline:ENSG00000108312 Uniprot:P17480
Length = 764
Score = 103 (41.3 bits), Expect = 0.00017, P = 0.00017
Identities = 24/86 (27%), Positives = 45/86 (52%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A F F E+ R+ QE+ P++ S + + W ++ ++K KY +A
Sbjct: 407 PKRPVSAMFIFSEEKRRQLQEERPEL-SESELTRLLARMWNDLSEKKKAKYKAREAALKA 465
Query: 127 EFDRAMADYIKRKENGKVENSEEDSE 152
+ +R +R+E GK+ S + +E
Sbjct: 466 QSERKPGG--EREERGKLPESPKRAE 489
>ZFIN|ZDB-GENE-030131-1665 [details] [associations]
symbol:wdhd1 "WD repeat and HMG-box DNA binding
protein 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR009071 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pfam:PF00505 ZFIN:ZDB-GENE-030131-1665
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00390000002030 KO:K11274
InterPro:IPR022100 Pfam:PF12341 InterPro:IPR013979 Pfam:PF08662
CTD:11169 EMBL:CU464134 IPI:IPI00919874 RefSeq:NP_001002726.2
UniGene:Dr.52170 Ensembl:ENSDART00000110507
Ensembl:ENSDART00000133710 GeneID:436999 KEGG:dre:436999
NextBio:20831417 Uniprot:E7F296
Length = 1112
Score = 104 (41.7 bits), Expect = 0.00020, P = 0.00020
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP T F +LE+ RK NPD + M I + G +++T++ EE++ + TEK A+
Sbjct: 1010 KKPKTGFQLWLEENRKSILADNPDFEEMDVIKEGMG-RFRTLSAEERLNW----TEK-AK 1063
Query: 128 FDRAMADYIKRK-ENGKVENSEEDSEFDE 155
D +D KRK E+ E + E E DE
Sbjct: 1064 GD---SDPKKRKREDEDEEKAAEQMESDE 1089
>UNIPROTKB|F1M607 [details] [associations]
symbol:F1M607 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071
InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Pfam:PF09011 GeneTree:ENSGT00560000076717
IPI:IPI00558117 Ensembl:ENSRNOT00000046997 Uniprot:F1M607
Length = 211
Score = 91 (37.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPD-IKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PKKP + + ++++PD + K C E+WKTM+ +EK ++ ++A K
Sbjct: 6 PKKPRGKMSSYTFFGGEEHEKKHPDAFVNFLEFSKKCSERWKTMSAKEKGEFENMAKAK- 64
Query: 126 AEFDRAMADYIKRKENGK 143
A +R M YI K K
Sbjct: 65 ARHEREMKTYISPKGETK 82
Score = 40 (19.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 137 KRKENGKVENSEEDSEFDEYE 157
K+KE E+ E++ E +E E
Sbjct: 179 KKKEEDDEEDEEDEEEEEEKE 199
>FB|FBgn0010228 [details] [associations]
symbol:HmgZ "HMG protein Z" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] InterPro:IPR009071 Pfam:PF00505
EMBL:AE013599 GO:GO:0005634 GO:GO:0005694 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
eggNOG:NOG320947 GeneTree:ENSGT00700000104547 EMBL:X71139
EMBL:AY113439 PIR:S41765 RefSeq:NP_726106.1 RefSeq:NP_726107.1
UniGene:Dm.20604 ProteinModelPortal:Q06943 SMR:Q06943 PaxDb:Q06943
PRIDE:Q06943 EnsemblMetazoa:FBtr0071673 EnsemblMetazoa:FBtr0071674
GeneID:37480 KEGG:dme:Dmel_CG17921 CTD:37480 FlyBase:FBgn0010228
InParanoid:Q06943 OMA:EANGGTD OrthoDB:EOG4W0VWS PhylomeDB:Q06943
ChiTaRS:HmgZ GenomeRNAi:37480 NextBio:803858 Bgee:Q06943
GermOnline:CG17921 Uniprot:Q06943
Length = 111
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 19/69 (27%), Positives = 41/69 (59%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ +L + R+ ++ NP K + I K GE W+ + ++K ++ A + +
Sbjct: 6 PKRPLSAYMLWLNETREQIKKDNPGSK-VTDIAKRGGELWRGL--KDKTEWEQKAIKMKE 62
Query: 127 EFDRAMADY 135
E+++A+ +Y
Sbjct: 63 EYNKAVKEY 71
>UNIPROTKB|E2GH20 [details] [associations]
symbol:TCF7L2 "T-cell factor-4 variant X2" species:9606
"Homo sapiens" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 PANTHER:PTHR10373 EMBL:AL135792 EMBL:AL158212
EMBL:AL445486 EMBL:AL451084 UniGene:Hs.593995 HGNC:HGNC:11641
ChiTaRS:TCF7L2 EMBL:HM352845 IPI:IPI01014645 SMR:E2GH20
Ensembl:ENST00000542695 UCSC:uc021pyg.1 Uniprot:E2GH20
Length = 335
Score = 101 (40.6 bits), Expect = 0.00026, P = 0.00026
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 67 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 125
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 126 HMQLYPGWSARDNYGKKKKRKRDKQ 150
>UNIPROTKB|F1MUJ1 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0016055
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 EMBL:DAAA02059239 EMBL:DAAA02059240
EMBL:DAAA02059241 EMBL:DAAA02059242 EMBL:DAAA02059243
IPI:IPI01028215 Ensembl:ENSBTAT00000028748 Uniprot:F1MUJ1
Length = 338
Score = 101 (40.6 bits), Expect = 0.00026, P = 0.00026
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 224 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 282
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 283 HMQLYPGWSARDNYGKKKKRKRDKQ 307
>UNIPROTKB|F1NEB2 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 PANTHER:PTHR10373 GeneTree:ENSGT00390000009964
EMBL:AADN02030905 EMBL:AADN02030906 EMBL:AADN02030907
EMBL:AADN02030908 EMBL:AADN02030909 IPI:IPI00581399
Ensembl:ENSGALT00000033105 ArrayExpress:F1NEB2 Uniprot:F1NEB2
Length = 339
Score = 101 (40.6 bits), Expect = 0.00027, P = 0.00027
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 105 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 163
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 164 HMQLYPGWSARDNYGKKKKRKRDKQ 188
>UNIPROTKB|G3MX34 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0070369 "beta-catenin-TCF7L2
complex" evidence=IEA] [GO:0070016 "armadillo repeat domain
binding" evidence=IEA] [GO:0061178 "regulation of insulin secretion
involved in cellular response to glucose stimulus" evidence=IEA]
[GO:0060325 "face morphogenesis" evidence=IEA] [GO:0051897
"positive regulation of protein kinase B signaling cascade"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048713 "regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0048660
"regulation of smooth muscle cell proliferation" evidence=IEA]
[GO:0048641 "regulation of skeletal muscle tissue development"
evidence=IEA] [GO:0048625 "myoblast cell fate commitment"
evidence=IEA] [GO:0048619 "embryonic hindgut morphogenesis"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0046827 "positive regulation of protein export
from nucleus" evidence=IEA] [GO:0046621 "negative regulation of
organ growth" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045599 "negative regulation of fat cell differentiation"
evidence=IEA] [GO:0045444 "fat cell differentiation" evidence=IEA]
[GO:0045295 "gamma-catenin binding" evidence=IEA] [GO:0044334
"canonical Wnt receptor signaling pathway involved in positive
regulation of epithelial to mesenchymal transition" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0043570 "maintenance of DNA repeat elements" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0040037 "negative regulation of fibroblast growth factor
receptor signaling pathway" evidence=IEA] [GO:0035411 "catenin
import into nucleus" evidence=IEA] [GO:0035257 "nuclear hormone
receptor binding" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0032350 "regulation of hormone metabolic process"
evidence=IEA] [GO:0032252 "secretory granule localization"
evidence=IEA] [GO:0032092 "positive regulation of protein binding"
evidence=IEA] [GO:0032024 "positive regulation of insulin
secretion" evidence=IEA] [GO:0031641 "regulation of myelination"
evidence=IEA] [GO:0030538 "embryonic genitalia morphogenesis"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0030282 "bone mineralization"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0010909 "positive
regulation of heparan sulfate proteoglycan biosynthetic process"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0007050 "cell
cycle arrest" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 GO:GO:0046827 GO:GO:0043588
GO:GO:0032092 GO:GO:0008283 GO:GO:0043565 GO:GO:0045944
GO:GO:0032024 GO:GO:0003700 GO:GO:0007050 GO:GO:0003682
GO:GO:0042593 GO:GO:0005667 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0043065 GO:GO:0048641 GO:GO:0051897 GO:GO:0045599
GO:GO:0042475 GO:GO:0043433 GO:GO:0090090 GO:GO:0035019
GO:GO:0001568 GO:GO:0045444 GO:GO:0021915 GO:GO:0021983
GO:GO:0030282 GO:GO:0048660 GO:GO:0035411 GO:GO:0060325
GO:GO:0046621 GO:GO:0014003 GO:GO:0043570 GO:GO:0050679
GO:GO:0032993 GO:GO:0030514 GO:GO:0048619 GO:GO:0061178
GO:GO:0031641 GO:GO:0040037 GO:GO:0070369 GO:GO:0044334
GO:GO:0010909 GO:GO:0048713 GO:GO:0048625 GO:GO:0048557
GO:GO:0030538 GO:GO:0032350 GO:GO:0032252 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 GeneTree:ENSGT00390000009964
EMBL:DAAA02059239 EMBL:DAAA02059240 EMBL:DAAA02059241
EMBL:DAAA02059242 EMBL:DAAA02059243 Ensembl:ENSBTAT00000065150
OMA:PRDTILV Uniprot:G3MX34
Length = 371
Score = 101 (40.6 bits), Expect = 0.00031, P = 0.00031
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 257 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 315
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 316 HMQLYPGWSARDNYGKKKKRKRDKQ 340
>WB|WBGene00001972 [details] [associations]
symbol:hmg-1.2 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0007126 "meiosis" evidence=IMP] [GO:0001708 "cell fate
specification" evidence=IMP] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IGI] [GO:0008406 "gonad development"
evidence=IMP] [GO:0040025 "vulval development" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0001708 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040010 GO:GO:0008406 GO:GO:0016055 GO:GO:0003677
GO:GO:0010171 GO:GO:0040018 eggNOG:COG5648 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 EMBL:FO080618
GO:GO:0040035 GO:GO:0040025 Pfam:PF09011 EMBL:AF056577 PIR:T43009
RefSeq:NP_001022599.1 RefSeq:NP_001022600.1 RefSeq:NP_498375.1
UniGene:Cel.10345 ProteinModelPortal:Q09390 SMR:Q09390
IntAct:Q09390 STRING:Q09390 PaxDb:Q09390 PRIDE:Q09390
EnsemblMetazoa:F47D12.4a.1 EnsemblMetazoa:F47D12.4a.2 GeneID:175890
KEGG:cel:CELE_F47D12.4 UCSC:F47D12.4a.1 CTD:175890
WormBase:F47D12.4a WormBase:F47D12.4b WormBase:F47D12.4c
GeneTree:ENSGT00560000076898 HOGENOM:HOG000197861 InParanoid:Q09390
KO:K11295 OMA:GEDAMRK NextBio:890170 Uniprot:Q09390
Length = 235
Score = 99 (39.9 bits), Expect = 0.00036, P = 0.00036
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 68 KKPPTAFFYFL--EDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
K P FF + E+ +K + +N + I K C EKWKTM +EK ++Y++A +K
Sbjct: 48 KTSPYGFFVKMCYEEHKKKYPNENVQVTE---ISKKCSEKWKTMVDDEKRRFYELA-QKD 103
Query: 126 AE 127
AE
Sbjct: 104 AE 105
>UNIPROTKB|H0YAR8 [details] [associations]
symbol:TCF7 "Transcription factor 7" species:9606 "Homo
sapiens" [GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0016055
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
PANTHER:PTHR10373 HGNC:HGNC:11639 ChiTaRS:TCF7 EMBL:AC008608
EMBL:AC011336 Ensembl:ENST00000517799 Bgee:H0YAR8 Uniprot:H0YAR8
Length = 147
Score = 95 (38.5 bits), Expect = 0.00038, P = 0.00038
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 68 KKPPTAFFYFLEDFR-KGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
KKP AF ++++ R K E +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 48 KKPLNAFMLYMKEMRAKVIAECT--LKESAAINQILGRRWHALSREEQAKYYELARKERQ 105
Query: 127 EFDRAMADYIKRKENGK 143
+ + R GK
Sbjct: 106 LHMQLYPGWSARDNYGK 122
>UNIPROTKB|F1Q1X1 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 EMBL:AAEX03015533 EMBL:AAEX03015534
EMBL:AAEX03015535 Ensembl:ENSCAFT00000017515 Uniprot:F1Q1X1
Length = 438
Score = 101 (40.6 bits), Expect = 0.00040, P = 0.00040
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 166 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 224
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 225 HMQLYPGWSARDNYGKKKKRKRDKQ 249
>UNIPROTKB|F1NEB1 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 EMBL:AADN02030905 EMBL:AADN02030906
EMBL:AADN02030907 EMBL:AADN02030908 EMBL:AADN02030909
IPI:IPI00818186 Ensembl:ENSGALT00000033106 ArrayExpress:F1NEB1
Uniprot:F1NEB1
Length = 450
Score = 101 (40.6 bits), Expect = 0.00041, P = 0.00041
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 180 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 238
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 239 HMQLYPGWSARDNYGKKKKRKRDKQ 263
>MGI|MGI:1202879 [details] [associations]
symbol:Tcf7l2 "transcription factor 7 like 2, T cell
specific, HMG box" species:10090 "Mus musculus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=ISO] [GO:0001103
"RNA polymerase II repressing transcription factor binding"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IBA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=ISO;IMP]
[GO:0007050 "cell cycle arrest" evidence=ISO] [GO:0008013
"beta-catenin binding" evidence=ISO;IDA;IPI] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0009749 "response to glucose
stimulus" evidence=IMP] [GO:0010909 "positive regulation of heparan
sulfate proteoglycan biosynthetic process" evidence=ISO]
[GO:0014003 "oligodendrocyte development" evidence=IMP] [GO:0016055
"Wnt receptor signaling pathway" evidence=IGI;IDA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0021915 "neural tube
development" evidence=IGI] [GO:0021983 "pituitary gland
development" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IGI] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IMP] [GO:0030538 "embryonic genitalia
morphogenesis" evidence=IGI] [GO:0031641 "regulation of
myelination" evidence=IMP] [GO:0032024 "positive regulation of
insulin secretion" evidence=ISO;IMP] [GO:0032092 "positive
regulation of protein binding" evidence=ISO] [GO:0032252 "secretory
granule localization" evidence=IMP] [GO:0032350 "regulation of
hormone metabolic process" evidence=ISO] [GO:0032993 "protein-DNA
complex" evidence=ISO] [GO:0035019 "somatic stem cell maintenance"
evidence=IGI;IMP] [GO:0035257 "nuclear hormone receptor binding"
evidence=ISO] [GO:0035411 "catenin import into nucleus"
evidence=IDA] [GO:0040037 "negative regulation of fibroblast growth
factor receptor signaling pathway" evidence=IMP] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IGI]
[GO:0042593 "glucose homeostasis" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IBA;IDA]
[GO:0043570 "maintenance of DNA repeat elements" evidence=ISO]
[GO:0043588 "skin development" evidence=IGI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO;IDA;IBA]
[GO:0044334 "canonical Wnt receptor signaling pathway involved in
positive regulation of epithelial to mesenchymal transition"
evidence=ISO] [GO:0045295 "gamma-catenin binding" evidence=ISO]
[GO:0045444 "fat cell differentiation" evidence=ISO] [GO:0045599
"negative regulation of fat cell differentiation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IDA] [GO:0046621 "negative regulation of organ
growth" evidence=IMP] [GO:0046827 "positive regulation of protein
export from nucleus" evidence=ISO] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0048619 "embryonic hindgut
morphogenesis" evidence=IGI] [GO:0048625 "myoblast cell fate
commitment" evidence=ISO;IMP] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IMP] [GO:0048660 "regulation of
smooth muscle cell proliferation" evidence=ISO] [GO:0048713
"regulation of oligodendrocyte differentiation" evidence=IMP]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0051897 "positive regulation of protein kinase B
signaling cascade" evidence=ISO] [GO:0060070 "canonical Wnt
receptor signaling pathway" evidence=IMP] [GO:0060325 "face
morphogenesis" evidence=IGI] [GO:0061178 "regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=ISO;IMP] [GO:0070016 "armadillo repeat domain binding"
evidence=ISO] [GO:0070369 "beta-catenin-TCF7L2 complex"
evidence=ISO] [GO:0071664 "catenin-TCF7L2 complex" evidence=IDA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR009071
InterPro:IPR024940 MGI:MGI:1202879 Pfam:PF00505 GO:GO:0005829
GO:GO:0043588 GO:GO:0016605 GO:GO:0009749 GO:GO:0043565
GO:GO:0045944 GO:GO:0032024 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0043065
GO:GO:0048641 GO:GO:0045599 GO:GO:0042475 GO:GO:0035019
GO:GO:0021915 GO:GO:0021983 GO:GO:0030282 GO:GO:0008013
GO:GO:0035411 GO:GO:0060325 GO:GO:0046621 GO:GO:0060070
GO:GO:0014003 GO:GO:0050679 GO:GO:0030514 GO:GO:0048619
GO:GO:0061178 GO:GO:0031641 GO:GO:0040037 GO:GO:0048713
GO:GO:0048625 GO:GO:0048557 GO:GO:0030538 GO:GO:0032252
CleanEx:MM_TCF4 HOGENOM:HOG000116032 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916
GeneTree:ENSGT00390000009964 CTD:6934 KO:K04491 OrthoDB:EOG43XV3J
ChiTaRS:TCF7L2 EMBL:AJ223070 EMBL:AF107298 EMBL:AF107299
EMBL:AF363722 EMBL:AF363724 EMBL:AF363725 EMBL:AF363726
EMBL:AY072035 EMBL:AK048536 EMBL:AC118695 EMBL:AC137148
EMBL:AC157916 IPI:IPI00129307 IPI:IPI00224936 IPI:IPI00224938
IPI:IPI00224939 IPI:IPI00224941 IPI:IPI00830945 IPI:IPI00831494
IPI:IPI00831648 IPI:IPI00918384 RefSeq:NP_001136390.1
RefSeq:NP_001136393.1 RefSeq:NP_001136396.1 UniGene:Mm.139815
ProteinModelPortal:Q924A0 SMR:Q924A0 DIP:DIP-40920N IntAct:Q924A0
MINT:MINT-421706 STRING:Q924A0 PhosphoSite:Q924A0 PRIDE:Q924A0
Ensembl:ENSMUST00000111646 Ensembl:ENSMUST00000111649
Ensembl:ENSMUST00000111651 Ensembl:ENSMUST00000111652
Ensembl:ENSMUST00000111659 GeneID:21416 KEGG:mmu:21416
UCSC:uc008hya.2 UCSC:uc008hyb.2 UCSC:uc008hyh.2 UCSC:uc008hyk.2
UCSC:uc008hyl.2 NextBio:300716 Bgee:Q924A0 Genevestigator:Q924A0
GermOnline:ENSMUSG00000024985 GO:GO:0071664 Uniprot:Q924A0
Length = 459
Score = 101 (40.6 bits), Expect = 0.00042, P = 0.00042
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 328 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 386
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 387 HMQLYPGWSARDNYGKKKKRKRDKQ 411
>RGD|1583621 [details] [associations]
symbol:Tcf7l2 "transcription factor 7-like 2 (T-cell specific,
HMG-box)" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=ISO;IBA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IBA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=ISO;IBA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;IBA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IBA] [GO:0007050 "cell cycle arrest"
evidence=ISO] [GO:0007420 "brain development" evidence=IBA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IBA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=ISO] [GO:0010909 "positive regulation of heparan sulfate
proteoglycan biosynthetic process" evidence=ISO] [GO:0014003
"oligodendrocyte development" evidence=ISO] [GO:0016055 "Wnt
receptor signaling pathway" evidence=ISO;IBA] [GO:0019901 "protein
kinase binding" evidence=ISO] [GO:0021915 "neural tube development"
evidence=ISO] [GO:0021983 "pituitary gland development"
evidence=ISO] [GO:0022008 "neurogenesis" evidence=IBA] [GO:0030282
"bone mineralization" evidence=ISO] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=ISO] [GO:0030538
"embryonic genitalia morphogenesis" evidence=ISO] [GO:0031641
"regulation of myelination" evidence=ISO] [GO:0032024 "positive
regulation of insulin secretion" evidence=ISO] [GO:0032092
"positive regulation of protein binding" evidence=ISO] [GO:0032252
"secretory granule localization" evidence=ISO] [GO:0032350
"regulation of hormone metabolic process" evidence=ISO] [GO:0032993
"protein-DNA complex" evidence=ISO] [GO:0035019 "somatic stem cell
maintenance" evidence=ISO] [GO:0035257 "nuclear hormone receptor
binding" evidence=ISO] [GO:0035411 "catenin import into nucleus"
evidence=ISO] [GO:0040037 "negative regulation of fibroblast growth
factor receptor signaling pathway" evidence=ISO] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISO]
[GO:0042593 "glucose homeostasis" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IBA]
[GO:0043570 "maintenance of DNA repeat elements" evidence=ISO]
[GO:0043588 "skin development" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO;IBA]
[GO:0044334 "canonical Wnt receptor signaling pathway involved in
positive regulation of epithelial to mesenchymal transition"
evidence=ISO] [GO:0045295 "gamma-catenin binding" evidence=ISO]
[GO:0045444 "fat cell differentiation" evidence=ISO] [GO:0045599
"negative regulation of fat cell differentiation" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046621 "negative regulation of organ growth" evidence=ISO]
[GO:0046827 "positive regulation of protein export from nucleus"
evidence=ISO] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=ISO] [GO:0048619 "embryonic hindgut morphogenesis"
evidence=ISO] [GO:0048625 "myoblast cell fate commitment"
evidence=ISO] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=ISO] [GO:0048660 "regulation of smooth muscle
cell proliferation" evidence=ISO] [GO:0048699 "generation of
neurons" evidence=IBA] [GO:0048713 "regulation of oligodendrocyte
differentiation" evidence=ISO] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISO] [GO:0051897 "positive
regulation of protein kinase B signaling cascade" evidence=ISO]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IBA] [GO:0060325 "face morphogenesis" evidence=ISO]
[GO:0061178 "regulation of insulin secretion involved in cellular
response to glucose stimulus" evidence=ISO;IMP] [GO:0070016
"armadillo repeat domain binding" evidence=ISO] [GO:0070369
"beta-catenin-TCF7L2 complex" evidence=ISO] [GO:0071664
"catenin-TCF7L2 complex" evidence=ISO] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=ISO] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
RGD:1583621 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
GO:GO:0003682 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0008013
GO:GO:0060070 GO:GO:0061178 GO:GO:0048699 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 IPI:IPI00202300
Ensembl:ENSRNOT00000019655 UCSC:RGD:1583621 ArrayExpress:D4A9H4
Uniprot:D4A9H4
Length = 459
Score = 101 (40.6 bits), Expect = 0.00042, P = 0.00042
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 328 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 386
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 387 HMQLYPGWSARDNYGKKKKRKRDKQ 411
>UNIPROTKB|E1BYU0 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007050 "cell
cycle arrest" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010909 "positive regulation of heparan sulfate proteoglycan
biosynthetic process" evidence=IEA] [GO:0014003 "oligodendrocyte
development" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0030282
"bone mineralization" evidence=IEA] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=IEA] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IEA] [GO:0031641
"regulation of myelination" evidence=IEA] [GO:0032024 "positive
regulation of insulin secretion" evidence=IEA] [GO:0032092
"positive regulation of protein binding" evidence=IEA] [GO:0032252
"secretory granule localization" evidence=IEA] [GO:0032350
"regulation of hormone metabolic process" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0035257 "nuclear hormone receptor
binding" evidence=IEA] [GO:0035411 "catenin import into nucleus"
evidence=IEA] [GO:0040037 "negative regulation of fibroblast growth
factor receptor signaling pathway" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043570 "maintenance of DNA repeat elements" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0044334 "canonical Wnt receptor signaling pathway involved in
positive regulation of epithelial to mesenchymal transition"
evidence=IEA] [GO:0045295 "gamma-catenin binding" evidence=IEA]
[GO:0045444 "fat cell differentiation" evidence=IEA] [GO:0045599
"negative regulation of fat cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046621 "negative
regulation of organ growth" evidence=IEA] [GO:0046827 "positive
regulation of protein export from nucleus" evidence=IEA]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IEA]
[GO:0048619 "embryonic hindgut morphogenesis" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0048641 "regulation of skeletal muscle tissue development"
evidence=IEA] [GO:0048660 "regulation of smooth muscle cell
proliferation" evidence=IEA] [GO:0048713 "regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0050679
"positive regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051897 "positive regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0060325 "face morphogenesis"
evidence=IEA] [GO:0061178 "regulation of insulin secretion involved
in cellular response to glucose stimulus" evidence=IEA] [GO:0070016
"armadillo repeat domain binding" evidence=IEA] [GO:0070369
"beta-catenin-TCF7L2 complex" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0046827 GO:GO:0032092 GO:GO:0008283 GO:GO:0043565
GO:GO:0045944 GO:GO:0032024 GO:GO:0003700 GO:GO:0007050
GO:GO:0003682 GO:GO:0042593 GO:GO:0005667 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0043065 GO:GO:0048641 GO:GO:0051897
GO:GO:0045599 GO:GO:0043433 GO:GO:0090090 GO:GO:0045444
GO:GO:0048660 GO:GO:0035411 GO:GO:0046621 GO:GO:0043570
GO:GO:0050679 GO:GO:0032993 GO:GO:0030514 GO:GO:0061178
GO:GO:0031641 GO:GO:0040037 GO:GO:0070369 GO:GO:0044334
GO:GO:0010909 GO:GO:0032350 GO:GO:0032252 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 GeneTree:ENSGT00390000009964
OMA:EPWCLES EMBL:AADN02030905 EMBL:AADN02030906 EMBL:AADN02030907
EMBL:AADN02030908 EMBL:AADN02030909 IPI:IPI00684907
Ensembl:ENSGALT00000014436 ArrayExpress:E1BYU0 Uniprot:E1BYU0
Length = 468
Score = 101 (40.6 bits), Expect = 0.00044, P = 0.00044
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 198 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 256
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 257 HMQLYPGWSARDNYGKKKKRKRDKQ 281
>UNIPROTKB|F1S5J6 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0070369 "beta-catenin-TCF7L2
complex" evidence=IEA] [GO:0070016 "armadillo repeat domain
binding" evidence=IEA] [GO:0061178 "regulation of insulin secretion
involved in cellular response to glucose stimulus" evidence=IEA]
[GO:0060325 "face morphogenesis" evidence=IEA] [GO:0051897
"positive regulation of protein kinase B signaling cascade"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048713 "regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0048660
"regulation of smooth muscle cell proliferation" evidence=IEA]
[GO:0048641 "regulation of skeletal muscle tissue development"
evidence=IEA] [GO:0048625 "myoblast cell fate commitment"
evidence=IEA] [GO:0048619 "embryonic hindgut morphogenesis"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0046827 "positive regulation of protein export
from nucleus" evidence=IEA] [GO:0046621 "negative regulation of
organ growth" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045599 "negative regulation of fat cell differentiation"
evidence=IEA] [GO:0045444 "fat cell differentiation" evidence=IEA]
[GO:0045295 "gamma-catenin binding" evidence=IEA] [GO:0044334
"canonical Wnt receptor signaling pathway involved in positive
regulation of epithelial to mesenchymal transition" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0043570 "maintenance of DNA repeat elements" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0040037 "negative regulation of fibroblast growth factor
receptor signaling pathway" evidence=IEA] [GO:0035411 "catenin
import into nucleus" evidence=IEA] [GO:0035257 "nuclear hormone
receptor binding" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0032350 "regulation of hormone metabolic process"
evidence=IEA] [GO:0032252 "secretory granule localization"
evidence=IEA] [GO:0032092 "positive regulation of protein binding"
evidence=IEA] [GO:0032024 "positive regulation of insulin
secretion" evidence=IEA] [GO:0031641 "regulation of myelination"
evidence=IEA] [GO:0030538 "embryonic genitalia morphogenesis"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0030282 "bone mineralization"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0010909 "positive
regulation of heparan sulfate proteoglycan biosynthetic process"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0007050 "cell
cycle arrest" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 GO:GO:0046827 GO:GO:0043588
GO:GO:0032092 GO:GO:0008283 GO:GO:0043565 GO:GO:0045944
GO:GO:0032024 GO:GO:0003700 GO:GO:0007050 GO:GO:0003682
GO:GO:0042593 GO:GO:0005667 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0043065 GO:GO:0048641 GO:GO:0051897 GO:GO:0045599
GO:GO:0042475 GO:GO:0043433 GO:GO:0090090 GO:GO:0035019
GO:GO:0001568 GO:GO:0045444 GO:GO:0021915 GO:GO:0021983
GO:GO:0030282 GO:GO:0048660 GO:GO:0035411 GO:GO:0060325
GO:GO:0046621 GO:GO:0014003 GO:GO:0043570 GO:GO:0050679
GO:GO:0032993 GO:GO:0030514 GO:GO:0048619 GO:GO:0061178
GO:GO:0031641 GO:GO:0040037 GO:GO:0070369 GO:GO:0044334
GO:GO:0010909 GO:GO:0048713 GO:GO:0048625 GO:GO:0048557
GO:GO:0030538 GO:GO:0032350 GO:GO:0032252 InterPro:IPR013558
PANTHER:PTHR10373 Pfam:PF08347 GeneTree:ENSGT00390000009964
OMA:EPWCLES EMBL:CT737264 EMBL:CT737332 EMBL:CT826377
Ensembl:ENSSSCT00000011635 Uniprot:F1S5J6
Length = 468
Score = 101 (40.6 bits), Expect = 0.00044, P = 0.00044
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 198 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 256
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 257 HMQLYPGWSARDNYGKKKKRKRDKQ 281
>UNIPROTKB|Q9Y0B2 [details] [associations]
symbol:Q9Y0B2 "HMG protein Tcf/Lef" species:7668
"Strongylocentrotus purpuratus" [GO:0005667 "transcription factor
complex" evidence=IBA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IBA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IBA]
[GO:0008013 "beta-catenin binding" evidence=IBA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IBA] [GO:0043565
"sequence-specific DNA binding" evidence=IBA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IBA]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IBA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0043565 GO:GO:0006357 GO:GO:0005667 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0008013 GO:GO:0060070 InterPro:IPR013558 PANTHER:PTHR10373
Pfam:PF08347 eggNOG:NOG252916 KO:K04491 CTD:373203 EMBL:AF161594
RefSeq:NP_999640.1 UniGene:Spu.19422 HSSP:P27782
ProteinModelPortal:Q9Y0B2 SMR:Q9Y0B2 STRING:Q9Y0B2 PRIDE:Q9Y0B2
GeneID:373203 KEGG:spu:373203 InParanoid:Q9Y0B2 Uniprot:Q9Y0B2
Length = 478
Score = 101 (40.6 bits), Expect = 0.00045, P = 0.00045
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
KKP AF ++++ R ++ +K AI + G +W +T EE+ KYY++A ++R
Sbjct: 317 KKPLNAFMLYMKEMRASVVKECT-LKESAAINQILGRRWHALTREEQAKYYELARKER 373
>UNIPROTKB|J9P2V1 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 EMBL:AAEX03015533 EMBL:AAEX03015534
EMBL:AAEX03015535 Ensembl:ENSCAFT00000046482 Uniprot:J9P2V1
Length = 487
Score = 101 (40.6 bits), Expect = 0.00046, P = 0.00046
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 198 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 256
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 257 HMQLYPGWSARDNYGKKKKRKRDKQ 281
>UNIPROTKB|E2QXK1 [details] [associations]
symbol:TCF7L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 OMA:EPWCLES EMBL:AAEX03015533
EMBL:AAEX03015534 EMBL:AAEX03015535 Ensembl:ENSCAFT00000017510
Uniprot:E2QXK1
Length = 507
Score = 101 (40.6 bits), Expect = 0.00049, P = 0.00049
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 236 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 294
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 295 HMQLYPGWSARDNYGKKKKRKRDKQ 319
>UNIPROTKB|F1NYW9 [details] [associations]
symbol:TCF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0021915 "neural tube development" evidence=IEA] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IEA] [GO:0033153 "T
cell receptor V(D)J recombination" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0046632 "alpha-beta T cell differentiation" evidence=IEA]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IEA]
[GO:0048619 "embryonic hindgut morphogenesis" evidence=IEA]
[GO:0071353 "cellular response to interleukin-4" evidence=IEA]
InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505 GO:GO:0005634
GO:GO:0042981 GO:GO:0016055 GO:GO:0003700 GO:GO:0042127
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0071353 InterPro:IPR013558 PANTHER:PTHR10373
Pfam:PF08347 GeneTree:ENSGT00390000009964 EMBL:AADN02028324
EMBL:AADN02028325 EMBL:AADN02028326 EMBL:AADN02028327
EMBL:AADN02028328 IPI:IPI00581442 Ensembl:ENSGALT00000010476
OMA:RFPHPLM Uniprot:F1NYW9
Length = 386
Score = 100 (40.3 bits), Expect = 0.00056, P = 0.00056
Identities = 24/88 (27%), Positives = 43/88 (48%)
Query: 68 KKPPTAFFYFLEDFR-KGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
KKP AF ++++ R K E +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 254 KKPLNAFMLYMKEMRAKVIAECT--LKESAAINQILGRRWHALSREEQAKYYELARKERQ 311
Query: 127 EFDRAMADYIKRKENGKVENSEEDSEFD 154
+ + R GK + + + D
Sbjct: 312 LHMQLYPGWSARDNYGKKKRRSREKQQD 339
>UNIPROTKB|D4A8X6 [details] [associations]
symbol:683733 "Protein 683733" species:10116 "Rattus
norvegicus" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
IPI:IPI00196253 Ensembl:ENSRNOT00000019681 ArrayExpress:D4A8X6
Uniprot:D4A8X6
Length = 598
Score = 101 (40.6 bits), Expect = 0.00061, P = 0.00061
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 328 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 386
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 387 HMQLYPGWSARDNYGKKKKRKRDKQ 411
>UNIPROTKB|Q9NQB0 [details] [associations]
symbol:TCF7L2 "Transcription factor 7-like 2" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0030282
"bone mineralization" evidence=IEA] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=IEA] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IEA] [GO:0031641
"regulation of myelination" evidence=IEA] [GO:0032252 "secretory
granule localization" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0035411 "catenin import into
nucleus" evidence=IEA] [GO:0040037 "negative regulation of
fibroblast growth factor receptor signaling pathway" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0045599 "negative regulation of fat cell differentiation"
evidence=IEA] [GO:0046621 "negative regulation of organ growth"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048619 "embryonic hindgut morphogenesis"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0048713 "regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0050679
"positive regulation of epithelial cell proliferation"
evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
[GO:0061178 "regulation of insulin secretion involved in cellular
response to glucose stimulus" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0003682 "chromatin binding" evidence=IBA] [GO:0005667
"transcription factor complex" evidence=IBA] [GO:0007420 "brain
development" evidence=IBA] [GO:0022008 "neurogenesis" evidence=IBA]
[GO:0048699 "generation of neurons" evidence=IBA] [GO:0005515
"protein binding" evidence=IPI] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA;IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IDA;IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0031016 "pancreas development" evidence=TAS] [GO:0007050 "cell
cycle arrest" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0045444 "fat cell differentiation" evidence=IDA]
[GO:0048625 "myoblast cell fate commitment" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0008013 "beta-catenin
binding" evidence=IDA;IPI] [GO:0032350 "regulation of hormone
metabolic process" evidence=IDA] [GO:0042593 "glucose homeostasis"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IC] [GO:0032024 "positive regulation of
insulin secretion" evidence=IMP;IDA] [GO:0001568 "blood vessel
development" evidence=IMP] [GO:0032993 "protein-DNA complex"
evidence=IDA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0035257 "nuclear hormone receptor
binding" evidence=IPI] [GO:0032092 "positive regulation of protein
binding" evidence=IDA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0044334
"canonical Wnt receptor signaling pathway involved in positive
regulation of epithelial to mesenchymal transition" evidence=IMP]
[GO:0043570 "maintenance of DNA repeat elements" evidence=IMP]
[GO:0048660 "regulation of smooth muscle cell proliferation"
evidence=IMP] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0070369 "beta-catenin-TCF7L2 complex"
evidence=IDA] [GO:0045295 "gamma-catenin binding" evidence=IPI]
[GO:0010909 "positive regulation of heparan sulfate proteoglycan
biosynthetic process" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0009749 "response to glucose stimulus"
evidence=ISS] [GO:0051897 "positive regulation of protein kinase B
signaling cascade" evidence=IMP] [GO:0046827 "positive regulation
of protein export from nucleus" evidence=IMP] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IDA] InterPro:IPR009071 InterPro:IPR024940
Pfam:PF00505 GO:GO:0043066 GO:GO:0046827 GO:GO:0043588
GO:GO:0007420 GO:GO:0032092 GO:GO:0016605 GO:GO:0008283
GO:GO:0009749 GO:GO:0045944 GO:GO:0032024 GO:GO:0003700
GO:GO:0007050 GO:GO:0006351 GO:GO:0003682 GO:GO:0042593
GO:GO:0005667 GO:GO:0000978 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0043065
GO:GO:0000790 GO:GO:0048641 GO:GO:0051897 GO:GO:0045599 MIM:125853
GO:GO:0042475 GO:GO:0043433 GO:GO:0090090 GO:GO:0035019
GO:GO:0001568 GO:GO:0045444 GO:GO:0021915 GO:GO:0031016
GO:GO:0021983 GO:GO:0030282 GO:GO:0008013 GO:GO:0048660
GO:GO:0035411 GO:GO:0060325 GO:GO:0046621 GO:GO:0014003
GO:GO:0043570 GO:GO:0050679 PDB:2GL7 PDBsum:2GL7 GO:GO:0032993
GO:GO:0030514 GO:GO:0048619 GO:GO:0061178 GO:GO:0031641
GO:GO:0048699 GO:GO:0040037 GO:GO:0070369 GO:GO:0044334
GO:GO:0010909 PDB:1JDH PDB:1JPW PDBsum:1JDH PDBsum:1JPW
GO:GO:0048713 GO:GO:0048625 GO:GO:0048557 GO:GO:0030538
GO:GO:0032350 GO:GO:0032252 CleanEx:HS_TCF4 HOVERGEN:HBG000419
InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347 eggNOG:NOG252916
EMBL:Y11306 EMBL:AJ270770 EMBL:AJ270771 EMBL:AJ270772 EMBL:AJ270773
EMBL:AJ270774 EMBL:AJ270775 EMBL:AJ270776 EMBL:AJ270778
EMBL:AJ270777 EMBL:AL135792 EMBL:AL158212 EMBL:AL445486
EMBL:AL451084 EMBL:BC032656 EMBL:AB034691 IPI:IPI00164708
IPI:IPI00221004 IPI:IPI00221005 IPI:IPI00221006 IPI:IPI00221007
IPI:IPI00221008 IPI:IPI00221009 IPI:IPI00221010 IPI:IPI00221011
IPI:IPI00335587 IPI:IPI00479483 IPI:IPI00983769 PIR:S22807
RefSeq:NP_001139746.1 RefSeq:NP_001139756.1 UniGene:Hs.593995
DisProt:DP00175 ProteinModelPortal:Q9NQB0 SMR:Q9NQB0 DIP:DIP-36236N
IntAct:Q9NQB0 MINT:MINT-222146 STRING:Q9NQB0 PhosphoSite:Q9NQB0
DMDM:29337146 PaxDb:Q9NQB0 PRIDE:Q9NQB0 Ensembl:ENST00000352065
Ensembl:ENST00000355717 Ensembl:ENST00000355995
Ensembl:ENST00000369397 Ensembl:ENST00000534894
Ensembl:ENST00000536810 Ensembl:ENST00000538897
Ensembl:ENST00000543371 Ensembl:ENST00000545257 GeneID:6934
KEGG:hsa:6934 UCSC:uc001lad.4 UCSC:uc001lae.4 UCSC:uc021pyi.1
UCSC:uc021pyj.1 CTD:6934 GeneCards:GC10P114700 HGNC:HGNC:11641
HPA:CAB013535 MIM:602228 neXtProt:NX_Q9NQB0 PharmGKB:PA36394
KO:K04491 OMA:EPWCLES OrthoDB:EOG43XV3J ChEMBL:CHEMBL1914264
ChiTaRS:TCF7L2 EvolutionaryTrace:Q9NQB0 GenomeRNAi:6934
NextBio:27133 ArrayExpress:Q9NQB0 Bgee:Q9NQB0 Genevestigator:Q9NQB0
GermOnline:ENSG00000148737 Uniprot:Q9NQB0
Length = 619
Score = 101 (40.6 bits), Expect = 0.00063, P = 0.00063
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP AF ++++ R + +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 351 KKPLNAFMLYMKEMRAKVVAECT-LKESAAINQILGRRWHALSREEQAKYYELARKERQL 409
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+ + R GK + + D +
Sbjct: 410 HMQLYPGWSARDNYGKKKKRKRDKQ 434
>WB|WBGene00004077 [details] [associations]
symbol:pop-1 species:6239 "Caenorhabditis elegans"
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0010085
"polarity specification of proximal/distal axis" evidence=IGI]
[GO:0042659 "regulation of cell fate specification" evidence=IGI]
[GO:0009786 "regulation of asymmetric cell division" evidence=IGI]
[GO:0007500 "mesodermal cell fate determination" evidence=IGI;IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043282 "pharyngeal muscle development"
evidence=IGI;IMP] [GO:0009880 "embryonic pattern specification"
evidence=IGI;IMP] [GO:0040026 "positive regulation of vulval
development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=IPI] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0035035 "histone acetyltransferase binding"
evidence=IPI] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IDA] InterPro:IPR009071
InterPro:IPR024940 Pfam:PF00505 GO:GO:0009792 GO:GO:0002009
GO:GO:0005737 GO:GO:0006915 GO:GO:0045892 GO:GO:0007052
GO:GO:0016246 GO:GO:0045944 GO:GO:0003700 GO:GO:0005667
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0040035 GO:GO:0009786 GO:GO:0009880 GO:GO:0008356
GO:GO:0060070 GO:GO:0040027 GO:GO:0000977 GO:GO:0040026
GO:GO:0042659 GO:GO:0007500 GO:GO:0001703 GO:GO:0043282
PANTHER:PTHR10373 GO:GO:0010085 eggNOG:NOG252916
GeneTree:ENSGT00390000009964 HOGENOM:HOG000184838 EMBL:U37532
EMBL:FO081765 PIR:A57667 PIR:C87732 PIR:T32931 RefSeq:NP_491053.4
UniGene:Cel.19670 PDB:3C2G PDBsum:3C2G ProteinModelPortal:Q10666
SMR:Q10666 DIP:DIP-25683N IntAct:Q10666 MINT:MINT-214603
STRING:Q10666 PaxDb:Q10666 EnsemblMetazoa:W10C8.2 GeneID:171849
KEGG:cel:CELE_W10C8.2 UCSC:W10C8.2 CTD:171849 WormBase:W10C8.2
InParanoid:Q10666 OMA:QQLADDK EvolutionaryTrace:Q10666
NextBio:872963 Uniprot:Q10666
Length = 438
Score = 100 (40.3 bits), Expect = 0.00068, P = 0.00068
Identities = 23/89 (25%), Positives = 44/89 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQ-NPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
KKP AF +F+++ RK E+ + K + K G++W ++ EE+ KY+++A + +
Sbjct: 193 KKPLNAFMWFMKENRKALLEEIGNNEKQSAELNKELGKRWHDLSKEEQAKYFEMAKKDKE 252
Query: 127 EFDRAMADYIKRKENGKVENSEEDSEFDE 155
++ R EN V + D+
Sbjct: 253 THKERYPEWSAR-ENYAVNKKKTKKRRDK 280
>UNIPROTKB|Q10666 [details] [associations]
symbol:pop-1 "Protein pop-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] [GO:0008356
"asymmetric cell division" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IBA;TAS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IBA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IBA] [GO:0005667 "transcription factor complex"
evidence=IBA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0009792 GO:GO:0002009 GO:GO:0005737 GO:GO:0006915
GO:GO:0045892 GO:GO:0007052 GO:GO:0016246 GO:GO:0045944
GO:GO:0003700 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0040035 GO:GO:0009786
GO:GO:0009880 GO:GO:0008356 GO:GO:0060070 GO:GO:0040027
GO:GO:0000977 GO:GO:0040026 GO:GO:0042659 GO:GO:0007500
GO:GO:0001703 GO:GO:0043282 PANTHER:PTHR10373 GO:GO:0010085
eggNOG:NOG252916 GeneTree:ENSGT00390000009964 HOGENOM:HOG000184838
EMBL:U37532 EMBL:FO081765 PIR:A57667 PIR:C87732 PIR:T32931
RefSeq:NP_491053.4 UniGene:Cel.19670 PDB:3C2G PDBsum:3C2G
ProteinModelPortal:Q10666 SMR:Q10666 DIP:DIP-25683N IntAct:Q10666
MINT:MINT-214603 STRING:Q10666 PaxDb:Q10666 EnsemblMetazoa:W10C8.2
GeneID:171849 KEGG:cel:CELE_W10C8.2 UCSC:W10C8.2 CTD:171849
WormBase:W10C8.2 InParanoid:Q10666 OMA:QQLADDK
EvolutionaryTrace:Q10666 NextBio:872963 Uniprot:Q10666
Length = 438
Score = 100 (40.3 bits), Expect = 0.00068, P = 0.00068
Identities = 23/89 (25%), Positives = 44/89 (49%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQ-NPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
KKP AF +F+++ RK E+ + K + K G++W ++ EE+ KY+++A + +
Sbjct: 193 KKPLNAFMWFMKENRKALLEEIGNNEKQSAELNKELGKRWHDLSKEEQAKYFEMAKKDKE 252
Query: 127 EFDRAMADYIKRKENGKVENSEEDSEFDE 155
++ R EN V + D+
Sbjct: 253 THKERYPEWSAR-ENYAVNKKKTKKRRDK 280
>UNIPROTKB|P25980 [details] [associations]
symbol:ubtf-b "Nucleolar transcription factor 1-B"
species:8355 "Xenopus laevis" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005730 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 GO:GO:0045943 KO:K09273 HOVERGEN:HBG008708 EMBL:X57561
EMBL:X59863 PIR:S17196 PIR:S78454 RefSeq:NP_001079429.1
UniGene:Xl.31219 ProteinModelPortal:P25980 SMR:P25980 GeneID:379116
KEGG:xla:379116 CTD:379116 Xenbase:XB-GENE-966569 Uniprot:P25980
Length = 701
Score = 101 (40.6 bits), Expect = 0.00074, P = 0.00074
Identities = 26/90 (28%), Positives = 52/90 (57%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYY-DIATEKR 125
PKKP T +F F + R + + +P++ ++ + K +K+K + ++K+KY D EK+
Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLD-LTKILSKKYKELPEKKKMKYIQDFQREKQ 170
Query: 126 AEFDRAMADYIKRKENGKVENSEEDSEFDE 155
+F+R MA + R+E+ + + + S+ E
Sbjct: 171 -DFERNMAKF--REEHPDLMQNPKKSDVPE 197
>UNIPROTKB|F1STP6 [details] [associations]
symbol:LOC100623257 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0010468 "regulation of gene expression"
evidence=IEA] [GO:0007566 "embryo implantation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001832 "blastocyst growth" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00530000063934
OMA:LTAYIRF EMBL:FP565680 Ensembl:ENSSSCT00000016286 Uniprot:F1STP6
Length = 383
Score = 99 (39.9 bits), Expect = 0.00089, P = 0.00089
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY-YDIATEKR 125
PKKP T++ F + R + +++P + S + + K E++K + + K+KY D EK+
Sbjct: 100 PKKPLTSYIRFFTEMRPQYLQKHPQL-SNQELTKVLSEEYKKLPEQMKLKYTQDFQKEKQ 158
Query: 126 AEFDRAMADYIKRKENGKVENSEEDS 151
EF+ MA + K + V S + +
Sbjct: 159 -EFEEKMAQF-KEQHPDLVRKSRKSA 182
>UNIPROTKB|Q9BT81 [details] [associations]
symbol:SOX7 "Transcription factor SOX-7" species:9606 "Homo
sapiens" [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0060828 "regulation of canonical
Wnt receptor signaling pathway" evidence=IDA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0001706 "endoderm formation" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0008285
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0043280
GO:GO:0060828 GO:GO:0001706 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 KO:K09270 HOGENOM:HOG000069999 HOVERGEN:HBG000517
EMBL:AJ409320 EMBL:AK055556 EMBL:BT006693 EMBL:BC071947
IPI:IPI00027779 RefSeq:NP_113627.1 UniGene:Hs.709543
ProteinModelPortal:Q9BT81 SMR:Q9BT81 MINT:MINT-1186658
STRING:Q9BT81 PhosphoSite:Q9BT81 DMDM:20532272 PRIDE:Q9BT81
DNASU:83595 Ensembl:ENST00000304501 GeneID:83595 KEGG:hsa:83595
UCSC:uc003wtf.3 CTD:83595 GeneCards:GC08M010618 HGNC:HGNC:18196
HPA:HPA009065 MIM:612202 neXtProt:NX_Q9BT81 PharmGKB:PA38307
InParanoid:Q9BT81 OrthoDB:EOG447FTC PhylomeDB:Q9BT81 ChiTaRS:SOX7
GenomeRNAi:83595 NextBio:72529 ArrayExpress:Q9BT81 Bgee:Q9BT81
CleanEx:HS_SOX7 Genevestigator:Q9BT81 GermOnline:ENSG00000171056
Uniprot:Q9BT81
Length = 388
Score = 99 (39.9 bits), Expect = 0.00090, P = 0.00090
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
++P AF + +D RK QNPD+ + + K G+ WK +T +K Y D A R +
Sbjct: 46 RRPMNAFMVWAKDERKRLAVQNPDLHNAE-LSKMLGKSWKALTLSQKRPYVDEAERLRLQ 104
Query: 128 FDRAMADY 135
M DY
Sbjct: 105 H---MQDY 109
>UNIPROTKB|I3LU29 [details] [associations]
symbol:SOX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060828 "regulation of canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001706 "endoderm formation"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0043565 GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0043280
GO:GO:0060828 GO:GO:0001706 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270 CTD:83595
OMA:ECPALEA EMBL:CT737360 RefSeq:XP_003359100.1
Ensembl:ENSSSCT00000023754 GeneID:100155811 KEGG:ssc:100155811
Uniprot:I3LU29
Length = 389
Score = 99 (39.9 bits), Expect = 0.00091, P = 0.00091
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
++P AF + +D RK QNPD+ + + K G+ WK +T +K Y D A R +
Sbjct: 46 RRPMNAFMVWAKDERKRLAVQNPDLHNAE-LSKMLGKSWKALTLSQKRPYVDEAERLRLQ 104
Query: 128 FDRAMADY 135
M DY
Sbjct: 105 H---MQDY 109
>UNIPROTKB|I3LUM5 [details] [associations]
symbol:TCF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071353 "cellular response to interleukin-4"
evidence=IEA] [GO:0048619 "embryonic hindgut morphogenesis"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0046632 "alpha-beta T cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0033153 "T cell receptor V(D)J
recombination" evidence=IEA] [GO:0030538 "embryonic genitalia
morphogenesis" evidence=IEA] [GO:0021915 "neural tube development"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0005634 GO:GO:0042981 GO:GO:0016055 GO:GO:0003700
GO:GO:0042127 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0021915 GO:GO:0046632
GO:GO:0033153 GO:GO:0048619 GO:GO:0071353 GO:GO:0048557
GO:GO:0030538 InterPro:IPR013558 PANTHER:PTHR10373 Pfam:PF08347
GeneTree:ENSGT00390000009964 OMA:HISADIN EMBL:CU694278
Ensembl:ENSSSCT00000023234 Uniprot:I3LUM5
Length = 280
Score = 98 (39.6 bits), Expect = 0.00094, P = 0.00094
Identities = 24/88 (27%), Positives = 42/88 (47%)
Query: 68 KKPPTAFFYFLEDFR-KGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
KKP AF ++++ R K E +K AI + G +W ++ EE+ KYY++A ++R
Sbjct: 166 KKPLNAFMLYMKEMRAKVIAECT--LKESAAINQILGRRWHALSREEQAKYYELARKERQ 223
Query: 127 EFDRAMADYIKRKENGKVENSEEDSEFD 154
+ + R GK + + D
Sbjct: 224 LHMQLYPGWSARDNYGKKKRRSREKHQD 251
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.126 0.347 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 157 140 0.00091 102 3 11 23 0.37 32
30 0.46 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 167
No. of states in DFA: 567 (60 KB)
Total size of DFA: 133 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.07u 0.08s 14.15t Elapsed: 00:00:02
Total cpu time: 14.09u 0.08s 14.17t Elapsed: 00:00:02
Start: Sat May 11 07:35:41 2013 End: Sat May 11 07:35:43 2013
WARNINGS ISSUED: 1