BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031573
(157 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225463454|ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera]
gi|297740668|emb|CBI30850.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/139 (67%), Positives = 109/139 (78%), Gaps = 4/139 (2%)
Query: 17 ASNLKMVLRKRPT---RHSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTA 73
S +MVLR R T + +V+ + EKE K S + K KK+ +++DSK PKKPPTA
Sbjct: 35 TSTERMVLRVRSTEKIKRAVMESRVSEKEKKPRSGNKAKAKTKKRSQRVDSKKPKKPPTA 94
Query: 74 FFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMA 133
FFYFLEDFRK FQEQNPD+KSMR IGKACGEKWKTMTYEEKV+YYDIATEKRAEFDRAMA
Sbjct: 95 FFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMA 154
Query: 134 DYIKRKENGKVENSEEDSE 152
DYIKR+E+G+ E EDSE
Sbjct: 155 DYIKRQESGEDEEI-EDSE 172
>gi|255557355|ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 198
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/95 (84%), Positives = 88/95 (92%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
KLDSK PKKPPTAFFYFLEDFRK FQ+QNPD+KSMR IGKACGEKWK MTYEEKVKYYDI
Sbjct: 104 KLDSKKPKKPPTAFFYFLEDFRKDFQKQNPDVKSMREIGKACGEKWKMMTYEEKVKYYDI 163
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
ATEKRAEFD+AMA+YIK+KE+G+ E E+DSEFDE
Sbjct: 164 ATEKRAEFDKAMAEYIKKKESGEFEEVEDDSEFDE 198
>gi|356524949|ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
Length = 148
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/94 (74%), Positives = 83/94 (88%)
Query: 62 LDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D+ PKKPPTAFFYFLEDFRK FQEQNPD+KSMR IGKACGEKWKTMTYEEKV+YYDIA
Sbjct: 55 FDAMKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIA 114
Query: 122 TEKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
T+KR EFD AMA++ K+ ENG+ + ++++SEFDE
Sbjct: 115 TKKREEFDNAMAEFNKKMENGEFDETDDESEFDE 148
>gi|449433698|ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
gi|449505924|ref|XP_004162605.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
Length = 161
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 81/96 (84%)
Query: 59 HEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYY 118
++K D PKKPPTAFFYFL+DFRK FQEQNPD+K+MR +GKACGEKWKTMTYEEKV+YY
Sbjct: 65 NDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTMTYEEKVQYY 124
Query: 119 DIATEKRAEFDRAMADYIKRKENGKVENSEEDSEFD 154
DIATEKRAEFD+AM +Y KR E+G + SEED D
Sbjct: 125 DIATEKRAEFDKAMTEYKKRMESGIDQESEEDWAID 160
>gi|351724833|ref|NP_001237839.1| uncharacterized protein LOC100305607 [Glycine max]
gi|255626057|gb|ACU13373.1| unknown [Glycine max]
Length = 150
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 68/94 (72%), Positives = 83/94 (88%)
Query: 62 LDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D+ P+KPPTAFFYFLEDFRK FQEQNPD++SMR IGKACGEKWKTMTYEEKV+YYDIA
Sbjct: 57 FDAMKPRKPPTAFFYFLEDFRKEFQEQNPDVRSMRDIGKACGEKWKTMTYEEKVQYYDIA 116
Query: 122 TEKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
T+KR EFD AMA++ K+ ENG+ + ++++SEFDE
Sbjct: 117 TKKREEFDSAMAEFNKKMENGEFDETDDESEFDE 150
>gi|224080027|ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
gi|222848960|gb|EEE86507.1| high mobility group family [Populus trichocarpa]
Length = 165
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/84 (83%), Positives = 78/84 (92%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRA 131
TAFFYFLEDFRK FQEQNPD+KSMR +GKACGEKWKTMTYEEKVKYYDIATEKRAEFDRA
Sbjct: 82 TAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRA 141
Query: 132 MADYIKRKENGKVENSEEDSEFDE 155
++YIKRKE+G+ E+ E+ SEFDE
Sbjct: 142 TSEYIKRKESGEDEDPEDASEFDE 165
>gi|297826905|ref|XP_002881335.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327174|gb|EFH57594.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/93 (75%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
Query: 62 LDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMR-AIGKACGEKWKTMTYEEKVKYYDI 120
L SKMPKKPPTAFF+FLEDFRK +QE+NP++KSMR IGK CGEKWKTMTYEEKVKYYDI
Sbjct: 59 LHSKMPKKPPTAFFFFLEDFRKQYQEENPEVKSMREVIGKTCGEKWKTMTYEEKVKYYDI 118
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENSEEDSEF 153
ATEKR EF RAM +Y KR E+G + SE DSE+
Sbjct: 119 ATEKREEFHRAMTEYTKRMESGGYDESETDSEY 151
>gi|18403553|ref|NP_565788.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
gi|75219838|sp|O64702.2|HMG14_ARATH RecName: Full=High mobility group B protein 14; AltName:
Full=Nucleosome/chromatin assembly factor group D 14
gi|20197083|gb|AAC26692.2| putative HMG protein [Arabidopsis thaliana]
gi|20197160|gb|AAM14948.1| putative HMG protein [Arabidopsis thaliana]
gi|21536857|gb|AAM61189.1| putative HMG protein [Arabidopsis thaliana]
gi|26452914|dbj|BAC43535.1| putative HMG protein [Arabidopsis thaliana]
gi|28973511|gb|AAO64080.1| putative HMG protein [Arabidopsis thaliana]
gi|330253881|gb|AEC08975.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
Length = 151
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/94 (72%), Positives = 79/94 (84%)
Query: 62 LDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIA 121
L +KMPKKP TAFF+FL+DFRK +QE+NPD+KSMR IGK CGEKWKTMTYEEKVKYYDIA
Sbjct: 58 LQTKMPKKPATAFFFFLDDFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIA 117
Query: 122 TEKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
TEKR EF RAM +Y KR E+G + SE DS++ E
Sbjct: 118 TEKREEFHRAMTEYTKRMESGAHDESETDSDYSE 151
>gi|388501678|gb|AFK38905.1| unknown [Medicago truncatula]
Length = 152
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Query: 38 GIEKEGKSISAKRVTTKLKKKH-EKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMR 96
G+++ + ++ +T ++KK+ +K+D+K PKKPPTAFFYFLEDFRK F++QNPD+KSMR
Sbjct: 34 GMKRSLRQTKSRDITKAVQKKNKQKIDAKKPKKPPTAFFYFLEDFRKEFKDQNPDVKSMR 93
Query: 97 AIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENG 142
IGKACGEKWKTMT+EEKV+YYDIATEKRAEFDRA +Y K+ E+G
Sbjct: 94 DIGKACGEKWKTMTFEEKVQYYDIATEKRAEFDRATTEYNKKMESG 139
>gi|388495062|gb|AFK35597.1| unknown [Lotus japonicus]
Length = 162
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 92/123 (74%), Gaps = 6/123 (4%)
Query: 16 SASNLKMVLRKRPTRHSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFF 75
SAS+ K+VLR + + +A ++ S K+ K K +++D+ PKKPPTAFF
Sbjct: 25 SASSRKLVLRVKSSEQMKRSA------QQTKSTKKPKAKQKTSKQRIDANKPKKPPTAFF 78
Query: 76 YFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
YFLEDFRK FQ QNPD+K+MR IGK+CGEKWKTMTYEEKV+YYDIATEKRAEFDRAM +Y
Sbjct: 79 YFLEDFRKEFQVQNPDVKTMRDIGKSCGEKWKTMTYEEKVQYYDIATEKRAEFDRAMTEY 138
Query: 136 IKR 138
K+
Sbjct: 139 NKK 141
>gi|79324303|ref|NP_001031480.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
gi|330253882|gb|AEC08976.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
Length = 152
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 79/95 (83%), Gaps = 1/95 (1%)
Query: 62 LDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMR-AIGKACGEKWKTMTYEEKVKYYDI 120
L +KMPKKP TAFF+FL+DFRK +QE+NPD+KSMR IGK CGEKWKTMTYEEKVKYYDI
Sbjct: 58 LQTKMPKKPATAFFFFLDDFRKQYQEENPDVKSMREVIGKTCGEKWKTMTYEEKVKYYDI 117
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
ATEKR EF RAM +Y KR E+G + SE DS++ E
Sbjct: 118 ATEKREEFHRAMTEYTKRMESGAHDESETDSDYSE 152
>gi|297597325|ref|NP_001043799.2| Os01g0666200 [Oryza sativa Japonica Group]
gi|56202161|dbj|BAD73639.1| HMG protein-like [Oryza sativa Japonica Group]
gi|125527174|gb|EAY75288.1| hypothetical protein OsI_03176 [Oryza sativa Indica Group]
gi|215693961|dbj|BAG89148.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673529|dbj|BAF05713.2| Os01g0666200 [Oryza sativa Japonica Group]
Length = 133
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 84/99 (84%), Gaps = 3/99 (3%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
KK +D + PKKPPTAFFYF+EDFRK ++E+NP +KSM+ +GKACGEKW TMT+EE+V
Sbjct: 38 KKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERV 97
Query: 116 KYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSEFD 154
KYYDIATEKRAE+++A+A++ K+KE+G++ E+S++D
Sbjct: 98 KYYDIATEKRAEYEKAVAEFDKKKESGEL---SEESDYD 133
>gi|125527178|gb|EAY75292.1| hypothetical protein OsI_03182 [Oryza sativa Indica Group]
Length = 133
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/99 (59%), Positives = 83/99 (83%), Gaps = 3/99 (3%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
KK +D + PKKPPTAFFYF+EDFRK ++E+NP +KSM+ +GKACGEKW TMT+EE+V
Sbjct: 38 KKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERV 97
Query: 116 KYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSEFD 154
KYYDIATEKRAE+++ +A++ K+KE+G++ E+S++D
Sbjct: 98 KYYDIATEKRAEYEKPVAEFDKKKESGEL---SEESDYD 133
>gi|242053921|ref|XP_002456106.1| hypothetical protein SORBIDRAFT_03g030540 [Sorghum bicolor]
gi|241928081|gb|EES01226.1| hypothetical protein SORBIDRAFT_03g030540 [Sorghum bicolor]
Length = 109
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 79/94 (84%), Gaps = 3/94 (3%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D + PKKPPTAFFYF+EDFRK ++++ P +KSM+ IGKACGEKW TM +EEKVKYYDI
Sbjct: 19 KGDRRAPKKPPTAFFYFMEDFRKVYKQEKPSVKSMQEIGKACGEKWNTMAFEEKVKYYDI 78
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENSEEDSEFD 154
ATEKRAEF++AM +Y K+K+NG++ E+S++D
Sbjct: 79 ATEKRAEFEKAMIEYNKKKKNGEM---SEESDYD 109
>gi|226503761|ref|NP_001151622.1| HMG1/2-like protein [Zea mays]
gi|195648164|gb|ACG43550.1| HMG1/2-like protein [Zea mays]
gi|414881086|tpg|DAA58217.1| TPA: HMG1/2-like protein [Zea mays]
Length = 115
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 71/81 (87%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D + PKKPPTAFFYF+EDFRK ++++ P +KSM+ IGKACGEKW TMT+EEKVKYYDI
Sbjct: 35 KGDPRAPKKPPTAFFYFMEDFRKIYKQEKPSVKSMQEIGKACGEKWNTMTFEEKVKYYDI 94
Query: 121 ATEKRAEFDRAMADYIKRKEN 141
ATEKRAEF++AM +Y K+KE+
Sbjct: 95 ATEKRAEFEKAMIEYNKKKES 115
>gi|356528116|ref|XP_003532651.1| PREDICTED: high mobility group protein B2-like [Glycine max]
Length = 234
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 65/80 (81%), Gaps = 4/80 (5%)
Query: 60 EKLDSKMPKKPPTAFF----YFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
+ D+ PKK P+AFF F+EDFRK FQEQNPDIKSM IGKACGEKWKTMTYEEKV
Sbjct: 38 QMFDAMKPKKSPSAFFPLFSLFMEDFRKEFQEQNPDIKSMYDIGKACGEKWKTMTYEEKV 97
Query: 116 KYYDIATEKRAEFDRAMADY 135
KYYDIA+EKR EFDRAMA +
Sbjct: 98 KYYDIASEKRIEFDRAMAKF 117
>gi|357135842|ref|XP_003569517.1| PREDICTED: high mobility group B protein 14-like [Brachypodium
distachyon]
Length = 127
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 72/89 (80%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
+KK D + PKKPPTAFFYF+EDFR F+ +NP +KSM+ IG+ACGEKW M +EEKV
Sbjct: 32 RKKGTVGDPRRPKKPPTAFFYFMEDFRDKFKAENPSVKSMQDIGRACGEKWNKMAFEEKV 91
Query: 116 KYYDIATEKRAEFDRAMADYIKRKENGKV 144
KYYD+ATE+RAEF++AMA Y K+K +G++
Sbjct: 92 KYYDLATERRAEFEKAMAQYNKKKISGEL 120
>gi|356510782|ref|XP_003524113.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
Length = 165
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 93/145 (64%), Gaps = 21/145 (14%)
Query: 21 KMVLRKRPTRHSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLED 80
K+VLR + GI++ + ++++ KLK K +K D+ KKP + FFYFLED
Sbjct: 32 KLVLRLKSND-------GIKRSVQQTNSRK---KLKAK-QKFDAMKQKKPLSGFFYFLED 80
Query: 81 FRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKR-- 138
FRK FQ +NPD+KS R IGKA +KWKTMTYEEK +Y+DIAT+K EFD AMA++ K+
Sbjct: 81 FRKEFQVRNPDVKSKRDIGKASAKKWKTMTYEEKAQYFDIATKKHDEFDSAMAEFNKKMI 140
Query: 139 --------KENGKVENSEEDSEFDE 155
E V+ ++E+SEFDE
Sbjct: 141 SNLSFLLASELTLVDETDEESEFDE 165
>gi|222619008|gb|EEE55140.1| hypothetical protein OsJ_02931 [Oryza sativa Japonica Group]
Length = 157
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 67/76 (88%), Gaps = 3/76 (3%)
Query: 79 EDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKR 138
EDFRK ++E+NP +KSM+ +GKACGEKW TMT+EE+VKYYDIATEKRAE+++A+A++ K+
Sbjct: 85 EDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIATEKRAEYEKAVAEFDKK 144
Query: 139 KENGKVENSEEDSEFD 154
KE+G++ E+S++D
Sbjct: 145 KESGEL---SEESDYD 157
>gi|116781378|gb|ABK22074.1| unknown [Picea sitchensis]
gi|224284710|gb|ACN40086.1| unknown [Picea sitchensis]
Length = 154
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 63/90 (70%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PPTAFF +LE+FRK F++++PD+K + A+GKACG+KWK M+ EK Y A
Sbjct: 44 DPNQPKRPPTAFFVYLEEFRKTFKQKHPDVKGVTAVGKACGDKWKEMSEAEKAPYLAKAA 103
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSE 152
+KRAE+D M Y K++E G + E+SE
Sbjct: 104 QKRAEYDVTMTAYKKKQEVGVQSATPEESE 133
>gi|356536465|ref|XP_003536758.1| PREDICTED: high mobility group B protein 7-like [Glycine max]
Length = 200
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D MPK+PPTAFF FL+DFRK F+E NPD K ++ +GK GEKW++MT EEK Y D
Sbjct: 99 DPNMPKRPPTAFFAFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVA 158
Query: 123 EKRAEFDRAMADY 135
E +AE+++AM Y
Sbjct: 159 ELKAEYEKAMESY 171
>gi|351722065|ref|NP_001236719.1| uncharacterized protein LOC100306558 [Glycine max]
gi|255628875|gb|ACU14782.1| unknown [Glycine max]
Length = 209
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 52/73 (71%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D MPK+PPTAFF FL+DFRK F+E NPD K ++ +GK GEKW++MT EEK Y D
Sbjct: 99 DPNMPKRPPTAFFVFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVA 158
Query: 123 EKRAEFDRAMADY 135
E + E+++AM Y
Sbjct: 159 ELKEEYEKAMESY 171
>gi|359484115|ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-like [Vitis vinifera]
gi|147815109|emb|CAN61363.1| hypothetical protein VITISV_034306 [Vitis vinifera]
gi|297742725|emb|CBI35359.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D MPK+PPTAFF F++DFRK ++E NPD K++ + K GEKWK+MT EEK Y D A
Sbjct: 95 DPNMPKRPPTAFFLFMDDFRKEYKESNPDSKNVSVVAKEGGEKWKSMTDEEKKPYVDKAA 154
Query: 123 EKRAEFDRAMADY 135
E +AE+D+AM Y
Sbjct: 155 ELKAEYDKAMETY 167
>gi|371721822|gb|AEX55234.1| HMG transcription factor [Allium sativum]
Length = 115
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 57/77 (74%)
Query: 66 MPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
MPK+PP+AFF F+EDFRK F+E+NPD K + A+GKA G+KWK++T EK Y A +++
Sbjct: 1 MPKRPPSAFFVFMEDFRKIFKEKNPDNKQVSAVGKAAGDKWKSLTAAEKAPYEAKAAKRK 60
Query: 126 AEFDRAMADYIKRKENG 142
AE+ + MA Y K+ +G
Sbjct: 61 AEYTKTMAAYNKKLSDG 77
>gi|312281849|dbj|BAJ33790.1| unnamed protein product [Thellungiella halophila]
Length = 185
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 76/118 (64%), Gaps = 2/118 (1%)
Query: 37 VGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMR 96
VG K + + KR T K+K K D PK+ P+AFF FLEDFR+ F+++NP++K++
Sbjct: 25 VGKRKAPAAKATKRET--RKEKRAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPNVKAVS 82
Query: 97 AIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSEFD 154
A+GKA G+KWK+M+ EK Y + A +++AE+++ M Y K E G E+ + SE +
Sbjct: 83 AVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKNMEEGSDESEKSRSEVN 140
>gi|297819892|ref|XP_002877829.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
gi|297323667|gb|EFH54088.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
Length = 185
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
Query: 37 VGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMR 96
VG K + KR T K KK K D PK+ P+AFF FLEDFR F+++NP++K++
Sbjct: 25 VGKRKAPAEKATKRETRKEKK--AKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVS 82
Query: 97 AIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
A+GKA G+KWK+M+ EK Y + A +++AE+++ M Y K E G E+ + SE ++
Sbjct: 83 AVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNMEEGSDESEKSRSEVND 141
>gi|388499756|gb|AFK37944.1| unknown [Lotus japonicus]
Length = 197
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 48 AKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWK 107
AKR T+ KK E D PK+PPTAFF FL+DFRK F+E NP K ++ +GK GEKW+
Sbjct: 85 AKRAKTEKAKKVE--DPNQPKRPPTAFFVFLDDFRKEFKEANPGSKDVKRVGKEGGEKWR 142
Query: 108 TMTYEEKVKYYDIATEKRAEFDRAMADY 135
MT EEK Y + E + E+++AMA+Y
Sbjct: 143 AMTDEEKKPYLEKVAELKEEYEKAMANY 170
>gi|42572635|ref|NP_974413.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|222423104|dbj|BAH19531.1| AT3G51880 [Arabidopsis thaliana]
gi|332645335|gb|AEE78856.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 185
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 68/100 (68%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+K K D PK+ P+AFF FLEDFR F+++NP++K++ A+GKA G+KWK+M+ EK
Sbjct: 42 KEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKA 101
Query: 116 KYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
Y + A +++AE+++ M Y K E G E+ + SE ++
Sbjct: 102 PYEEKAAKRKAEYEKQMDAYNKNLEEGSDESEKSRSEIND 141
>gi|15231065|ref|NP_190756.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|145332807|ref|NP_001078269.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|75274976|sp|O49595.1|HMGB1_ARATH RecName: Full=High mobility group B protein 1; AltName: Full=High
mobility group protein A; Short=AtHMGalpha; Short=HMG
alpha; AltName: Full=Nucleosome/chromatin assembly
factor group D 01; Short=Nucleosome/chromatin assembly
factor group D 1
gi|2832357|emb|CAA74400.1| HMG protein [Arabidopsis thaliana]
gi|3068715|gb|AAC14415.1| unknown [Arabidopsis thaliana]
gi|15912191|gb|AAL08229.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|21360557|gb|AAM47475.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|332645334|gb|AEE78855.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|332645336|gb|AEE78857.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 178
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 68/100 (68%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+K K D PK+ P+AFF FLEDFR F+++NP++K++ A+GKA G+KWK+M+ EK
Sbjct: 42 KEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKA 101
Query: 116 KYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
Y + A +++AE+++ M Y K E G E+ + SE ++
Sbjct: 102 PYEEKAAKRKAEYEKQMDAYNKNLEEGSDESEKSRSEIND 141
>gi|334185909|ref|NP_001190062.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|332645337|gb|AEE78858.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 161
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Query: 37 VGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMR 96
VG K KR T K KK K D PK+ P+AFF FLEDFR F+++NP++K++
Sbjct: 25 VGKRKAPAEKPTKRETRKEKK--AKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVS 82
Query: 97 AIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSEFD 154
A+GKA G+KWK+M+ EK Y + A +++AE+++ M Y K E G E+ + SE +
Sbjct: 83 AVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGSDESEKSRSEIN 140
>gi|168032698|ref|XP_001768855.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168032700|ref|XP_001768856.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679967|gb|EDQ66408.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679968|gb|EDQ66409.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 110
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 62/88 (70%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PPTAFF FL +FR+ F+ +NP++K + A+GKA GEKWK+M+ EK + A
Sbjct: 8 DPNAPKRPPTAFFIFLNEFREVFKRENPNVKGVTAVGKAGGEKWKSMSEAEKQPFMTKAV 67
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEED 150
+K++E+D+ ++ Y K+++ +VE E D
Sbjct: 68 QKKSEYDKTISAYNKKQDAEEVEAEESD 95
>gi|388497528|gb|AFK36830.1| unknown [Medicago truncatula]
Length = 155
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
K +A + K K E D PK+PP+AFF F+EDFRK F++ NPD K++ A+GKA G
Sbjct: 22 KGAAATKGGRKPAKGKEPKDPNKPKRPPSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAG 81
Query: 104 EKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENG 142
KWK+++ EK Y A +++AE+++ M Y K++ G
Sbjct: 82 AKWKSLSEAEKAPYAAKAEKRKAEYEKTMKAYNKKQAEG 120
>gi|116790306|gb|ABK25570.1| unknown [Picea sitchensis]
gi|224286844|gb|ACN41125.1| unknown [Picea sitchensis]
gi|294461904|gb|ADE76508.1| unknown [Picea sitchensis]
Length = 151
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 62/87 (71%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF FL++FRK +++ NP+ S+ A+GKA GEKW+ ++ EK Y A
Sbjct: 42 DPNKPKRPPSAFFVFLDEFRKEYKQANPNANSVSAVGKAGGEKWRALSDAEKAPYVAKAE 101
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEE 149
+K+AE++++MA Y K+K++ E +EE
Sbjct: 102 KKKAEYEKSMATYNKQKDSNTEEVAEE 128
>gi|449464956|ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
gi|449531370|ref|XP_004172659.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
Length = 207
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 49 KRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKT 108
K+ T+ K K +K D PK+PPTAFF F++DFRK ++E NPD K ++ + K GEKWK+
Sbjct: 94 KKSRTEKKGKKDK-DPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKS 152
Query: 109 MTYEEKVKYYDIATEKRAEFDRAM 132
MT EEK Y D A E +AE+++A+
Sbjct: 153 MTDEEKKPYQDKAAELKAEYEKAL 176
>gi|357506009|ref|XP_003623293.1| HMG1/2-like protein [Medicago truncatula]
gi|355498308|gb|AES79511.1| HMG1/2-like protein [Medicago truncatula]
gi|388511215|gb|AFK43669.1| unknown [Medicago truncatula]
Length = 170
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 53/73 (72%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF FLEDFRK F+ +NP++K++ A+GKA GEKWK++T EK Y A
Sbjct: 47 DPNKPKRPPSAFFVFLEDFRKTFKAENPNVKAVSAVGKAGGEKWKSLTKAEKAPYEAKAA 106
Query: 123 EKRAEFDRAMADY 135
+++ E+++ M Y
Sbjct: 107 KRKVEYEKLMNAY 119
>gi|388497036|gb|AFK36584.1| unknown [Medicago truncatula]
Length = 155
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
K A + K K E D PK+PP+AFF F+EDFRK F++ NPD K++ A+GKA G
Sbjct: 22 KGAVATKGGRKPAKGKEPKDPNKPKRPPSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAG 81
Query: 104 EKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENG 142
KWK+++ EK Y A +++AE+++ M Y K++ G
Sbjct: 82 AKWKSLSEAEKAPYAAKAEKRKAEYEKTMKAYNKKQAEG 120
>gi|302790391|ref|XP_002976963.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
gi|300155441|gb|EFJ22073.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
Length = 156
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 62/89 (69%), Gaps = 8/89 (8%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P TAFF FLE++RK F++++P+IK + A+GKA G+ WK +T EEK Y+D A
Sbjct: 51 DPNQPKRPATAFFVFLEEYRKTFKDKHPNIKGVAAVGKAGGDAWKRLTEEEKKPYHDKAA 110
Query: 123 EKRAEFDRAMADYIKR--------KENGK 143
+K+A++++ + +Y K+ KENGK
Sbjct: 111 QKKADYEKTLTEYKKKQEEDAKNEKENGK 139
>gi|223942599|gb|ACN25383.1| unknown [Zea mays]
gi|414881085|tpg|DAA58216.1| TPA: hypothetical protein ZEAMMB73_949955 [Zea mays]
Length = 118
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + PKKPPTAFFYF+EDFRK ++++ P +KSM+ IGKACGEKW TMT+E V + +
Sbjct: 37 DPRAPKKPPTAFFYFMEDFRKIYKQEKPSVKSMQEIGKACGEKWNTMTFE--VSIFSLQP 94
Query: 123 EKRAEF 128
+ R
Sbjct: 95 DSRVPL 100
>gi|449461783|ref|XP_004148621.1| PREDICTED: high mobility group B protein 1-like [Cucumis sativus]
Length = 169
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 65/92 (70%), Gaps = 4/92 (4%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+PP+AFF FLE+FRK ++ +NP++K++ A+GKA GEKWK++++ EK Y
Sbjct: 49 KKDPNKPKRPPSAFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEAK 108
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENSEEDSE 152
A +++AE+++ M Y ++ KV ++ +D E
Sbjct: 109 AAKRKAEYEKLMRAY----DSKKVASAADDEE 136
>gi|436424|emb|CAA54168.1| HMG 1 protein [Pisum sativum]
Length = 154
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 57/83 (68%)
Query: 60 EKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYD 119
E D PK+PP+AFF F+EDFRK F++ N D K++ A+GKA G KWK+MT EK Y
Sbjct: 38 EPKDPNKPKRPPSAFFVFMEDFRKQFKKGNADNKAVSAVGKAAGAKWKSMTEAEKAPYAA 97
Query: 120 IATEKRAEFDRAMADYIKRKENG 142
A +++AE++++M Y K++ G
Sbjct: 98 KAEKRKAEYEKSMKSYNKKQAEG 120
>gi|47027098|gb|AAT08762.1| HMG transcription factor [Hyacinthus orientalis]
Length = 158
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+EDFRK F+E+NP+ K + +GKAC KWKTM+ EK + A
Sbjct: 39 DPNKPKRPPSAFFVFMEDFRKQFKEKNPNNKQVSVVGKACWGKWKTMSAAEKAPFEARAA 98
Query: 123 EKRAEFDRAMADYIKRKENG 142
+++A++++ M Y K++ G
Sbjct: 99 KRKADYNKVMVAYNKKQSEG 118
>gi|297836478|ref|XP_002886121.1| hypothetical protein ARALYDRAFT_480649 [Arabidopsis lyrata subsp.
lyrata]
gi|297331961|gb|EFH62380.1| hypothetical protein ARALYDRAFT_480649 [Arabidopsis lyrata subsp.
lyrata]
Length = 143
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 49 KRVTTKLKK--KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
+R+ T+ +K K K D PK+PP+AFF FLEDFRK F NP+ KS+ +GKA G +W
Sbjct: 15 QRLKTRGRKPGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARW 74
Query: 107 KTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSE 152
K+MT E+K Y A ++ E+ + M Y + +G E+DS+
Sbjct: 75 KSMTEEDKAPYVAKAESRKTEYLKTMQQYNMKLASGTNRGEEDDSD 120
>gi|295913708|gb|ADG58095.1| transcription factor [Lycoris longituba]
Length = 190
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 56/80 (70%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK F+E+NP+ K + +GKA G+KWK+M+ EK Y A
Sbjct: 70 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAA 129
Query: 123 EKRAEFDRAMADYIKRKENG 142
+++AE+++ M Y K+ +G
Sbjct: 130 KRKAEYNKTMVAYNKKLADG 149
>gi|295913700|gb|ADG58091.1| transcription factor [Lycoris longituba]
Length = 162
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 57/83 (68%)
Query: 60 EKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYD 119
E D PK+PP+AFF F+E+FRK F+E+NP+ K + +GKA G+KWK+M+ EK Y
Sbjct: 39 EGKDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEA 98
Query: 120 IATEKRAEFDRAMADYIKRKENG 142
A +++AE+++ M Y K+ +G
Sbjct: 99 KAAKRKAEYNKTMVAYNKKLADG 121
>gi|295913475|gb|ADG57987.1| transcription factor [Lycoris longituba]
Length = 162
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 57/83 (68%)
Query: 60 EKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYD 119
E D PK+PP+AFF F+E+FRK F+E+NP+ K + +GKA G+KWK+M+ EK Y
Sbjct: 39 EGKDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEA 98
Query: 120 IATEKRAEFDRAMADYIKRKENG 142
A +++AE+++ M Y K+ +G
Sbjct: 99 KAAKRKAEYNKTMVAYNKKLADG 121
>gi|302754440|ref|XP_002960644.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
gi|300171583|gb|EFJ38183.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
Length = 134
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 61/86 (70%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP TAFF FLE+FR+ +++ +PD+K + AIGKA G+ WK+++ +EK Y+ A
Sbjct: 32 DPNQPKKPATAFFIFLEEFRQTYKKDHPDVKGVAAIGKAGGDMWKSLSDKEKEPYHAKAA 91
Query: 123 EKRAEFDRAMADYIKRKENGKVENSE 148
+++A++D+ + Y K+KE+G SE
Sbjct: 92 KRKADYDKDLEAYNKKKEDGSAGESE 117
>gi|302796105|ref|XP_002979815.1| hypothetical protein SELMODRAFT_18312 [Selaginella moellendorffii]
gi|302807533|ref|XP_002985461.1| hypothetical protein SELMODRAFT_18313 [Selaginella moellendorffii]
gi|300146924|gb|EFJ13591.1| hypothetical protein SELMODRAFT_18313 [Selaginella moellendorffii]
gi|300152575|gb|EFJ19217.1| hypothetical protein SELMODRAFT_18312 [Selaginella moellendorffii]
Length = 84
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 53/76 (69%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D +PK+PPTAFF FLE FR+ ++E +PD+K + A+GKA G+KW M+ EK Y + A
Sbjct: 9 DPNLPKRPPTAFFVFLESFRQQYKEDHPDVKGVAAVGKAAGDKWSKMSESEKAVYVNKAA 68
Query: 123 EKRAEFDRAMADYIKR 138
+ RA++ +MA Y K+
Sbjct: 69 QLRADYAESMAAYKKK 84
>gi|295913526|gb|ADG58011.1| transcription factor [Lycoris longituba]
Length = 171
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 56/80 (70%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK F+E+NP+ K + +GKA G+KWK+M+ EK Y A
Sbjct: 55 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAA 114
Query: 123 EKRAEFDRAMADYIKRKENG 142
+++AE+++ M Y K+ +G
Sbjct: 115 KRKAEYNKTMVAYNKKLADG 134
>gi|255574381|ref|XP_002528104.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223532493|gb|EEF34283.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 171
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF FLE+FRK F+++NP + S+ A+GKA G KWK+M+ EK Y A
Sbjct: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPSVTSVAAVGKAGGAKWKSMSSAEKAPYEAKAA 110
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSE 152
+K+ E+ + M Y K++E+ ++ EE+S+
Sbjct: 111 KKKDEYGKLMNAYNKKQES-TADDGEEESD 139
>gi|157382896|gb|ABV48883.1| high mobility group protein B1 [Physcomitrella patens]
Length = 215
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
DS MPK+PP+A+F F+E FRK F+ NPD+K + A KA GEKW +M+ EEK Y A+
Sbjct: 133 DSDMPKRPPSAYFIFMETFRKEFKAANPDVKGVTASAKAGGEKWLSMSEEEKAPYVAEAS 192
Query: 123 EKRAEFDRAMADYIKRKENGK 143
++ ++++AM Y +NGK
Sbjct: 193 VRKGQYEQAMTAY----KNGK 209
>gi|116778852|gb|ABK21026.1| unknown [Picea sitchensis]
gi|116782574|gb|ABK22556.1| unknown [Picea sitchensis]
gi|116782678|gb|ABK22606.1| unknown [Picea sitchensis]
gi|116782786|gb|ABK22657.1| unknown [Picea sitchensis]
gi|116782898|gb|ABK22712.1| unknown [Picea sitchensis]
gi|116791878|gb|ABK26144.1| unknown [Picea sitchensis]
gi|148907501|gb|ABR16881.1| unknown [Picea sitchensis]
gi|224284566|gb|ACN40016.1| unknown [Picea sitchensis]
gi|224285212|gb|ACN40332.1| unknown [Picea sitchensis]
gi|224286734|gb|ACN41070.1| unknown [Picea sitchensis]
Length = 157
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Query: 50 RVTTKLKKKHEKL--DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWK 107
+V+++ +KK K D PK+P +AFF F+EDFRK ++E+NP++KS+ +GKA G+KWK
Sbjct: 33 KVSSRQEKKGRKAAKDPNKPKRPASAFFVFMEDFRKTYKEKNPNVKSVSVVGKAGGDKWK 92
Query: 108 TMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEE 149
+M+ +K Y A +++ E+++ MA Y ++ + +++EE
Sbjct: 93 SMSEADKAPYVAKAGKRKTEYEKNMAAYNNKQTSTAGDSAEE 134
>gi|295913458|gb|ADG57979.1| transcription factor [Lycoris longituba]
Length = 179
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 56/80 (70%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK F+E+NP+ K + +GKA G+KWK+M+ EK Y A
Sbjct: 60 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAA 119
Query: 123 EKRAEFDRAMADYIKRKENG 142
+++AE+++ M Y K+ +G
Sbjct: 120 KRKAEYNKTMVAYNKKLADG 139
>gi|2832355|emb|CAA74403.1| HMG protein [Arabidopsis thaliana]
Length = 138
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 10/126 (7%)
Query: 38 GIEKEGKSISAKRVTTKLKK--KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSM 95
G K G + + +R+ T+ +K K K D PK+PP+AFF FLEDFRK F NP+ KS+
Sbjct: 4 GESKAGATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSV 63
Query: 96 RAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEED----- 150
+GKA G +WK+MT E+K Y A ++ E+ + + Y + +G N EED
Sbjct: 64 ATVGKAAGARWKSMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGT--NREEDDSDKS 121
Query: 151 -SEFDE 155
SE DE
Sbjct: 122 KSEVDE 127
>gi|302797885|ref|XP_002980703.1| hypothetical protein SELMODRAFT_38818 [Selaginella moellendorffii]
gi|300151709|gb|EFJ18354.1| hypothetical protein SELMODRAFT_38818 [Selaginella moellendorffii]
Length = 83
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 60/83 (72%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
KK D PK+P TAFF FLE++RK F++++P+IK + A+GKA G+ WK +T EEK
Sbjct: 1 KKKNAADPNQPKRPATAFFVFLEEYRKTFKDKHPNIKGVAAVGKAGGDAWKRLTEEEKKP 60
Query: 117 YYDIATEKRAEFDRAMADYIKRK 139
Y+D A +K+A++++ + +Y K++
Sbjct: 61 YHDKAAQKKADYEKTLTEYKKKQ 83
>gi|157382900|gb|ABV48885.1| high mobility group protein B3 [Physcomitrella patens]
Length = 158
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PPTAFF FL +FR+ F+ +NP++K + A+GKA GEKWK+M+ EK + A
Sbjct: 49 DPNAPKRPPTAFFIFLNEFREVFKRENPNVKGVTAVGKAGGEKWKSMSEAEKQPFMTKAV 108
Query: 123 EKRAEFDRAMADYIKRK 139
+K++E+D+ ++ Y K++
Sbjct: 109 QKKSEYDKTISAYNKKQ 125
>gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
Length = 141
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 65/102 (63%)
Query: 49 KRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKT 108
K+ T K K+ D PK+PP+AFF F+E+FRK ++E++P+ KS+ +GKA G+KWK
Sbjct: 18 KKATESKKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGDKWKQ 77
Query: 109 MTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEED 150
++ EEK Y A +++AE+ + M Y K+ G ++ E D
Sbjct: 78 LSDEEKAPYQAKAEKRKAEYQKNMDAYNKKLAAGDADDEESD 119
>gi|407971018|ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycine max]
gi|255625939|gb|ACU13314.1| unknown [Glycine max]
Length = 166
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 5/92 (5%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF FLE+FRK F+ +NP++K++ +GKA GEKWK+++ EK Y A
Sbjct: 49 DPNKPKRPPSAFFVFLEEFRKTFKAENPNVKAVSVVGKAGGEKWKSLSSAEKAPYESKAA 108
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFD 154
+++AE+++ + Y K++ +S +D E D
Sbjct: 109 KRKAEYEKLIKAYDKKQ-----ASSADDEESD 135
>gi|388504718|gb|AFK40425.1| unknown [Lotus japonicus]
Length = 152
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 56/80 (70%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+EDFRK F ++NP+ K++ A+GKA G KWK+M+ EK Y A
Sbjct: 40 DPNKPKRPPSAFFVFMEDFRKIFNKENPENKAVSAVGKAAGAKWKSMSEAEKAPYVAKAE 99
Query: 123 EKRAEFDRAMADYIKRKENG 142
+++A++++ M Y K++ G
Sbjct: 100 KRKADYEKTMKAYNKKQAEG 119
>gi|168028752|ref|XP_001766891.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681870|gb|EDQ68293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P TAFF FL +FR+ F+++NP++K + A+GKA GEKWK+M+ EK Y A
Sbjct: 53 DPNAPKRPATAFFIFLNEFREVFKKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAV 112
Query: 123 EKRAEFDRAMADYIKRK 139
+K++E+D+ ++ Y K++
Sbjct: 113 QKKSEYDKTLSAYNKKQ 129
>gi|157382898|gb|ABV48884.1| high mobility group protein B2 [Physcomitrella patens]
Length = 165
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P TAFF FL +FR+ F+++NP++K + A+GKA GEKWK+M+ EK Y A
Sbjct: 53 DPNAPKRPATAFFIFLNEFREVFKKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAV 112
Query: 123 EKRAEFDRAMADYIKRK 139
+K++E+D+ ++ Y K++
Sbjct: 113 QKKSEYDKTLSAYNKKQ 129
>gi|225448398|ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 isoform 1 [Vitis
vinifera]
gi|147854340|emb|CAN83423.1| hypothetical protein VITISV_023376 [Vitis vinifera]
Length = 166
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 65/87 (74%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF FLE+FRK +++++P++K++ A+GKA GEKWK+++ +K Y A
Sbjct: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAA 111
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEE 149
++++++++ MA Y K++E+ ++ EE
Sbjct: 112 KRKSDYEKLMAAYNKKQESMADDDEEE 138
>gi|388497798|gb|AFK36965.1| unknown [Medicago truncatula]
Length = 170
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 52/73 (71%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF FLEDFRK F+ +NP++K++ A+GKA G KWK++T EK Y A
Sbjct: 47 DPNKPKRPPSAFFVFLEDFRKTFKAENPNVKAVSAVGKAGGGKWKSLTKAEKAPYEAKAV 106
Query: 123 EKRAEFDRAMADY 135
+++ E+++ M Y
Sbjct: 107 KRKVEYEKLMDAY 119
>gi|449455609|ref|XP_004145545.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449511984|ref|XP_004164108.1| PREDICTED: HMG1/2-like protein-like isoform 1 [Cucumis sativus]
gi|449511988|ref|XP_004164109.1| PREDICTED: HMG1/2-like protein-like isoform 2 [Cucumis sativus]
Length = 146
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 61/90 (67%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+E+FRK F E+NP+ K++ A+GKA G+KWK+M+ EK Y A
Sbjct: 35 DPNKPKRPASAFFVFMEEFRKKFNEENPNNKAVSAVGKAAGQKWKSMSDAEKAPYIAKAD 94
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSE 152
+++ E+++ M Y K++ +G E++SE
Sbjct: 95 KRKVEYEKNMKAYNKKQASGANAAEEDESE 124
>gi|224097317|ref|XP_002310906.1| high mobility group family [Populus trichocarpa]
gi|118483462|gb|ABK93630.1| unknown [Populus trichocarpa]
gi|222853809|gb|EEE91356.1| high mobility group family [Populus trichocarpa]
Length = 201
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 50/70 (71%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PPTAFF F++DFRK ++E NPD K ++ + K G +WK+MT EEK +Y D A
Sbjct: 101 DPNAPKRPPTAFFLFMDDFRKEYKEANPDSKDVKKVAKEGGVRWKSMTDEEKKQYVDKAA 160
Query: 123 EKRAEFDRAM 132
E +AE D+A+
Sbjct: 161 ELKAENDKAL 170
>gi|224112525|ref|XP_002316220.1| high mobility group family [Populus trichocarpa]
gi|222865260|gb|EEF02391.1| high mobility group family [Populus trichocarpa]
Length = 176
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Query: 47 SAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
S KRV K+K K D PK+PP+AFF FLE+FRK +++++P++K++ A+GKA GEKW
Sbjct: 39 SKKRVK---KEKITKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
Query: 107 KTMTYEEKVKYYDIATEKRAEFDRAMADYIKRK 139
K+++ EK Y A ++++++++ M Y K++
Sbjct: 96 KSLSAAEKAPYEAKAAKRKSDYEKLMTAYNKKQ 128
>gi|168050181|ref|XP_001777538.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671023|gb|EDQ57581.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 314
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 51/73 (69%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
DS MPK+PP+A+F F+E FRK F+ NPD+K + A KA GEKW +M+ EEK Y A+
Sbjct: 189 DSDMPKRPPSAYFIFMETFRKEFKAANPDVKGVTASAKAGGEKWLSMSEEEKAPYVAEAS 248
Query: 123 EKRAEFDRAMADY 135
++ ++++AM Y
Sbjct: 249 VRKGQYEQAMTAY 261
>gi|729737|sp|P40620.1|HMGL_VICFA RecName: Full=HMG1/2-like protein
Length = 149
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+ DFR+ +++ +P+ KS+ A+GKACGE+WK+++ EEK Y D A
Sbjct: 41 DPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRAL 100
Query: 123 EKRAEFDRAMADYIKRKEN 141
+K+ E++ + Y K+ E
Sbjct: 101 KKKEEYEITLQAYNKKLEG 119
>gi|115470082|ref|NP_001058640.1| Os06g0728000 [Oryza sativa Japonica Group]
gi|3885888|gb|AAC78104.1| high mobility group protein [Oryza sativa Japonica Group]
gi|23345287|gb|AAN28722.1| HMG1 protein [Oryza sativa Indica Group]
gi|30267833|gb|AAP21609.1| HMGB1 [Oryza sativa Indica Group]
gi|54291150|dbj|BAD61823.1| HMGB1 [Oryza sativa Japonica Group]
gi|113596680|dbj|BAF20554.1| Os06g0728000 [Oryza sativa Japonica Group]
gi|213959190|gb|ACJ54929.1| HMG protein [Oryza sativa Japonica Group]
gi|215692803|dbj|BAG88247.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636260|gb|EEE66392.1| hypothetical protein OsJ_22728 [Oryza sativa Japonica Group]
Length = 157
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 62/94 (65%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
KS A++ K +K D PK+ P+AFF F+E+FRK F+E+NP KS+ A+GKA G
Sbjct: 19 KSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAG 78
Query: 104 EKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIK 137
++WK++T +K Y A + +AE+++A+A Y K
Sbjct: 79 DRWKSLTEADKAPYVAKANKLKAEYNKAIAAYNK 112
>gi|225448400|ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 isoform 2 [Vitis
vinifera]
Length = 156
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 61/79 (77%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF FLE+FRK +++++P++K++ A+GKA GEKWK+++ +K Y A
Sbjct: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAA 111
Query: 123 EKRAEFDRAMADYIKRKEN 141
++++++++ MA Y K++E+
Sbjct: 112 KRKSDYEKLMAAYNKKQES 130
>gi|357123079|ref|XP_003563240.1| PREDICTED: DNA-binding protein MNB1B-like [Brachypodium distachyon]
Length = 160
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 62/94 (65%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
KS A++ K +K D PK+ P+AFF F+++FRK F+E+NP KS+ A+GKA G
Sbjct: 19 KSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMDEFRKEFKEKNPKNKSVAAVGKAAG 78
Query: 104 EKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIK 137
E+WKT++ +K Y A + +AE+++A+A Y K
Sbjct: 79 ERWKTLSESDKAPYVAKANKLKAEYNKAIAAYNK 112
>gi|1052956|gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
Length = 146
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+EDFRK ++E++P+ KS+ A+GKA G+KWK +T EK + A
Sbjct: 32 DPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKWKQLTDAEKAPFIAKAE 91
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEE 149
+++ E++++M Y RK+ G+ + EE
Sbjct: 92 KRKQEYEKSMQAY-NRKQAGEAADEEE 117
>gi|116785888|gb|ABK23898.1| unknown [Picea sitchensis]
Length = 220
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP TAFF F++DFRK ++E NPD+K +GK G KWK M+ E+K Y + A
Sbjct: 104 DPNQPKKPATAFFVFMDDFRKTYKETNPDVKGAAQVGKEGGLKWKAMSDEDKKPYLEKAA 163
Query: 123 EKRAEFDRAMADY 135
E +AE+++AM+ Y
Sbjct: 164 ELKAEYEKAMSKY 176
>gi|118484946|gb|ABK94338.1| unknown [Populus trichocarpa]
Length = 171
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 61/86 (70%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+K K D PK+PP++FF FLE+FRK +++++P++K++ A+GKA GEKWK+M+ EK
Sbjct: 45 KEKITKKDPDKPKRPPSSFFVFLEEFRKIYKQEHPNMKAVSAVGKAGGEKWKSMSAAEKA 104
Query: 116 KYYDIATEKRAEFDRAMADYIKRKEN 141
Y A K++++ + M Y K++E
Sbjct: 105 PYEAKAAIKKSDYGKLMTAYSKKQET 130
>gi|18394900|ref|NP_564124.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|75220405|sp|P93047.1|HMGB3_ARATH RecName: Full=High mobility group B protein 3; AltName: Full=High
mobility group protein B 2; Short=AtHMGbeta2; Short=HMG
beta 2; AltName: Full=Nucleosome/chromatin assembly
factor group D 03; Short=Nucleosome/chromatin assembly
factor group D 3
gi|15724174|gb|AAL06479.1|AF411789_1 At1g20690/F2D10_15 [Arabidopsis thaliana]
gi|1694976|emb|CAA70691.1| HMG1 [Arabidopsis thaliana]
gi|2832361|emb|CAA74402.1| HMG protein [Arabidopsis thaliana]
gi|20453325|gb|AAM19901.1| At1g20690/F2D10_15 [Arabidopsis thaliana]
gi|21537072|gb|AAM61413.1| unknown [Arabidopsis thaliana]
gi|22530942|gb|AAM96975.1| expressed protein [Arabidopsis thaliana]
gi|23198424|gb|AAN15739.1| expressed protein [Arabidopsis thaliana]
gi|332191888|gb|AEE30009.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 141
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 59/93 (63%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+EDFR ++E++P KS+ A+GKA GEKWK+++ EK Y A
Sbjct: 31 DPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKAD 90
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
+++ E+++ M Y K+ E G E+ E D E
Sbjct: 91 KRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSE 123
>gi|295913696|gb|ADG58089.1| transcription factor [Lycoris longituba]
Length = 183
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK F+E+NP+ K + +GKA G+KWK+M+ EK Y A
Sbjct: 63 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 122
Query: 123 EKRAEFDRAMADYIKRKENG 142
+++ ++++ M Y K+ +G
Sbjct: 123 KRKVDYNKTMVAYNKKLADG 142
>gi|295913393|gb|ADG57949.1| transcription factor [Lycoris longituba]
Length = 162
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK F+E+NP+ K + +GKA G+KWK+M+ EK Y A
Sbjct: 42 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 101
Query: 123 EKRAEFDRAMADYIKRKENG 142
+++ ++++ M Y K+ +G
Sbjct: 102 KRKVDYNKTMVAYNKKLADG 121
>gi|145328748|ref|NP_001077909.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|222423535|dbj|BAH19737.1| AT2G17560 [Arabidopsis thaliana]
gi|330251559|gb|AEC06653.1| high mobility group B4 protein [Arabidopsis thaliana]
Length = 134
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 49 KRVTTKLKK--KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
+R+ T+ +K K K D PK+PP+AFF FLEDFRK F NP+ KS+ +GKA G +W
Sbjct: 15 QRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARW 74
Query: 107 KTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEED------SEFDEYE 157
K MT E+K Y A ++ E+ + + Y + +G N EED SE DE E
Sbjct: 75 KAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGT--NREEDDSDKSKSEVDEAE 129
>gi|106879575|emb|CAJ38371.1| HMG-protein [Plantago major]
Length = 212
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF FLE+FR+ F+++NP+IK++ A+GKA GEKWK++T EK Y A ++++E+
Sbjct: 101 RPPSAFFVFLEEFRQTFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEY 160
Query: 129 DRAMADYIKRKENGKVENSEEDSE 152
++ M Y K++E+ + ++E SE
Sbjct: 161 EKLMNAYNKKQESS-ADEADEGSE 183
>gi|224081483|ref|XP_002306429.1| high mobility group family [Populus trichocarpa]
gi|222855878|gb|EEE93425.1| high mobility group family [Populus trichocarpa]
Length = 144
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
TK KK K D PK+P +AFF F+EDFRK ++E +P+ KS+ A+GKA G+KWK+++
Sbjct: 24 AGTKASKKAAK-DPNKPKRPASAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLS 82
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSE 148
EK Y A +++ E+++ MA Y KR G + S+
Sbjct: 83 EAEKAPYAAKAEKRKFEYNKDMAAYNKRLAGGNDDESD 120
>gi|255566393|ref|XP_002524182.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223536551|gb|EEF38197.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 155
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 76/118 (64%), Gaps = 5/118 (4%)
Query: 22 MVLRKRPTRHSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDF 81
++ +K+P+ + A K GK ++ R KKK+ D+ PK+P +AFF F+++F
Sbjct: 8 VIAQKKPSSKVLKARKAESKPGKEEASSR-----KKKNVSKDTDAPKRPASAFFIFMDEF 62
Query: 82 RKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRK 139
RK F+E+ PD K++ A+GKA GEKWK+++ +K Y + A +++AE+++ + Y ++K
Sbjct: 63 RKYFKEKYPDNKAVSAVGKAGGEKWKSLSETDKAPYLEKALKRKAEYEKVLEAYKQQK 120
>gi|145323962|ref|NP_001077570.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|332191890|gb|AEE30011.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 140
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 59/93 (63%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+EDFR ++E++P KS+ A+GKA GEKWK+++ EK Y A
Sbjct: 31 DPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKAD 90
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
+++ E+++ M Y K+ E G E+ E D E
Sbjct: 91 KRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSE 123
>gi|224098541|ref|XP_002311212.1| high mobility group family [Populus trichocarpa]
gi|222851032|gb|EEE88579.1| high mobility group family [Populus trichocarpa]
Length = 179
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 61/86 (70%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+K K D PK+PP++FF FLE+FRK +++++P++K++ A+GKA GEKWK+M+ EK
Sbjct: 45 KEKITKKDPDKPKRPPSSFFVFLEEFRKIYKQEHPNMKAVSAVGKAGGEKWKSMSAAEKA 104
Query: 116 KYYDIATEKRAEFDRAMADYIKRKEN 141
Y A K++++ + M Y K++E
Sbjct: 105 PYEAKAAIKKSDYGKLMTAYSKKQET 130
>gi|309243128|gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirsutum]
Length = 139
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+E+FRK ++E NPD +S+ A+GKA GEKWK+MT EK Y A
Sbjct: 34 DPNKPKRPASAFFVFMEEFRKQYKEANPDNRSVSAVGKAGGEKWKSMTDAEKAPYVQKAE 93
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFD 154
++++E+++ M Y N K+ D E D
Sbjct: 94 KRKSEYNKKMQAY-----NLKLAGGGNDDESD 120
>gi|295913307|gb|ADG57910.1| transcription factor [Lycoris longituba]
Length = 138
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK F+E+NP+ K + +GKA G+KWK+M+ EK Y A
Sbjct: 18 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 77
Query: 123 EKRAEFDRAMADYIKRKENG 142
+++ ++++ M Y K+ +G
Sbjct: 78 KRKVDYNKTMVAYNKKLADG 97
>gi|388522261|gb|AFK49192.1| unknown [Lotus japonicus]
Length = 173
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 50/67 (74%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF FLEDFRK F+ +NP++K + A+GKA GEKWK++T EK Y A +++AE+
Sbjct: 52 RPPSAFFVFLEDFRKTFKAENPNVKGVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKAEY 111
Query: 129 DRAMADY 135
++ + Y
Sbjct: 112 EKLINAY 118
>gi|21592453|gb|AAM64404.1| putative HMG protein [Arabidopsis thaliana]
Length = 138
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 10/115 (8%)
Query: 49 KRVTTKLKKKHEKL--DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
+R+ T+ +K K D PK+PP+AFF FLEDFRK F NP+ KS+ +GKA G +W
Sbjct: 15 QRLKTRGRKAGNKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARW 74
Query: 107 KTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEED------SEFDE 155
K+MT E+K Y A ++ E+ + + Y + +G N EED SE DE
Sbjct: 75 KSMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGT--NREEDDSDKSKSEVDE 127
>gi|359386154|gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]
Length = 165
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 59/82 (71%)
Query: 58 KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
K K D PK+PP+AFF FLE+FRK +++++P++K++ A+GKA GEKWK++T EK +
Sbjct: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
Query: 118 YDIATEKRAEFDRAMADYIKRK 139
A +++ ++++ M Y K++
Sbjct: 107 EAKAAKRKLDYEKLMTAYNKKQ 128
>gi|15227862|ref|NP_179347.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|145323080|ref|NP_001031364.2| high mobility group B4 protein [Arabidopsis thaliana]
gi|310947092|sp|Q42344.1|HMGB4_ARATH RecName: Full=High mobility group B protein 4; AltName: Full=High
mobility group protein G; Short=AtHMGgamma; Short=HMG
gamma; AltName: Full=Nucleosome/chromatin assembly
factor group D 04; Short=Nucleosome/chromatin assembly
factor group D 4
gi|13926177|gb|AAK49570.1|AF370562_1 putative HMG protein [Arabidopsis thaliana]
gi|4914377|gb|AAD32913.1| putative HMG protein [Arabidopsis thaliana]
gi|23297615|gb|AAN12992.1| putative HMG protein [Arabidopsis thaliana]
gi|330251557|gb|AEC06651.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|330251558|gb|AEC06652.1| high mobility group B4 protein [Arabidopsis thaliana]
Length = 138
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 10/115 (8%)
Query: 49 KRVTTKLKK--KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
+R+ T+ +K K K D PK+PP+AFF FLEDFRK F NP+ KS+ +GKA G +W
Sbjct: 15 QRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARW 74
Query: 107 KTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEED------SEFDE 155
K MT E+K Y A ++ E+ + + Y + +G N EED SE DE
Sbjct: 75 KAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGT--NREEDDSDKSKSEVDE 127
>gi|295913099|gb|ADG57812.1| transcription factor [Lycoris longituba]
Length = 120
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF F+EDFRK F+E+NP KS+ A+GKA GE+WK+M+ EK + A
Sbjct: 6 DPNKPKRAPSAFFVFMEDFRKEFKEKNPKNKSVAAVGKAGGERWKSMSDAEKAPFVKKAE 65
Query: 123 EKRAEFDRAMADYIK----RKENGKVENSEED 150
+ +AE+++ M Y K + +N VE E D
Sbjct: 66 KLKAEYEKKMVAYNKGEKVKDDNADVEEEESD 97
>gi|356508616|ref|XP_003523051.1| PREDICTED: HMG1/2-like protein-like [Glycine max]
Length = 152
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Query: 45 SISAKRVTTKLKKKHEKL----DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGK 100
+++ K TK +K K D PK+PP+AFF F+E+FRK F +++PD K++ A+GK
Sbjct: 18 AVNKKGAATKTRKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPDNKAVSAVGK 77
Query: 101 ACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENG 142
A G KWKTM+ EK Y + +++ E+++ M Y K++ G
Sbjct: 78 AAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEG 119
>gi|18394898|ref|NP_564123.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|75219648|sp|O49596.1|HMGB2_ARATH RecName: Full=High mobility group B protein 2; AltName: Full=High
mobility group protein B 1; Short=AtHMGbeta1; Short=HMG
beta 1; AltName: Full=Nucleosome/chromatin assembly
factor group D 02; Short=Nucleosome/chromatin assembly
factor group D 2
gi|13877971|gb|AAK44063.1|AF370248_1 unknown protein [Arabidopsis thaliana]
gi|2832359|emb|CAA74401.1| HMG protein [Arabidopsis thaliana]
gi|17104699|gb|AAL34238.1| unknown protein [Arabidopsis thaliana]
gi|21536964|gb|AAM61305.1| unknown [Arabidopsis thaliana]
gi|26452113|dbj|BAC43146.1| unknown protein [Arabidopsis thaliana]
gi|225897948|dbj|BAH30306.1| hypothetical protein [Arabidopsis thaliana]
gi|332191885|gb|AEE30006.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 144
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 59/93 (63%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+EDFR+ F+++NP KS+ +GKA G+KWK+++ EK Y A
Sbjct: 34 DPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAE 93
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
+++ E+++ + Y K+ E G E+ E D E
Sbjct: 94 KRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSE 126
>gi|145323960|ref|NP_001077569.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|332191887|gb|AEE30008.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 143
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 59/93 (63%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+EDFR+ F+++NP KS+ +GKA G+KWK+++ EK Y A
Sbjct: 34 DPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAE 93
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
+++ E+++ + Y K+ E G E+ E D E
Sbjct: 94 KRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSE 126
>gi|312282031|dbj|BAJ33881.1| unnamed protein product [Thellungiella halophila]
Length = 141
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 62/93 (66%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+E+FR+ +++++P+ KS+ A+GKA G+KWK+++ EK Y A
Sbjct: 31 DPNKPKRPASAFFVFMEEFRETYKKEHPNNKSVAAVGKAGGQKWKSLSDSEKAPYQAKAD 90
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
+++ E+++ M Y K++E G E+ E D E
Sbjct: 91 KRKVEYEKNMNAYNKKQEEGPKEDEESDKSVSE 123
>gi|359476973|ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
vinifera]
Length = 156
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 72/118 (61%), Gaps = 3/118 (2%)
Query: 35 AAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKS 94
A + ++K+G + K+ KK+ D PK+P +AFF F+E+FRK ++E++P KS
Sbjct: 18 ARLSVKKKGAAAVGKKTA---KKEKAVKDPNKPKRPASAFFVFMEEFRKQYKEKHPANKS 74
Query: 95 MRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSE 152
+ +GKA G+KWK+++ EK Y A +++ E++++M Y KR G EE+S+
Sbjct: 75 VSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMAEGPTAAEEEESD 132
>gi|2196548|gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
Length = 142
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK ++E++P+ KS+ A+GKA G+ WK ++ EK Y A
Sbjct: 32 DPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAAVGKAGGDAWKKLSEAEKAPYQAKAE 91
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEED 150
+++AE+ + M D RK+ G E E D
Sbjct: 92 KRKAEYQKNM-DAYNRKQAGDAEEDESD 118
>gi|312281681|dbj|BAJ33706.1| unnamed protein product [Thellungiella halophila]
Length = 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 60/93 (64%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+EDFR+ F++++P KS+ A+GKA G+KWK+++ EK Y A
Sbjct: 34 DPNKPKRPASAFFVFMEDFRETFKKEHPKNKSVAAVGKAAGDKWKSLSDAEKAPYVAKAE 93
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
+++ ++++ M Y K+ E G E+ E D E
Sbjct: 94 KRKVDYEKNMKAYNKKLEEGPKEDEESDKSVSE 126
>gi|118484838|gb|ABK94286.1| unknown [Populus trichocarpa]
Length = 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
TK KK K D PK+P +AFF F+EDFRK ++E +P+ KS+ A+GKA G+KWK+++
Sbjct: 24 AGTKASKKAAK-DPNKPKRPASAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLS 82
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSE 148
EK + A +++ E+++ MA Y KR G + S+
Sbjct: 83 EAEKAPFAAKAEKRKFEYNKDMAAYNKRLAGGNDDESD 120
>gi|297845042|ref|XP_002890402.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
lyrata]
gi|297336244|gb|EFH66661.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
lyrata]
Length = 141
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 60/93 (64%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+EDFR+ +++++P KS+ A+GKA GEKWK+++ EK Y A
Sbjct: 33 DPNKPKRPSSAFFVFMEDFRETYKKEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKAD 92
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
+++ E+++ M Y K+ E G E+ E D E
Sbjct: 93 KRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSE 125
>gi|295913196|gb|ADG57857.1| transcription factor [Lycoris longituba]
Length = 143
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E FRK F+++NP KS+ A+GKA GE+WK+M+ EK + A
Sbjct: 29 DPNKPKRPPSAFFVFMEGFRKEFKDKNPKNKSIAAVGKAGGERWKSMSDSEKAPFVSKAE 88
Query: 123 EKRAEFDRAMADYIK----RKENGKVENSEED 150
+ +AE+ + M + K R +N ++E E D
Sbjct: 89 KLKAEYGKKMNAHNKGEKLRDDNAELEEEESD 120
>gi|255571919|ref|XP_002526902.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223533801|gb|EEF35533.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 190
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 57/73 (78%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF FLEDFRK +++++P++K++ A+GKA GEKWK+M+ EK + A ++++
Sbjct: 56 PKRPPSAFFVFLEDFRKVYKQEHPNVKAVSAVGKAGGEKWKSMSNAEKSPFEAKAAKRKS 115
Query: 127 EFDRAMADYIKRK 139
++++ M Y K++
Sbjct: 116 DYEKLMTAYNKKQ 128
>gi|351725567|ref|NP_001236841.1| HMG1/2-like protein [Glycine max]
gi|123379|sp|P26585.1|HMGL_SOYBN RecName: Full=HMG1/2-like protein; AltName: Full=Protein SB11
gi|18645|emb|CAA41200.1| HMG-1 like protein gene [Glycine max]
Length = 152
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Query: 37 VGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMR 96
+ + K+G + A++ K K D PK+PP+AFF F+E+FRK F +++P+ K++
Sbjct: 17 LAVNKKGAATKARKPAGKGKAAK---DPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVS 73
Query: 97 AIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENG 142
A+GKA G KWKTM+ EK Y + +++ E+++ M Y K++ G
Sbjct: 74 AVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEG 119
>gi|302803281|ref|XP_002983394.1| hypothetical protein SELMODRAFT_117986 [Selaginella moellendorffii]
gi|300149079|gb|EFJ15736.1| hypothetical protein SELMODRAFT_117986 [Selaginella moellendorffii]
Length = 123
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 57/78 (73%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP TAFF FLE+FR+ +++ +PD+K + AIGKA G+ WK+++ +EK Y+ A
Sbjct: 18 DPNQPKKPATAFFIFLEEFRQTYKKDHPDVKGVAAIGKAGGDMWKSLSDKEKEPYHAKAA 77
Query: 123 EKRAEFDRAMADYIKRKE 140
+++A++D+ + Y K+KE
Sbjct: 78 KRKADYDKDLEAYNKKKE 95
>gi|296088654|emb|CBI37645.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 59/90 (65%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+E+FRK ++E++P KS+ +GKA G+KWK+++ EK Y A
Sbjct: 41 DPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAE 100
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSE 152
+++ E++++M Y KR G EE+S+
Sbjct: 101 KRKTEYNKSMQAYNKRMAEGPTAAEEEESD 130
>gi|217075707|gb|ACJ86213.1| unknown [Medicago truncatula]
gi|388513073|gb|AFK44598.1| unknown [Medicago truncatula]
Length = 142
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+ DFR+ +++ +P+ KS+ A+GKACGE WK+M+ E+K Y A
Sbjct: 33 DPNKPKRPPSAFFVFMSDFREQYKKDHPNNKSVAAVGKACGEAWKSMSEEDKAPYAARAL 92
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEED 150
+K+ E++ A Y K+ E GK E D
Sbjct: 93 KKKEEYEVATQAYNKKLE-GKDEEDGSD 119
>gi|115447831|ref|NP_001047695.1| Os02g0670400 [Oryza sativa Japonica Group]
gi|50251344|dbj|BAD28320.1| putative high mobility group protein [Oryza sativa Japonica Group]
gi|50252158|dbj|BAD28154.1| putative high mobility group protein [Oryza sativa Japonica Group]
gi|113537226|dbj|BAF09609.1| Os02g0670400 [Oryza sativa Japonica Group]
Length = 145
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 66/102 (64%), Gaps = 6/102 (5%)
Query: 43 GKSISAKRVTTKLK------KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMR 96
GK+ ++K+ +LK K+ + S PK+PP+AFF F+ +FR+ +Q +PD KS+
Sbjct: 3 GKADASKKGEGRLKAAGGAGKRKKAAASGKPKRPPSAFFVFMSEFRQEYQAAHPDNKSVA 62
Query: 97 AIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKR 138
A+ KA GEKW+ M+ +EK Y D A +K+ ++++ A++ K+
Sbjct: 63 AVSKAAGEKWRAMSEQEKAPYVDKAGQKKQDYEKTKANFDKK 104
>gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 59/93 (63%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+EDFR ++E++P KS+ A+GKA GEKWK+++ EK Y A
Sbjct: 552 DPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKAD 611
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
+++ E+++ M Y K+ E G E+ E D E
Sbjct: 612 KRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSE 644
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 59/93 (63%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+EDFR+ F+++NP KS+ +GKA G+KWK+++ EK Y A
Sbjct: 411 DPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAE 470
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
+++ E+++ + Y K+ E G E+ E D E
Sbjct: 471 KRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSE 503
>gi|15237040|ref|NP_195282.1| high mobility group B5 protein [Arabidopsis thaliana]
gi|75219649|sp|O49597.1|HMGB5_ARATH RecName: Full=High mobility group B protein 5; AltName: Full=High
mobility group protein D; Short=AtHMGdelta; Short=HMG
delta; AltName: Full=Nucleosome/chromatin assembly
factor group D 05; Short=Nucleosome/chromatin assembly
factor group D 5
gi|2832363|emb|CAA74404.1| HMG protein [Arabidopsis thaliana]
gi|3367575|emb|CAA20027.1| HMG delta protein [Arabidopsis thaliana]
gi|7270508|emb|CAB80273.1| HMG delta protein [Arabidopsis thaliana]
gi|21553743|gb|AAM62836.1| HMG delta protein [Arabidopsis thaliana]
gi|98961063|gb|ABF59015.1| At4g35570 [Arabidopsis thaliana]
gi|222423786|dbj|BAH19859.1| AT4G35570 [Arabidopsis thaliana]
gi|332661132|gb|AEE86532.1| high mobility group B5 protein [Arabidopsis thaliana]
Length = 125
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKPP+ FF FL+DFRK F NPD KS+ +G+A G+KWKTMT EE+ + +
Sbjct: 30 DPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERAPFVAKSQ 89
Query: 123 EKRAEFDRAMADYIKRKENG 142
K+ E+ M Y NG
Sbjct: 90 SKKTEYAVTMQQYNMELANG 109
>gi|79318286|ref|NP_001031074.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|297845040|ref|XP_002890401.1| hypothetical protein ARALYDRAFT_472301 [Arabidopsis lyrata subsp.
lyrata]
gi|297336243|gb|EFH66660.1| hypothetical protein ARALYDRAFT_472301 [Arabidopsis lyrata subsp.
lyrata]
gi|332191886|gb|AEE30007.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 142
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 59/93 (63%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+EDFR+ F+++NP KS+ +GKA G+KWK+++ EK Y A
Sbjct: 34 DPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAE 93
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
+++ E+++ + Y K+ E G E+ E D E
Sbjct: 94 KRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSE 126
>gi|4468042|emb|CAB37859.1| unnamed protein product [Vicia faba var. minor]
Length = 74
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 53/73 (72%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+ DFR+ +++ +P+ KS+ A+GKACGE+WK+++ EEK Y D A
Sbjct: 2 DPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRAL 61
Query: 123 EKRAEFDRAMADY 135
+K+ E++ + Y
Sbjct: 62 KKKEEYEITLQAY 74
>gi|308569654|gb|ADO34793.1| high mobility group box 2 protein [Gossypium hirsutum]
Length = 146
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Query: 49 KRVTTKLKKKHEKL--DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
K+ TTK KK K D PK+P +AFF F+E+FR+ +++++P KS+ A+GKA G+KW
Sbjct: 19 KKSTTKAGKKSGKAAKDPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKW 78
Query: 107 KTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENG 142
K+++ EK Y D A +++ E+++ M Y KR+ G
Sbjct: 79 KSLSEAEKRPYVDKAEKRKVEYEKNMKAYNKRQAEG 114
>gi|351725417|ref|NP_001235556.1| uncharacterized protein LOC100305961 [Glycine max]
gi|255627113|gb|ACU13901.1| unknown [Glycine max]
Length = 169
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AF FLE+FRK F+ +NP +K++ +GKA GEKWK+++ EK Y A
Sbjct: 49 DPNKPKRPPSAFLVFLEEFRKTFKAENPLVKAVSVVGKAGGEKWKSLSSAEKAPYEAKAA 108
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFD 154
+++AE+++ + Y K++ +S +D E D
Sbjct: 109 KRKAEYEKLIKAYEKKQ-----ASSADDDESD 135
>gi|13877775|gb|AAK43965.1|AF370150_1 putative HMG protein [Arabidopsis thaliana]
Length = 138
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 10/115 (8%)
Query: 49 KRVTTKLKK--KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
+R+ T+ +K K K D PK+PP+AFF FLEDFRK F NP+ KS+ +GKA G +W
Sbjct: 15 QRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARW 74
Query: 107 KTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEED------SEFDE 155
K MT E+K Y A + E+ + + Y + +G N EED SE DE
Sbjct: 75 KAMTDEDKAPYVAKAESIKTEYIKNVQQYNLKLASGT--NREEDDSDKSKSEVDE 127
>gi|255544145|ref|XP_002513135.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223548146|gb|EEF49638.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 196
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 9/77 (11%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRA 131
TAFF FL++FRK F+E NPD K ++ + K GEKWK MT EEK Y D ATE +AE+D+A
Sbjct: 105 TAFFIFLDEFRKTFKEANPDSKDVKRVAKEAGEKWKAMTDEEKKPYADKATELKAEYDKA 164
Query: 132 MADYIKRKENGKVENSE 148
+ G+V N+E
Sbjct: 165 L---------GEVNNAE 172
>gi|351725757|ref|NP_001235312.1| uncharacterized protein LOC100499992 [Glycine max]
gi|255628371|gb|ACU14530.1| unknown [Glycine max]
Length = 139
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+ +FR+ F++++P+ KS+ +GKA GEKWK+++ EK + A
Sbjct: 33 DPNKPKRPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGEKWKSLSDAEKAPFVATAE 92
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEED 150
+K+ E+++ ++ Y K+ E +NSEED
Sbjct: 93 KKKQEYEKTISAYNKQLEG---KNSEED 117
>gi|125583208|gb|EAZ24139.1| hypothetical protein OsJ_07880 [Oryza sativa Japonica Group]
Length = 170
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 53/75 (70%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE 123
S PK+PP+AFF F+ +FR+ +Q +PD KS+ A+ KA GEKW+ M+ +EK Y D A +
Sbjct: 55 SGKPKRPPSAFFVFMSEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQEKAPYVDKAGQ 114
Query: 124 KRAEFDRAMADYIKR 138
K+ ++++ A++ K+
Sbjct: 115 KKQDYEKTKANFDKK 129
>gi|148250187|gb|ABQ53545.1| HMG1 protein [Arachis diogoi]
Length = 141
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 58/90 (64%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK F + +P+ K++ A+GKA G KWK M+ EK Y +
Sbjct: 29 DPNKPKRPPSAFFVFMEEFRKQFNKDHPENKAVSAVGKAAGAKWKQMSDAEKAPYVAKSE 88
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSE 152
+++ ++++ M Y K++ G EE+S+
Sbjct: 89 KRKQDYEKNMRAYNKKQAEGPTGGDEEESD 118
>gi|449456873|ref|XP_004146173.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449495123|ref|XP_004159740.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis sativus]
Length = 146
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 56/76 (73%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+E+FRK +++++P+ KS+ A+GKA G+KWK+M+ EK Y + A
Sbjct: 34 DPNKPKRPASAFFVFMEEFRKQYKKEHPNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAE 93
Query: 123 EKRAEFDRAMADYIKR 138
+++ E++++M Y KR
Sbjct: 94 KRKTEYNKSMQAYNKR 109
>gi|326525246|dbj|BAK07893.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
K+PPTAFF F++DFR F+ +PD K + A+GKA GEKW++MT EEK Y D A E +A+
Sbjct: 102 KRPPTAFFLFMKDFRVEFKTSHPDEKGVAAVGKAAGEKWRSMTEEEKKPYNDQAKELKAQ 161
Query: 128 FD 129
D
Sbjct: 162 LD 163
>gi|225457566|ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
gi|359491843|ref|XP_003634333.1| PREDICTED: high mobility group-like isoform 2 [Vitis vinifera]
gi|297745562|emb|CBI40727.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+E+FRK ++E++P KS+ +GKA G+KWK+M+ EK Y A
Sbjct: 40 DPNKPKRPASAFFVFMEEFRKQYKEKHPSNKSVSVVGKAGGDKWKSMSEAEKAPYVAKAE 99
Query: 123 EKRAEFDRAMADYIKRKENG-KVENSEEDSE 152
+++ E+++ M Y K++ G KV E++SE
Sbjct: 100 KRKVEYEKNMKAYNKKQAEGTKVVEEEDESE 130
>gi|397396|emb|CAA46876.1| DNA-binding protein [Zea mays]
Length = 168
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 53/75 (70%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF F+E+FRK F+E+NP KS+ A+GKA G++WK+++ +K Y A
Sbjct: 48 DPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKAN 107
Query: 123 EKRAEFDRAMADYIK 137
+ + E+++A+A Y K
Sbjct: 108 KLKLEYNKAIAAYNK 122
>gi|293335943|ref|NP_001167650.1| high mobility group protein1 [Zea mays]
gi|123378|sp|P27347.1|MNB1B_MAIZE RecName: Full=DNA-binding protein MNB1B; AltName: Full=HMG1-like
protein
gi|22329|emb|CAA41220.1| high mobility group protein [Zea mays]
gi|5441502|emb|CAB46752.1| HMGa protein [Zea mays]
gi|22347617|gb|AAM95942.1| nucleosome/chromatin assembly factor group D protein [Zea mays]
gi|194701148|gb|ACF84658.1| unknown [Zea mays]
gi|194702316|gb|ACF85242.1| unknown [Zea mays]
gi|194703290|gb|ACF85729.1| unknown [Zea mays]
gi|195606194|gb|ACG24927.1| DNA-binding protein MNB1B [Zea mays]
gi|195612638|gb|ACG28149.1| DNA-binding protein MNB1B [Zea mays]
gi|195618138|gb|ACG30899.1| DNA-binding protein MNB1B [Zea mays]
gi|195618904|gb|ACG31282.1| DNA-binding protein MNB1B [Zea mays]
gi|195619012|gb|ACG31336.1| DNA-binding protein MNB1B [Zea mays]
gi|195619124|gb|ACG31392.1| DNA-binding protein MNB1B [Zea mays]
gi|195638824|gb|ACG38880.1| DNA-binding protein MNB1B [Zea mays]
gi|195642004|gb|ACG40470.1| DNA-binding protein MNB1B [Zea mays]
gi|223972731|gb|ACN30553.1| unknown [Zea mays]
gi|223972797|gb|ACN30586.1| unknown [Zea mays]
gi|223973279|gb|ACN30827.1| unknown [Zea mays]
gi|223974975|gb|ACN31675.1| unknown [Zea mays]
gi|413935043|gb|AFW69594.1| high mobility group protein1 [Zea mays]
Length = 157
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 53/75 (70%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF F+E+FRK F+E+NP KS+ A+GKA G++WK+++ +K Y A
Sbjct: 37 DPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKAN 96
Query: 123 EKRAEFDRAMADYIK 137
+ + E+++A+A Y K
Sbjct: 97 KLKLEYNKAIAAYNK 111
>gi|729736|sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein
Length = 144
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 54/77 (70%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+EDFRK ++E++P+ KS+ +GKA G+KWK +T EK + A
Sbjct: 32 DPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAE 91
Query: 123 EKRAEFDRAMADYIKRK 139
+++ E+++ + Y K++
Sbjct: 92 KRKQEYEKNLQAYNKKQ 108
>gi|218198917|gb|EEC81344.1| hypothetical protein OsI_24530 [Oryza sativa Indica Group]
Length = 163
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 58/89 (65%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
KS A++ K +K D PK+ P+AFF F+E+FRK F+E+NP KS+ A+GKA G
Sbjct: 19 KSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAG 78
Query: 104 EKWKTMTYEEKVKYYDIATEKRAEFDRAM 132
++WK++T +K Y A + +AE++R +
Sbjct: 79 DRWKSLTEADKAPYVAKANKLKAEYNRPL 107
>gi|162460809|ref|NP_001105483.1| high mobility group protein3 [Zea mays]
gi|1845197|emb|CAA69606.1| HMGc2 [Zea mays]
gi|223947405|gb|ACN27786.1| unknown [Zea mays]
gi|413923414|gb|AFW63346.1| HMGc2 protein [Zea mays]
Length = 138
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 58/87 (66%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE 123
S PK+PP+AFF F+ +FR+ +Q Q+P KS+ A+ KA GEKW++M+ +EK Y D A +
Sbjct: 31 SGKPKRPPSAFFVFMSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQ 90
Query: 124 KRAEFDRAMADYIKRKENGKVENSEED 150
K+ ++++ A+ K + K + ++D
Sbjct: 91 KKQDYEKTKANIEKSTSSKKAKTDDDD 117
>gi|115480551|ref|NP_001063869.1| Os09g0551600 [Oryza sativa Japonica Group]
gi|50726318|dbj|BAD33893.1| putative HMGd1 [Oryza sativa Japonica Group]
gi|113632102|dbj|BAF25783.1| Os09g0551600 [Oryza sativa Japonica Group]
gi|213959176|gb|ACJ54922.1| HMG type nucleosome/chromatin assembly factor [Oryza sativa
Japonica Group]
gi|215694881|dbj|BAG90072.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 127
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 56/88 (63%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E FRK ++E++P++K + IGKA G+KWK+MT +K + A
Sbjct: 24 DPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDADKAPFVTKAE 83
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEED 150
+ +AE+ + + Y ++ G + + D
Sbjct: 84 KLKAEYTKKIDAYNNKQAGGPATSGDSD 111
>gi|18419623|gb|AAL69379.1|AF462216_1 HMG-domain containing protein [Narcissus pseudonarcissus]
Length = 106
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK F+E+NP+ K + +GKA G+KWK+M+ EK Y A
Sbjct: 42 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAA 101
Query: 123 EKRAE 127
+++AE
Sbjct: 102 KRKAE 106
>gi|357159916|ref|XP_003578598.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 128
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K K EK D PK+PP+AFF F+E FRK ++E++PD+K + +GKA G +WK+++ EK
Sbjct: 18 KTKAEK-DPNQPKRPPSAFFVFMEGFRKDYKEKHPDVKQVSVVGKAGGAEWKSLSDAEKA 76
Query: 116 KYYDIATEKRAEFDRAMADYIKRKENGKVENSEED 150
+ A + +AE+++ M Y + G+ + + D
Sbjct: 77 PFVAKAEKLKAEYNKKMVAYNNPQAGGQEASGDSD 111
>gi|18700443|dbj|BAB85204.1| high mobility group box protein 2 [Oryza sativa Japonica Group]
gi|125540625|gb|EAY87020.1| hypothetical protein OsI_08417 [Oryza sativa Indica Group]
Length = 145
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 65/102 (63%), Gaps = 6/102 (5%)
Query: 43 GKSISAKRVTTKLK------KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMR 96
GK+ ++K+ +LK K+ + S PK+PP+AFF F+ +FR+ +Q +P KS+
Sbjct: 3 GKADASKKGEGRLKAAGGAGKRKKAAASGKPKRPPSAFFVFMSEFRQEYQAAHPGNKSVA 62
Query: 97 AIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKR 138
A+ KA GEKW+ M+ +EK Y D A +K+ ++++ A++ K+
Sbjct: 63 AVSKAAGEKWRAMSEQEKAPYVDKAGQKKQDYEKTKANFDKK 104
>gi|359476975|ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-like isoform 2 [Vitis
vinifera]
Length = 125
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 35 AAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKS 94
A + ++K+G + K+ KK+ D PK+P +AFF F+E+FRK ++E++P KS
Sbjct: 18 ARLSVKKKGAAAVGKKTA---KKEKAVKDPNKPKRPASAFFVFMEEFRKQYKEKHPANKS 74
Query: 95 MRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKE 140
+ +GKA G+KWK+++ EK Y A +++ E++++M Y KR E
Sbjct: 75 VSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRME 120
>gi|357144307|ref|XP_003573245.1| PREDICTED: high mobility group B protein 7-like [Brachypodium
distachyon]
Length = 218
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 44/62 (70%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
K+PPTAFF F++DFR F+ +PD K + A+GKA G KWK MT EEK Y D A E +A+
Sbjct: 102 KRPPTAFFIFMKDFRLEFKASHPDEKGVSAVGKAAGVKWKAMTDEEKKPYLDQAKELKAK 161
Query: 128 FD 129
FD
Sbjct: 162 FD 163
>gi|414590133|tpg|DAA40704.1| TPA: hypothetical protein ZEAMMB73_374315 [Zea mays]
Length = 140
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
Query: 35 AAVGIEKEGKSISA---KRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPD 91
+VG+E + ++ S R++ + K K EK D PK+PPTAFF F+E+FRK ++E++P+
Sbjct: 15 GSVGLEMKSRARSGGGDSRLSVR-KTKVEK-DPNKPKRPPTAFFVFMEEFRKDYKEKHPN 72
Query: 92 IKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENG 142
+K + IGKA G+ WK+++ EK Y A + + E+ + M Y ++ G
Sbjct: 73 VKQVSVIGKAGGDMWKSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQSGG 123
>gi|449468356|ref|XP_004151887.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449517965|ref|XP_004166014.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
Length = 142
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 52 TTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTY 111
+TK KKK D PK+P T FF F+E+FRK ++EQ PD K+ +GK GEKWK+M+
Sbjct: 28 STKSKKK----DQNAPKRPATTFFVFMEEFRKTYKEQFPDAKAGPVVGKVGGEKWKSMSD 83
Query: 112 EEKVKYYDIATEKRAEFDRAMADY 135
EK Y + A +++AE++ A+ Y
Sbjct: 84 AEKAPYAEKALKRKAEYEIALEAY 107
>gi|194700664|gb|ACF84416.1| unknown [Zea mays]
gi|194701704|gb|ACF84936.1| unknown [Zea mays]
gi|413923412|gb|AFW63344.1| hypothetical protein ZEAMMB73_127996 [Zea mays]
gi|413923413|gb|AFW63345.1| hypothetical protein ZEAMMB73_127996 [Zea mays]
Length = 139
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 58/87 (66%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE 123
S PK+PP+AFF F+ +FR+ +Q Q+P KS+ A+ KA GEKW++M+ +EK Y D A +
Sbjct: 31 SGKPKRPPSAFFVFMSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQ 90
Query: 124 KRAEFDRAMADYIKRKENGKVENSEED 150
K+ ++++ A+ K + K +++D
Sbjct: 91 KKQDYEKTKANIEKESTSSKKAKTDDD 117
>gi|22135473|gb|AAM93217.1|AF527616_1 nucleasome/chromatin assembly factor D protein NFD101 [Zea mays]
gi|2196672|emb|CAA70045.1| HMGd1 [Zea mays]
gi|194698578|gb|ACF83373.1| unknown [Zea mays]
gi|414886616|tpg|DAA62630.1| TPA: HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 12/104 (11%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK ++E++P++K + IGKA G+KWK+++ EK Y A
Sbjct: 24 DPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKAPYVSKAE 83
Query: 123 EKRAEFDRAMADYIKRKENG-----------KVENSEEDSEFDE 155
+ +AE+ + + D K++G K E ++ED E DE
Sbjct: 84 KLKAEYTKKI-DAYNNKQSGDPTASGDSDKSKSEVNDEDEEGDE 126
>gi|414886617|tpg|DAA62631.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 119
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK ++E++P++K + IGKA G+KWK+++ EK Y A
Sbjct: 24 DPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKAPYVSKAE 83
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEED---SEFDE 155
+ +AE+ + + Y ++ + + D SE DE
Sbjct: 84 KLKAEYTKKIDAYNNKQSGDPTASGDSDKSKSEGDE 119
>gi|414590134|tpg|DAA40705.1| TPA: hypothetical protein ZEAMMB73_374315 [Zea mays]
Length = 120
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PPTAFF F+E+FRK ++E++P++K + IGKA G+ WK+++ EK Y A
Sbjct: 24 DPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMWKSLSDAEKAPYVSKAE 83
Query: 123 EKRAEFDRAMADYIKRKENG 142
+ + E+ + M Y ++ G
Sbjct: 84 KLKVEYTKKMDAYNNKQSGG 103
>gi|238013344|gb|ACR37707.1| unknown [Zea mays]
gi|414590135|tpg|DAA40706.1| TPA: HMG1/2-like protein [Zea mays]
Length = 127
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PPTAFF F+E+FRK ++E++P++K + IGKA G+ WK+++ EK Y A
Sbjct: 24 DPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMWKSLSDAEKAPYVSKAE 83
Query: 123 EKRAEFDRAMADYIKRKENG 142
+ + E+ + M Y ++ G
Sbjct: 84 KLKVEYTKKMDAYNNKQSGG 103
>gi|162459697|ref|NP_001105649.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays]
gi|17017392|gb|AAL33650.1|AF440221_1 HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 12/104 (11%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK ++E++P++K + IGKA G+KWK+++ EK Y A
Sbjct: 24 DPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSLIGKAGGDKWKSLSDAEKAPYVSKAE 83
Query: 123 EKRAEFDRAMADYIKRKENG-----------KVENSEEDSEFDE 155
+ +AE+ + + D K++G K E ++ED E DE
Sbjct: 84 KLKAEYTKKI-DAYNNKQSGDPTASGDSDKSKSEVNDEDEEGDE 126
>gi|351723773|ref|NP_001235499.1| uncharacterized protein LOC100305957 [Glycine max]
gi|255627099|gb|ACU13894.1| unknown [Glycine max]
Length = 142
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK PP+AFF F+ +FR+ F++++P+ KS+ +GKA G+KWK+++ EK + A
Sbjct: 33 DPNKPKGPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGDKWKSLSDAEKAPFVATAE 92
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEED 150
+K+ E+++ + Y K+ E +NSEED
Sbjct: 93 KKKQEYEKTILAYNKKLEG---KNSEED 117
>gi|729738|sp|P40621.1|HMGL_WHEAT RecName: Full=HMG1/2-like protein
gi|21803|emb|CAA77641.1| high mobility group protein [Triticum aestivum]
gi|114145392|dbj|BAF30985.1| high mobility globular protein [Triticum aestivum]
Length = 161
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF F+ +FR+ F+++NP KS+ A+GKA GE+WK+++ EK Y A
Sbjct: 38 DPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKAN 97
Query: 123 EKRAEFDRAMADYIK 137
+ + E+++A+A Y K
Sbjct: 98 KLKGEYNKAIAAYNK 112
>gi|414886615|tpg|DAA62629.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 123
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 51/73 (69%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK ++E++P++K + IGKA G+KWK+++ EK Y A
Sbjct: 24 DPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKAPYVSKAE 83
Query: 123 EKRAEFDRAMADY 135
+ +AE+ + + Y
Sbjct: 84 KLKAEYTKKIDAY 96
>gi|414886614|tpg|DAA62628.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 118
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 51/73 (69%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+E+FRK ++E++P++K + IGKA G+KWK+++ EK Y A
Sbjct: 24 DPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKAPYVSKAE 83
Query: 123 EKRAEFDRAMADY 135
+ +AE+ + + Y
Sbjct: 84 KLKAEYTKKIDAY 96
>gi|346467547|gb|AEO33618.1| hypothetical protein [Amblyomma maculatum]
Length = 146
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
Query: 47 SAKRVTTKLKKKHEKL----DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKAC 102
SAK TKL K K D PK+ P+AFF FL++FRK F+E+NP+ KS+ A+ KA
Sbjct: 18 SAKAADTKLAVKKGKTKAAKDPNKPKRAPSAFFVFLDEFRKEFKEKNPENKSVAAVTKAG 77
Query: 103 GEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
G +WK+M+ +K Y A + + E+ + + Y E G+ E+++E DE
Sbjct: 78 GARWKSMSDADKEPYVSKADKLKVEYQKKVKAY----EKGQAHEPEDNAEMDE 126
>gi|950053|emb|CAA90679.1| HMG1/2-like protein [Hordeum vulgare subsp. vulgare]
Length = 160
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF F+ +FR+ F+++NP KS+ A+GKA GE+WK+++ EK + A
Sbjct: 38 DPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPFVAKAN 97
Query: 123 EKRAEFDRAMADYIK 137
+ + E+++A+A Y K
Sbjct: 98 KLKGEYNKAIASYNK 112
>gi|346472777|gb|AEO36233.1| hypothetical protein [Amblyomma maculatum]
Length = 208
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+ PTAFF F++DFRK ++E +PD KS+ ++ K GE+W++MT EEK Y D A E +A
Sbjct: 104 PKRAPTAFFLFMDDFRKEYKELHPDNKSVASVAKEGGERWRSMTIEEKKPYTDRAAELKA 163
Query: 127 EF 128
E+
Sbjct: 164 EY 165
>gi|194466165|gb|ACF74313.1| high mobility group protein 2 [Arachis hypogaea]
Length = 153
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 56/85 (65%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
K+PP+AFF F+E+FRK F + +P+ K++ A+GKA G KWK M+ EK Y + +++ +
Sbjct: 46 KRPPSAFFVFMEEFRKQFNKDHPENKAVSAVGKAAGAKWKQMSDAEKAPYVAKSEKRKQD 105
Query: 128 FDRAMADYIKRKENGKVENSEEDSE 152
+++ M Y K++ G EE+S+
Sbjct: 106 YEKNMRAYNKKQAEGPTGGDEEESD 130
>gi|413935042|gb|AFW69593.1| high mobility group protein1 [Zea mays]
Length = 220
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 52/73 (71%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF F+E+FRK F+E+NP KS+ A+GKA G++WK+++ +K Y A
Sbjct: 37 DPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKAN 96
Query: 123 EKRAEFDRAMADY 135
+ + E+++A+A Y
Sbjct: 97 KLKLEYNKAIAAY 109
>gi|226505018|ref|NP_001151148.1| LOC100284781 [Zea mays]
gi|195644628|gb|ACG41782.1| HMG1/2-like protein [Zea mays]
Length = 127
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PPT FF F+E+FRK ++E++P++K + IGKA G+ WK+++ EK Y A
Sbjct: 24 DPNKPKRPPTTFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMWKSLSDAEKAPYVSKAE 83
Query: 123 EKRAEFDRAMADYIKRKENG 142
+ + E+ + M Y ++ G
Sbjct: 84 KLKVEYTKKMDAYNNKQSGG 103
>gi|125559825|gb|EAZ05273.1| hypothetical protein OsI_27476 [Oryza sativa Indica Group]
gi|125559834|gb|EAZ05282.1| hypothetical protein OsI_27485 [Oryza sativa Indica Group]
Length = 204
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE 123
+K K+PPTAFF F+ DFRK ++ ++PD KS+ A+ K GE+WK+M+ E+K Y D A E
Sbjct: 89 AKKGKRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAE 148
Query: 124 KRAEF 128
+AE+
Sbjct: 149 LKAEY 153
>gi|308569660|gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirsutum]
Length = 142
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+E+FR+ +++ +P KS+ A+GKA G+KWK+++ EK Y A
Sbjct: 31 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSLSEAEKAPYVAKAE 90
Query: 123 EKRAEFDRAMADYIKRKENG-KVENSEEDSEFDE 155
+++ E+++ M Y KR+ G K E+ E D E
Sbjct: 91 KRKVEYEKNMKAYNKRQAEGPKDEDVESDKSVSE 124
>gi|357640485|gb|AET87126.1| high mobility group B2 protein [Brassica napus]
Length = 145
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 53/76 (69%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+EDFR+ +++ +P+ KS+ A+GKA GEKWK+++ EK + A
Sbjct: 34 DPNKPKRPASAFFVFMEDFRQTYKKDHPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKAD 93
Query: 123 EKRAEFDRAMADYIKR 138
+++ E+++ M Y K+
Sbjct: 94 KRKVEYEKTMKAYNKK 109
>gi|308569658|gb|ADO34794.1| high mobility group box 4 protein [Gossypium hirsutum]
Length = 148
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 54/77 (70%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+E+FR+ +++++P KS+ A+GKA GEKWK+++ EK Y A
Sbjct: 35 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGEKWKSLSDAEKAPYIAKAE 94
Query: 123 EKRAEFDRAMADYIKRK 139
+++ E+++ M Y KR+
Sbjct: 95 KRKVEYEKNMKAYTKRQ 111
>gi|449521910|ref|XP_004167972.1| PREDICTED: high mobility group B protein 1-like [Cucumis sativus]
Length = 112
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 45/60 (75%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+PP+AFF FLE+FRK ++ +NP++K++ A+GKA GEKWK++++ + Y I
Sbjct: 49 KKDPNKPKRPPSAFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAVSIVVYYI 108
>gi|79318295|ref|NP_001031075.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|332191889|gb|AEE30010.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 147
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 52/76 (68%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+EDFR ++E++P KS+ A+GKA GEKWK+++ EK Y A
Sbjct: 31 DPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKAD 90
Query: 123 EKRAEFDRAMADYIKR 138
+++ E+++ M Y K+
Sbjct: 91 KRKVEYEKNMKAYNKK 106
>gi|115474323|ref|NP_001060758.1| Os08g0101100 [Oryza sativa Japonica Group]
gi|38637289|dbj|BAD03552.1| putative HMG type nucleosome/chromatin assembly factor D [Oryza
sativa Japonica Group]
gi|113622727|dbj|BAF22672.1| Os08g0101100 [Oryza sativa Japonica Group]
gi|125601889|gb|EAZ41214.1| hypothetical protein OsJ_25719 [Oryza sativa Japonica Group]
gi|213959174|gb|ACJ54921.1| HMG type nucleosome/chromatin assembly factor [Oryza sativa
Japonica Group]
gi|215697671|dbj|BAG91665.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE 123
+K K+PPTAFF F+ DFRK ++ ++PD KS+ A+ K GE+WK+M+ E+K Y D A E
Sbjct: 89 AKKGKRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAE 148
Query: 124 KRAEF 128
+AE+
Sbjct: 149 LKAEY 153
>gi|1813329|dbj|BAA19156.1| HMG-1 [Canavalia gladiata]
Length = 141
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+ +FR+ +++++P KS+ +GKA G+KWK+++ EK + A
Sbjct: 33 DPNKPKRPPSAFFVFMSEFREQYKKEHPTNKSVAVVGKAGGDKWKSLSDAEKAPFVARAE 92
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSE 152
+K+ E+D+++ Y RK GK + EE S+
Sbjct: 93 KKKEEYDKSILAY-NRKLEGKNPSEEEKSD 121
>gi|295913113|gb|ADG57819.1| transcription factor [Lycoris longituba]
Length = 108
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +AFF F+E FRK F+E+NP KS+ A+GKA GEKWK+M+ EK + A
Sbjct: 36 DPNKPKRAASAFFVFMEGFRKEFKEKNPKNKSVAAVGKAGGEKWKSMSDAEKAPFVKKAE 95
Query: 123 EKRAEFDRAMADY 135
+ +AE+++ M Y
Sbjct: 96 KLKAEYEKKMVAY 108
>gi|195619220|gb|ACG31440.1| HMG1/2-like protein [Zea mays]
Length = 139
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE 123
S PK+PP+AFF F+ +FR+ +Q +P KS+ + KA GEKW+ M+ +EK Y D A +
Sbjct: 30 SGKPKRPPSAFFVFMSEFRQQYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQ 89
Query: 124 KRAEFDRAMADYIKR 138
K+ ++++ A++ K+
Sbjct: 90 KKQDYEKTKANFDKK 104
>gi|1845195|emb|CAA69605.1| HMGc1 [Zea mays]
gi|5441504|emb|CAB46753.1| HMGc1 protein [Zea mays]
gi|194690322|gb|ACF79245.1| unknown [Zea mays]
gi|194704052|gb|ACF86110.1| unknown [Zea mays]
gi|219885481|gb|ACL53115.1| unknown [Zea mays]
gi|413938184|gb|AFW72735.1| HMG-like nucleosome/chromatin assembly factor D isoform 1 [Zea
mays]
gi|413938185|gb|AFW72736.1| HMG-like nucleosome/chromatin assembly factor D isoform 2 [Zea
mays]
Length = 139
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE 123
S PK+PP+AFF F+ +FR+ +Q +P KS+ + KA GEKW+ M+ +EK Y D A +
Sbjct: 30 SGKPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQ 89
Query: 124 KRAEFDRAMADYIKR 138
K+ ++++ A++ K+
Sbjct: 90 KKQDYEKTKANFDKK 104
>gi|162461550|ref|NP_001105075.1| high mobility group box protein2 [Zea mays]
gi|17017394|gb|AAL33651.1|AF440222_1 HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 139
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE 123
S PK+PP+AFF F+ +FR+ +Q +P KS+ + KA GEKW+ M+ +EK Y D A +
Sbjct: 30 SGKPKRPPSAFFAFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQ 89
Query: 124 KRAEFDRAMADYIKR 138
K+ ++++ A++ K+
Sbjct: 90 KKQDYEKTKANFDKK 104
>gi|224065681|ref|XP_002301918.1| high mobility group family [Populus trichocarpa]
gi|222843644|gb|EEE81191.1| high mobility group family [Populus trichocarpa]
Length = 152
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 54/80 (67%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+E+FR+ +++++P KS+ A+GKA G+KWK+++ EK Y A
Sbjct: 39 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKAD 98
Query: 123 EKRAEFDRAMADYIKRKENG 142
+++ E+++ M Y K + G
Sbjct: 99 KRKVEYEKKMKAYNKEQAEG 118
>gi|346467231|gb|AEO33460.1| hypothetical protein [Amblyomma maculatum]
Length = 115
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PPT FF F+E FRK ++E +P KS+ +GKA GEKWK+++ EK + A
Sbjct: 8 DPNKPKRPPTGFFVFMEGFRKQYKEAHPKNKSVAVVGKAGGEKWKSLSESEKAVFLSKAE 67
Query: 123 EKRAEFDRAMADYIK 137
+ R+E+ + + Y K
Sbjct: 68 KLRSEYQKKIDAYEK 82
>gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa]
Length = 151
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 54/80 (67%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+E+FR+ +++++P KS+ A+GKA G+KWK+++ EK Y A
Sbjct: 39 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKAD 98
Query: 123 EKRAEFDRAMADYIKRKENG 142
+++ E+++ M Y K + G
Sbjct: 99 KRKVEYEKKMKAYNKEQAEG 118
>gi|304651500|gb|ADM47612.1| high mobility group protein [Hevea brasiliensis]
Length = 146
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 54/80 (67%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+E+FR+ +++++P KS+ A+GKA G+KWK+++ EK Y A
Sbjct: 35 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSEAEKAPYVAKAE 94
Query: 123 EKRAEFDRAMADYIKRKENG 142
+++ E+++ + Y K + G
Sbjct: 95 KRKVEYEKKLKAYNKGQAEG 114
>gi|125564627|gb|EAZ10007.1| hypothetical protein OsI_32309 [Oryza sativa Indica Group]
Length = 139
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 13/107 (12%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT----- 110
K K EK D PK+PP+AFF F+E FRK ++E++P++K + IGKA G+KWK+MT
Sbjct: 18 KTKAEK-DPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDAIGG 76
Query: 111 -------YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEED 150
++K + A + +AE+ + + Y ++ G + + D
Sbjct: 77 YVVVAVPCKDKAPFVTKAEKLKAEYTKKIDAYNNKQAGGPATSGDSD 123
>gi|357508231|ref|XP_003624404.1| High mobility group protein [Medicago truncatula]
gi|355499419|gb|AES80622.1| High mobility group protein [Medicago truncatula]
Length = 144
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 55 LKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEK 114
+ +K K D PK+P + FF F+ DFR F+++NPD K + +GKA GEKW++M+ ++K
Sbjct: 1 MARKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMS-DDK 59
Query: 115 VKYYDIATEKRAEFDRAMADYIKR 138
Y A +K+ E+ +A+ Y K+
Sbjct: 60 APYVADAEKKKMEYVKAIHAYNKK 83
>gi|222642048|gb|EEE70180.1| hypothetical protein OsJ_30257 [Oryza sativa Japonica Group]
Length = 139
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 12/108 (11%)
Query: 55 LKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT---- 110
++K + D PK+PP+AFF F+E FRK ++E++P++K + IGKA G+KWK+MT
Sbjct: 16 VRKTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDAIR 75
Query: 111 --------YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEED 150
++K + A + +AE+ + + Y ++ G + + D
Sbjct: 76 GYVVVAVPCKDKAPFVTKAEKLKAEYTKKIDAYNNKQAGGPATSGDSD 123
>gi|255539248|ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223551390|gb|EEF52876.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 145
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 60/98 (61%)
Query: 45 SISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGE 104
S++ K V K D PK+P +AFF F+E+FR+ +++++P KS+ A+GKA G+
Sbjct: 16 SVNKKPVKATKKAGKAAKDPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGD 75
Query: 105 KWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENG 142
+WK+M+ EK + A +++ E+++ + Y K + G
Sbjct: 76 RWKSMSESEKAPFVAKAEKRKIEYEKKLKAYNKGQAEG 113
>gi|297736623|emb|CBI25494.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 41/48 (85%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
D PK+PP+AFF FLE+FRK +++++P++K++ A+GKA GEKWK+++
Sbjct: 76 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLS 123
>gi|195618458|gb|ACG31059.1| HMG1/2-like protein [Zea mays]
gi|195640852|gb|ACG39894.1| HMG1/2-like protein [Zea mays]
gi|223975443|gb|ACN31909.1| unknown [Zea mays]
gi|413925109|gb|AFW65041.1| HMG type nucleosome/chromatin assembly factor DNucleasome/chromatin
assembly factor D protein NFD106 [Zea mays]
Length = 212
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
K+ PTAFF F++DFRK F+ +PD KS+ + K GE+WK+MT EEK Y + A E +AE
Sbjct: 93 KRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELKAE 152
>gi|194466163|gb|ACF74312.1| high mobility group protein 1 [Arachis hypogaea]
Length = 139
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F+ +FR+ +++++P+ KS+ +GKA G++WK+M+ +K Y A
Sbjct: 32 DPNKPKRPPSAFFVFMSEFREQYKKEHPNNKSVAVVGKAGGDRWKSMSDADKAPYQAKAE 91
Query: 123 EKRAEFDRAMADYIKRKEN-GKVENSEED 150
+K+ E++R M Y K++E+ G E E D
Sbjct: 92 KKKEEYERTMQAYNKKQESKGASEEDESD 120
>gi|162462896|ref|NP_001105076.1| nucleosome/chromatin assembly factor D [Zea mays]
gi|17017396|gb|AAL33652.1|AF440223_1 HMG type nucleosome/chromatin assembly factor D [Zea mays]
gi|22135475|gb|AAM93218.1|AF527617_1 nucleasome/chromatin assembly factor D protein NFD106 [Zea mays]
Length = 154
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
K+ PTAFF F++DFRK F+ +PD KS+ + K GE+WK+MT EEK Y + A E +AE
Sbjct: 35 KRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELKAE 94
>gi|242080163|ref|XP_002444850.1| hypothetical protein SORBIDRAFT_07g000230 [Sorghum bicolor]
gi|241941200|gb|EES14345.1| hypothetical protein SORBIDRAFT_07g000230 [Sorghum bicolor]
Length = 221
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
K+ PTAFF F++DFRK F+ +PD KS+ + K GEKWK+MT EEK Y + A E +A+
Sbjct: 98 KRSPTAFFLFMDDFRKEFKAAHPDNKSVATVAKEGGEKWKSMTDEEKKPYVEKAAELKAQ 157
>gi|224083306|ref|XP_002306980.1| high mobility group family [Populus trichocarpa]
gi|222856429|gb|EEE93976.1| high mobility group family [Populus trichocarpa]
Length = 160
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 53/80 (66%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F+E+FR+ ++ ++P KS+ A+GKA G+KWK+++ EK + A
Sbjct: 40 DPNKPKRPASAFFVFMEEFREQYKREHPKNKSVAAVGKAGGDKWKSLSEAEKAPFVAKAD 99
Query: 123 EKRAEFDRAMADYIKRKENG 142
+++ E+++ M Y K + G
Sbjct: 100 KRKVEYEKKMKAYNKEQLKG 119
>gi|359481661|ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
gi|147815135|emb|CAN74566.1| hypothetical protein VITISV_023651 [Vitis vinifera]
gi|297740214|emb|CBI30396.3| unnamed protein product [Vitis vinifera]
Length = 168
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 39/45 (86%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEE 113
+PP+AFF FLE+FRK F+++NP++K++ A+GKA GE+WK+++ E
Sbjct: 58 RPPSAFFVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAE 102
>gi|357484151|ref|XP_003612362.1| HMG1/2-like protein [Medicago truncatula]
gi|355513697|gb|AES95320.1| HMG1/2-like protein [Medicago truncatula]
Length = 140
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%)
Query: 49 KRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKT 108
K T K+ + D PK+PP+AFF F+ +FR+ F+++NP KS+ +GKA G++WK
Sbjct: 18 KGAGTGTKQSKKAKDPNKPKRPPSAFFVFMSEFRERFKKENPSNKSVAVVGKAGGKEWKA 77
Query: 109 MTYEEKVKYYDIATEKRAEFDRAMADY 135
++ +K + A + + E+++ M Y
Sbjct: 78 LSDADKAPFIAKADKLKEEYEKTMRAY 104
>gi|297798364|ref|XP_002867066.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312902|gb|EFH43325.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 125
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%)
Query: 74 FFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMA 133
FF FL+DFR+ F NPD KS+ ++GKA G+KWK+MT E+K + A K+ E+ M
Sbjct: 41 FFVFLDDFRREFNLANPDNKSVASVGKAAGKKWKSMTEEDKAPFVAKAKSKKTEYAATMQ 100
Query: 134 DYIKRKENG 142
Y NG
Sbjct: 101 QYNMELANG 109
>gi|293333310|ref|NP_001168929.1| uncharacterized protein LOC100382741 [Zea mays]
gi|223973791|gb|ACN31083.1| unknown [Zea mays]
Length = 204
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE 123
S PK+PP+AFF F+ +FR+ +Q +P KS+ + KA GEKW+ M+ +EK Y D A +
Sbjct: 30 SGKPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQ 89
Query: 124 KR 125
K+
Sbjct: 90 KK 91
>gi|357136925|ref|XP_003570053.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 144
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F+ +FR+ +Q ++P+ KS+ + KA GEKW++M+ +K Y + A +K+ ++
Sbjct: 36 RPPSAFFVFMSEFRQEYQAEHPNNKSVANVSKAAGEKWRSMSDADKAPYVEKAGQKKQDY 95
Query: 129 DRAMADYIKRKENGKVENSEEDSE 152
++ A + K++ + +D E
Sbjct: 96 EKTKATFDKKESTSSKKTKTQDDE 119
>gi|413935044|gb|AFW69595.1| high mobility group protein1 [Zea mays]
Length = 97
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
D PK+ P+AFF F+E+FRK F+E+NP KS+ A+GKA G++WK+++
Sbjct: 37 DPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLS 84
>gi|357165293|ref|XP_003580334.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 135
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
PK+ PT FF FL +FR + E++P+ K + A+ KA GEKW++M+ EEK KY
Sbjct: 27 PKRAPTPFFAFLAEFRPQYMEKHPEAKGVAAVTKAAGEKWRSMSDEEKAKY 77
>gi|66840992|emb|CAI64395.1| putative high mobility group protein [Triticum aestivum]
Length = 112
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
PK+ PT FF FL +FR + E++P+ K + A+ KA GEKW++M+ EEK KY
Sbjct: 23 PKRAPTPFFAFLAEFRPQYMEKHPEAKGVAAVTKAAGEKWRSMSDEEKAKY 73
>gi|297812491|ref|XP_002874129.1| hypothetical protein ARALYDRAFT_910356 [Arabidopsis lyrata subsp.
lyrata]
gi|297319966|gb|EFH50388.1| hypothetical protein ARALYDRAFT_910356 [Arabidopsis lyrata subsp.
lyrata]
Length = 193
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQ-EQNPDI-KSMRAIGKACGEKWKTMTYEEKVKYYDIA 121
S PK+P TAFF F+ DFRK F+ E N + K IG GEKWK++T EEK Y D A
Sbjct: 112 SNKPKRPLTAFFIFMNDFRKTFKTEHNGSLAKDAAKIG---GEKWKSLTEEEKKVYLDKA 168
Query: 122 TEKRAEFDRAM 132
E +AE+++++
Sbjct: 169 AELKAEYNKSL 179
>gi|18420676|ref|NP_568431.1| high-mobility group B6 protein [Arabidopsis thaliana]
gi|75245985|sp|Q8LDF9.1|HMGB7_ARATH RecName: Full=High mobility group B protein 7; AltName:
Full=Nucleosome/chromatin assembly factor group D 07;
Short=Nucleosome/chromatin assembly factor group D 7
gi|21554154|gb|AAM63233.1| unknown [Arabidopsis thaliana]
gi|26452394|dbj|BAC43282.1| unknown protein [Arabidopsis thaliana]
gi|332005781|gb|AED93164.1| high-mobility group B6 protein [Arabidopsis thaliana]
Length = 241
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQ-EQNPDI-KSMRAIGKACGEKWKTMTYEEKVKYYDIA 121
S PK+P TAFF F+ DFRK F+ E N + K IG GEKWK++T EEK Y D A
Sbjct: 112 SNKPKRPLTAFFIFMSDFRKTFKSEHNGSLAKDAAKIG---GEKWKSLTEEEKKVYLDKA 168
Query: 122 TEKRAEFDRAM 132
E +AE+++++
Sbjct: 169 AELKAEYNKSL 179
>gi|9759080|dbj|BAB09558.1| unnamed protein product [Arabidopsis thaliana]
Length = 226
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQ-EQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
S PK+P TAFF F+ DFRK F+ E N + + K GEKWK++T EEK Y D A
Sbjct: 97 SNKPKRPLTAFFIFMSDFRKTFKSEHNGSL--AKDAAKIGGEKWKSLTEEEKKVYLDKAA 154
Query: 123 EKRAEFDRAM 132
E +AE+++++
Sbjct: 155 ELKAEYNKSL 164
>gi|339716048|gb|AEJ88271.1| putative HMG DNA-binding protein [Wolffia arrhiza]
Length = 148
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF FLE+FRK ++E++PD KS+ A+GKA G KW++M+ +K Y + +
Sbjct: 37 DPNKPKRAPSAFFVFLEEFRKEYKEKHPDNKSVAAVGKAAGAKWRSMSDSDKAPYVNKSN 96
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSE 152
+++AE + A K++E +++DS+
Sbjct: 97 KRKAEVQKTAAVNAKKQETSSRAAADDDSD 126
>gi|145536343|ref|XP_001453899.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421632|emb|CAK86502.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ T +KK E+ D PKKP TAFF F + +R+ E+NP+IK + I + G KW +M+
Sbjct: 37 IPTTTEKKKER-DPNAPKKPLTAFFLFNQKYRQKVVERNPEIK-LTQISQMAGNKWTSMS 94
Query: 111 YEEKVKYYDIATEKRAEFDRAMADY 135
+EK Y D + ++D+ + DY
Sbjct: 95 EQEKKPYLDQYNAAKEKYDQELKDY 119
>gi|331220978|ref|XP_003323164.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309302154|gb|EFP78745.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 106
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 36 AVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSM 95
A ++ +G + KRV K EK D PK+P +A+ YF +D+R+ + +NPD+ S
Sbjct: 12 APKLDCDGNPVKTKRV------KKEK-DPNAPKRPLSAYMYFSQDWRERIKTENPDV-SF 63
Query: 96 RAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
IG+ G KWK ++ EEK Y D+A+ + + A+Y
Sbjct: 64 GEIGRLLGLKWKGLSEEEKKPYEDMASRDKKRHEAEKAEY 103
>gi|196005089|ref|XP_002112411.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
gi|190584452|gb|EDV24521.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
Length = 253
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 14 SSSASNLKMVLRKRPTRHSVVAAVGIEKEGKSISAK------------RVTTKLKKKHEK 61
+S LK R+ P H + G E + S K R ++ K +K
Sbjct: 74 TSLRQRLKKSGREMPKAHEIAKMCGSEWRAMTASQKKPYDELAARDKQRYMEEISKFRKK 133
Query: 62 LDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D PK+P TA+FYFL +FRK + + + + + GEKW+ MT EK KY +
Sbjct: 134 ADPDKPKRPQTAYFYFLAEFRKAMKAKG--VIEGKKLTSLSGEKWRAMTPAEKAKYEAMV 191
Query: 122 TEKRAEFDRAMADYIKRK 139
T+ + + R M Y K+K
Sbjct: 192 TKDKERYQREMDAYRKKK 209
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
KKP +A+ +F R+ ++ ++ I K CG +W+ MT +K Y ++A
Sbjct: 63 KKPKSAYIFFTTSLRQRLKKSGREMPKAHEIAKMCGSEWRAMTASQKKPYDELAA 117
>gi|356494961|ref|XP_003516349.1| PREDICTED: high mobility group B protein 7-like [Glycine max]
Length = 178
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGK 100
D MPK+PPT FF FL+DFRK F+E NPD K + +GK
Sbjct: 99 DPNMPKRPPTTFFVFLDDFRKSFKEANPDSKDAKRVGK 136
>gi|332017611|gb|EGI58308.1| Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit A [Acromyrmex echinatior]
Length = 1249
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 38 GIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA 97
G+++ + TK +KK + D+ P++P + +F FL D R+ + QNP + +
Sbjct: 49 GVKRSATATGNTPNRTKKRKKAPR-DATAPRQPLSGYFLFLNDRREKVRNQNPSL-TFTE 106
Query: 98 IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSEFDE 155
I K +W + ++K +Y D A + + ++R +DY K+ E ++ N ++ +E
Sbjct: 107 ITKLLAAEWSKLPIDQKQRYLDAAEQDKERYNREFSDY-KQTEAYRLFNEKQSERQNE 163
>gi|357484153|ref|XP_003612363.1| HMG1/2-like protein [Medicago truncatula]
gi|355513698|gb|AES95321.1| HMG1/2-like protein [Medicago truncatula]
Length = 94
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 36/48 (75%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
D PK+PP+AFF F+ +FR+ F+++NP KS+ +GKA G++WK ++
Sbjct: 32 DPNKPKRPPSAFFVFMSEFRERFKKENPSNKSVAVVGKAGGKEWKALS 79
>gi|357513707|ref|XP_003627142.1| HMG1/2-like protein [Medicago truncatula]
gi|355521164|gb|AET01618.1| HMG1/2-like protein [Medicago truncatula]
Length = 248
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 14 SSSASNLKMVLRKRPTRHSVVAAVGIEK-EGKSISAKRVTTKLKK--KHEKL-DSKMPKK 69
S+ A L+ L++ H+V A ++K E K ++K T K K K EK+ DS K+
Sbjct: 149 SAFAKCLEAKLKRNLDSHAVEQAAEVKKPERKKPNSKDPTAKRAKVGKREKVKDSNAAKR 208
Query: 70 PPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWK 107
PT FF F+++FRK F+E N D K ++ +GK GEKW+
Sbjct: 209 SPTDFFVFMDEFRKTFKEANLDSKDVKRVGKEDGEKWR 246
>gi|427793709|gb|JAA62306.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 640
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D+ PK+P TAF F+ DFRK + P+ + A+ K GE+W++M+ E+K Y +
Sbjct: 290 DANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSEEDKRPYVERQN 348
Query: 123 EKRAEFDRAMADYIKRKENGK 143
E++ ++++ M +Y ++++ +
Sbjct: 349 EEKMKYEQNMEEYRRKQQTAE 369
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 46 ISAKRVTTKLKKKHEKLDSK---MPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKAC 102
+ A VT KLK K K++ PK+ TA+ F + +R+ ++ I + GK C
Sbjct: 193 MGAAAVTGKLKHKKPKVNKDGVPAPKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKEC 252
Query: 103 GEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGK 143
KW TM+ E+K + A R + R MA Y ++ K
Sbjct: 253 AGKWNTMSDEDKQPFLSAAARDRERYKREMAVYKPARDANK 293
>gi|115459940|ref|NP_001053570.1| Os04g0564600 [Oryza sativa Japonica Group]
gi|38345400|emb|CAE03091.2| OSJNBa0017B10.6 [Oryza sativa Japonica Group]
gi|113565141|dbj|BAF15484.1| Os04g0564600 [Oryza sativa Japonica Group]
gi|116309704|emb|CAH66751.1| H0409D10.9 [Oryza sativa Indica Group]
gi|116309707|emb|CAH66753.1| OSIGBa0158F05.2 [Oryza sativa Indica Group]
gi|125549359|gb|EAY95181.1| hypothetical protein OsI_16998 [Oryza sativa Indica Group]
gi|149391231|gb|ABR25633.1| hmg1/2-like protein [Oryza sativa Indica Group]
gi|213959192|gb|ACJ54930.1| HMG protein [Oryza sativa Japonica Group]
gi|215767864|dbj|BAH00093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629376|gb|EEE61508.1| hypothetical protein OsJ_15798 [Oryza sativa Japonica Group]
gi|323388963|gb|ADX60286.1| HMG transcription factor [Oryza sativa Japonica Group]
Length = 132
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
PK+ T FF FL +FR + E++P+ K + A+ KA GEKW+ M+ EEK +Y
Sbjct: 25 PKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEKAQY 75
>gi|390348241|ref|XP_784026.3| PREDICTED: uncharacterized protein LOC578784 [Strongylocentrotus
purpuratus]
Length = 273
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 41 KEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGK 100
K+G I V K++ D PKKPPTA+FYFL DFR+ Q + I+ R + +
Sbjct: 89 KDGDQIPRISVYRKVR------DPDKPKKPPTAYFYFLTDFRE--QMKGKTIEKGRRLTE 140
Query: 101 ACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRK 139
CGE+W +T E+K Y + + + M D+ K+K
Sbjct: 141 ICGEEWNKLTDEQKKPYLERVALEYKTYQGKMEDWRKKK 179
>gi|213959194|gb|ACJ54931.1| HMG protein [Oryza sativa Japonica Group]
Length = 131
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
PK+ T FF FL +FR + E++P+ K + A+ KA GEKW+ M+ EEK +Y
Sbjct: 25 PKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEKAQY 75
>gi|297812105|ref|XP_002873936.1| hypothetical protein ARALYDRAFT_488801 [Arabidopsis lyrata subsp.
lyrata]
gi|297319773|gb|EFH50195.1| hypothetical protein ARALYDRAFT_488801 [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQ-EQNPDI-KSMRAIGKACGEKWKTMTYEEKVKYYDIA 121
S PK+P TAFF F+ DFRK F+ E N K IG GEKW ++T +EK Y D A
Sbjct: 109 SNKPKRPLTAFFIFMNDFRKTFKTEHNGSFAKDAAKIG---GEKWMSLTEDEKKVYLDKA 165
Query: 122 TEKRAEFDR 130
E +AE+++
Sbjct: 166 AELKAEYNK 174
>gi|229367846|gb|ACQ58903.1| High mobility group protein B2 [Anoplopoma fimbria]
Length = 213
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F D R +E+NP I S+ I K GE W T T ++KV Y A
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRPRIKEENPGI-SIGDIAKKLGEFWSTQTSKDKVPYEARAG 150
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ + ++++ +A Y + GK
Sbjct: 151 KLKEKYEKDVAAYKAKSGLGK 171
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D P+ +++ +F+ R+ ++++P + A K C E+WKTM+ +EKVK+ D+A
Sbjct: 4 DPNKPRGKTSSYAFFVATCREEHKKKHPGVSVGFAEFSKKCSERWKTMSAKEKVKFEDLA 63
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M YI
Sbjct: 64 KNDKVRYEREMKTYI 78
>gi|427794389|gb|JAA62646.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 604
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D+ PK+P TAF F+ DFRK + P+ + A+ K GE+W++M+ E+K Y +
Sbjct: 254 DANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSEEDKRPYVERQN 312
Query: 123 EKRAEFDRAMADYIKRKENGK 143
E++ ++++ M +Y ++++ +
Sbjct: 313 EEKMKYEQNMEEYRRKQQTAE 333
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 46 ISAKRVTTKLKKKHEKLDSK---MPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKAC 102
+ A VT KLK K K++ PK+ TA+ F + +R+ ++ I + GK C
Sbjct: 157 MGAAAVTGKLKHKKPKVNKDGVPAPKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKEC 216
Query: 103 GEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGK 143
KW TM+ E+K + A R + R MA Y ++ K
Sbjct: 217 AGKWNTMSDEDKQPFLSAAARDRERYKREMAVYKPARDANK 257
>gi|350397805|ref|XP_003484997.1| PREDICTED: high mobility group protein 20A-like [Bombus impatiens]
Length = 328
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 52 TTKLKKKHEKL--DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTM 109
TT KK +K+ D+ PK+P T +F FL D R+ + +NP + S I K +W T+
Sbjct: 66 TTNRAKKRKKIPRDATAPKQPLTGYFRFLNDRREKVRTENPTL-SFAEITKLLASEWSTL 124
Query: 110 TYEEKVKYYDIATEKRAEFDRAMADY 135
++K +Y D A + + ++R +DY
Sbjct: 125 PADQKQQYLDAAEQDKERYNREFSDY 150
>gi|162460188|ref|NP_001105108.1| nucleosome/chromatin assembly factor D [Zea mays]
gi|4995921|emb|CAB44297.1| HMG1 protein [Zea mays]
Length = 123
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
K+ T FF FL +FR + E++P++K ++ + KA GEKW++M+ EEK KY
Sbjct: 20 KRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKY 69
>gi|195627962|gb|ACG35811.1| HMG1/2-like protein [Zea mays]
Length = 123
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
K+ T FF FL +FR + E++P++K ++ + KA GEKW++M+ EEK KY
Sbjct: 20 KRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKY 69
>gi|414585862|tpg|DAA36433.1| TPA: HMG1 protein [Zea mays]
Length = 123
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
K+ T FF FL +FR + E++P++K ++ + KA GEKW++M+ EEK KY
Sbjct: 20 KRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKY 69
>gi|414585863|tpg|DAA36434.1| TPA: hypothetical protein ZEAMMB73_396569 [Zea mays]
Length = 119
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
K+ T FF FL +FR + E++P++K ++ + KA GEKW++M+ EEK KY
Sbjct: 20 KRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKY 69
>gi|340724328|ref|XP_003400534.1| PREDICTED: high mobility group protein 20A-like [Bombus terrestris]
Length = 329
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 52 TTKLKKKHEKL--DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTM 109
TT KK +K+ D+ PK+P T +F FL D R+ + +NP + S I K +W T+
Sbjct: 66 TTNRAKKRKKVPRDATAPKQPLTGYFRFLNDRREKVRTENPTL-SFAEITKLLASEWSTL 124
Query: 110 TYEEKVKYYDIATEKRAEFDRAMADY 135
++K +Y D A + + ++R +DY
Sbjct: 125 PADQKQQYLDAAEQDKERYNREFSDY 150
>gi|312190935|gb|ADQ43366.1| HMGBa [Litopenaeus vannamei]
Length = 222
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +AFFY+ D R + NPD S+ + K G +W + +EKVKY +A
Sbjct: 103 DPNKPKRALSAFFYYANDERPKVRAANPDF-SVGEVAKELGRQWNELGEDEKVKYEKLAE 161
Query: 123 EKRAEFDRAMADY 135
E RA +DR M Y
Sbjct: 162 EDRARYDREMTAY 174
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
TA+ +F++ R ++ +PD A + C E+WKTM+ +EK K++D+A + + +D
Sbjct: 19 TAYAFFVQTCRTEHKKLHPDENVQFAEFSRQCSERWKTMSDKEKKKFHDMAEDDKKRYDE 78
Query: 131 AMADYI 136
M D++
Sbjct: 79 EMKDFV 84
>gi|66523545|ref|XP_625193.1| PREDICTED: high mobility group protein 20A-like isoform 1 [Apis
mellifera]
Length = 329
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 52 TTKLKKKHEKL--DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTM 109
TT KK +K D+ PK+P T +F FL D R+ + +NP + S I K +W T+
Sbjct: 66 TTNRAKKRKKTPRDATAPKQPLTGYFRFLNDRREKVRSENPTL-SFAEITKLLASEWSTL 124
Query: 110 TYEEKVKYYDIATEKRAEFDRAMADY 135
++K +Y D A + + ++R +DY
Sbjct: 125 PADQKQQYLDAAEQDKERYNREFSDY 150
>gi|380021877|ref|XP_003694783.1| PREDICTED: high mobility group protein 20A-like [Apis florea]
Length = 329
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 52 TTKLKKKHEKL--DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTM 109
TT KK +K D+ PK+P T +F FL D R+ + +NP + S I K +W T+
Sbjct: 66 TTNRAKKRKKTPRDATAPKQPLTGYFRFLNDRREKVRNENPTL-SFAEITKLLASEWSTL 124
Query: 110 TYEEKVKYYDIATEKRAEFDRAMADY 135
++K +Y D A + + ++R +DY
Sbjct: 125 PADQKQQYLDAAEQDKERYNREFSDY 150
>gi|432951224|ref|XP_004084757.1| PREDICTED: high mobility group protein B2-like [Oryzias latipes]
Length = 221
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F D R +E NP I S+ I K GE W T + ++K Y A
Sbjct: 114 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGI-SIGDIAKKLGELWATQSAKDKAPYEAKAA 172
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ + ++++ +A Y + +GK
Sbjct: 173 KLKEKYEKDVAAYRAKGGSGK 193
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 48 AKRVTTKLKKKHEKLDSKMPKKP---PTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACG 103
A+ V K + + + +K P KP +A+ YF+ R+ ++++P A K C
Sbjct: 9 ARSVAEKARLRQIEAMTKDPNKPRGKTSAYAYFVATCREEHKKKHPGTSVNFAEFSKKCS 68
Query: 104 EKWKTMTYEEKVKYYDIATEKRAEFDRAMADYI 136
E+WKTM+ +EKVK+ ++A +A +DR M Y+
Sbjct: 69 ERWKTMSSKEKVKFDELAKTDKARYDREMKTYV 101
>gi|346986304|ref|NP_001069753.2| high mobility group protein B3 isoform 1 [Bos taurus]
Length = 274
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 163 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 221
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 222 KLKEKYEKDVADY---KSKGKFDGA 243
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 88 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 147
Query: 131 AMADY 135
M DY
Sbjct: 148 EMKDY 152
>gi|349604600|gb|AEQ00107.1| High mobility group protein B3-like protein, partial [Equus
caballus]
Length = 118
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 60 EKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYD 119
+K D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y +
Sbjct: 3 KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNN 61
Query: 120 IATEKRAEFDRAMADY 135
A + + ++++ +ADY
Sbjct: 62 KAAKLKEKYEKDVADY 77
>gi|168056739|ref|XP_001780376.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668218|gb|EDQ54830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%)
Query: 13 QSSSASNLKMVLRKRPTRHSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPT 72
Q + L ++K+ + V + G K K S +V K KK + D PK+P +
Sbjct: 57 QEAKTKELLTKMKKQVMKQVVKKSDGAIKSTKRKSEPKVIKKQAKKVKTKDPNAPKRPAS 116
Query: 73 AFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAM 132
F F+E FRK +++ NP+ K + A KA GEKWK MT EE+ Y A ++ +++AM
Sbjct: 117 GFLVFMESFRKTYKDANPESKGVAAAAKAGGEKWKQMTEEERAPYNKDAEARKLNYEQAM 176
Query: 133 ADY 135
+Y
Sbjct: 177 TNY 179
>gi|410930542|ref|XP_003978657.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 201
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+ ++ D PK+PP+AFF F ++R ++Q P + S+ K GE W +T EK
Sbjct: 86 KRGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGL-SIGDCAKKLGEMWSKLTQSEKQ 144
Query: 116 KYYDIATEKRAEFDRAMADY 135
Y + A + R ++DR M Y
Sbjct: 145 PYEEKAQKLREKYDRDMVAY 164
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D PK +A+ +F++ R+ +++NP+ A K C E+WK ++ +K + D+A
Sbjct: 5 DVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKGLSASDKKCFEDMA 64
Query: 122 TEKRAEFDRAMADYIKRKENGK 143
+ ++R M DY+ K GK
Sbjct: 65 KADKVRYNREMRDYVPPKGFGK 86
>gi|440910877|gb|ELR60625.1| High mobility group protein B3 [Bos grunniens mutus]
Length = 236
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 183
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 184 KLKEKYEKDVADY---KSKGKFDGA 205
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 50 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 109
Query: 131 AMADY 135
M DY
Sbjct: 110 EMKDY 114
>gi|81673590|gb|AAI09794.1| High-mobility group box 3 [Bos taurus]
gi|296471156|tpg|DAA13271.1| TPA: high mobility group protein B3 isoform 1 [Bos taurus]
Length = 236
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 183
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 184 KLKEKYEKDVADY---KSKGKFDGA 205
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 50 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 109
Query: 131 AMADY 135
M DY
Sbjct: 110 EMKDY 114
>gi|148235321|ref|NP_001089163.1| high mobility group box 3 [Xenopus laevis]
gi|55824420|gb|AAV66347.1| high mobility group B3b protein [Xenopus laevis]
gi|114108280|gb|AAI23148.1| LOC734200 protein [Xenopus laevis]
Length = 201
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 55 LKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEK 114
+KK D PK+PP+ FF F +FR + NP I S+ I K GE W ++ EK
Sbjct: 81 VKKGKRNKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDIAKKLGEMWNNLSDGEK 139
Query: 115 VKYYDIATEKRAEFDRAMADY 135
Y + A + + ++++ +ADY
Sbjct: 140 QPYNNKAAKLKEKYEKDVADY 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K PK +A+ YF++ R+ +++NP+I + K C E+W++M+ +EK K+ D
Sbjct: 3 KRDPKKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWRSMSGKEKSKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M D+
Sbjct: 63 LAKADKVRYDREMKDF 78
>gi|426258242|ref|XP_004022724.1| PREDICTED: high mobility group protein B3 [Ovis aries]
Length = 248
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 160 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 218
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 219 KLKEKYEKDVADY 231
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 85 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 144
Query: 131 AMADY 135
M DY
Sbjct: 145 EMKDY 149
>gi|427793707|gb|JAA62305.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 529
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D+ PK+P TAF F+ DFRK + P+ + A+ K GE+W++M+ E+K Y +
Sbjct: 275 DANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSEEDKRPYVERQN 333
Query: 123 EKRAEFDRAMADYIKRKE 140
E++ ++++ M +Y ++++
Sbjct: 334 EEKMKYEQNMEEYRRKQQ 351
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 46 ISAKRVTTKLKKKHEKLDS---KMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKAC 102
+ A VT KLK K K++ PK+ TA+ F + +R+ ++ I + GK C
Sbjct: 178 MGAAAVTGKLKHKKPKVNKDGVPAPKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKEC 237
Query: 103 GEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
KW TM+ E+K + A R + R MA Y
Sbjct: 238 AGKWNTMSDEDKQPFLSAAARDRERYKREMAVY 270
>gi|427780835|gb|JAA55869.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 508
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D+ PK+P TAF F+ DFRK + P+ + A+ K GE+W++M+ E+K Y +
Sbjct: 254 DANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSEEDKRPYVERQN 312
Query: 123 EKRAEFDRAMADYIKRKE 140
E++ ++++ M +Y ++++
Sbjct: 313 EEKMKYEQNMEEYRRKQQ 330
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 46 ISAKRVTTKLKKKHEKLDS---KMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKAC 102
+ A VT KLK K K++ PK+ TA+ F + +R+ ++ I + GK C
Sbjct: 157 MGAAAVTGKLKHKKPKVNKDGVPAPKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKEC 216
Query: 103 GEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
KW TM+ E+K + A R + R MA Y
Sbjct: 217 AGKWNTMSDEDKQPFLSAAARDRERYKREMAVY 249
>gi|387914026|gb|AFK10622.1| high mobility group box 3 [Callorhinchus milii]
Length = 210
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 58 KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVK 116
K K D K P+ +++ YF++ R+ +++NPD+ + K C E+WKTM+ +EK K
Sbjct: 7 KMAKRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSK 66
Query: 117 YYDIATEKRAEFDRAMADYI 136
+ D+A + +DR M YI
Sbjct: 67 FEDLAKVDKVRYDREMKTYI 86
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+PP+ FF F D R + +P + ++ + K GE W T EEK Y
Sbjct: 94 KKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGL-TIGDVAKKLGELWNGCTDEEKKPYNAK 152
Query: 121 ATEKRAEFDRAMADYIKRKENGKVEN 146
A + + ++++ +ADY + GKVE+
Sbjct: 153 AAKLKEKYEKDVADY---RTEGKVES 175
>gi|431920081|gb|ELK18129.1| High mobility group protein B3 [Pteropus alecto]
Length = 255
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 141 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 199
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 200 KLKEKYEKDVADY 212
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 66 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 125
Query: 131 AMADY 135
M DY
Sbjct: 126 EMKDY 130
>gi|359062996|ref|XP_003585778.1| PREDICTED: high mobility group protein B3-like, partial [Bos
taurus]
Length = 186
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ +IA + +DR
Sbjct: 14 SAYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|307192730|gb|EFN75838.1| High mobility group protein DSP1 [Harpegnathos saltator]
Length = 205
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +AFFYF ++ R +E +P++ + I K G+ W + + K KY IA
Sbjct: 119 DKDAPKRALSAFFYFCQELRSKMRELHPEM-GVGEIAKELGKLWMSTDLQTKSKYMAIAE 177
Query: 123 EKRAEFDRAMADYIKRKEN 141
E RA ++R + Y KR +N
Sbjct: 178 EDRARYEREIIAYNKRVKN 196
>gi|71012570|ref|XP_758511.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
gi|46098169|gb|EAK83402.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
Length = 125
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 15 SSASNLKMVLRKRPTRHSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAF 74
S+ S+ VL P R V A K S S ++ TTK KK D PK+P +A+
Sbjct: 7 STQSSFASVLIVSPARAIVKMAKADTKTKSSTSTQKRTTKAKK-----DPDAPKRPLSAY 61
Query: 75 FYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMAD 134
+F +D R+ + NP+ +G+ G KWK M+ EK Y D+A +A + A
Sbjct: 62 MFFSQDQRERVKNANPEA-GFGEVGRLLGAKWKEMSEAEKKPYNDMANRDKARAEAEKAA 120
Query: 135 YIKRK 139
Y KR+
Sbjct: 121 YNKRR 125
>gi|350588033|ref|XP_003482539.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
gi|350588037|ref|XP_003482541.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 196
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WK + +EK K+ ++A + +DR
Sbjct: 14 SAYDFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKPTSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|311277128|ref|XP_003135516.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 202
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|392877702|gb|AFM87683.1| high mobility group box 3 [Callorhinchus milii]
Length = 203
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ YF++ R+ +++NPD+ + K C E+WKTM+ +EK K+ D
Sbjct: 3 KRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + +DR M YI
Sbjct: 63 LAKVDKVRYDREMKTYI 79
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+PP+ FF F D R + +P + ++ + K GE W T EEK Y
Sbjct: 87 KKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGL-TIGDVAKKLGELWNGCTDEEKKPYNAK 145
Query: 121 ATEKRAEFDRAMADYIKRKENGKVEN 146
A + + ++++ +ADY + GKVE+
Sbjct: 146 AAKLKEKYEKDVADY---RTKGKVES 168
>gi|392333067|ref|XP_003752781.1| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
gi|392353165|ref|XP_001067503.2| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
Length = 212
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y
Sbjct: 101 KKDPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIEDVVKKLGEMWNNLSDSEKQPYMTK 159
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENS 147
A + + ++++ +ADY K NG+ + +
Sbjct: 160 AAKLKEKYEKDVADY---KSNGQFDGA 183
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ + +NP++ A K C E+WKTM+ +EK K+ ++A + + R
Sbjct: 28 SAYAFFVQTCREEHKTKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYGR 87
Query: 131 AMADY 135
M DY
Sbjct: 88 EMKDY 92
>gi|384501419|gb|EIE91910.1| hypothetical protein RO3G_16621 [Rhizopus delemar RA 99-880]
Length = 183
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK P FF + R +++ P+ +S+ + + G+KWK +T EEK KYYDI
Sbjct: 49 KRDPNAPKGPGNVFFLYCRMERDNIKDEVPN-ESLGEVTRLLGQKWKALTKEEKQKYYDI 107
Query: 121 ATEKRAEFDRAMADY 135
++ E++ AM Y
Sbjct: 108 YKKEMEEYESAMKSY 122
>gi|253756810|gb|ACT35162.1| HmgB3y, partial [Monodelphis domestica]
Length = 193
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 86 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYNNKAA 144
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 145 KLKEKYEKDVADY 157
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D K PK +A+ +F++ R+ +++NP++ A K C E+WK M+ +EK K+ ++A
Sbjct: 2 DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKNMSGKEKSKFDEMA 61
Query: 122 TEKRAEFDRAMADY 135
+ +DR M DY
Sbjct: 62 KADKLRYDREMKDY 75
>gi|118343940|ref|NP_001071792.1| transcription factor protein [Ciona intestinalis]
gi|70570753|dbj|BAE06615.1| transcription factor protein [Ciona intestinalis]
Length = 310
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+A+F FL DFRK + ++ K I K GE W +++ EK YY A
Sbjct: 126 DPNRPKRPPSAYFLFLADFRKNYPGKSDPAKE---ITKKAGEAWNSLSDAEKTPYYRSAQ 182
Query: 123 EKRAEFDRAMADY 135
RA++++ + Y
Sbjct: 183 LVRAKWEQDLEAY 195
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
K+P TA+ YF+ +R+ +E + + I +AC EKW+ M EEK + +++ R
Sbjct: 54 KRPTTAYLYFVSKYRETLKEAGEVVPKAKIITQACAEKWRNMNEEEKEPFLELSRRDRER 113
Query: 128 F--DRAM 132
+ D+A+
Sbjct: 114 WQKDKAL 120
>gi|384500344|gb|EIE90835.1| hypothetical protein RO3G_15546 [Rhizopus delemar RA 99-880]
Length = 183
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK P FF + R +++ P+ +S+ + + G+KWK +T EEK KYYDI
Sbjct: 49 KRDPNAPKGPGNVFFLYCRMERDNIKDEVPN-ESLGEVTRLLGQKWKALTKEEKQKYYDI 107
Query: 121 ATEKRAEFDRAMADY 135
++ E++ AM Y
Sbjct: 108 YKKEMEEYESAMKSY 122
>gi|344300446|gb|EGW30767.1| Non-histone chromosomal protein 6 [Spathaspora passalidarum NRRL
Y-27907]
Length = 93
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 54 KLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEE 113
K K +K D PK+ +A+ +F + R + +NP I S +GK GEKWK +T +E
Sbjct: 7 KRKATRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKALTADE 65
Query: 114 KVKYYDIATEKRAEFDRAMADYIKRKEN 141
KV Y + A + +++ A+Y KR N
Sbjct: 66 KVPYENKAETDKKRYEKEKAEYAKRNGN 93
>gi|729728|sp|P40618.2|HMGB3_CHICK RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|63494|emb|CAA45065.1| HMG2a [Gallus gallus]
Length = 202
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSAFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|347921933|ref|NP_990626.2| high mobility group protein B3 [Gallus gallus]
Length = 217
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 104 DPNAPKRPPSAFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 162
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 163 KLKEKYEKDVADY 175
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 29 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 88
Query: 131 AMADY 135
M DY
Sbjct: 89 EMKDY 93
>gi|164450473|ref|NP_001106728.1| high mobility group protein B3 isoform 2 [Bos taurus]
gi|146324910|sp|Q32L31.2|HMGB3_BOVIN RecName: Full=High mobility group protein B3
gi|296471157|tpg|DAA13272.1| TPA: high mobility group protein B3 isoform 2 [Bos taurus]
gi|399227521|gb|AFP36466.1| HMGB3 transcript variant 1/2 [Bos taurus]
gi|399227522|gb|AFP36467.1| HMGB3 transcript variant 3 [Bos taurus]
Length = 200
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|348538096|ref|XP_003456528.1| PREDICTED: high mobility group protein B2-like [Oreochromis
niloticus]
Length = 196
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F D R +E NP I S+ I K GE W T + ++K Y A
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGI-SIGDIAKKLGEMWATQSAKDKAPYEAKAA 149
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ ++++ +A Y + +GK
Sbjct: 150 RLKEKYEKDVAAYRAKGGSGK 170
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D P+ +++ +F+ R+ ++++P A K C E+WKTM+ +EK K+ ++A
Sbjct: 4 DPNKPRGKTSSYAFFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSPKEKGKFEEMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ +DR M Y+
Sbjct: 64 KNDKVRYDREMKTYV 78
>gi|332025495|gb|EGI65658.1| High mobility group protein DSP1 [Acromyrmex echinatior]
Length = 204
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +AFFYF ++ R +E +P++ + I K G+ W + + K KY IA
Sbjct: 118 DKDAPKRALSAFFYFCQELRSKMRELHPEM-GVGDIAKELGKLWMSTDLQTKSKYMAIAE 176
Query: 123 EKRAEFDRAMADYIKRKEN 141
E RA ++R + Y KR +N
Sbjct: 177 EDRARYEREIIAYNKRVKN 195
>gi|118344422|ref|NP_001072036.1| transcription factor protein [Ciona intestinalis]
gi|70570508|dbj|BAE06614.1| transcription factor protein [Ciona intestinalis]
Length = 447
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+A+F FL DFRK + ++ K I K GE W +++ EK YY A
Sbjct: 263 DPNRPKRPPSAYFLFLADFRKNYPGKSDPAKE---ITKKAGEAWNSLSDAEKTPYYRSAQ 319
Query: 123 EKRAEFDRAMADY 135
RA++++ + Y
Sbjct: 320 LVRAKWEQDLEAY 332
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
K+P TA+ YF+ +R+ +E + + I +AC EKW+ M EEK + +++ R
Sbjct: 191 KRPTTAYLYFVSKYRETLKEAGEVVPKAKIITQACAEKWRNMNEEEKEPFLELSRRDRER 250
Query: 128 F--DRAM 132
+ D+A+
Sbjct: 251 WQKDKAL 257
>gi|344299188|ref|XP_003421269.1| PREDICTED: high mobility group protein B3-like [Loxodonta africana]
Length = 200
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|148694630|gb|EDL26577.1| mCG10155, isoform CRA_d [Mus musculus]
Length = 220
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y A
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYVTKAA 167
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 168 KLKEKYEKDVADY---KSKGKFDGA 189
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 34 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 93
Query: 131 AMADY 135
M DY
Sbjct: 94 EMKDY 98
>gi|57112857|ref|XP_538194.1| PREDICTED: high mobility group protein B3 [Canis lupus familiaris]
gi|338729649|ref|XP_001505130.3| PREDICTED: high mobility group protein B3-like isoform 1 [Equus
caballus]
Length = 201
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|417396975|gb|JAA45521.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 200
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|301778413|ref|XP_002924621.1| PREDICTED: high mobility group protein B3-like [Ailuropoda
melanoleuca]
Length = 201
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|410989557|ref|XP_004001438.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Felis catus]
Length = 201
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|392354293|ref|XP_003751730.1| PREDICTED: high mobility group protein B3-like isoform 1 [Rattus
norvegicus]
Length = 241
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y A
Sbjct: 130 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYMTKAA 188
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 189 KLKEKYEKDVADY---KSKGKFDGA 210
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 55 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 114
Query: 131 AMADY 135
M DY
Sbjct: 115 EMKDY 119
>gi|432953329|ref|XP_004085352.1| PREDICTED: high mobility group protein B2-like isoform 1 [Oryzias
latipes]
Length = 200
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+ ++ D PK+PP+AFF F ++R ++Q P + S+ K GE W ++ EK
Sbjct: 86 KRGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGL-SIGDCAKKLGEMWSKLSQSEKQ 144
Query: 116 KYYDIATEKRAEFDRAMADY 135
Y + A + R ++DR M Y
Sbjct: 145 PYEEKAQKLREKYDRDMVAY 164
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D PK +A+ +F++ R+ +++NP+ A K C E+WK ++ +K + D+A
Sbjct: 5 DVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFEDMA 64
Query: 122 TEKRAEFDRAMADYIKRKENGK 143
+ ++R M DY+ K GK
Sbjct: 65 KADKVRYNREMCDYVPPKGFGK 86
>gi|348543650|ref|XP_003459296.1| PREDICTED: high mobility group protein B2-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+ ++ D PK+PP+AFF F ++R ++Q P + S+ K GE W ++ EK
Sbjct: 86 KRGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGL-SIGDCAKKLGEMWSKLSQSEKQ 144
Query: 116 KYYDIATEKRAEFDRAMADY 135
Y + A + R ++DR M Y
Sbjct: 145 PYEEKAQKLREKYDRDMVAY 164
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D PK +A+ +F++ R+ +++NP+ + K C E+WK ++ +K + D+A
Sbjct: 5 DINKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFEDMA 64
Query: 122 TEKRAEFDRAMADYIKRKENGK 143
+ ++R M DY+ K GK
Sbjct: 65 KADKVRYNREMKDYVPPKGFGK 86
>gi|384246550|gb|EIE20040.1| hypothetical protein COCSUDRAFT_83556 [Coccomyxa subellipsoidea
C-169]
Length = 140
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 50/82 (60%)
Query: 54 KLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEE 113
++KK+ K P++P +A+ +F+ +FR+ ++ +P++ + +G A GE W+++T E+
Sbjct: 7 RVKKRRAKKPKDAPRRPKSAYMFFMAEFREKWKVDHPEVNRVSDVGVAAGEAWRSLTPEQ 66
Query: 114 KVKYYDIATEKRAEFDRAMADY 135
K Y + + +A + +A+Y
Sbjct: 67 KAVYEEQSVGSKATYAAEIAEY 88
>gi|50548527|ref|XP_501733.1| YALI0C11671p [Yarrowia lipolytica]
gi|74635076|sp|Q6CC79.1|NHP6_YARLI RecName: Full=Non-histone chromosomal protein 6
gi|49647600|emb|CAG82043.1| YALI0C11671p [Yarrowia lipolytica CLIB122]
Length = 103
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+ +F D R + NP I + +GKA GEKWKT+T EKV Y + AT
Sbjct: 21 DPNAPKRALSAYMFFANDNRDAIRADNPGI-AFGQVGKALGEKWKTLTDAEKVPYEEKAT 79
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEFDEYE 157
+ KR E+ K +EFDE E
Sbjct: 80 ADK-----------KRYEDEKAAYKANAAEFDEEE 103
>gi|413923415|gb|AFW63347.1| hypothetical protein ZEAMMB73_127996 [Zea mays]
Length = 95
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 78 LEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIK 137
+ +FR+ +Q Q+P KS+ A+ KA GEKW++M+ +EK Y D A +K+ ++++ A+ K
Sbjct: 1 MSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQKKQDYEKTKANIEK 60
Query: 138 RKENGKVENSEED 150
+ K +++D
Sbjct: 61 ESTSSKKAKTDDD 73
>gi|322797845|gb|EFZ19753.1| hypothetical protein SINV_15148 [Solenopsis invicta]
Length = 220
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +AFFYF ++ R +E +P++ + I K G+ W + + K KY IA
Sbjct: 134 DKDAPKRALSAFFYFCQELRGKMRELHPEM-GVGDIAKELGKLWMSTDLQTKSKYMAIAE 192
Query: 123 EKRAEFDRAMADYIKRKEN 141
E RA ++R + Y KR +N
Sbjct: 193 EDRARYEREIIAYNKRVKN 211
>gi|148694627|gb|EDL26574.1| mCG10155, isoform CRA_b [Mus musculus]
Length = 206
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y A
Sbjct: 95 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYVTKAA 153
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 154 KLKEKYEKDVADY---KSKGKFDGA 175
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 20 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 79
Query: 131 AMADY 135
M DY
Sbjct: 80 EMKDY 84
>gi|307191139|gb|EFN74837.1| High mobility group protein DSP1 [Camponotus floridanus]
Length = 205
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +AFFYF ++ R +E +P++ + I K G+ W + + K KY IA
Sbjct: 119 DKDAPKRALSAFFYFCQELRGKMRELHPEM-GVGDIAKELGKLWMSTDLQTKSKYMAIAE 177
Query: 123 EKRAEFDRAMADYIKRKEN 141
E RA ++R + Y KR +N
Sbjct: 178 EDRARYEREIIAYNKRVKN 196
>gi|254826706|ref|NP_001157151.1| high mobility group protein B3 [Monodelphis domestica]
gi|253756818|gb|ACT35166.1| HmgB3x [Monodelphis domestica]
Length = 201
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|349802605|gb|AEQ16775.1| putative high mobility group box 3 [Pipa carvalhoi]
Length = 149
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y + A
Sbjct: 64 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNEGEKQPYNNKAA 122
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 123 KLKEKYEKDVADY 135
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 86 QEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
+++NP+I + K C E+WK M+ +EK K+ D+A + +DR DY
Sbjct: 3 KKKNPEIPVNFAEFSKKCSERWKIMSAKEKSKFEDLAKADKVRYDREKKDY 53
>gi|383858168|ref|XP_003704574.1| PREDICTED: putative high mobility group protein 1-like 10-like
[Megachile rotundata]
Length = 202
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +AFFYF ++ R +E +P++ + I K G+ W + + K KY IA
Sbjct: 116 DKDAPKRALSAFFYFCQELRGKMRELHPEM-GVGDIAKELGKLWMSTDLQTKSKYMAIAE 174
Query: 123 EKRAEFDRAMADYIKRKEN 141
E RA ++R + Y KR +N
Sbjct: 175 EDRARYEREIIAYNKRVKN 193
>gi|358410870|ref|XP_003581858.1| PREDICTED: high mobility group protein B3-like [Bos taurus]
Length = 197
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 123 EKRAEFDRAMADY 135
+ ++++ +ADY
Sbjct: 148 KLXEKYEKDVADY 160
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ +IA + +DR
Sbjct: 14 SAYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|145541886|ref|XP_001456631.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424443|emb|CAK89234.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP T FF F + +R+ ++NP+IK + I + G KW +M+ +EK Y D
Sbjct: 47 DPNAPKKPLTPFFLFNQKYREKVVDRNPEIK-LTQISQMAGNKWSSMSEQEKKPYVDQYN 105
Query: 123 EKRAEFDRAMADY 135
+ ++++ + DY
Sbjct: 106 AAKEKYEQELKDY 118
>gi|291410190|ref|XP_002721383.1| PREDICTED: high-mobility group box 3 [Oryctolagus cuniculus]
Length = 215
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y A
Sbjct: 104 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYITKAA 162
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 163 KLKEKYEKDVADY---KSKGKFDGA 184
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 29 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 88
Query: 131 AMADY 135
M DY
Sbjct: 89 EMKDY 93
>gi|47190944|emb|CAF93003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+ ++ D PK+PP+AFF F ++R ++Q P + S+ K GE W ++ EK
Sbjct: 89 KRGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQFPGL-SIGDCAKKLGEMWSKLSQSEKQ 147
Query: 116 KYYDIATEKRAEFDRAMADY 135
Y + A + R ++DR M Y
Sbjct: 148 PYEEKAQKLREKYDRDMVAY 167
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D PK +A+ +F++ R+ +++NP+ A K C E+WK ++ +K + D+A
Sbjct: 8 DVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSAGDKKCFEDMA 67
Query: 122 TEKRAEFDRAMADYIKRKENGK 143
+ ++R M DY+ K GK
Sbjct: 68 KADKVRYNREMRDYVPPKGFGK 89
>gi|440804471|gb|ELR25348.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 205
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
KK +K D PKKP +AFF+F + R +++NPD S +GK GE+W + +E+ +
Sbjct: 95 KKRKKKDPNAPKKPCSAFFHFSKKMRPRIKDENPDA-SFGQLGKIIGEQWSKLGADERKE 153
Query: 117 YYDIATEKRAEFDRAMADYIKRK 139
+ +A + + + M DY +K
Sbjct: 154 FETLAAADKERYAKEMKDYQAKK 176
>gi|328790254|ref|XP_624266.2| PREDICTED: putative high mobility group protein B1-like 1-like
[Apis mellifera]
Length = 202
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +AFFYF ++ R +E +P++ + I K G+ W + + K KY IA
Sbjct: 116 DKDAPKRALSAFFYFCQELRGKMRELHPEM-GVGDIAKELGKLWMSTDLQTKSKYMAIAE 174
Query: 123 EKRAEFDRAMADYIKRKEN 141
E RA ++R + Y KR +N
Sbjct: 175 EDRARYEREIIAYNKRVKN 193
>gi|281338637|gb|EFB14221.1| hypothetical protein PANDA_014002 [Ailuropoda melanoleuca]
Length = 168
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|395545985|ref|XP_003774876.1| PREDICTED: high mobility group protein B3-like [Sarcophilus
harrisii]
Length = 201
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|294463267|gb|ADE77169.1| unknown [Picea sitchensis]
Length = 482
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K K ++ D PK P TAFF F + R E+N ++ I K GE+WK MT EE+
Sbjct: 242 KSKRKEKDPSKPKHPVTAFFAFTNERRAALLEENHNV---LQIAKILGEEWKNMTKEERA 298
Query: 116 KYYDIATEKRAEFDRAMADYIKRK 139
Y IA E + ++ M Y ++K
Sbjct: 299 PYEQIAAEAKEKYMGEMELYKQKK 322
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKPPT+F F ++ RK ++ P + + I KWK + EK K+ D A
Sbjct: 377 DPNRPKKPPTSFLLFSKETRKKLVQERPGVNNT-TINALISLKWKDLGTAEKQKWVDEAA 435
Query: 123 EKRAEFDRAMADYIK 137
++ + + +Y K
Sbjct: 436 GAMVQYKKEVEEYNK 450
>gi|149410917|ref|XP_001509199.1| PREDICTED: high mobility group protein B3-like isoform 1
[Ornithorhynchus anatinus]
gi|345306624|ref|XP_003428488.1| PREDICTED: high mobility group protein B3-like isoform 2
[Ornithorhynchus anatinus]
Length = 201
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|380025634|ref|XP_003696574.1| PREDICTED: putative high mobility group protein B1-like 1-like
[Apis florea]
Length = 202
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +AFFYF ++ R +E +P++ + I K G+ W + + K KY IA
Sbjct: 116 DKDAPKRALSAFFYFCQELRGKMRELHPEM-GVGDIAKELGKLWMSTDLQTKSKYMAIAE 174
Query: 123 EKRAEFDRAMADYIKRKEN 141
E RA ++R + Y KR +N
Sbjct: 175 EDRARYEREIIAYNKRVKN 193
>gi|355694844|gb|AER99804.1| high-mobility group box 3 [Mustela putorius furo]
Length = 197
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 91 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 150 KLKEKYEKDVADY 162
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 16 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 75
Query: 131 AMADY 135
M DY
Sbjct: 76 EMKDY 80
>gi|335892928|gb|AEH59759.1| high mobility group box 1 [Lethenteron camtschaticum]
Length = 208
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+PP+AFF + ++R + +NP + ++ +I K GE W +EK Y
Sbjct: 90 KKDPNAPKRPPSAFFIYCAEYRSKVRAENPGL-TIGSIAKKLGEMWNNAPADEKSIYERK 148
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENS 147
+ + ++D+ MA Y + GKVE S
Sbjct: 149 TAKLKEKYDKDMASY---RSKGKVETS 172
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ YF++ R+ +++NP+ A K C E+WKTM+ +EK ++ D+A + +DR
Sbjct: 14 SSYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRFEDMAKVDKVRYDR 73
Query: 131 AMADYI 136
M Y+
Sbjct: 74 EMKTYV 79
>gi|1419611|emb|CAA67363.1| HMG [Lampetra fluviatilis]
Length = 208
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+PP+AFF + ++R + +NP + ++ +I K GE W +EK Y
Sbjct: 90 KKDPNAPKRPPSAFFIYCAEYRSKVRAENPGL-TIGSIAKKLGEMWNNAPADEKSIYERK 148
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENS 147
+ + ++D+ MA Y + GKVE S
Sbjct: 149 TAKLKEKYDKDMASY---RSKGKVETS 172
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ YF++ R+ +++NP+ A K C E+WKTM+ +EK ++ D+A + +DR
Sbjct: 14 SSYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRFEDMAKVDKVRYDR 73
Query: 131 AMADYI 136
M Y+
Sbjct: 74 EMKTYV 79
>gi|383854854|ref|XP_003702935.1| PREDICTED: high mobility group protein 20A-like [Megachile
rotundata]
Length = 329
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+K D+ PK+P T +F FL D R+ + +NP + S I K +W + ++K
Sbjct: 72 KRKKTPRDATAPKQPLTGYFRFLNDRREKVRNENPTL-SFAEITKLLASEWSNLPADQKQ 130
Query: 116 KYYDIATEKRAEFDRAMADY 135
+Y D A + + ++R +DY
Sbjct: 131 QYLDAAEQDKERYNREFSDY 150
>gi|148682307|gb|EDL14254.1| mCG114640 [Mus musculus]
Length = 200
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYVTKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|395857208|ref|XP_003800997.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 225
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SVGDVAKKLGEMWNNLSDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WK M+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKAMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|340711910|ref|XP_003394509.1| PREDICTED: putative high mobility group protein B1-like 1-like
[Bombus terrestris]
gi|350402612|ref|XP_003486543.1| PREDICTED: putative high mobility group protein B1-like 1-like
[Bombus impatiens]
Length = 202
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +AFFYF ++ R +E +P++ + I K G+ W + + K KY IA
Sbjct: 116 DKDAPKRALSAFFYFCQELRGKMRELHPEM-GVGDIAKELGKLWMSTDLQTKSKYMAIAE 174
Query: 123 EKRAEFDRAMADYIKRKEN 141
E RA ++R + Y KR +N
Sbjct: 175 EDRARYEREIIAYNKRVKN 193
>gi|6680231|ref|NP_032279.1| high mobility group protein B3 [Mus musculus]
gi|20138160|sp|O54879.3|HMGB3_MOUSE RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|2738989|gb|AAC16925.1| high mobility group protein homolog HMG4 [Mus musculus]
gi|15030059|gb|AAH11276.1| Hmgb3 protein [Mus musculus]
gi|26327985|dbj|BAC27733.1| unnamed protein product [Mus musculus]
gi|54035419|gb|AAH83352.1| High mobility group box 3 [Mus musculus]
gi|74146994|dbj|BAE27437.1| unnamed protein product [Mus musculus]
gi|74186760|dbj|BAE34835.1| unnamed protein product [Mus musculus]
gi|74192972|dbj|BAE34988.1| unnamed protein product [Mus musculus]
gi|74194280|dbj|BAE24671.1| unnamed protein product [Mus musculus]
gi|148694626|gb|EDL26573.1| mCG10155, isoform CRA_a [Mus musculus]
gi|148694628|gb|EDL26575.1| mCG10155, isoform CRA_a [Mus musculus]
gi|187957408|gb|AAI58038.1| High mobility group box 3 [Mus musculus]
Length = 200
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYVTKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|348551110|ref|XP_003461373.1| PREDICTED: high mobility group protein B3-like [Cavia porcellus]
Length = 202
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|354495940|ref|XP_003510086.1| PREDICTED: high mobility group protein B3-like [Cricetulus griseus]
gi|344249016|gb|EGW05120.1| High mobility group protein B3 [Cricetulus griseus]
Length = 200
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|397568766|gb|EJK46329.1| hypothetical protein THAOC_35006 [Thalassiosira oceanica]
Length = 356
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 45 SISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGE 104
+++ KRV K KK + D PK P TAF F + R+ + NPD K+ I G+
Sbjct: 263 AVAIKRV--KSNKKGKVRDPNRPKAPLTAFNLFAKSRREKIKTSNPD-KNFNEISALVGK 319
Query: 105 KWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
WK + +E+ +++D A +RAE+ AM Y
Sbjct: 320 AWKALADDERKQFFDDAAAERAEYKEAMTRY 350
>gi|358060355|dbj|GAA93760.1| hypothetical protein E5Q_00406 [Mixia osmundae IAM 14324]
Length = 119
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +A+ ++ +D R +E NPD S +GK G +WK + EK +Y D+AT
Sbjct: 43 DPNAPKRPLSAYMFYSQDKRTQVKEDNPDA-SFGELGKILGAQWKDLDESEKKQYNDMAT 101
Query: 123 EKRAEFDRAMADY 135
+ + A A Y
Sbjct: 102 RDKERYTNAKAAY 114
>gi|167396118|ref|XP_001741910.1| non-histone chromosomal protein [Entamoeba dispar SAW760]
gi|165893321|gb|EDR21615.1| non-histone chromosomal protein, putative [Entamoeba dispar SAW760]
Length = 111
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PKKP +A+F +L + R +E++PDIK I K E+WK + EEK +Y A R
Sbjct: 26 PKKPQSAYFLYLNEHRASIKEEHPDIK-FTEISKVASEQWKALGEEEKKEYQAKADAARE 84
Query: 127 EFDRAMADYIKRKE 140
++ + M Y +K+
Sbjct: 85 QYKKDMEKYTGKKQ 98
>gi|290560936|ref|NP_001166812.1| high mobility group box 3 [Rattus norvegicus]
gi|392354295|ref|XP_003751731.1| PREDICTED: high mobility group protein B3-like isoform 2 [Rattus
norvegicus]
gi|149027076|gb|EDL82825.1| rCG56793 [Rattus norvegicus]
gi|165971283|gb|AAI58740.1| Hmgb3 protein [Rattus norvegicus]
Length = 200
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYMTKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|392575401|gb|EIW68534.1| hypothetical protein TREMEDRAFT_32029 [Tremella mesenterica DSM
1558]
Length = 116
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 47 SAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
++K+ T + EK D PK+ +A+ +F++D+R + +PD+ S GK GEKW
Sbjct: 11 ASKKTETTKRAPKEKKDPNAPKRGLSAYMFFVQDYRPKIKNDHPDV-SFGETGKLLGEKW 69
Query: 107 KTMTYEEKVKYYDIATEK--RAEFDR 130
K M+ EK + D+A + RAE D+
Sbjct: 70 KAMSAAEKKPFEDLAAKDKLRAEKDK 95
>gi|359486418|ref|XP_003633441.1| PREDICTED: high mobility group B protein 1 [Vitis vinifera]
Length = 151
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 53/87 (60%), Gaps = 15/87 (17%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF FLE+FRK +++++P++K++ A +K Y A
Sbjct: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSA---------------DKAPYEAKAA 96
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEE 149
++++++++ MA Y K++E+ ++ EE
Sbjct: 97 KRKSDYEKLMAAYNKKQESMADDDEEE 123
>gi|351715334|gb|EHB18253.1| High mobility group protein B3, partial [Heterocephalus glaber]
Length = 151
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP FF F +FR + NP I S+ + K GE W ++ EK Y A
Sbjct: 40 DPNAPKRPPPGFFLFFSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYITKAA 98
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 99 KLKEKYEKDVADY---KSKGKFDGA 120
>gi|56384901|gb|AAV85889.1| high mobility group 1 protein [Pelodiscus sinensis]
Length = 202
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|224008000|ref|XP_002292959.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971085|gb|EED89420.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 105
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 32 SVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPD 91
S V G + G + +R+ K KK + D + PK+ +F +F + R E+ P
Sbjct: 3 SYVPPPGYDASGNLVEDRRINKKYLKKQK--DPEQPKRARGSFVFFTFEHRPKVMEEFPG 60
Query: 92 IKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
IK + +G GE+W+++ EEK KY D A E + F+ M Y
Sbjct: 61 IKFVE-MGSILGERWRSLPAEEKQKYEDQAQEDKLRFNAEMEKY 103
>gi|392878936|gb|AFM88300.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F R +E+ P + S+ I K GEKW M EEK+ Y A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGL-SIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 123 EKRAEFDRAMADYIKRKENGKVEN 146
+ + ++ + +A Y + + VEN
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVEN 189
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 46 ISAKRVTTK---LKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPD-IKSMRAIGKA 101
+S +R TT +K+K + D K P+ T++ F++ R+ ++++P+ + S K
Sbjct: 1 MSDRRATTTEPAIKRKMAR-DPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKK 59
Query: 102 CGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYI 136
C E+WKTM+ +EK K+ +++ E + ++ M DY+
Sbjct: 60 CSERWKTMSAKEKSKFEELSKEDKKRYESEMKDYV 94
>gi|414869181|tpg|DAA47738.1| TPA: hypothetical protein ZEAMMB73_864709 [Zea mays]
Length = 198
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
PK+PP+AFF F+ +FR+ +Q Q+P KS+ + K GEKW
Sbjct: 154 PKRPPSAFFVFMSEFRQEYQVQHPGNKSIVVVSKTAGEKW 193
>gi|355705241|gb|EHH31166.1| hypothetical protein EGK_21042 [Macaca mulatta]
Length = 200
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKLKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|384491112|gb|EIE82308.1| hypothetical protein RO3G_07013 [Rhizopus delemar RA 99-880]
Length = 425
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 9 PKESQSSSASNLKMVLRKRPTRHSVVAAVGIEKEGKSISAKRVTTKLK-KKHEKLDSKMP 67
P + +ASN+ +R S++ + + +S+ + K K ++H K D P
Sbjct: 135 PLNDTNENASNVVDTMR------SII--ISSNDDNESVQSDSTAPKRKYRRHAKPDRNAP 186
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KPP+A+ F D R + QN S + K G++WK ++Y EK Y AT + E
Sbjct: 187 IKPPSAYVMFSNDARAKLKNQN---LSFAELAKVVGDQWKNLSYYEKQAYERKATRAKDE 243
Query: 128 FDRAMADYIKRKE 140
+ A+ Y + E
Sbjct: 244 YLAALEHYRQTNE 256
>gi|410917315|ref|XP_003972132.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 214
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+PP+AFF F D R +E NP I S+ I K GE W T ++K Y
Sbjct: 89 KKDPNAPKRPPSAFFVFCSDHRPKIKEDNPGI-SIGDIAKKLGELWSTQGPKDKAPYEAR 147
Query: 121 ATEKRAEFDRAMADY 135
A + + ++++ +A Y
Sbjct: 148 AAKLKEKYEKDVAAY 162
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D PK +++ +F+ R ++++P + K C E+WK M+ +EK K+ ++A
Sbjct: 3 DHGRPKGKMSSYAFFVTTCRDEHKKKHPGTPVNFSEFSKKCSERWKNMSSKEKSKFEELA 62
Query: 122 TEKRAEFDRAMADYI 136
+ +D+ M Y+
Sbjct: 63 KTDKIRYDQEMQSYV 77
>gi|393236123|gb|EJD43674.1| hypothetical protein AURDEDRAFT_114700 [Auricularia delicata
TFB-10046 SS5]
Length = 125
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEK-- 124
PK+ +A+ +F++D+R+ +E+NPD + IGK G KWK M+ E+K Y + A E
Sbjct: 28 PKRALSAYMFFVKDWRERIKEENPDA-AFGEIGKLMGAKWKEMSDEDKQPYVEQAEEDKV 86
Query: 125 RAEFDRAMA 133
RAE DRA A
Sbjct: 87 RAEKDRADA 95
>gi|449269345|gb|EMC80131.1| High mobility group protein B3 [Columba livia]
Length = 202
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP+I A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|224098124|ref|XP_002198052.1| PREDICTED: high mobility group protein B3 isoform 1 [Taeniopygia
guttata]
gi|326924638|ref|XP_003208532.1| PREDICTED: high mobility group protein B3-like [Meleagris
gallopavo]
gi|449498655|ref|XP_004177286.1| PREDICTED: high mobility group protein B3 isoform 2 [Taeniopygia
guttata]
Length = 202
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|397466921|ref|XP_003805186.1| PREDICTED: high mobility group protein B3 [Pan paniscus]
gi|410057106|ref|XP_001135676.3| PREDICTED: high mobility group protein B3 isoform 1 [Pan
troglodytes]
gi|426397737|ref|XP_004065063.1| PREDICTED: high mobility group protein B3 isoform 2 [Gorilla
gorilla gorilla]
gi|119619804|gb|EAW99398.1| high-mobility group box 3, isoform CRA_b [Homo sapiens]
Length = 220
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 167
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 168 KLKEKYEKDVADY---KSKGKFDGA 189
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 34 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 93
Query: 131 AMADY 135
M DY
Sbjct: 94 EMKDY 98
>gi|2285963|emb|CAA71143.1| high mobility group protein 2a [Homo sapiens]
Length = 200
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKT++ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTVSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|547652|sp|P36194.2|HMGB1_CHICK RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|391636|dbj|BAA03260.1| HMG-1 [Gallus gallus]
Length = 201
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 88 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 146
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 147 KLKEKYEKDVADY 159
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ ++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREE-HKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 72
Query: 131 AMADY 135
M DY
Sbjct: 73 EMKDY 77
>gi|300122042|emb|CBK22616.2| unnamed protein product [Blastocystis hominis]
Length = 224
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 62 LDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIA 121
+D PKKP + + + + R+ +++NP++K + I K GEKWK ++ EEK Y D
Sbjct: 21 VDPDKPKKPLSGYMRYCNEQREQVKKENPELK-LTEISKVLGEKWKELSEEEKKPYQDAY 79
Query: 122 TEKRAEFDRAMADYIKRKENGK 143
+ ++D M +Y K GK
Sbjct: 80 EADKEKYDLQMEEYKKTHPTGK 101
>gi|52345682|ref|NP_001004888.1| high mobility group box 3 [Xenopus (Silurana) tropicalis]
gi|49522962|gb|AAH75290.1| MGC88931 protein [Xenopus (Silurana) tropicalis]
gi|89267024|emb|CAJ81774.1| high-mobility group box 3 [Xenopus (Silurana) tropicalis]
Length = 202
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y + A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDGEKQPYNNKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ YF++ R+ +++NP+I A K C E+WKTM+ +EK K+ D+A + +DR
Sbjct: 14 SAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSAKEKSKFDDLAKADKVRYDR 73
Query: 131 AMADY 135
M D+
Sbjct: 74 EMKDF 78
>gi|410256410|gb|JAA16172.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|410219302|gb|JAA06870.1| high mobility group box 3 [Pan troglodytes]
Length = 199
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|296236643|ref|XP_002763412.1| PREDICTED: high mobility group protein B3-like [Callithrix jacchus]
Length = 203
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|167773205|gb|ABZ92037.1| high-mobility group box 3 [synthetic construct]
Length = 198
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|109132602|ref|XP_001091672.1| PREDICTED: high mobility group protein B3-like isoform 3 [Macaca
mulatta]
gi|109132606|ref|XP_001091441.1| PREDICTED: high mobility group protein B3-like isoform 1 [Macaca
mulatta]
gi|402911729|ref|XP_003918461.1| PREDICTED: high mobility group protein B3 isoform 1 [Papio anubis]
gi|402911731|ref|XP_003918462.1| PREDICTED: high mobility group protein B3 isoform 2 [Papio anubis]
Length = 201
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|71143137|ref|NP_005333.2| high mobility group protein B3 [Homo sapiens]
gi|426397735|ref|XP_004065062.1| PREDICTED: high mobility group protein B3 isoform 1 [Gorilla
gorilla gorilla]
gi|426397739|ref|XP_004065064.1| PREDICTED: high mobility group protein B3 isoform 3 [Gorilla
gorilla gorilla]
gi|85701353|sp|O15347.4|HMGB3_HUMAN RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|47124341|gb|AAH70482.1| HMGB3 protein [Homo sapiens]
gi|117645316|emb|CAL38124.1| hypothetical protein [synthetic construct]
gi|117646384|emb|CAL38659.1| hypothetical protein [synthetic construct]
gi|119619803|gb|EAW99397.1| high-mobility group box 3, isoform CRA_a [Homo sapiens]
gi|410351655|gb|JAA42431.1| high mobility group box 3 [Pan troglodytes]
gi|410351657|gb|JAA42432.1| high mobility group box 3 [Pan troglodytes]
Length = 200
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|1085210|pir||S48708 high-mobility-group-1 protein - trout
Length = 204
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+P +AFF F DFR + + P + S+ + K GEKW +T
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLT 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E+KV Y A++ + ++++ + Y + GKV S
Sbjct: 137 AEDKVPYEKKASKLKEKYEKDITAY---RNKGKVPVS 170
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCRIEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLA 63
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M YI
Sbjct: 64 KLDKVRYEREMRSYI 78
>gi|395754558|ref|XP_002832281.2| PREDICTED: high mobility group protein B3 isoform 2 [Pongo abelii]
Length = 199
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|185135647|ref|NP_001118186.1| high mobility group-T protein [Oncorhynchus mykiss]
gi|123382|sp|P07746.2|HMGT_ONCMY RecName: Full=High mobility group-T protein; Short=HMG-T; AltName:
Full=HMG-T1; Short=HMG-1
gi|64328|emb|CAA26500.1| unnamed protein product [Oncorhynchus mykiss]
Length = 204
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+P +AFF F DFR + + P + S+ + K GEKW +T
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLT 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E+KV Y A+ + ++++ + Y + GKV S
Sbjct: 137 AEDKVPYEKKASRLKEKYEKDITAY---RNKGKVPVS 170
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLA 63
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M YI
Sbjct: 64 KLDKVRYEREMRSYI 78
>gi|409075858|gb|EKM76234.1| hypothetical protein AGABI1DRAFT_16670, partial [Agaricus bisporus
var. burnettii JB137-S8]
gi|426193694|gb|EKV43627.1| hypothetical protein AGABI2DRAFT_56560, partial [Agaricus bisporus
var. bisporus H97]
Length = 106
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D K PK+ +A+ +F +D+R+ + +NP+ +GK G KWK M EEK Y +
Sbjct: 17 KKDPKAPKRALSAYMFFSQDWRERIKTENPEA-GFGEVGKLLGAKWKEMDEEEKKPYVEQ 75
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENSEED 150
AT + ++ A Y K++ ++ EED
Sbjct: 76 ATADKTRAEKEKASYDSGKKSASGDDEEED 105
>gi|609551|gb|AAA58771.1| HMG-1 [Oncorhynchus mykiss]
Length = 204
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+P +AFF F DFR + + P + S+ + K GEKW +T
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLT 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E+KV Y A++ + ++++ + Y + GKV S
Sbjct: 137 AEDKVPYEKKASKLKEKYEKDITAY---RNKGKVPVS 170
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLA 63
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M YI
Sbjct: 64 KLDKVRYEREMRSYI 78
>gi|328856362|gb|EGG05484.1| hypothetical protein MELLADRAFT_31192 [Melampsora larici-populina
98AG31]
Length = 82
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +A+ +F +D+R+ + +NP++ S IG+ G KWK++ EEK Y D+A
Sbjct: 9 DPNAPKRPLSAYMFFSQDWRERIKTENPEV-SFGEIGRLLGLKWKSLGEEEKKPYEDMAC 67
Query: 123 EKRAEFDRAMADY 135
+ + A+Y
Sbjct: 68 RDKKRHETEKAEY 80
>gi|401402785|ref|XP_003881334.1| high mobility group protein, related [Neospora caninum Liverpool]
gi|325115746|emb|CBZ51301.1| high mobility group protein, related [Neospora caninum Liverpool]
Length = 94
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 53 TKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTY 111
T +KK K D PK+P +AF +F +D R+ +NP++KS A +GK GE W ++
Sbjct: 6 TIVKKTKAKKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSD 65
Query: 112 EEKVKYYDIATEKRAEFDRAMADY 135
+K Y A +A ++R M Y
Sbjct: 66 AQKKPYESKAVADKARYEREMIAY 89
>gi|403305854|ref|XP_003943467.1| PREDICTED: high mobility group protein B3 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK ++ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSEFDEMAKADKVCYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|67484144|ref|XP_657292.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474548|gb|EAL51913.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 114
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PPT +F +L + R +E++PDI+ I K E+WK + EEK +Y A +
Sbjct: 29 PKRPPTPYFIYLNEHRASIKEEHPDIR-FTEISKVASEQWKALGEEEKKEYQTKADAAKE 87
Query: 127 EFDRAMADYIKRKE 140
++ + M Y +K+
Sbjct: 88 QYKKDMEKYNNKKQ 101
>gi|226443200|ref|NP_001140081.1| High mobility group-T protein [Salmo salar]
gi|223649418|gb|ACN11467.1| High mobility group-T protein [Salmo salar]
Length = 345
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F DFR + + P + S+ + K GEKW +T E+KV Y A
Sbjct: 232 DPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLTAEDKVPYEKKAA 290
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ + Y + GKV S
Sbjct: 291 KLKEKYEKDITAY---RNKGKVPVS 312
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 146 DPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLA 205
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M YI
Sbjct: 206 KLDKVRYEREMRSYI 220
>gi|334348387|ref|XP_003342057.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Monodelphis domestica]
Length = 208
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
DS PK PP+ FF F +FR + NP I S+ + K GE W ++ EK Y + A
Sbjct: 89 DSNAPKHPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYNNKAA 147
Query: 123 EKRAEFDRAMAD 134
+ + ++++ +AD
Sbjct: 148 KLKEKYEKDVAD 159
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ + ++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFLVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKLRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|307205080|gb|EFN83551.1| High mobility group protein 20A [Harpegnathos saltator]
Length = 326
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+K D+ PK+P T +F FL D R+ + ++P + S I K +W T+ ++K
Sbjct: 70 KRKKTPRDATAPKQPLTGYFRFLNDRREKARHEHPSL-SFADITKLLAAEWSTLPSDQKQ 128
Query: 116 KYYDIATEKRAEFDRAMADY 135
+Y D A + + ++R ++DY
Sbjct: 129 QYLDAAEQDKERYNREISDY 148
>gi|448530095|ref|XP_003869985.1| Nhp6a non-histone chromatin component [Candida orthopsilosis Co
90-125]
gi|354547725|emb|CCE44460.1| hypothetical protein CPAR2_402610 [Candida parapsilosis]
gi|380354339|emb|CCG23854.1| Nhp6a non-histone chromatin component [Candida orthopsilosis]
Length = 93
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 54 KLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEE 113
K K +K D PK+ +A+ +F + R + +NP I S +GKA G+KWK ++ E+
Sbjct: 7 KRKVSRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKALGDKWKALSAED 65
Query: 114 KVKYYDIATEKRAEFDRAMADYIKRKEN 141
KV Y + A + +++ A+Y K+ N
Sbjct: 66 KVPYENKAEADKKRYEKEKAEYAKKNSN 93
>gi|171848939|pdb|2YQI|A Chain A, Solution Structure Of The Second Hmg-Box Domain From High
Mobility Group Protein B3
Length = 81
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A + +
Sbjct: 10 PKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKE 68
Query: 127 EFDRAMADY 135
++++ +ADY
Sbjct: 69 KYEKDVADY 77
>gi|401412468|ref|XP_003885681.1| High mobility group protein 1, related [Neospora caninum Liverpool]
gi|325120101|emb|CBZ55655.1| High mobility group protein 1, related [Neospora caninum Liverpool]
Length = 98
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 46 ISAKRVTTKL---KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKS-MRAIGKA 101
++ K+VT K KKK K D PKKP +++ +F +D R ++ P +KS + +GK
Sbjct: 1 MAPKKVTKKGAEGKKKRVKKDPNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKM 60
Query: 102 CGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRK 139
GE+W ++ +K+ Y A +++ + R M+ Y K+K
Sbjct: 61 IGEEWAKLSSSQKLTYQKKAEQEKIRYQREMSLYNKKK 98
>gi|443895134|dbj|GAC72480.1| HMG box-containing protein [Pseudozyma antarctica T-34]
Length = 99
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 45 SISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGE 104
S S ++ TTK KK D PK+P +A+ +F +D R+ ++ NP+ +G+ G
Sbjct: 11 STSTQKRTTKSKK-----DPAAPKRPLSAYMFFSQDHRERVKQANPEA-GFGDVGRLLGA 64
Query: 105 KWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRK 139
KWK M+ EK Y D+AT +A + A Y KR+
Sbjct: 65 KWKEMSEAEKKPYNDMATRDKARAEAEKAAYSKRR 99
>gi|448516014|ref|XP_003867470.1| Nhp10 protein [Candida orthopsilosis Co 90-125]
gi|380351809|emb|CCG22032.1| Nhp10 protein [Candida orthopsilosis]
Length = 335
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 28 PTRHSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGF-- 85
P +++ + ++ +A L K + D +PK+P A+ F E ++
Sbjct: 127 PEARNLINNIAGASSAENATATSTNPALAKNPKYRDPDLPKRPTNAYLLFCEQEKERLRQ 186
Query: 86 -QEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKV 144
Q+++P+ + R + KA E WK ++ E++ +Y + E R + + MA+Y ++KE
Sbjct: 187 QQQEDPE-NNTRDLSKAMTEAWKALSEEDRKPFYKLYEEDRVRYQKEMAEYNQKKEAEME 245
Query: 145 ENSEEDSEFDEYE 157
+ +++ E D E
Sbjct: 246 QAGDDEGEVDTNE 258
>gi|403295522|ref|XP_003938690.1| PREDICTED: high mobility group protein B3-like [Saimiri boliviensis
boliviensis]
Length = 202
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D K PK +A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ +
Sbjct: 3 KCDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M DY
Sbjct: 63 MAKADKVRYDREMKDY 78
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K+PP+ FF F +FR + NP I S+ + K GE W + EK Y A
Sbjct: 89 DPNASKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
>gi|71024155|ref|XP_762307.1| hypothetical protein UM06160.1 [Ustilago maydis 521]
gi|46101812|gb|EAK87045.1| hypothetical protein UM06160.1 [Ustilago maydis 521]
Length = 534
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 47 SAKRVTTKLKKKHEKL-DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEK 105
+AK+++ K+K ++L D PK+PP+A+ F + R+ ++++P + +GK E
Sbjct: 276 AAKKMSKLQKRKEKRLRDPDAPKRPPSAYLLFQNEVRQEIRKKHPGMPYSEVLGKV-SEA 334
Query: 106 WKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
WK +T +++ Y D TE A +++ D+
Sbjct: 335 WKALTDDQRRVYQDKTTENMATWNQQKKDH 364
>gi|388511193|gb|AFK43658.1| unknown [Lotus japonicus]
Length = 92
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 78 LEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
+ +FR F++ NP+ KS+ A+GKA G KWK+MT EK Y A + + E+++ + Y
Sbjct: 1 MSEFRTQFKKDNPNNKSVAAVGKAAGSKWKSMTDAEKAPYVARAEKAKEEYEKTLRAY 58
>gi|52219178|ref|NP_001004674.1| high-mobility group box 2b [Danio rerio]
gi|51858850|gb|AAH81415.1| High-mobility group box 2 [Danio rerio]
gi|182889482|gb|AAI65150.1| Hmgb2 protein [Danio rerio]
Length = 214
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D PK +A+ +F++ R + ++PD+ + K C E+WK++ +KVK+ D
Sbjct: 3 KGDVNKPKGKTSAYAFFVQTCRDEHKRKSPDVPVNFSEFSKKCSERWKSLNASDKVKFED 62
Query: 120 IATEKRAEFDRAMADYIKRKENGKVENSEED 150
+A + +DR M Y+ K GK ++D
Sbjct: 63 MAKADKVRYDREMKTYVPPKGVGKTGRKKKD 93
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+PP+AFF F ++R + ++P++ ++ I K GE W + +++ +
Sbjct: 91 KKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNL-TIGEIAKKLGELWSKQSSKDRAPFEQK 149
Query: 121 ATEKRAEFDRAMADY 135
A + R ++++ +A Y
Sbjct: 150 AGKLREKYEKEVAAY 164
>gi|384500553|gb|EIE91044.1| hypothetical protein RO3G_15755 [Rhizopus delemar RA 99-880]
Length = 323
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 58 KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
+H K D+ P KPP+A+ F D R ++QN KS + K G++WK++ EEK Y
Sbjct: 175 RHPKPDANAPFKPPSAYVMFSNDTRAELKQQN---KSFTDLAKIIGDRWKSIPTEEKNAY 231
Query: 118 YDIATEKRAEFDRAMADYIK 137
A + R E+ + + +Y K
Sbjct: 232 ERNALKAREEYLKRVEEYQK 251
>gi|427787117|gb|JAA59010.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 208
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 54 KLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEE 113
K KK+ D PK+P +AFF+F D R +++NPD S+ + K G +W + +
Sbjct: 83 KSKKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQENPDS-SVGEVAKELGRRWNEVGDDV 141
Query: 114 KVKYYDIATEKRAEFDRAMADYIKRKENG 142
K KY +A + +A +++ + Y +K G
Sbjct: 142 KAKYEGLAAKDKARYEKELKAYKGKKPKG 170
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ ++++P+ + A K C E+WKTM+ EK +++ +A + + FD
Sbjct: 12 SAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSDGEKKRFHQMADKDKKRFDT 71
Query: 131 AMADY 135
MADY
Sbjct: 72 EMADY 76
>gi|444725503|gb|ELW66067.1| Trem-like transcript 1 protein [Tupaia chinensis]
Length = 668
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ + K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 511 SAYTFFVQTCREKHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 570
Query: 131 AMADY 135
M DY
Sbjct: 571 EMKDY 575
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+ FF F +FR + NP I S+ + K GE W ++ EK Y
Sbjct: 586 DPNAPKRRPSVFFLFCSEFRLKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYITNGA 644
Query: 123 EKRAEFDRAMA 133
+ A+ R A
Sbjct: 645 KGPAKVARIKA 655
>gi|221221482|gb|ACM09402.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+P +AFF F DFR + + P + S+ + K GEKW +T
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLT 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E+KV Y A + ++++ + Y + GKV S
Sbjct: 137 AEDKVPYEKKAARLKEKYEKDITAY---RNKGKVPVS 170
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R+ ++++P+ + K C E+W+TM+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDLA 63
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M YI
Sbjct: 64 KLDKMRYEREMRSYI 78
>gi|3342575|gb|AAC27652.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+G ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREGHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|355762621|gb|EHH62030.1| hypothetical protein EGM_20207 [Macaca fascicularis]
Length = 201
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W + EK Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVPKKLGEMWNNLNDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|213982973|ref|NP_001135648.1| uncharacterized protein LOC100216207 [Xenopus (Silurana)
tropicalis]
gi|156914901|gb|AAI52619.1| Hmgb2 protein [Danio rerio]
gi|197245630|gb|AAI68534.1| Unknown (protein for MGC:181066) [Xenopus (Silurana) tropicalis]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D PK +A+ +F++ R + + PD+ + K C E+WK++ +KVK+ D
Sbjct: 3 KGDVNKPKGKTSAYAFFVQTCRDEHKRKGPDVPVNFSEFSKKCSERWKSLNASDKVKFED 62
Query: 120 IATEKRAEFDRAMADYIKRKENGKVENSEED 150
+A + +DR M Y+ K GK ++D
Sbjct: 63 MAKADKVRYDREMKTYVPPKGVGKTGRKKKD 93
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+PP+AFF F ++R + ++P++ ++ I K GE W + +++ +
Sbjct: 91 KKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNL-TIGEIAKKLGELWSKQSSKDRAPFEQK 149
Query: 121 ATEKRAEFDRAMADY 135
A + R ++++ +A Y
Sbjct: 150 AGKLREKYEKEVAAY 164
>gi|159476440|ref|XP_001696319.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158282544|gb|EDP08296.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 179
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP T+F YF R+ + +NP I + +GK GEKWK ++ ++K +Y + A
Sbjct: 57 DPNAPKKPLTSFMYFSNAIRESVKSENPGI-AFGEVGKVIGEKWKGLSADDKKEYDEKAA 115
Query: 123 EKRAEFDRAMADY 135
+ + + + M Y
Sbjct: 116 KDKERYQKEMESY 128
>gi|156545539|ref|XP_001604334.1| PREDICTED: hypothetical protein LOC100118045 [Nasonia vitripennis]
Length = 223
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 19/93 (20%)
Query: 62 LDSKMPKK--PPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYD 119
L++ PK+ AF F++DF++ + PD+ + R I + CGE+WK+MT E+K Y
Sbjct: 106 LNNIQPKRWRSANAFVNFVQDFKQDY----PDMITGRNIFQTCGERWKSMTDEQKQPYI- 160
Query: 120 IATEKRAEFDRAMADYIKRKENGKV-ENSEEDS 151
A A+ +KR +N K+ E+S++ S
Sbjct: 161 -----------AAANTVKRLKNRKIGESSDQQS 182
>gi|213513415|ref|NP_001133101.1| high mobility group protein B1 [Salmo salar]
gi|197631937|gb|ACH70692.1| high-mobility group box 1 [Salmo salar]
Length = 203
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+P +AFF F DFR + + P + S+ + K GEKW +T
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLT 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E+KV Y A + + ++++ + Y + GKV S
Sbjct: 137 AEDKVPYEKKAAKLKEKYEKDITAY---RNKGKVPVS 170
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R+ ++++P+ + K C E+W+TM+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDLA 63
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M YI
Sbjct: 64 KLDKVRYEREMRSYI 78
>gi|196003770|ref|XP_002111752.1| hypothetical protein TRIADDRAFT_23407 [Trichoplax adhaerens]
gi|190585651|gb|EDV25719.1| hypothetical protein TRIADDRAFT_23407, partial [Trichoplax
adhaerens]
Length = 257
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
DS PK P T + FL D R+ + +NPD+ I K G KW ++ EK +Y D A
Sbjct: 12 DSNAPKAPHTGYVRFLNDSREKVRAENPDL-PFSEITKILGTKWSSLPISEKQRYLDEAE 70
Query: 123 EKRAEFDRAMADY 135
+ + + + + DY
Sbjct: 71 KDKERYLKELEDY 83
>gi|291415373|ref|XP_002723927.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 27 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 86
Query: 120 IATEKRAEFDRAMADYI 136
+A ++A +DR M +Y+
Sbjct: 87 MAKSEKARYDREMKNYV 103
>gi|395844161|ref|XP_003794831.1| PREDICTED: uncharacterized protein LOC100953571 [Otolemur
garnettii]
Length = 357
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK PP+ FF F +FR + NP I S+ + K GE W +++ EK Y
Sbjct: 253 KKDPNAPKTPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNSLSDSEKQPYITK 311
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENS 147
A + + + ++ +ADY K GK + +
Sbjct: 312 AAQLKEKDEKDVADY---KSKGKFDGA 335
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K PK A+ +F++ R+ +++NP++ ++ K C E+WK + +EK K +
Sbjct: 170 KRDPKKPKGKMPAYAFFVQTCREEHKKKNPEVPVNLAEFSKKCSERWKATSGKEKSKSDE 229
Query: 120 IATEKRAEFDRAMADY 135
+A + DR + DY
Sbjct: 230 MAKADKVCCDREVKDY 245
>gi|365759088|gb|EHN00901.1| Abf2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 185
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+F FL+D R F ++NP ++ I K GEKW+T+ + K KY E +
Sbjct: 45 PKRPTSAYFLFLQDHRSQFAKENPTLRP-SEISKIAGEKWQTLKSDIKDKYISQRKELYS 103
Query: 127 EFDRA 131
E+ +A
Sbjct: 104 EYQKA 108
>gi|225703866|gb|ACO07779.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F DFR + ++P + S+ K G W + EEK Y A
Sbjct: 90 DPNAPKRPPSAFFIFCADFRAKIKSEHPGL-SIGDTAKKLGVMWNSSAAEEKKPYEKKAA 148
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ ++D+ +A Y + NG+V+ +
Sbjct: 149 TLKEKYDKDIASY---RTNGRVDTA 170
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R ++++P+ + K C E+WK M+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++R M +YI
Sbjct: 64 KQDKVRYEREMKNYI 78
>gi|221221922|gb|ACM09622.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F DFR + ++P + S+ K G W + EEK Y A
Sbjct: 90 DPNAPKRPPSAFFIFCADFRAKIKSEHPGL-SIGDTAKKLGVMWNSSAAEEKKPYEKKAA 148
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ ++D+ +A Y + NG+V+ +
Sbjct: 149 TLKEKYDKDIASY---RTNGRVDTA 170
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R ++++P+ + K C E+WK M+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++R M +YI
Sbjct: 64 KQDKVRYEREMKNYI 78
>gi|221219434|gb|ACM08378.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F DFR + ++P + S+ K G W + EEK Y A
Sbjct: 90 DPNAPKRPPSAFFIFCADFRAKIKSEHPGL-SIGDTAKKLGVMWNSSAAEEKKPYEKKAA 148
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ ++D+ +A Y + NG+V+ +
Sbjct: 149 TLKEKYDKDIASY---RTNGRVDTA 170
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R ++++P+ + K C E+WK M+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++R M +YI
Sbjct: 64 KQDKVRYEREMKNYI 78
>gi|401838192|gb|EJT41931.1| ABF2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 185
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+F FL+D R F ++NP ++ I K GEKW+T+ + K KY E +
Sbjct: 45 PKRPTSAYFLFLQDHRSQFAKENPTLRP-SEISKIAGEKWQTLKSDIKDKYISQRKELYS 103
Query: 127 EFDRA 131
E+ +A
Sbjct: 104 EYQKA 108
>gi|225704132|gb|ACO07912.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F DFR + ++P + S+ K G W + EEK Y A
Sbjct: 90 DPNAPKRPPSAFFIFCADFRAKIKSEHPGL-SIGDTAKKLGVMWNSSAAEEKKPYEKKAA 148
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ ++D+ +A Y + NG+V+ +
Sbjct: 149 TLKEKYDKDIASY---RTNGRVDTA 170
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R ++++P+ A K C E+WK M+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++ M +YI
Sbjct: 64 KQDKVRYEGEMKNYI 78
>gi|328874899|gb|EGG23264.1| PHD zinc finger-containing protein [Dictyostelium fasciculatum]
Length = 758
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK TAFF++L D R+ + P++ S+ I K G+KW+ +T +EK Y+ A + R
Sbjct: 361 PKTNVTAFFHYLNDNRETEKRAQPEL-SLADISKVLGQKWRVLTDDEKKPYHTKAADDRV 419
Query: 127 EFDRAMADYIKRKENG 142
FD + +Y K+ ++
Sbjct: 420 RFDADIIEYKKQIQDA 435
>gi|23394916|gb|AAN31640.1|AF484963_1 high mobility group protein 1 [Biomphalaria glabrata]
Length = 215
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 58 KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
K + +D PK+PPTA+F FL D+R + N I+ + + K GE+W++++ E+K Y
Sbjct: 91 KGKSVDPNKPKRPPTAYFLFLADYR--IRMANKGIEH-KELLKMAGEEWRSLSNEDKKPY 147
Query: 118 YDIATEKRAEFDRAMADYIKRKENG 142
A E+ +++ AM +Y RK G
Sbjct: 148 EKKALEESKKYESAMTEY--RKTGG 170
>gi|12838247|dbj|BAB24141.1| unnamed protein product [Mus musculus]
Length = 181
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D PK +++ +F+ +FR F+EQ P+ + + C EKW++++ EK KY +A
Sbjct: 5 DQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALA 64
Query: 122 TEKRAEFDRAMADYI 136
+A + + M +YI
Sbjct: 65 EHDKARYQQEMMNYI 79
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K P+KPP++F F D +++NPD ++ + KA G+ W T EK Y A
Sbjct: 89 DPKAPRKPPSSFLLFSRDHYAMLKQENPDWTVVQ-VAKAAGKMWSTTDEAEKKPYEQKAA 147
Query: 123 EKRAEF 128
RA++
Sbjct: 148 LMRAKY 153
>gi|387914724|gb|AFK10971.1| high mobility group box 1 [Callorhinchus milii]
Length = 226
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F R +E+ P + S+ I K GEKW M EEK+ Y A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGL-SIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 123 EKRAEFDRAMADYIKRKENGKVEN 146
+ + ++ + +A Y + + V+N
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKN 189
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 46 ISAKRVTTK---LKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPD-IKSMRAIGKA 101
+S +R TT +K+K + D K P+ T+ F++ R+ ++++P+ + S K
Sbjct: 1 MSDRRATTTEPAIKRKMAR-DPKKPRGRLTSHALFVQTCREEHKKKHPEKVVSFTEFSKK 59
Query: 102 CGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYI 136
C E+WKTM+ +EK K+ +++ E + ++ M DY+
Sbjct: 60 CSERWKTMSAKEKSKFEELSKEDKKRYESEMKDYV 94
>gi|221221148|gb|ACM09235.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+P +AFF F DFR + + P + S+ + K GEKW +T
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLT 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E+KV Y A + + ++++ + Y + GKV S
Sbjct: 137 AEDKVPYEKKAAKLKEKYEKDITAY---RNKGKVPVS 170
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R+ ++++P+ + K C E+W+TM+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDLA 63
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M YI
Sbjct: 64 KLDKVRYEREMRSYI 78
>gi|148229870|ref|NP_001080585.1| high mobility group box 3 [Xenopus laevis]
gi|27882654|gb|AAH44009.1| Hmgb3-prov protein [Xenopus laevis]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I ++ + K GE W ++ EK Y +
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-TIGDVAKKLGEMWNNLSDSEKQPYNNKGA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 148 KLKEKYEKDVADY 160
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ YF++ R+ +++NP+I + K C E+W+ M+ +EK K+ D+A + +DR
Sbjct: 14 SAYAYFVQTCREEHKKKNPEIPVNFSEFSKKCSERWRGMSGKEKSKFDDLAKADKVRYDR 73
Query: 131 AMADY 135
M D+
Sbjct: 74 EMQDF 78
>gi|342319487|gb|EGU11435.1| Non-histone chromosomal protein [Rhodotorula glutinis ATCC 204091]
Length = 142
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 47 SAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDI------KSMRAIGK 100
S R T K D PK+P +A+ +F +D R +E+NPD+ +S+ IGK
Sbjct: 5 SKPRATKAATGGRAKKDPNAPKRPLSAYMHFSQDQRSVVKEENPDVTFVGHCESIGEIGK 64
Query: 101 ACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
G KWK + +E+ Y + A+ ++ +++ A Y
Sbjct: 65 ILGAKWKELPEDERKPYEEKASADKSRYEKEKAAY 99
>gi|410928771|ref|XP_003977773.1| PREDICTED: TOX high mobility group box family member 4-B-like
[Takifugu rubripes]
Length = 684
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Query: 12 SQSSSASNLKMVLRKRPTRHSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPP 71
S SSSA+ L M + P + G K+ +S V KK +K D P+KP
Sbjct: 244 SLSSSATPLYMSSQSVPMSSTTTVKRGGAKQSAPLSVPGVVGN-KKGRKKKDPNEPQKPV 302
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRA 131
+A+ F D + + QNP S + K W ++ E+K Y + E+ +A
Sbjct: 303 SAYALFFRDTQAAIKGQNPS-ASFGEVSKIVASMWDSLAEEQKQVYKRKTEAAKKEYLKA 361
Query: 132 MADY 135
+A Y
Sbjct: 362 LAAY 365
>gi|223646906|gb|ACN10211.1| High mobility group-T protein [Salmo salar]
gi|223672769|gb|ACN12566.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+P +AFF F DFR + + P + S+ + K GEKW +T
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLT 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E+KV Y A + + ++++ + Y + GKV S
Sbjct: 137 AEDKVPYEKKAAKLKEKYEKDITAY---RNKGKVPVS 170
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLA 63
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M YI
Sbjct: 64 KLDKVRYEREMRSYI 78
>gi|392876858|gb|AFM87261.1| high mobility group protein [Callorhinchus milii]
gi|392878442|gb|AFM88053.1| high mobility group protein [Callorhinchus milii]
gi|392880194|gb|AFM88929.1| high mobility group protein [Callorhinchus milii]
gi|392881188|gb|AFM89426.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F R +E+ P + S+ I K GEKW M EEK+ Y A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGL-SIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 123 EKRAEFDRAMADYIKRKENGKVEN 146
+ + ++ + +A Y + + V+N
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKN 189
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 46 ISAKRVTTK---LKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPD-IKSMRAIGKA 101
+S +R TT +K+K + D K P+ T++ F++ R+ ++++P+ + S K
Sbjct: 1 MSDRRATTTEPAIKRKMAR-DPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKK 59
Query: 102 CGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYI 136
C E+WKTM+ +EK K+ +++ E + ++ M DY+
Sbjct: 60 CSERWKTMSAKEKSKFEELSKEDKKRYESEMKDYV 94
>gi|384500858|gb|EIE91349.1| hypothetical protein RO3G_16060 [Rhizopus delemar RA 99-880]
Length = 316
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 28 PTRHSVVAAVGIEK-EGKSISAKRVTTKLKKK---HEKLDSKMPKKPPTAFFYFLEDFRK 83
P+ ++ A G+ E +++++ V K+K H K D+ P KPP+A+ F D R
Sbjct: 127 PSAGTMSAQSGMSSTEEEAVTSDNVHRLWKRKYHRHPKPDTNAPVKPPSAYVMFSNDIRA 186
Query: 84 GFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIK 137
++QN +S + K G++WK+++ EEK Y A + R ++ + + +Y K
Sbjct: 187 ELKQQN---RSFTDLAKIIGDRWKSISAEEKELYETKALKAREKYLKEIEEYQK 237
>gi|412985385|emb|CCO18831.1| CG4797 [Bathycoccus prasinos]
Length = 669
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
KKK EK D PK+P + + F + R +E+NPD S+ + K G +WK++T EEKV
Sbjct: 570 KKKKEK-DPNAPKRPLSTYMIFSAEMRAKVKEENPDF-SITDVAKELGVRWKSVTDEEKV 627
Query: 116 KYYDIA 121
KY ++A
Sbjct: 628 KYEELA 633
>gi|392879586|gb|AFM88625.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F R +E+ P + S+ I K GEKW M EEK+ Y A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGL-SIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 123 EKRAEFDRAMADYIKRKENGKVEN 146
+ + ++ + +A Y + + V+N
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKN 189
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 46 ISAKRVTTK---LKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPD-IKSMRAIGKA 101
+S +R TT +K+K + D K P+ T++ F++ R+ ++++P+ + S K
Sbjct: 1 MSDRRATTTEPAIKRKMAR-DPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKK 59
Query: 102 CGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYI 136
C E+WKTM+ +EK K+ +++ E + ++ M DY+
Sbjct: 60 CSERWKTMSAKEKSKFEELSKEDKKRYESEMKDYV 94
>gi|219116576|ref|XP_002179083.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409850|gb|EEC49781.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 75
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKK T+FFYFL + R +++NPD+ S +GK GE ++ ++ +K KY +A
Sbjct: 2 DPNAPKKAMTSFFYFLNEMRPKIKQENPDM-SFGELGKKAGELFRALSTNQKEKYEKMAK 60
Query: 123 EKRAEFDRAMADY 135
+ F M+ Y
Sbjct: 61 SDKLRFKEEMSKY 73
>gi|392876654|gb|AFM87159.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F R +E+ P + S+ I K GEKW M EEK+ Y A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGL-SIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 123 EKRAEFDRAMADYIKRKENGKVEN 146
+ + ++ + +A Y + + V+N
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKN 189
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 46 ISAKRVTTK---LKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPD-IKSMRAIGKA 101
+S +R TT +K+K + D K P+ T++ F++ R+ ++++P+ + S K
Sbjct: 1 MSDRRATTTEPAIKRKMAR-DPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKK 59
Query: 102 CGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYI 136
C E WKTM+ +EK K+ +++ E + ++ M DY+
Sbjct: 60 CSEGWKTMSAKEKSKFEELSKEDKKRYESEMKDYV 94
>gi|392884154|gb|AFM90909.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F R +E+ P + S+ I K GEKW M EEK+ Y A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGL-SIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 123 EKRAEFDRAMADYIKRKENGKVEN 146
+ + ++ + +A Y + + V+N
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKN 189
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 46 ISAKRVTTK---LKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPD-IKSMRAIGKA 101
+S +R TT +K+K + D K P+ T++ F++ R+ ++++P+ + S K
Sbjct: 1 MSDRRATTTEPAIKRKMAR-DPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKK 59
Query: 102 CGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYI 136
C E+W+TM+ +EK K+ +++ E + ++ M DY+
Sbjct: 60 CSERWETMSAKEKSKFEELSKEDKKRYESEMKDYV 94
>gi|221221758|gb|ACM09540.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+P +AFF F DFR + + P + S+ + K GEKW +T
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKVETPGL-SIGDVAKKLGEKWNNLT 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E+KV Y A + + ++++ + Y + GKV S
Sbjct: 137 AEDKVPYEKKAAKLKEKYEKDITAY---RNKGKVPVS 170
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R+ ++++P+ + K C E+W+TM+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDLA 63
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M YI
Sbjct: 64 KLDKVRYEREMRSYI 78
>gi|322794517|gb|EFZ17570.1| hypothetical protein SINV_80020 [Solenopsis invicta]
Length = 322
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+K D+ P++P + +F FL D R+ + QNP + + I K +W + ++K
Sbjct: 66 KRKKAPRDATAPRQPLSGYFLFLNDRREKVRNQNPSL-TFTEITKLLAAEWSKLPIDQKQ 124
Query: 116 KYYDIATEKRAEFDRAMADY 135
Y D A + + ++R +DY
Sbjct: 125 HYLDAAEQDKERYNREFSDY 144
>gi|28279681|gb|AAH45917.1| High-mobility group box 1 [Danio rerio]
gi|182891806|gb|AAI65307.1| Hmgb1 protein [Danio rerio]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+PP+AFF F +FR +E+ P + S+ + K GE W ++
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGL-SIGDVAKRLGEMWNKIS 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKV 144
EEK Y A + + ++++ +A Y + GKV
Sbjct: 137 SEEKQPYEKKAAKLKEKYEKDIAAY---RSKGKV 167
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D P+ +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+A ++R M +YI
Sbjct: 64 KLDKARYEREMKNYI 78
>gi|42476233|ref|NP_955849.2| high mobility group protein B1 [Danio rerio]
gi|37681827|gb|AAQ97791.1| high-mobility group box 1 [Danio rerio]
gi|45595607|gb|AAH67193.1| High-mobility group box 1 [Danio rerio]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+PP+AFF F +FR +E+ P + S+ + K GE W ++
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGL-SIGDVAKRLGEMWNKIS 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKV 144
EEK Y A + + ++++ +A Y + GKV
Sbjct: 137 SEEKQPYEKKAAKLKEKYEKDIAAY---RSKGKV 167
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D P+ +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+A ++R M +YI
Sbjct: 64 KLDKARYEREMKNYI 78
>gi|326437020|gb|EGD82590.1| hypothetical protein PTSG_03243 [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
+++ +K D PKKP +A+F F E R + Q P+ + + K GE+W+ MT E+K
Sbjct: 127 RRRKKKKDPNAPKKPKSAYFVFAETRRDALRAQYPEDR-VSDTAKRTGEEWRGMTEEQKR 185
Query: 116 KYYDIATEKRAEFDRAMADY 135
+ A E + E+D+A+A+Y
Sbjct: 186 PFQLKAQELKQEYDQAVAEY 205
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D P+ T + F ++ R +Q+P+ S+ + K G +W+ +T E+K Y D+A
Sbjct: 45 DPNKPRGALTPYMCFNKEVRPAIMQQHPNA-SVTEVAKLIGAQWRQLTDEQKKPYNDMAR 103
Query: 123 EKRAEFDRAMADYI 136
R + AM +Y+
Sbjct: 104 TDRERYKEAMKNYV 117
>gi|221220042|gb|ACM08682.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+P +AFF F DFR + + P + S+ + K GEKW +T
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKVETPGL-SIGDVAKKLGEKWNNLT 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E+KV Y A + + ++++ + Y + GKV S
Sbjct: 137 AEDKVPYEKKAAKLKEKYEKDITAY---RNKGKVPVS 170
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLA 63
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M YI
Sbjct: 64 KLDKVRYEREMRSYI 78
>gi|291414887|ref|XP_002723687.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 209
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
>gi|8393536|ref|NP_058883.1| high mobility group protein B2 [Rattus norvegicus]
gi|293340790|ref|XP_001063065.2| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|293352163|ref|XP_573272.3| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|1708260|sp|P52925.2|HMGB2_RAT RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|1304193|dbj|BAA12350.1| HMG2 [Rattus norvegicus]
gi|51259308|gb|AAH78866.1| Hmgb2 protein [Rattus norvegicus]
gi|58476482|gb|AAH89854.1| Hmgb2 protein [Rattus norvegicus]
gi|77567606|gb|AAI07456.1| Hmgb2 protein [Rattus norvegicus]
gi|149032266|gb|EDL87172.1| rCG59188 [Rattus norvegicus]
Length = 210
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 LAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|417397133|gb|JAA45600.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 208
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFSEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|401415962|ref|XP_003872476.1| high mobility group protein homolog tdp-1,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322488700|emb|CBZ23947.1| high mobility group protein homolog tdp-1,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 300
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 39 IEKEGKSISAKRV--------TTKLKKKH-----EKLDSKMPKKPPTAFFYFLEDFRKGF 85
I+KE + ISA+R+ T K K K EK PK + + F+ + R+
Sbjct: 73 IQKEKEDISARRLKRERSPSGTKKSKDKESARGKEKKPDDYPKGALSPYIIFVNENREKL 132
Query: 86 QEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKR 138
+ ++PD+K+ + + G WK +T EEK +Y +A E + +DR MA YI R
Sbjct: 133 KAKHPDMKNTELLSE-MGNLWKKVTEEEKSRYQKLADEDKLRYDREMAAYIAR 184
>gi|223649496|gb|ACN11506.1| High mobility group protein B3 [Salmo salar]
Length = 207
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
KK K D PK+PP+ FF F D R + Q+P + + + K GE+W +T K
Sbjct: 83 KKGRKKDPNAPKRPPSGFFIFCADHRPKIKAQHPSL-GIGDVAKKLGEQWNNLTDATKQP 141
Query: 117 YYDIATEKRAEFDRAMADY 135
Y A + + ++ + +ADY
Sbjct: 142 YLIKANKLKDKYQKDVADY 160
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +A+ YF++ R+ ++++P+I A K C +WKTM+ +EK K+ D+A + +
Sbjct: 9 PKGKMSAYAYFVQTCREEHKKKSPEIPVNFAEFSKKCSGRWKTMSGKEKGKFEDMAKQDK 68
Query: 126 AEFDRAMADYIKRKENGK 143
+D M + + G+
Sbjct: 69 VRYDNEMMHFAPGGKKGR 86
>gi|62638360|ref|XP_574279.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|109460525|ref|XP_001074365.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ + ++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKNKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 LAKSDKARYDREMKNYV 79
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
E+++ +A Y
Sbjct: 154 EYEKDIAAY 162
>gi|164661201|ref|XP_001731723.1| hypothetical protein MGL_0991 [Malassezia globosa CBS 7966]
gi|159105624|gb|EDP44509.1| hypothetical protein MGL_0991 [Malassezia globosa CBS 7966]
Length = 97
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 50 RVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTM 109
+VTT ++ K D PK+P +A+ +F +D+R + + S+ +G+ G KWK M
Sbjct: 8 KVTTGTRRTKAKKDPAAPKRPLSAYMFFSQDWRDASKPRTLTQDSVCDVGRLLGTKWKEM 67
Query: 110 TYEEKVKYYDIAT--EKRAEFDRA 131
+ EEK Y ++A+ ++RAE ++A
Sbjct: 68 SDEEKKPYVEMASKDKERAESEKA 91
>gi|74153177|dbj|BAB27638.3| unnamed protein product [Mus musculus]
Length = 191
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 LAKSDKARYDREMKNYV 79
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSENRPKIKIEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|223994915|ref|XP_002287141.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976257|gb|EED94584.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 85
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +F YF + R ++ P IK +G A GE+W+ +T +EK KY D+A
Sbjct: 9 DPDAPKRARGSFVYFTFECRPQIMKEQPGIK-FTELGTAMGERWRALTPDEKKKYEDLAE 67
Query: 123 EKRAEFDRAMADY 135
E + FD M +Y
Sbjct: 68 EDKKRFDDEMQEY 80
>gi|6680229|ref|NP_032278.1| high mobility group protein B2 [Mus musculus]
gi|1708259|sp|P30681.3|HMGB2_MOUSE RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|609169|emb|CAA86727.1| high mobility group 2 protein [Mus musculus]
gi|12834643|dbj|BAB22988.1| unnamed protein product [Mus musculus]
gi|12842629|dbj|BAB25672.1| unnamed protein product [Mus musculus]
gi|12849395|dbj|BAB28323.1| unnamed protein product [Mus musculus]
gi|52789313|gb|AAH83108.1| High mobility group box 2 [Mus musculus]
gi|55777186|gb|AAH46759.1| High mobility group box 2 [Mus musculus]
gi|74179666|dbj|BAE22481.1| unnamed protein product [Mus musculus]
gi|74179668|dbj|BAE22482.1| unnamed protein product [Mus musculus]
gi|74226660|dbj|BAE26982.1| unnamed protein product [Mus musculus]
Length = 210
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 LAKSDKARYDREMKNYV 79
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSENRPKIKIEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|11527222|gb|AAG36939.1|AF267733_1 high mobility group protein B2 [Mus musculus]
gi|12805183|gb|AAH02050.1| High mobility group box 2 [Mus musculus]
gi|74150328|dbj|BAE32214.1| unnamed protein product [Mus musculus]
gi|148672860|gb|EDL04807.1| mCG4647 [Mus musculus]
Length = 210
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 LAKSDKARYDREMKNYV 79
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSENRPKIKIEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|401885246|gb|EJT49369.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 2479]
gi|406694772|gb|EKC98094.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 8904]
Length = 108
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 17/113 (15%)
Query: 50 RVTTKLKKKHEKLDSKMPKKPP---TAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
+V+TK KK K K P KP +A+ +F++D+R+ + +NPD ++G+ G KW
Sbjct: 3 KVSTKDDKKVAKRGKKDPNKPKRALSAYMFFVQDWRERIKSENPDA-DFGSVGRLLGAKW 61
Query: 107 KTMTYEEKVKY-------YDIATEKRAEFDRAMADYIKRKENGKVENSEEDSE 152
+ M+ EK Y D A +++AE+D A K+K + KV +EDS+
Sbjct: 62 QEMSASEKKPYEDKAQADKDRAAKEKAEYDAANG---KKKRSAKV---QEDSD 108
>gi|320168039|gb|EFW44938.1| hypothetical protein CAOG_02944 [Capsaspora owczarzaki ATCC 30864]
Length = 193
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
KK EK D PKKP TAF YF R+ + QNP +K M I G+ W + +K K
Sbjct: 6 KKDEK-DPNKPKKPTTAFMYFSNAMRERVKTQNPGLK-MTDIASVLGKLWGQLPEADKDK 63
Query: 117 YYDIATEKRAEFDRAMADYIKRKENG 142
Y +A + + +AM Y+ G
Sbjct: 64 YQTMANSDKERYAKAMDGYVAPVSTG 89
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V+T K + D PK+PP+A+ F R ++ P +M AI GE W+ +T
Sbjct: 86 VSTGGKSGKKSKDPNAPKRPPSAYICFANAVRPELRKTYPS-DTMPAISTKIGELWRQLT 144
Query: 111 YEEKVKYYDIATEKRAEFDRAMADY 135
+ K Y A + +F MA Y
Sbjct: 145 DDNKEPYNKQAEALKLKFQTEMAAY 169
>gi|330804473|ref|XP_003290219.1| hypothetical protein DICPUDRAFT_15851 [Dictyostelium purpureum]
gi|325079683|gb|EGC33272.1| hypothetical protein DICPUDRAFT_15851 [Dictyostelium purpureum]
Length = 630
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 66 MPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
+P+ +A+F+++ R+ +++NPD+ I K G KWK +T +E+ +YYD A E +
Sbjct: 232 LPRTNVSAYFHYMNINREEEKQKNPDVPP-SDISKILGAKWKQLTPDEQKEYYDRAREDK 290
Query: 126 AEFDRAMADY 135
FD M +Y
Sbjct: 291 QRFDNEMVEY 300
>gi|392351997|ref|XP_003751090.1| PREDICTED: high mobility group protein B2-like, partial [Rattus
norvegicus]
Length = 154
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 LAKSDKARYDREMKNYV 79
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPY 144
>gi|241952671|ref|XP_002419057.1| HMG-like DNA binding protein, putative; high mobility group
protein, putative; non-histone DNA-binding protein,
putative [Candida dubliniensis CD36]
gi|223642397|emb|CAX42640.1| HMG-like DNA binding protein, putative [Candida dubliniensis CD36]
Length = 312
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D +PK+P A+ F E ++ ++ +P+ + K+ E WK+++ E + YY +
Sbjct: 144 DPDLPKRPTNAYLIFCEMEKERIKQDDPNASDL---SKSMTEAWKSLSEERRRPYYKLYE 200
Query: 123 EKRAEFDRAMADYIKRKENG 142
+ R + R MA+Y ++K NG
Sbjct: 201 DDRIRYQREMAEYNQKKGNG 220
>gi|241122588|ref|XP_002403591.1| DNA-binding protein, putative [Ixodes scapularis]
gi|215493481|gb|EEC03122.1| DNA-binding protein, putative [Ixodes scapularis]
Length = 207
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 54 KLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEE 113
K KK+ D PK+P +AFF+F D R ++++PD S+ + K G +W + +
Sbjct: 83 KSKKRKRTKDPNAPKRPLSAFFWFCNDERPNVRQESPDA-SVGEVAKELGRRWNDVGDDT 141
Query: 114 KVKYYDIATEKRAEFDRAMADYIKRKENG 142
K KY +A + +A +++ + Y +K G
Sbjct: 142 KSKYEGLAAKDKARYEKELKAYKNKKTKG 170
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ ++++P + A K C E+WKTM+ EK +++ +A + + FD
Sbjct: 12 SAYAFFVQTCREEHKKKHPSENVVFAEFSKKCAERWKTMSEGEKKRFHQMADKDKKRFDS 71
Query: 131 AMADY 135
MADY
Sbjct: 72 EMADY 76
>gi|323450291|gb|EGB06173.1| hypothetical protein AURANDRAFT_72060 [Aureococcus anophagefferens]
Length = 667
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK +A+ F R +EQ+PD S+ IG+ G++WK +T ++K Y D+AT
Sbjct: 578 DPNAPKGKSSAYIMFGNAKRAEVKEQHPDF-SLGDIGRELGKRWKELTDDDKKPYVDLAT 636
Query: 123 EKRAEFDRAMADY 135
+DR MA Y
Sbjct: 637 ADAERYDREMAAY 649
>gi|442755991|gb|JAA70155.1| Putative dorsal switch protein 1 [Ixodes ricinus]
Length = 207
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 54 KLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEE 113
K KK+ D PK+P +AFF+F D R ++++PD S+ + K G +W + +
Sbjct: 83 KSKKRKRTKDPNAPKRPLSAFFWFCNDERPNVRQESPDA-SVGEVAKELGRRWNDVGDDT 141
Query: 114 KVKYYDIATEKRAEFDRAMADYIKRKENG 142
K KY +A + +A +++ + Y +K G
Sbjct: 142 KSKYEGLAAKDKARYEKELKAYKNKKTKG 170
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ ++++P + A K C E+WKTM+ EK +++ +A + + FD
Sbjct: 12 SAYAFFVQTCREEHKKKHPTENVVFAEFSKKCAERWKTMSDGEKKRFHQMADKDKKRFDS 71
Query: 131 AMADY 135
MADY
Sbjct: 72 EMADY 76
>gi|432889764|ref|XP_004075350.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 194
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V K +KK D PK+PP+AFF F DFR + ++P + S+ K GE W + +
Sbjct: 78 VPPKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSESPGL-SIGDTAKKLGEMWNSSS 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKV 144
EEK Y A + + ++D+ + Y + GKV
Sbjct: 137 AEEKQPYEKKAAKLKEKYDKDIVAY---RTKGKV 167
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D K P+ +++ YF++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++R M +Y+
Sbjct: 64 KQDKVRYEREMKNYV 78
>gi|51858856|gb|AAH81424.1| Hmgb3b protein [Danio rerio]
Length = 166
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D PK +A+ YF++ R+ ++NP + + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +A +D+ M Y
Sbjct: 63 LAKQDKARYDQEMMHY 78
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K + +K D P++PP+ FF F + R + QNP + + + K G W ++ EK
Sbjct: 83 KGRKQKKDPNAPRRPPSGFFLFCAEQRPIIKAQNPSL-GIGDVAKKLGGMWNNLSDSEKQ 141
Query: 116 KYYDIATEKRAEFDRAMADYIKRK 139
+ A + + ++ + MA Y K+K
Sbjct: 142 PFLSNADKLKDKYQKDMAFYKKKK 165
>gi|326437876|gb|EGD83446.1| hypothetical protein PTSG_04053 [Salpingoeca sp. ATCC 50818]
Length = 797
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK +A+ YF + R+ +E+ PD+ ++ I + CG W+ ++ EEK KY +A
Sbjct: 663 DPNAPKGAKSAYIYFSTEMREKIKEEKPDL-TLGQISQECGTLWRGLSDEEKKKYEKMAA 721
Query: 123 EKRAEFDRAMADY 135
E + ++ MA+Y
Sbjct: 722 EDKKRYEAEMAEY 734
>gi|431918327|gb|ELK17554.1| High mobility group protein B2 [Pteropus alecto]
Length = 209
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|426251515|ref|XP_004019467.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|426230076|ref|XP_004009107.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|426220609|ref|XP_004004507.1| PREDICTED: high mobility group protein B2 [Ovis aries]
Length = 205
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|73993609|ref|XP_543194.2| PREDICTED: high mobility group protein B2 isoform 1 [Canis lupus
familiaris]
gi|301753755|ref|XP_002912713.1| PREDICTED: high mobility group protein B2-like [Ailuropoda
melanoleuca]
gi|410956554|ref|XP_003984907.1| PREDICTED: high mobility group protein B2 [Felis catus]
gi|281338293|gb|EFB13877.1| hypothetical protein PANDA_000462 [Ailuropoda melanoleuca]
Length = 210
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|11321591|ref|NP_002120.1| high mobility group protein B2 [Homo sapiens]
gi|83035095|ref|NP_001032705.1| high mobility group protein B2 [Bos taurus]
gi|194688133|ref|NP_001124160.1| high mobility group protein B2 [Homo sapiens]
gi|194688135|ref|NP_001124161.1| high mobility group protein B2 [Homo sapiens]
gi|332820789|ref|XP_517538.3| PREDICTED: high mobility group protein B2 isoform 2 [Pan
troglodytes]
gi|332820791|ref|XP_003310651.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan
troglodytes]
gi|397505874|ref|XP_003823467.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan paniscus]
gi|397505876|ref|XP_003823468.1| PREDICTED: high mobility group protein B2 isoform 2 [Pan paniscus]
gi|397505878|ref|XP_003823469.1| PREDICTED: high mobility group protein B2 isoform 3 [Pan paniscus]
gi|410038949|ref|XP_003950520.1| PREDICTED: high mobility group protein B2 [Pan troglodytes]
gi|123374|sp|P26583.2|HMGB2_HUMAN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|109940084|sp|P40673.3|HMGB2_BOVIN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|32333|emb|CAA44395.1| HMG-2 [Homo sapiens]
gi|184236|gb|AAA58659.1| high mobility group 2 protein [Homo sapiens]
gi|12654471|gb|AAH01063.1| High-mobility group box 2 [Homo sapiens]
gi|54696426|gb|AAV38585.1| high-mobility group box 2 [Homo sapiens]
gi|61358840|gb|AAX41628.1| high-mobility group box 2 [synthetic construct]
gi|71679685|gb|AAI00020.1| HMGB2 protein [Homo sapiens]
gi|81674324|gb|AAI09756.1| High-mobility group box 2 [Bos taurus]
gi|119625163|gb|EAX04758.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|119625164|gb|EAX04759.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|123982946|gb|ABM83214.1| high-mobility group box 2 [synthetic construct]
gi|123997623|gb|ABM86413.1| high-mobility group box 2 [synthetic construct]
gi|189053183|dbj|BAG34805.1| unnamed protein product [Homo sapiens]
gi|208966462|dbj|BAG73245.1| high-mobility group box 2 [synthetic construct]
gi|296484972|tpg|DAA27087.1| TPA: high mobility group protein B2 [Bos taurus]
gi|380785663|gb|AFE64707.1| high mobility group protein B2 [Macaca mulatta]
gi|383417929|gb|AFH32178.1| high mobility group protein B2 [Macaca mulatta]
gi|383417931|gb|AFH32179.1| high mobility group protein B2 [Macaca mulatta]
gi|383417933|gb|AFH32180.1| high mobility group protein B2 [Macaca mulatta]
gi|384941858|gb|AFI34534.1| high mobility group protein B2 [Macaca mulatta]
gi|384946750|gb|AFI36980.1| high mobility group protein B2 [Macaca mulatta]
gi|410212048|gb|JAA03243.1| high-mobility group box 2 [Pan troglodytes]
gi|410212050|gb|JAA03244.1| high-mobility group box 2 [Pan troglodytes]
gi|410253758|gb|JAA14846.1| high-mobility group box 2 [Pan troglodytes]
gi|410253760|gb|JAA14847.1| high-mobility group box 2 [Pan troglodytes]
gi|410304294|gb|JAA30747.1| high-mobility group box 2 [Pan troglodytes]
gi|410304296|gb|JAA30748.1| high-mobility group box 2 [Pan troglodytes]
gi|410337391|gb|JAA37642.1| high-mobility group box 2 [Pan troglodytes]
gi|410337393|gb|JAA37643.1| high-mobility group box 2 [Pan troglodytes]
gi|410337395|gb|JAA37644.1| high mobility group box 2 [Pan troglodytes]
gi|440908504|gb|ELR58513.1| High mobility group protein B2 [Bos grunniens mutus]
gi|738688|prf||2001363A high mobility group protein 2
Length = 209
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|395840000|ref|XP_003792858.1| PREDICTED: high mobility group protein B2 [Otolemur garnettii]
Length = 209
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKNDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|395326844|gb|EJF59249.1| hypothetical protein DICSQDRAFT_109066 [Dichomitus squalens
LYAD-421 SS1]
Length = 117
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D K PK+ +A+ +F +D+R+ + +NPD IGK G KWK + EEK Y D
Sbjct: 26 KKDPKAPKRALSAYMFFSQDWRERIKAENPDA-GFGEIGKLLGAKWKELDDEEKKPYLDQ 84
Query: 121 ATEKRAEFDRAMADY 135
A +A ++ DY
Sbjct: 85 AAADKARAEQEKNDY 99
>gi|383417927|gb|AFH32177.1| high mobility group protein B2 [Macaca mulatta]
Length = 206
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|351701092|gb|EHB04011.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 215
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 96 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 154
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 155 KYEKDIAAY 163
>gi|296195168|ref|XP_002745261.1| PREDICTED: high mobility group protein B2-like isoform 2
[Callithrix jacchus]
Length = 205
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|291385922|ref|XP_002709517.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
gi|344288245|ref|XP_003415861.1| PREDICTED: high mobility group protein B2-like [Loxodonta africana]
Length = 210
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|297674678|ref|XP_002815340.1| PREDICTED: high mobility group protein B2 isoform 1 [Pongo abelii]
gi|297674680|ref|XP_002815341.1| PREDICTED: high mobility group protein B2 isoform 2 [Pongo abelii]
gi|395735499|ref|XP_003776594.1| PREDICTED: high mobility group protein B2 [Pongo abelii]
gi|402870856|ref|XP_003899415.1| PREDICTED: high mobility group protein B2 isoform 1 [Papio anubis]
gi|402870858|ref|XP_003899416.1| PREDICTED: high mobility group protein B2 isoform 2 [Papio anubis]
gi|402871219|ref|XP_003899573.1| PREDICTED: high mobility group protein B2-like [Papio anubis]
gi|90086209|dbj|BAE91657.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|332217748|ref|XP_003258025.1| PREDICTED: high mobility group protein B2 [Nomascus leucogenys]
gi|426346003|ref|XP_004040680.1| PREDICTED: high mobility group protein B2 isoform 1 [Gorilla
gorilla gorilla]
gi|426346005|ref|XP_004040681.1| PREDICTED: high mobility group protein B2 isoform 2 [Gorilla
gorilla gorilla]
gi|426346007|ref|XP_004040682.1| PREDICTED: high mobility group protein B2 isoform 3 [Gorilla
gorilla gorilla]
gi|54696428|gb|AAV38586.1| high-mobility group box 2 [Homo sapiens]
Length = 208
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|358055994|dbj|GAA98339.1| hypothetical protein E5Q_05024 [Mixia osmundae IAM 14324]
Length = 615
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 38 GIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA 97
G E + S+ KR KK+ D PK+PP+A+ F R+ ++ +P I
Sbjct: 347 GHESDDGSVPDKRA----KKRKVARDPNAPKRPPSAYLMFQNTVRQAMRDADPSIAYKDL 402
Query: 98 IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKEN 141
+ K E+W M E+K KY ++A D AM DY +K+N
Sbjct: 403 LTK-ISERWAGMPEEDKRKYSELA-------DAAMKDYRTQKDN 438
>gi|237845111|ref|XP_002371853.1| high mobility group protein [Toxoplasma gondii ME49]
gi|211969517|gb|EEB04713.1| high mobility group protein [Toxoplasma gondii ME49]
gi|221480801|gb|EEE19228.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221501467|gb|EEE27242.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 302
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 53 TKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTY 111
T +KK K D PK+P +AF +F +D R+ +NP++KS A +GK GE W ++
Sbjct: 214 TIVKKTKAKKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSD 273
Query: 112 EEKVKYYDIATEKRAEFDRAMADYIKRKENGK 143
+K Y A +A ++R M Y K+ GK
Sbjct: 274 AQKKPYESKAVADKARYEREMIAY---KKGGK 302
>gi|348525338|ref|XP_003450179.1| PREDICTED: high mobility group-T protein-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V K +KK D PK+PP+AFF F DFR + + P + S+ K GE W + +
Sbjct: 78 VPPKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSEYPGL-SIGDTAKKLGEMWNSSS 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
EEK Y A + + ++D+ D + + GKV++
Sbjct: 137 AEEKQPYEKKAAKLKEKYDK---DIVAYRTKGKVDSG 170
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D K P+ +++ YF++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++R M +Y+
Sbjct: 64 KQDKLRYEREMKNYV 78
>gi|328769557|gb|EGF79601.1| hypothetical protein BATDEDRAFT_89692 [Batrachochytrium
dendrobatidis JAM81]
Length = 99
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
KK + D PK+P +AF F ++ R +E+NPD S +GK G W+ + ++K
Sbjct: 19 KKKSRKDPDAPKRPLSAFMIFSKENRPRIREENPDA-SFGDLGKLLGAAWRELNDKDKQV 77
Query: 117 YYDIATEKRAEFDRAMADY 135
Y D A E + ++R M+ Y
Sbjct: 78 YTDKADEDKGRYEREMSTY 96
>gi|62955511|ref|NP_001017769.1| high mobility group protein B3 [Danio rerio]
gi|62202670|gb|AAH93186.1| High-mobility group box 3b [Danio rerio]
gi|182890656|gb|AAI64996.1| Hmgb3b protein [Danio rerio]
Length = 198
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D PK +A+ YF++ R+ ++NP + + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +A +D+ M Y
Sbjct: 63 LAKQDKARYDQEMMHY 78
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K + +K D P++PP+ FF F + R + QNP + + + K G W ++ EK
Sbjct: 83 KGRKQKKDPNAPRRPPSGFFLFCAEQRPIIKAQNPSL-GIGDVAKKLGGMWNNLSDSEKQ 141
Query: 116 KYYDIATEKRAEFDRAMADY 135
+ A + + ++ + MA Y
Sbjct: 142 PFLSNADKLKDKYQKDMAFY 161
>gi|74185387|dbj|BAE30167.1| unnamed protein product [Mus musculus]
Length = 181
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 LAKSDKARYDREMKNYV 79
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSENRPKIKIEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|145480005|ref|XP_001426025.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393097|emb|CAK58627.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK--------SMRAIGKACGEKWKTMTYEEK 114
D PK+P TAFF F + +R+ E+NP I + I + G+KW++M+ +EK
Sbjct: 29 DPNAPKRPLTAFFLFSQKYREKVLERNPGIDLSDYQLEVKLIQISQMAGQKWQSMSEQEK 88
Query: 115 VKYYDIATEKRAEFDRAMADY 135
Y D + +++++ + +Y
Sbjct: 89 QPYVDQYNQAKSKYNDDVKEY 109
>gi|339715208|ref|NP_001092721.2| high-mobility group box 1b [Danio rerio]
Length = 197
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+PP+AFF F D+R + +NP + S+ I K GE W + +
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPPSAFFIFCGDYRPKIKGENPGL-SIGDIAKKLGEMWNSSS 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADY 135
E K Y A + + ++D+ +A Y
Sbjct: 137 AEVKQPYEKKAAKLKEKYDKDIALY 161
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++R M +YI
Sbjct: 64 KQDKVRYEREMKNYI 78
>gi|302851253|ref|XP_002957151.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
gi|300257558|gb|EFJ41805.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
Length = 94
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP A+ +F +D R+ + +NP + S+ IGK GE WK ++ E+K KY A
Sbjct: 20 DPNAPKKPLGAYMWFCKDMRERVKAENPGM-SVTDIGKRLGELWKEVSEEDKKKYLKQAE 78
Query: 123 EKRAEFDRAMADYIK 137
+ + +++ A Y K
Sbjct: 79 DDKERYNKEAAAYNK 93
>gi|410932269|ref|XP_003979516.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
gi|410933007|ref|XP_003979884.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
Length = 209
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ +F++ R+ ++++PD + + C E+WKTM+ +EK K+ D+A + +
Sbjct: 12 PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSRKCSERWKTMSVKEKGKFEDLAKQDK 71
Query: 126 AEFDRAMADYI 136
+DR M DY+
Sbjct: 72 VRYDREMMDYV 82
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F +FR + ++P + ++ + K GE W E+K Y A+
Sbjct: 95 DPNAPKRPPSAFFIFCSEFRPKVKGEHPGL-TIGEVAKKLGELWNNTNSEDKQPYEKKAS 153
Query: 123 EKRAEFDRAMADYIKRKENG 142
+ + ++++ +A Y ++ + G
Sbjct: 154 KLKEKYEKDVAAYRQKTKGG 173
>gi|346324407|gb|EGX94004.1| nucleosome binding protein [Cordyceps militaris CM01]
Length = 96
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
K+ +A + +++KK K D PK+ +A+ +F + R +E+NP + S +GK G
Sbjct: 3 KAAAAPKRGARVEKKRAKKDPNAPKRGLSAYMFFANEQRDNVREENPGV-SFGQVGKILG 61
Query: 104 EKWKTMTYEEKVKY 117
E+WK ++ +++V Y
Sbjct: 62 ERWKALSEKQRVPY 75
>gi|302847869|ref|XP_002955468.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
gi|300259310|gb|EFJ43539.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
Length = 645
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 53 TKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYE 112
K KK+ + D PKK T F YF R+ + +NP I + IGK GE+WK M +
Sbjct: 541 AKPKKERKPKDPNAPKKNLTGFMYFSNANREKVKAENPGI-AFGEIGKMLGERWKGMGAD 599
Query: 113 EKVKYYDIATEKRAEFDRAMADYIKR 138
EK Y +A + + + AM Y +R
Sbjct: 600 EKAPYEQMAAKDKVRYAEAMKAYKER 625
>gi|412992276|emb|CCO19989.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 94
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+F+F+ D R + NPD+K + +GK GE W+ M+ EKV Y A
Sbjct: 20 DPNAPKRNLSAYFFFMNDQRAKVVKANPDMK-VTEVGKKLGELWRAMSDSEKVPYNKKAD 78
Query: 123 EKRAEFDRAMADY 135
+ +++A A Y
Sbjct: 79 ADKVRYEKAKAAY 91
>gi|354543436|emb|CCE40155.1| hypothetical protein CPAR2_101930 [Candida parapsilosis]
Length = 315
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGF---QEQNPDIKSMRAIGKACGEKWK 107
V L K + D +PK+P A+ F E ++ Q+++P+ + R + KA E WK
Sbjct: 150 VNPALAKSAKHRDPDLPKRPTNAYLLFCEQEKERLRQQQQEDPE-NNTRDLSKAMTEAWK 208
Query: 108 TMTYEEKVKYYDIATEKRAEFDRAMADYIKRKE 140
++ E+K +Y + E R + + M +Y K+K+
Sbjct: 209 KLSEEDKQPFYKLYEEDRIRYQKEMVEYTKKKD 241
>gi|148277100|ref|NP_081312.2| high mobility group protein B4 [Mus musculus]
gi|81892334|sp|Q6P8W9.1|HMGB4_MOUSE RecName: Full=High mobility group protein B4
gi|38174595|gb|AAH61030.1| High-mobility group box 4 [Mus musculus]
gi|148698295|gb|EDL30242.1| high-mobility group box 4 [Mus musculus]
Length = 181
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D PK +++ +F+ +FR F+EQ P+ + + C EKW++++ EK KY +A
Sbjct: 5 DQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALA 64
Query: 122 TEKRAEFDRAMADYI 136
+A + + M +YI
Sbjct: 65 ELDKARYQQEMMNYI 79
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K P+KPP++F F D +++NPD ++ + KA G+ W T EK Y A
Sbjct: 89 DPKAPRKPPSSFLLFSRDHYAMLKQENPDWTVVQ-VAKAAGKMWSTTDEAEKKPYEQKAA 147
Query: 123 EKRAEF 128
RA++
Sbjct: 148 LMRAKY 153
>gi|358255365|dbj|GAA57072.1| high mobility group protein B1, partial [Clonorchis sinensis]
Length = 778
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 46 ISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGE 104
IS +R+ + K D PK T + FL+ ++++P + + K C E
Sbjct: 532 ISVRRLLHTMAK-----DKSKPKGALTPYALFLQSMHADQKKKHPSVTLDFKTFSKECSE 586
Query: 105 KWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEED 150
+WK +T +EK K+ D+A + + + + M Y + GK ++D
Sbjct: 587 QWKNLTAKEKKKFEDLAAKDKERYRKEMQSYEPPADEGKSRKRKKD 632
Score = 42.0 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K + K D PKK +AFF F D R + +PD K + I K G++W+T + K
Sbjct: 625 KSRKRKKDPNAPKKALSAFFLFCNDERPKVKADHPDWK-VSEIAKELGKRWETC--KNKS 681
Query: 116 KYYDIATEKRAEFDRAM 132
KY A ++ +++A+
Sbjct: 682 KYESQAQVEKQRYEKAL 698
>gi|313217945|emb|CBY41316.1| unnamed protein product [Oikopleura dioica]
gi|313245828|emb|CBY34818.1| unnamed protein product [Oikopleura dioica]
Length = 200
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P TAFF F R+ + Q + + + K GE WK ++ EEK + IA
Sbjct: 92 DPNAPKRPATAFFLFSTANREKAKAQLEEGAKVGDVAKKLGEMWKLVSAEEKENFAKIAK 151
Query: 123 EKRAEFDRAMADY 135
E +A++D+AM +Y
Sbjct: 152 ESKAKYDKAMEEY 164
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D P+ TA+ YF+ D ++ + NP +K + K CG+KW+T + E+++++ A
Sbjct: 4 DRNKPRGRTTAYGYFVVDEKEKHAKANPGVKINFGEFSKLCGQKWQTKSEEDRIEFEKKA 63
Query: 122 TEKRAEFDRAMADY 135
+E + ++ MA Y
Sbjct: 64 SEDKIRYEEEMASY 77
>gi|449685055|ref|XP_002156373.2| PREDICTED: high mobility group protein homolog TDP-1-like, partial
[Hydra magnipapillata]
Length = 218
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 57 KKHEKLDSKM------PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
K+ E LD KM PK+ TA+F+FL DFR+ Q + + I GEKW++MT
Sbjct: 90 KEKEALDKKMGKDPNKPKRCQTAYFFFLHDFRE--QMKGKALLEGEKIPALAGEKWRSMT 147
Query: 111 YEEKVKYYDIATEKRAEFDRAMADY 135
+EK Y D+ + + +++AM ++
Sbjct: 148 DDEKKVYNDMVQKDKQRYEKAMEEW 172
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
KKP +A+ YF+ D+R +++ + + K CG W M EK YY+ +
Sbjct: 28 KKPTSAYIYFVSDYRLVLKKKGKATNKVNEVAKMCGTAWNAMKENEKAPYYE-------K 80
Query: 128 FDRAMADYIKRKE 140
++ A Y+K KE
Sbjct: 81 YNIDKARYLKEKE 93
>gi|118343938|ref|NP_001071793.1| transcription factor protein [Ciona intestinalis]
gi|70570759|dbj|BAE06616.1| transcription factor protein [Ciona intestinalis]
Length = 164
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP TA+F F+ D R+ ++NP + S+ I K G+KW+ + ++K + A
Sbjct: 17 DKNAPKKPLTAYFIFMNDCRQKVIKENPSL-SITEISKLVGKKWRETSTKDKEPFNKKAA 75
Query: 123 EKRAEFDRAMADY 135
+ R E+++ + Y
Sbjct: 76 KLREEYNKKLEKY 88
>gi|348566777|ref|XP_003469178.1| PREDICTED: high mobility group protein B2-like [Cavia porcellus]
Length = 211
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 96 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 154
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 155 KYEKDIAAY 163
>gi|47522942|ref|NP_999228.1| high mobility group protein B2 [Sus scrofa]
gi|123375|sp|P17741.2|HMGB2_PIG RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|164492|gb|AAA31051.1| non-histone protein HMG2 precursor [Sus scrofa]
Length = 210
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|327268628|ref|XP_003219098.1| PREDICTED: high mobility group protein B2-like [Anolis
carolinensis]
Length = 209
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ YF++ R+ ++++PD + K C E+W+TM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWRTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +YI
Sbjct: 63 MAKGDKARYDREMKNYI 79
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + R + +P + S+ K GE W T ++K+ + A
Sbjct: 89 DPNAPKRPPSAFFLFCSEHRPKIKSDHPGL-SIGDTAKKLGEMWSLQTAKDKLPFEQKAL 147
Query: 123 EKRAEFDRAMADY 135
+ + ++D+ +A Y
Sbjct: 148 KLKEKYDKDIAAY 160
>gi|89475586|gb|ABD73318.1| high-mobility group box 1 [Oncorhynchus mykiss]
Length = 154
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+P +AFF F DFR + + P + S+ + K GEKW +T
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLT 136
Query: 111 YEEKVKY 117
E+KV Y
Sbjct: 137 AEDKVPY 143
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R+ ++++P+ + K C E+W+TM+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDLA 63
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M YI
Sbjct: 64 KLDKVRYEREMRSYI 78
>gi|297813579|ref|XP_002874673.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
gi|297320510|gb|EFH50932.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
EK I + TK KKK+EK+D PKKP +++F F ++ RK E++P I + +
Sbjct: 347 EKTDNIIKKTKEMTKNKKKNEKVDPNKPKKPASSYFLFCKEARKSVLEEHPGINN-STVT 405
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRK 139
KWK + EEK Y A E + + + +Y K K
Sbjct: 406 AHISLKWKELGEEEKQVYNGKAAELMEAYKKEVEEYNKTK 445
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK P +A+ + + R + +N KS+ + K GE+WK ++ E+K Y +A +K+
Sbjct: 248 PKHPISAYLIYANERRAALKGEN---KSVIEVAKMTGEEWKNLSEEQKAPYDQMAKKKKE 304
Query: 127 EFDRAMADYIKRKENGKVENSEEDSEF 153
+ + M Y KE + +E+ E
Sbjct: 305 IYLQEMEGYKITKEEETMSQKKEEEEL 331
>gi|145540136|ref|XP_001455758.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423566|emb|CAK88361.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKS--------MRAIGKACGEKWKTMTYEEK 114
D PK+P T FF F + +R E+NP I + I + G+KW +M+ EEK
Sbjct: 29 DPNAPKRPLTPFFLFSQKYRDKVLERNPGIDQRDYSLEVKLTQISQMAGQKWNSMSEEEK 88
Query: 115 VKYYDIATEKRAEFDRAMADY 135
Y D E + ++D + Y
Sbjct: 89 QPYVDQYNEAKNKYDGDLKVY 109
>gi|444323521|ref|XP_004182401.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
gi|387515448|emb|CCH62882.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
Length = 94
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 53 TKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYE 112
TK + K D PK+ +A+ +F + R + +NPD+ + +GK GE+WK ++ E
Sbjct: 7 TKKRSTRRKKDPNAPKRALSAYMFFANETRDIVRSENPDV-TFGQVGKILGERWKALSAE 65
Query: 113 EKVKYYDIATEKRAEFDR 130
EKV Y E +AE D+
Sbjct: 66 EKVPY-----ETKAEADK 78
>gi|62660600|ref|XP_573625.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|392333089|ref|XP_003752789.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ + + +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSLYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 LAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|395847762|ref|XP_003796535.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 255
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 55 LKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEK 114
L K +K D P +PP+ F F +F + NP I S+ + K E W ++ EK
Sbjct: 104 LAKGGKKKDPNAPTRPPSGFCLFCSEFHPKIKSTNPGI-SIGDVAKKLSEMWSNLSGSEK 162
Query: 115 VKYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSE 152
Y A + R ++++ +ADY K GK + ++ +E
Sbjct: 163 QPYITKAAQLREKYEKDVADY---KSKGKFDGAKGPTE 197
>gi|410057418|ref|XP_003954213.1| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 210
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYIKRKENGK 143
+A +A ++R M YI KE K
Sbjct: 63 MAKADKARYEREMKTYIPPKEETK 86
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SVGDVAKKLGEMWNNAAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|384490121|gb|EIE81343.1| hypothetical protein RO3G_06048 [Rhizopus delemar RA 99-880]
Length = 286
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
+KK + D+ +PK P +A+ +F + R ++ +P+ K + I + G KW++MT E
Sbjct: 183 RKKKKSTDTSLPKHPMSAYLHFAKTMRPIIKKNSPNSK-LVEISQQIGLKWRSMTENEMR 241
Query: 116 KYYDIATEKRAEFDRAMADYI 136
+ ++A E +A + R M D +
Sbjct: 242 PWIEMANEDKARYAREMKDRV 262
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 39 IEKEGKSISAKRV--TTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMR 96
+EKE +I K + T LK+K++ K K+PP A+ F D R+ Q +
Sbjct: 29 VEKEKSNIEYKVIPNLTCLKQKYDNHQPKKVKRPPNAYLLFNRDMRRQMNNQG---MTSG 85
Query: 97 AIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKR 138
I K + WK ++ EE+ KY+ +E + +++ + Y +R
Sbjct: 86 EISKNISQIWKQLSNEERNKYFKEESELKQQYNSSNFVYFRR 127
>gi|225708606|gb|ACO10149.1| High mobility group protein B2 [Osmerus mordax]
Length = 216
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 53 TKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYE 112
TK+ K+ K D PK+PP+AFF F D R + ++P I S+ I K GE W T +
Sbjct: 84 TKVGKR--KKDPNAPKRPPSAFFVFCSDHRARIKGEHPGI-SIGDIAKKLGELWSKQTPK 140
Query: 113 EKVKYYDIATEKRAEFDRAMADY 135
+KV Y A + + ++++ +A Y
Sbjct: 141 DKVPYEAKAGKLKEKYEKDVAAY 163
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D P+ +++ +F++ R+ ++++P + K C E+WKTM+ +EKVK+ D+A
Sbjct: 5 DPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDLA 64
Query: 122 TEKRAEFDRAMADYI 136
+ FDR M Y+
Sbjct: 65 KGDKVRFDREMKGYV 79
>gi|82658290|ref|NP_001032501.1| high mobility group protein B2 [Danio rerio]
gi|81294190|gb|AAI07992.1| Zgc:123215 [Danio rerio]
Length = 213
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F D R + NP I S+ I K GE W ++ +EK Y A
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKVKGDNPGI-SIGDIAKKLGEMWSKLSPKEKSPYEQKAM 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDVAAY 162
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D P+ +++ +F++ R+ +++NP + K C E+W+TM+ +EK K+ ++A
Sbjct: 4 DPNKPRGKTSSYAFFVQTCREEHKKKNPGTSVNFSEFSKKCSERWRTMSSKEKGKFEEMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ +DR M +Y+
Sbjct: 64 KTDKVRYDREMKNYV 78
>gi|221220618|gb|ACM08970.1| High mobility group protein B3 [Salmo salar]
gi|223646914|gb|ACN10215.1| High mobility group protein B3 [Salmo salar]
gi|223672777|gb|ACN12570.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D++ PK +A+ YF++ R+ + +NP+I + K C +WKTM+ +EK K+ D
Sbjct: 3 KGDARKPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYIKRKENGK 143
A + +A +D M Y + GK
Sbjct: 63 QAKQDKARYDSEMTSYGPPGKRGK 86
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F + R + Q+P+ + + K GE W +T K Y A
Sbjct: 91 DPNAPKRPPSGFFVFCAEQRPKIKAQHPNF-GIGDVAKKLGEMWNNLTDSNKQPYLAKAN 149
Query: 123 EKRAEFDRAMADY 135
+ + ++ + +ADY
Sbjct: 150 KLKEKYQKDVADY 162
>gi|221219912|gb|ACM08617.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D++ PK +A+ YF++ R+ + +NP+I + K C +WKTM+ +EK K+ D
Sbjct: 3 KGDARKPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYIKRKENGK 143
A + +A +D M Y + GK
Sbjct: 63 QAKQDKARYDSEMTSYGPPGKRGK 86
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F + R + Q+P+ + + K GE W +T K Y A
Sbjct: 91 DPNAPKRPPSGFFVFCAEQRPKIKAQHPNF-GIGDVAKKLGEMWNNLTDSNKQPYLAKAN 149
Query: 123 EKRAEFDRAMADY 135
+ + ++ + +ADY
Sbjct: 150 KLKEKYQKDVADY 162
>gi|74628491|sp|Q7S045.1|NHP6_NEUCR RecName: Full=Non-histone chromosomal protein 6
gi|336464617|gb|EGO52857.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2508]
gi|350296712|gb|EGZ77689.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2509]
Length = 103
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
K+ + + T K++K+ K D PK+ +A+ +F + R+ +E+NP + S +GK G
Sbjct: 3 KAAAKSKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILG 61
Query: 104 EKWKTMTYEEKVKY 117
E+WK ++ +++ Y
Sbjct: 62 ERWKALSDKQRAPY 75
>gi|390363101|ref|XP_781828.3| PREDICTED: FACT complex subunit SSRP1-like [Strongylocentrotus
purpuratus]
Length = 703
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K K EK D+ PK+P T + +L D R+ +EQ P I S+ + K GE W+ + K
Sbjct: 558 KVKQEK-DANRPKRPTTGYMLWLNDQREDIKEQFPGI-SVTDLTKKAGEMWQKLGDTGKA 615
Query: 116 KYYDIATEKRAEFDRAM 132
K+ +IA EK+ E++ AM
Sbjct: 616 KWNEIAGEKKKEYEIAM 632
>gi|123444818|ref|XP_001311176.1| HMG box family protein [Trichomonas vaginalis G3]
gi|121892975|gb|EAX98246.1| HMG box family protein [Trichomonas vaginalis G3]
Length = 184
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
K+PP AF F D R+ + +NPD+K++ + + E+WK + EK+ Y +A E++
Sbjct: 37 KRPPNAFLLFCRDKRQAARGENPDLKNVD-VSQVLAEQWKNLADTEKLYYKALAAEQQKL 95
Query: 128 FDRAMADY 135
F DY
Sbjct: 96 FKEENPDY 103
>gi|67524855|ref|XP_660489.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|74597086|sp|Q5B995.1|NHP6_EMENI RecName: Full=Non-histone chromosomal protein 6
gi|40744280|gb|EAA63456.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|259486178|tpe|CBF83812.1| TPA: Non-histone chromosomal protein 6
[Source:UniProtKB/Swiss-Prot;Acc:Q5B995] [Aspergillus
nidulans FGSC A4]
Length = 106
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 48 AKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWK 107
A R T KKK D PK+ +A+ +F D R +E+NP I S +GK GEKWK
Sbjct: 12 ATRETGGRKKK----DPNAPKRGLSAYMFFANDNRDKVREENPGI-SFGQVGKMLGEKWK 66
Query: 108 TMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDS 151
+++ +E+ Y D A + ++ A Y + G+ E EE S
Sbjct: 67 SLSDKERKPYEDKAAADKKRYEDEKAAY----KAGEAEEDEESS 106
>gi|303289076|ref|XP_003063826.1| histone chaperone [Micromonas pusilla CCMP1545]
gi|226454894|gb|EEH52199.1| histone chaperone [Micromonas pusilla CCMP1545]
Length = 657
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYD 119
D PK+P +++ F + R E+ P + S+ IGKA G KWK MT EEKV Y D
Sbjct: 553 DPNAPKRPLSSYMIFAGENRGKLVEETPGM-SIGEIGKALGAKWKEMTAEEKVPYED 608
>gi|5764680|gb|AAC27653.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ EEK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAEEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|409043132|gb|EKM52615.1| hypothetical protein PHACADRAFT_164552 [Phanerochaete carnosa
HHB-10118-sp]
Length = 115
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+ +A+ +F +D+R+ + +NPD S +GK G KWK + EEK Y +
Sbjct: 24 KKDKNAPKRALSAYMFFSQDWRERVKAENPDA-SFGELGKLLGTKWKELDEEEKKPYIEQ 82
Query: 121 ATEKRAEFDRAMADYIKRK 139
A +A +R DY +K
Sbjct: 83 AERDKARAEREKKDYDNKK 101
>gi|321259756|ref|XP_003194598.1| nonhistone protein 6 [Cryptococcus gattii WM276]
gi|317461070|gb|ADV22811.1| Nonhistone protein 6, putative [Cryptococcus gattii WM276]
Length = 110
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 48 AKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWK 107
+K+ T K+ K D PK+ +A+ +F++D+R+ + +NP+ + +GK G KW+
Sbjct: 9 SKKSTASDAKRRSKKDPNKPKRALSAYMFFVQDYRERIKAENPEA-TFGDVGKLLGIKWR 67
Query: 108 TMTYEEKVKYYDIATEKRAEFDRAMADY 135
M EK Y A + DR ADY
Sbjct: 68 EMNENEKKPYEAKAKADKERADRENADY 95
>gi|149060359|gb|EDM11073.1| rCG63620 [Rattus norvegicus]
Length = 198
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +A +DR
Sbjct: 2 SSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDKARYDR 61
Query: 131 AMADYI 136
M +Y+
Sbjct: 62 EMKNYV 67
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 83 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 141
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 142 KYEKDIAAY 150
>gi|56758270|gb|AAW27275.1| SJCHGC02538 protein [Schistosoma japonicum]
gi|226486700|emb|CAX74427.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226486702|emb|CAX74428.1| High mobility group protein DSP1 [Schistosoma japonicum]
Length = 226
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D PK P +A+ F++ R+ ++++P + + + K C E+WK MT +EK ++ D+A
Sbjct: 6 DKNKPKGPMSAYSCFVQVIREEHKKKHPGEQIVFSDFSKKCAERWKLMTPKEKKRFEDLA 65
Query: 122 TEKRAEFDRAMADYI 136
R F+R M DY+
Sbjct: 66 VLDRERFNREMCDYV 80
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D +P + +AFF+F ++FR +E NPD K + I K G +W++ ++K KY +A
Sbjct: 96 DPSVPARAWSAFFFFCDEFRAKVRESNPDWK-VADIAKELGRQWESC--QDKAKYELLAQ 152
Query: 123 EKRAEFDRAMADY 135
+ + ++ M Y
Sbjct: 153 KDKQRYEEDMIKY 165
>gi|291415825|ref|XP_002724150.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +A +DR
Sbjct: 14 SSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDR 73
Query: 131 AMADYI 136
M +Y+
Sbjct: 74 EMKNYV 79
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEHSVKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|226486704|emb|CAX74429.1| High mobility group protein DSP1 [Schistosoma japonicum]
Length = 226
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D PK P +A+ F++ R+ ++++P + + + K C E+WK MT +EK ++ D+A
Sbjct: 6 DKNKPKGPMSAYSCFVQVIREEHKKKHPGEQIVFSDFSKKCAERWKLMTPKEKKRFEDLA 65
Query: 122 TEKRAEFDRAMADYI 136
R F+R M DY+
Sbjct: 66 VLDRERFNREMCDYV 80
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D +P + +AFF+F ++FR +E NPD K + I K G +W++ ++K KY +A
Sbjct: 96 DPSVPARAWSAFFFFCDEFRAKVRESNPDWK-VADIAKELGRQWESC--QDKAKYELLAQ 152
Query: 123 EKRAEFDRAMADY 135
+ + ++ M Y
Sbjct: 153 KDKQRYEEDMIKY 165
>gi|156083745|ref|XP_001609356.1| high mobility group protein-like protein NHP1 [Babesia bovis T2Bo]
gi|730136|sp|P40632.1|NHP1_BABBO RecName: Full=High mobility group protein homolog NHP1
gi|344189439|pdb|2LHJ|A Chain A, Nmr Structure Of The High Mobility Group Protein-Like
Protein Nhp1 From Babesia Bovis T2bo (Baboa.00841.A)
gi|155890|gb|AAA27799.1| non-histone protein [Babesia bovis]
gi|154796607|gb|EDO05788.1| high mobility group protein-like protein NHP1 [Babesia bovis]
Length = 97
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDI-KSMRAIGKACGEKWKTMTYEEKVKYYD 119
K D PK+ +++ +F ++ R +NP+I K + AIGK G W ++ EEK Y
Sbjct: 17 KKDPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAIGKMIGAAWNALSDEEKKPYER 76
Query: 120 IATEKRAEFDRAMADYIKRK 139
++ E R ++R A+Y +RK
Sbjct: 77 MSDEDRVRYEREKAEYAQRK 96
>gi|291403518|ref|XP_002718101.1| PREDICTED: high mobility group box 3-like [Oryctolagus cuniculus]
Length = 197
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ +K +Y A
Sbjct: 89 DPNAPKRPPSRFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSDKQQYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ + DY K GK + +
Sbjct: 148 KLKEKYEKDVTDY---KSKGKFDGA 169
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +D
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDW 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|400602743|gb|EJP70345.1| HMG box protein [Beauveria bassiana ARSEF 2860]
Length = 514
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 42 EGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKA 101
E S S VT + ++H K D P++PP+A+ F R+ + N S I K
Sbjct: 94 EAGSESTNGVTKRKYRRHPKPDEHAPERPPSAYVLFSNKMREDLKSHN---LSFTEIAKL 150
Query: 102 CGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKE 140
GE W+ + E+ + + A + ++ R++A+Y K E
Sbjct: 151 VGENWQNLDQAERESFENQANVAKDKYRRSLAEYKKTPE 189
>gi|222087985|gb|ACM41855.1| high mobility group box 2-like protein [Epinephelus coioides]
Length = 212
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + R +E+ P I S+ K GE W T + +EK Y A
Sbjct: 87 DPNAPKRPPSAFFVFCSEHRPRIKEECPGI-SIGDTAKKLGELWSTQSSKEKAPYEAKAA 145
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +A Y + +GK +
Sbjct: 146 KLKEKYEKEVAAYRAKGVSGKSDGG 170
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ +F+ D R+ + ++P A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 8 SSYAFFIADCREEHKRKHPGTSVGFAEFSKKCSERWKTMSAKEKAKFEELAKTDKIRYDR 67
Query: 131 AMADYI 136
M YI
Sbjct: 68 EMKTYI 73
>gi|47227840|emb|CAG09003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 199
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V K KK D PK+PP+AFF F +FR + +NP + ++ K GE W + T
Sbjct: 78 VPPKGHKKKRFKDPNAPKRPPSAFFLFCAEFRPKVKSENPGL-TIGDTAKKLGEMWNSKT 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVEN 146
E+K Y A + + ++D+ D + + GKV++
Sbjct: 137 AEDKQPYEKKAAKLKEKYDK---DIVAYRTKGKVDS 169
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D K P+ +++ YF++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++R M +Y+
Sbjct: 64 KQDKVRYEREMKNYV 78
>gi|405121060|gb|AFR95829.1| nonhistone protein 6 [Cryptococcus neoformans var. grubii H99]
Length = 116
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 48 AKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWK 107
+K+ T KK K D PK+ +A+ +F++D+R+ + +NP+ + +GK G KW+
Sbjct: 9 SKKSTASDAKKRTKKDPNKPKRALSAYMFFVQDYRERIKAENPEA-TFGDVGKLLGIKWR 67
Query: 108 TMTYEEKVKYYDIATEKRAEFDRAMADY 135
M EK Y A + DR ADY
Sbjct: 68 EMNENEKKPYEAKAKADKERADRENADY 95
>gi|395542387|ref|XP_003773114.1| PREDICTED: high mobility group protein B2 isoform 1 [Sarcophilus
harrisii]
gi|395542389|ref|XP_003773115.1| PREDICTED: high mobility group protein B2 isoform 2 [Sarcophilus
harrisii]
Length = 207
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSPVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 LAKGDKARYDREMKNYV 79
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K+ Y + +
Sbjct: 95 PKRPPSAFFLFCAEHRPKIKSEHPGL-SIGDTAKKLGELWSEQSAKDKLPYEQKVAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|344228278|gb|EGV60164.1| hypothetical protein CANTEDRAFT_110112 [Candida tenuis ATCC 10573]
Length = 89
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 59 HEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYY 118
+K D PK+ +A+ +F D R + +NP I + +G+ GE+WK +T +EK+ Y
Sbjct: 9 RKKKDPDAPKRSLSAYMFFANDNRDIVRAENPGI-AFGQVGRLLGERWKALTADEKIPYE 67
Query: 119 DIATEKRAEFDRAMADYIKR 138
A + + +++ A+Y K+
Sbjct: 68 KKANDDKKRYEKQKAEYAKK 87
>gi|126331239|ref|XP_001365344.1| PREDICTED: high mobility group protein B2-like [Monodelphis
domestica]
Length = 207
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSPVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 LAKGDKARYDREMKNYV 79
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K+ Y + +
Sbjct: 95 PKRPPSAFFLFCAEHRPKIKSEHPGL-SIGDTAKKLGELWSEQSAKDKLPYEQKVAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|58268918|ref|XP_571615.1| nonhistone protein 6 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112618|ref|XP_774852.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818300|sp|P0CO25.1|NHP6_CRYNB RecName: Full=Non-histone chromosomal protein 6
gi|338818301|sp|P0CO24.1|NHP6_CRYNJ RecName: Full=Non-histone chromosomal protein 6
gi|50257500|gb|EAL20205.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227850|gb|AAW44308.1| nonhistone protein 6, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 116
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 48 AKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWK 107
+K+ T KK K D PK+ +A+ +F++D+R+ + +NP+ + +GK G KW+
Sbjct: 9 SKKSTASDAKKRTKKDPNKPKRALSAYMFFVQDYRERIKTENPEA-TFGDVGKLLGIKWR 67
Query: 108 TMTYEEKVKYYDIATEKRAEFDRAMADY 135
M EK Y A + DR ADY
Sbjct: 68 EMNENEKKPYEAKAKADKERADRENADY 95
>gi|291413997|ref|XP_002723251.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|255537735|ref|XP_002509934.1| transcription factor, putative [Ricinus communis]
gi|223549833|gb|EEF51321.1| transcription factor, putative [Ricinus communis]
Length = 514
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F + R +N K++R + K GE+WK MT E+K Y ++A
Sbjct: 307 DPLKPKQPMSAFFLFSNERRASLLAEN---KNVREVAKIAGEQWKNMTEEQKGPYEEMAK 363
Query: 123 EKRAEFDRAMADYIKRKE 140
+ + + M Y ++K+
Sbjct: 364 RNKLRYMQEMEAYKQKKD 381
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
KKK + +D PKKP ++F F ++ RK ++ P I + + KWK ++ EE+
Sbjct: 425 KKKQQNVDPNKPKKPASSFLIFSKEARKNLAQERPVINN-STLNALISVKWKELSEEERQ 483
Query: 116 KYYDIATEKRAEFDRAMADYIK 137
+ A E + + M +Y K
Sbjct: 484 IWNAKAAEAMEIYKKEMEEYNK 505
>gi|367043490|ref|XP_003652125.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
gi|346999387|gb|AEO65789.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
Length = 103
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 47 SAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
+AK + K++K+ K D PK+ +A+ +F + R+ +E+NP + S +GK GE+W
Sbjct: 4 AAKGKSGKVEKRRGKKDPNAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILGERW 62
Query: 107 KTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDS 151
K ++ +++ Y E +A D+ + K+ N + + EE+S
Sbjct: 63 KALSDKQRAPY-----EAKAAADKKRYEDEKQAYNAQADGDEEES 102
>gi|159478607|ref|XP_001697394.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158274552|gb|EDP00334.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 255
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 59 HEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYY 118
+E+ S PKKP T F +F R+ + +NP I + + K GEKW ++ +EK +Y
Sbjct: 114 NERKASGAPKKPMTPFLHFSNAVRESVKAENPGI-AFGELAKVIGEKWAKLSAQEKAEYV 172
Query: 119 DIATEKRAEFDRAMADYIKRKE 140
E + + R M DY +E
Sbjct: 173 KRFDEDKQRYAREMQDYALARE 194
>gi|587104|emb|CAA57212.1| unnamed protein product [Drosophila melanogaster]
Length = 328
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 190 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVD 248
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 249 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 282
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 109 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 167
Query: 120 IATEKRAEFDRAMADYI 136
+A + + ++ M +Y+
Sbjct: 168 MAEKDKQRYEAEMQNYV 184
>gi|410910284|ref|XP_003968620.1| PREDICTED: high mobility group-T protein-like isoform 2 [Takifugu
rubripes]
Length = 184
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D K P+ +++ YF++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++R M +Y+
Sbjct: 64 KQDKVRYEREMKNYV 78
>gi|47208870|emb|CAF95025.1| unnamed protein product [Tetraodon nigroviridis]
Length = 550
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 33 VVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMP--KKPPTAFFYFLEDFRKGFQEQNP 90
V A+ E G +IS K H+K + K P KKP AF ++++ R +
Sbjct: 266 VSPAIKQEPSGDNISPTMQARKSPAPHKKEEDKKPHIKKPLNAFMLYMKEMRAKVVAECT 325
Query: 91 DIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
+K AI + G +W +++ EE+ KYY++A ++R
Sbjct: 326 -LKESAAINQILGRRWHSLSREEQAKYYELARKER 359
>gi|355694838|gb|AER99802.1| high-mobility group box 2 [Mustela putorius furo]
Length = 100
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R ++++PD A K C E+WKTM+ +EK K+ D
Sbjct: 4 KGDPNKPRGKMSSYAFFVQTCRGEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 63
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 64 MAKSDKARYDREMKNYV 80
>gi|219119941|ref|XP_002180721.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408194|gb|EEC48129.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 90
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ A+ +F + R ++ P IK + +GK GE+W+ +T EEK ++ ++AT
Sbjct: 17 DPAAPKRASGAYVFFTNEMRPKVLQEFPGIKFV-DLGKVLGERWRALTPEEKKRFEEVAT 75
Query: 123 EKRAEFDRAMADY 135
E + F M Y
Sbjct: 76 EDKIRFQMEMQQY 88
>gi|194208319|ref|XP_001498869.2| PREDICTED: high mobility group protein B2-like [Equus caballus]
Length = 210
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +A +DR
Sbjct: 14 SSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDR 73
Query: 131 AMADYI 136
M +Y+
Sbjct: 74 EMKNYV 79
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|156552179|ref|XP_001605958.1| PREDICTED: high mobility group protein DSP1 [Nasonia vitripennis]
Length = 433
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 48 AKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWK 107
++VT + KK+ D PK+ +AFF+F D R + NP+ + I K G+KW
Sbjct: 314 GEKVTGRGKKRKHIKDPNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWS 372
Query: 108 TMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENG 142
E K KY +A + +A ++R M Y K++++G
Sbjct: 373 DAGPELKGKYEAMAEKDKARYEREMTAYKKKQKDG 407
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSM-RAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
TA+ +F++ R+ ++++PD + + K C +WKTM+ +EK +++++A + + +D
Sbjct: 245 TAYAFFVQTCRQEHKKKHPDENIVFQEFSKKCALRWKTMSDKEKKRFHEMAEKDKKRYDT 304
Query: 131 AMADYIKRK 139
M YI K
Sbjct: 305 EMQSYIPPK 313
>gi|109469394|ref|XP_001076232.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392338825|ref|XP_003753645.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 214
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEVSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTASDDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ A Y
Sbjct: 150 KLKEKYEKDTAAY 162
>gi|255073265|ref|XP_002500307.1| set domain protein [Micromonas sp. RCC299]
gi|226515569|gb|ACO61565.1| set domain protein [Micromonas sp. RCC299]
Length = 1496
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKS-MRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
K+P TAFF F ++ R EQ P++++ + A+GK GE+W+ ++ EEK Y A E R
Sbjct: 674 KRPMTAFFIFSQEQRALLIEQRPELRTNISAVGKLMGERWRKLSDEEKFPYAIKAEEARH 733
Query: 127 EF 128
E+
Sbjct: 734 EY 735
>gi|256070479|ref|XP_002571570.1| high mobility group protein [Schistosoma mansoni]
gi|97976778|tpe|CAJ29301.1| TPA: putative high mobility group B2 protein [Schistosoma mansoni]
gi|353230496|emb|CCD76667.1| high mobility group protein [Schistosoma mansoni]
Length = 226
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D PK P +A+ F++ R+ ++++P + + + K C E+WK MT +EK ++ D+A
Sbjct: 6 DKNKPKGPMSAYACFVQVIREEHKKKHPGEQIVFSDFSKKCAERWKLMTPKEKKRFEDLA 65
Query: 122 TEKRAEFDRAMADYI 136
R F+R M DY+
Sbjct: 66 VLDRERFNREMCDYV 80
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D +P + +AFF+F ++FR +E NPD K + I K G +W+T ++K KY +A
Sbjct: 96 DPTVPARAWSAFFFFCDEFRSKVRESNPDWK-VADIAKELGRQWETC--QDKAKYELLAQ 152
Query: 123 EKRAEFDRAM-----ADYIKR--KENGKVENS 147
+ + ++ M Y+ R K G V NS
Sbjct: 153 KDKQRYEEDMIKYRAGTYVPREKKLAGAVSNS 184
>gi|401624308|gb|EJS42370.1| abf2p [Saccharomyces arboricola H-6]
Length = 183
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+F FL+D R F ++NP ++ I K GEKW+T+ K KY + +
Sbjct: 43 PKRPTSAYFLFLQDHRSQFVKENPTLRPAE-ISKVAGEKWQTLDAGIKDKYLSQRKKLFS 101
Query: 127 EFDRAMADY 135
E+ +A +Y
Sbjct: 102 EYQKAKKEY 110
>gi|326664195|ref|XP_001923156.2| PREDICTED: FACT complex subunit SSRP1 [Danio rerio]
Length = 713
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
DS PK+P +A+ +L R + +NP I S+ I K GE WK + ++K ++ A
Sbjct: 539 DSGAPKRPMSAYMLWLNSSRDRIKSENPGI-SITEISKKAGEMWKQLGKDKKEEWDGKAE 597
Query: 123 EKRAEFDRAMADY 135
E + E+DRAM +Y
Sbjct: 598 EAKKEYDRAMREY 610
>gi|221220328|gb|ACM08825.1| High mobility group protein B3 [Salmo salar]
Length = 203
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D++ PK +A+ YF++ R+ + +NP+I + K C +WKTM+ +EK K+ D
Sbjct: 3 KGDARKPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYIKRKENGK 143
A + +A +D M Y + GK
Sbjct: 63 QAKQDKARYDLEMTSYGPPGKRGK 86
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F + R + Q+P+ + + K GE W +T K Y A
Sbjct: 91 DPNAPKRPPSGFFVFCAEQRPKIKAQHPNF-GIGDVAKKLGEMWNNLTDSNKQPYLAKAN 149
Query: 123 EKRAEFDRAMADY 135
+ + ++ + +ADY
Sbjct: 150 KLKEKYQKDVADY 162
>gi|432117313|gb|ELK37700.1| Putative high mobility group protein B3-like protein [Myotis
davidii]
Length = 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +A+ +F++ R+ +++NP++ S K C E+WKTM+ ++K K+ +
Sbjct: 3 KSDPKKPQGKMSAYAFFVQTCREEHKKKNPEVPVSFAEFSKKCSERWKTMSAKKKSKFDE 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +D+ M DY
Sbjct: 63 MAKADKVHYDQEMTDY 78
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 66 MPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEE 113
+PK+P + FF F +FR + NP S+ + K GE W ++ E
Sbjct: 91 VPKRPTSGFFLFCSEFRPKIKSTNPG-SSIGDVAKKLGEMWNNLSDSE 137
>gi|379698916|ref|NP_001243929.1| HMGB protein [Bombyx mori]
gi|337729569|gb|AEI70325.1| HMGB protein [Bombyx mori]
Length = 195
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Query: 64 SKMPKKPP--------TAFFYFLEDFRKGFQEQNPDIKSM-RAIGKACGEKWKTMTYEEK 114
++MP+ P TA+ +F++ R+ +++ PD+ + A K C E+W TM+ +EK
Sbjct: 96 ARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEK 155
Query: 115 VKYYDIATEKRAEFDRAMADYIKRKE 140
+++++A + + FD M +Y+ K+
Sbjct: 156 QRFHEMAEQDKHRFDLEMQNYVPPKD 181
>gi|159462694|ref|XP_001689577.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158283565|gb|EDP09315.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 552
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKK +AF YF R + +NP I + +GK GE+WK M+ EEK Y ++A
Sbjct: 480 DPNAPKKNLSAFMYFSNSNRDKVKAENPGI-AFGEVGKLLGERWKAMSAEEKAPYDEMAA 538
Query: 123 EKRAEFDRAMA 133
+ +A D A
Sbjct: 539 KDKAGADSTTA 549
>gi|426215132|ref|XP_004001831.1| PREDICTED: high mobility group protein B4 [Ovis aries]
Length = 196
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY
Sbjct: 5 KRDHLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 64
Query: 120 IATEKRAEFDRAMADYI 136
+A +A + M +Y+
Sbjct: 65 LAKLDKARYQEEMMNYL 81
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D P++PP++F F +D + +NP S+ + KA G+ W T +K Y A
Sbjct: 91 DPHAPRRPPSSFLLFCQDHYAQLKSENPSW-SVVQVAKASGKMWSAKTDVDKQPYEQRAA 149
Query: 123 EKRAEFDRAMADY 135
RA++ ++ Y
Sbjct: 150 LLRAKYREELSVY 162
>gi|444732719|gb|ELW72994.1| High mobility group protein B1 [Tupaia chinensis]
Length = 289
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ EEK K+ D+A
Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAEEKGKFEDMA 64
Query: 122 TEKRAEFDRAMADYI 136
+A ++R M YI
Sbjct: 65 KADKARYEREMKTYI 79
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+PP+AFF F ++R + ++P + S+ + K GE W +EK Y
Sbjct: 91 DPNSPKRPPSAFFLFCSEYRPKIKGEHPGL-SVGDVTKKLGEMWNNTAADEKQPY 144
>gi|444707322|gb|ELW48604.1| High mobility group protein B4 [Tupaia chinensis]
Length = 189
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKWK+++ EK KY +A +
Sbjct: 11 PKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWKSISKHEKAKYEALAKLDK 70
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 71 ARYQEEMMNYV 81
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP ++ + KA G+ W MT EK Y A
Sbjct: 91 DPQAPRRPPSSFILFCQDHYAQLKRENPSWTVVQ-VAKASGKMWTVMTAVEKQPYEQRAA 149
Query: 123 EKRAEFDRAMADYIKRKENGK 143
RA + + Y K+++ K
Sbjct: 150 LLRARYQEELEVYRKQRQAWK 170
>gi|260166759|gb|ACX32991.1| RE09522p [Drosophila melanogaster]
Length = 411
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 273 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVD 331
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 332 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 365
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 192 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 250
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A + + ++ M +Y+ K
Sbjct: 251 MAEKDKQRYEAEMQNYVPPK 270
>gi|393236124|gb|EJD43675.1| hypothetical protein AURDEDRAFT_114701 [Auricularia delicata
TFB-10046 SS5]
Length = 107
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+ +A+ +F++D+R +E+NPD S +GK G KWK M E+K Y AT+
Sbjct: 28 PKRALSAYMFFVQDWRDRIKEENPDA-SFGEVGKLLGAKWKEMDDEDKEPYNQKATK--- 83
Query: 127 EFDRAMADYIKRKENGKVENSEEDSE 152
D+A A K + GK ++++D E
Sbjct: 84 --DKARAAKEKAGKAGKEASADDDEE 107
>gi|448084218|ref|XP_004195549.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359376971|emb|CCE85354.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
T K + +K D PK+ +A+ +F + R + +NP I S +GK GEKWK MT
Sbjct: 3 TTEKKRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKAMT 61
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKR 138
++K Y A + +++ A+Y K+
Sbjct: 62 SDDKTPYESKAEADKKRYEKEKAEYAKK 89
>gi|221329973|ref|NP_001138203.1| dorsal switch protein 1, isoform F [Drosophila melanogaster]
gi|220901792|gb|ACL82935.1| dorsal switch protein 1, isoform F [Drosophila melanogaster]
Length = 397
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 259 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVD 317
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 318 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 351
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 178 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 236
Query: 120 IATEKRAEFDRAMADYI 136
+A + + ++ M +Y+
Sbjct: 237 MAEKDKQRYEAEMQNYV 253
>gi|164422576|ref|XP_957906.2| hypothetical protein NCU09995 [Neurospora crassa OR74A]
gi|157069727|gb|EAA28670.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 95
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
K+ + + T K++K+ K D PK+ +A+ +F + R+ +E+NP + S +GK G
Sbjct: 3 KAAAKSKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILG 61
Query: 104 EKWKTMTYEEKVKY 117
E+WK ++ +++ Y
Sbjct: 62 ERWKALSDKQRAPY 75
>gi|413938186|gb|AFW72737.1| hypothetical protein ZEAMMB73_544458 [Zea mays]
Length = 96
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 40/61 (65%)
Query: 78 LEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIK 137
+ +FR+ +Q +P KS+ + KA GEKW+ M+ +EK Y D A +K+ ++++ A++ K
Sbjct: 1 MSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKKQDYEKTKANFDK 60
Query: 138 R 138
+
Sbjct: 61 K 61
>gi|45551469|ref|NP_727959.2| dorsal switch protein 1, isoform D [Drosophila melanogaster]
gi|45447020|gb|AAN09394.2| dorsal switch protein 1, isoform D [Drosophila melanogaster]
gi|327180774|gb|AEA30996.1| RE44118p [Drosophila melanogaster]
Length = 386
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 248 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVD 306
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 307 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 340
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 167 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 225
Query: 120 IATEKRAEFDRAMADYI 136
+A + + ++ M +Y+
Sbjct: 226 MAEKDKQRYEAEMQNYV 242
>gi|24642472|ref|NP_727960.1| dorsal switch protein 1, isoform A [Drosophila melanogaster]
gi|24642474|ref|NP_727961.1| dorsal switch protein 1, isoform B [Drosophila melanogaster]
gi|24642476|ref|NP_542446.2| dorsal switch protein 1, isoform C [Drosophila melanogaster]
gi|16768340|gb|AAL28389.1| GM02110p [Drosophila melanogaster]
gi|22832356|gb|AAN09395.1| dorsal switch protein 1, isoform A [Drosophila melanogaster]
gi|22832357|gb|AAN09396.1| dorsal switch protein 1, isoform B [Drosophila melanogaster]
gi|22832358|gb|AAF48594.2| dorsal switch protein 1, isoform C [Drosophila melanogaster]
gi|220943192|gb|ACL84139.1| Dsp1-PA [synthetic construct]
gi|220953466|gb|ACL89276.1| Dsp1-PA [synthetic construct]
Length = 385
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 247 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVD 305
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 306 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 339
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 166 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 224
Query: 120 IATEKRAEFDRAMADYI 136
+A + + ++ M +Y+
Sbjct: 225 MAEKDKQRYEAEMQNYV 241
>gi|410910282|ref|XP_003968619.1| PREDICTED: high mobility group-T protein-like isoform 1 [Takifugu
rubripes]
Length = 196
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D K P+ +++ YF++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++R M +Y+
Sbjct: 64 KQDKVRYEREMKNYV 78
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V K KK D PK+PP+AFF F + R + +NP + ++ K GE W + T
Sbjct: 78 VPPKGHKKKRFKDPNAPKRPPSAFFLFCAELRPKVKSENPGL-TIGDTAKKLGEMWNSKT 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVEN 146
EEK Y A + + ++D+ D + + GKV++
Sbjct: 137 AEEKQPYEKKAAKLKEKYDK---DIVAYRTKGKVDS 169
>gi|388857581|emb|CCF48730.1| related to NHP6B-nonhistone chromosomal protein [Ustilago hordei]
Length = 253
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 53 TKLKKKHEKL--DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+KL+K+ EK D PK+PP+A+ F + R+ ++++P + +GK E WK +T
Sbjct: 158 SKLQKRKEKRLRDPDAPKRPPSAYLLFQNEVRQEIRKKHPGMPYSEVLGK-VSEAWKALT 216
Query: 111 YEEKVKYYDIATEKRAEFDR 130
E++ Y D TE A +++
Sbjct: 217 DEQRRVYQDKTTENMATWNQ 236
>gi|194770156|ref|XP_001967163.1| GF19115 [Drosophila ananassae]
gi|190619283|gb|EDV34807.1| GF19115 [Drosophila ananassae]
Length = 387
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 249 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVD 307
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 308 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 341
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 168 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 226
Query: 120 IATEKRAEFDRAMADYI 136
+A + + ++ M +Y+
Sbjct: 227 MAEKDKQRYEAEMQNYV 243
>gi|45555716|ref|NP_996485.1| dorsal switch protein 1, isoform E [Drosophila melanogaster]
gi|17366497|sp|Q24537.1|HMG2_DROME RecName: Full=High mobility group protein DSP1; AltName:
Full=Protein dorsal switch 1
gi|1150375|emb|CAA61938.1| ssrp2 [Drosophila melanogaster]
gi|45447019|gb|AAS65386.1| dorsal switch protein 1, isoform E [Drosophila melanogaster]
Length = 393
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 255 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVD 313
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 314 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 347
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 174 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 232
Query: 120 IATEKRAEFDRAMADYI 136
+A + + ++ M +Y+
Sbjct: 233 MAEKDKQRYEAEMQNYV 249
>gi|109076196|ref|XP_001085665.1| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 321
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 119 DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMA 178
Query: 122 TEKRAEFDRAMADYI 136
+A +DR M +Y+
Sbjct: 179 KSDKARYDREMKNYV 193
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 209 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 267
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 268 KYEKDIAAY 276
>gi|291413747|ref|XP_002723128.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 27 KGDPNKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKPKFED 86
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 87 MAKSDKARYDREMKNYV 103
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 119 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 177
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 178 KYEKDIAAY 186
>gi|291395415|ref|XP_002714100.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNEPRGKMSSYAFFVQTCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKACYDREMKNYV 79
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + R + ++ + S+ K GE W + +++ Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIRSEHSGL-SIGDTAKKLGEMWSEQSAKDEQPYEQKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|67475910|ref|XP_653586.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56470556|gb|EAL48200.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449703217|gb|EMD43706.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica KU27]
Length = 111
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PPT +F +L + R +E++PD K + I K E+WK + EEK +Y A +
Sbjct: 26 PKRPPTPYFLYLNEHRASIKEEHPDAK-VTEIAKIASEQWKALGEEEKKEYQTKADAAKE 84
Query: 127 EFDRAMADYIKRKE 140
++ + + Y +K+
Sbjct: 85 QYKKDIEKYDGKKQ 98
>gi|410966739|ref|XP_003989887.1| PREDICTED: high mobility group protein B4 [Felis catus]
Length = 193
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ S + + C EKW++++ EK KY +A +
Sbjct: 11 PKANVSSYIHFLLNYRNKFKEQQPNTYLSFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 70
Query: 126 AEFDRAMADY 135
A + M +Y
Sbjct: 71 ARYQEEMMNY 80
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D P++PP++F F +D + +NP+ S+ + KA G+ W T EK Y A
Sbjct: 91 DPYAPRRPPSSFLLFCQDHYAQLKRENPNW-SVVQVAKASGKMWSATTGAEKQPYEQRAA 149
Query: 123 EKRAEFDRAMADYIKRKENGK 143
RA++ + Y K+++ K
Sbjct: 150 LLRAKYQEDLEIYRKQRKANK 170
>gi|110287688|sp|Q4PBZ9.2|NHP6_USTMA RecName: Full=Non-histone chromosomal protein 6
Length = 99
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 45 SISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGE 104
S S ++ TTK KK D PK+P +A+ +F +D R+ + NP+ +G+ G
Sbjct: 11 STSTQKRTTKAKK-----DPDAPKRPLSAYMFFSQDQRERVKNANPEA-GFGEVGRLLGA 64
Query: 105 KWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRK 139
KWK M+ EK Y D+A +A + A Y KR+
Sbjct: 65 KWKEMSEAEKKPYNDMANRDKARAEAEKAAYNKRR 99
>gi|195479189|ref|XP_002100798.1| GE17263 [Drosophila yakuba]
gi|194188322|gb|EDX01906.1| GE17263 [Drosophila yakuba]
Length = 394
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 256 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVD 314
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 315 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 348
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 175 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 233
Query: 120 IATEKRAEFDRAMADYI 136
+A + + ++ M +Y+
Sbjct: 234 MAEKDKQRYEAEMQNYV 250
>gi|225715078|gb|ACO13385.1| High mobility group protein B3 [Esox lucius]
Length = 204
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D++ PK +A+ YF++ R+ +++NP+I + K C +WKTM+ +EK K+ D
Sbjct: 3 KGDARKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFSEFSKKCAGRWKTMSPKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYIKRKENGK 143
A + +A ++ M Y + GK
Sbjct: 63 QANQDKARYESEMTSYGPPGKRGK 86
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 58 KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
K K D PK+PP+ FF F + R + Q+P + + K GE W +T K Y
Sbjct: 86 KKAKKDPNAPKRPPSGFFVFCAEQRPKIKAQHPSF-GIGDVAKKLGEAWNNLTDSSKQPY 144
Query: 118 YDIATEKRAEFDRAMADY 135
A + + ++ + +ADY
Sbjct: 145 LAKANKLKEKYRKDVADY 162
>gi|968888|dbj|BAA09924.1| HMG-1 [Homo sapiens]
Length = 215
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P++ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRRKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPY 144
>gi|194893856|ref|XP_001977954.1| GG17955 [Drosophila erecta]
gi|195567092|ref|XP_002107106.1| GD17278 [Drosophila simulans]
gi|190649603|gb|EDV46881.1| GG17955 [Drosophila erecta]
gi|194204505|gb|EDX18081.1| GD17278 [Drosophila simulans]
Length = 393
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 255 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVD 313
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 314 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 347
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 174 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 232
Query: 120 IATEKRAEFDRAMADYI 136
+A + + ++ M +Y+
Sbjct: 233 MAEKDKQRYEAEMQNYV 249
>gi|170097113|ref|XP_001879776.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645179|gb|EDR09427.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 114
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+ +A+ +F +D+R + +NPD +GK G KWK + EEK Y +
Sbjct: 25 KKDPNKPKRALSAYMFFSQDWRDRIKAENPDA-GFGEVGKLLGAKWKELDEEEKKPYVEQ 83
Query: 121 ATEK--RAEFDRAMADYIKRKENGKVENSEE 149
A++ RAE +A D K+ +G E EE
Sbjct: 84 ASKDKTRAEEAKAAYDSNKKSASGDEEEDEE 114
>gi|302684321|ref|XP_003031841.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
gi|300105534|gb|EFI96938.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
Length = 114
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+ +A+ +F +D+R+ + +NPD S +GK G KWK M +EK Y
Sbjct: 25 KKDPNAPKRALSAYMFFSQDWRERVKAENPDA-SFGELGKILGAKWKEMDEDEKKPYVAK 83
Query: 121 AT--EKRAEFDRAMADYIKRKENGKVENSEE 149
A ++RAE D+A D K E + + +E
Sbjct: 84 AAKDKERAEADKAAYDEKKSAEASEADEDDE 114
>gi|255725950|ref|XP_002547901.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133825|gb|EER33380.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 358
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D +PK+P A+ F E ++ + +P+ I ++ E W+ ++ E++ Y+ +
Sbjct: 146 DPDLPKRPTNAYLIFCELEKERIKSGDPNASD---ISRSMTEAWRNLSEEDRRPYFKLYE 202
Query: 123 EKRAEFDRAMADYIKRKENGKVE 145
E R + R M +Y +RKE G+ E
Sbjct: 203 EDRIRYQREMTEYHQRKEGGEPE 225
>gi|320585897|gb|EFW98576.1| nucleosome-binding protein [Grosmannia clavigera kw1407]
Length = 94
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 52 TTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTY 111
T K++K+ K D PK+ +A+ +F + R+ +++NP I S +GK GE+WK +
Sbjct: 10 TGKVEKRRSKKDPNAPKRGLSAYMFFANEQRENVRDENPGI-SFGQVGKILGERWKALNE 68
Query: 112 EEKVKYYDIATEKRAEFDRAMADY 135
+++ Y A + ++ A A Y
Sbjct: 69 KQRTPYEAKAAADKKRYEDAKAAY 92
>gi|195040353|ref|XP_001991052.1| GH12282 [Drosophila grimshawi]
gi|193900810|gb|EDV99676.1| GH12282 [Drosophila grimshawi]
Length = 402
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 261 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVD 319
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 320 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 353
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 180 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 238
Query: 120 IATEKRAEFDRAMADYI 136
+A + + +++ M +Y+
Sbjct: 239 MAEKDKQRYEQEMQNYV 255
>gi|410562530|pdb|2LY4|A Chain A, Hmgb1-Facilitated P53 Dna Binding Occurs Via Hmg-BoxP53
Transactivation Domain Interaction And Is Regulated By
The Acidic Tail
Length = 83
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 62 MAKADKARYEREMKTYI 78
>gi|443684506|gb|ELT88434.1| hypothetical protein CAPTEDRAFT_172235 [Capitella teleta]
Length = 734
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +A+F +L + R+ + +NPD + I K G++WK +T +K ++ +A
Sbjct: 546 DPNKPKRPQSAYFLWLNEMREEIKAENPD-AGVTDIAKLAGQRWKEVT--DKTRWEGLAV 602
Query: 123 EKRAEFDRAMADYIKRKEN 141
+ + +++AM +Y+ K +
Sbjct: 603 KAKESYEKAMEEYLANKSD 621
>gi|45198302|ref|NP_985331.1| AFL219Wp [Ashbya gossypii ATCC 10895]
gi|44984189|gb|AAS53155.1| AFL219Wp [Ashbya gossypii ATCC 10895]
gi|374108559|gb|AEY97465.1| FAFL219Wp [Ashbya gossypii FDAG1]
Length = 182
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P T F F D R ++P +K+ I + GEKWK + +++K +Y D+A R
Sbjct: 114 PKRPSTGFILFCNDVRPHVAAEHPLLKTT-DIVRLLGEKWKALPFDKKNRYLDLAARNRE 172
Query: 127 EF 128
++
Sbjct: 173 QW 174
>gi|410256408|gb|JAA16171.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F + R + NP I S+ + K GE W + EK Y A
Sbjct: 89 DPSAPKRPPSGFFLFSSEIRPKIKSTNPGI-SVGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +ADY K GK + +
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGA 169
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|392883890|gb|AFM90777.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
P++PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + +
Sbjct: 94 PRRPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKE 152
Query: 127 EFDRAMADYIKRKEN 141
++++ +A Y R +N
Sbjct: 153 KYEKEVAAYRARCKN 167
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|126274287|ref|XP_001387507.1| Nonhistone chromosomal protein 6A [Scheffersomyces stipitis CBS
6054]
gi|126213377|gb|EAZ63484.1| Nonhistone chromosomal protein 6A, partial [Scheffersomyces
stipitis CBS 6054]
Length = 85
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 52 TTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTY 111
T K K +K D PK+ +A+ +F + R + +NP I S +GK GEKWK +T
Sbjct: 3 TEKRKATRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKALTG 61
Query: 112 EEKVKYYDIATEKRAEFDRAMADY 135
EEK Y + A + +++ A+Y
Sbjct: 62 EEKGPYENKAEADKKRYEKEKAEY 85
>gi|195448286|ref|XP_002071591.1| GK25058 [Drosophila willistoni]
gi|194167676|gb|EDW82577.1| GK25058 [Drosophila willistoni]
Length = 406
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 263 VVGRGKKRKQMKDPNAPKRSLSAFFWFCNDERNKVKALNPEY-GVGDIAKELGRKWSDVD 321
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 322 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 355
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 182 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 240
Query: 120 IATEKRAEFDRAMADYI 136
+A + + ++ M +Y+
Sbjct: 241 MAEKDKQRYETEMQNYV 257
>gi|90103305|gb|ABD85497.1| high mobility group box 1-like [Ictalurus punctatus]
Length = 182
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + +KK D PK+PP+AFF F ++R +E+ P + S+ + K GE W +
Sbjct: 59 VPPRGEKKKRFKDPNAPKRPPSAFFIFCAEYRPKVKEETPGL-SIGDVAKKLGEMWNKTS 117
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENG 142
EEK Y A + + ++++ +A Y K K G
Sbjct: 118 AEEKQPYEKKAAKLKEKYEKDIAAYRKGKVVG 149
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 82 RKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYI 136
R+ ++++PD + K C E+WKTM+ +EK K+ D+A +A ++R M +Y+
Sbjct: 4 REEHKKKHPDTSVNFSEFSKKCSERWKTMSAKEKGKFEDMARLDKARYEREMKNYV 59
>gi|348525340|ref|XP_003450180.1| PREDICTED: high mobility group-T protein-like isoform 2
[Oreochromis niloticus]
Length = 184
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D K P+ +++ YF++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++R M +Y+
Sbjct: 64 KQDKLRYEREMKNYV 78
>gi|195167323|ref|XP_002024483.1| GL15829 [Drosophila persimilis]
gi|194107881|gb|EDW29924.1| GL15829 [Drosophila persimilis]
Length = 173
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 34 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEY-GVGDIAKELGRKWSDVD 92
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKV 144
E K KY +A +A ++R M +Y K +GK+
Sbjct: 93 PEVKQKYESMAERDKARYEREMTEY---KTSGKI 123
>gi|403293162|ref|XP_003937591.1| PREDICTED: high mobility group protein B4 [Saimiri boliviensis
boliviensis]
Length = 254
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 72 PKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 131
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 132 ARYQEEMMNYV 142
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP+ S+ + KA G+ W T EK Y A
Sbjct: 152 DPQAPRRPPSSFLLFCQDHYAQLKRENPNW-SVVQVAKATGKMWSATTDLEKQPYEQRAA 210
Query: 123 EKRAEFDRAMADYIKRKENGK 143
RA++ + Y K+++ K
Sbjct: 211 LLRAKYFEELELYRKQRKQCK 231
>gi|448079731|ref|XP_004194450.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359375872|emb|CCE86454.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
T K + +K D PK+ +A+ +F + R + +NP I S +GK GEKWK M+
Sbjct: 3 TTEKKRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKAMS 61
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKR 138
E+K Y A + +++ A+Y K+
Sbjct: 62 SEDKTPYETKAEADKKRYEKEKAEYAKK 89
>gi|320091041|gb|ADW08807.1| high mobility group box X [Lethenteron camtschaticum]
Length = 225
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
K D PK+PP+AFF F DFR + NP + + I K GE W T E K Y
Sbjct: 93 KKDPNAPKRPPSAFFIFCADFRPQIKADNPGM-VIGTIAKRLGEMWGRQTNENKAPY 148
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNP-DIKSMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D P+ +++ YF++ R+ ++++P D + + C E+WK ++ +EK+++ D+A
Sbjct: 5 DPSKPRGRMSSYAYFVQTCREEHKKKHPNDSVAFTDFSRKCSERWKGLSPKEKLRFEDLA 64
Query: 122 TEKRAEFDRAMADY 135
+ +D M DY
Sbjct: 65 RADKTRYDTEMKDY 78
>gi|402853838|ref|XP_003891595.1| PREDICTED: high mobility group protein B4 [Papio anubis]
Length = 191
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 11 PKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 70
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 71 ARYQEEMMNYV 81
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP S+ + KA G+ W T EK Y A
Sbjct: 91 DPQAPRRPPSSFLLFCQDHYAQLKRENPSW-SVVQVAKATGKMWSATTDLEKHPYEQRAA 149
Query: 123 EKRAEFDRAMADYIKRK 139
RA++ + Y K++
Sbjct: 150 LLRAKYFEELERYRKQR 166
>gi|32527711|gb|AAP86257.1| Ac2-008 [Rattus norvegicus]
Length = 234
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 131 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 190
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A +A ++R M YI K
Sbjct: 191 MAKADKARYEREMKTYIPPK 210
>gi|357139210|ref|XP_003571177.1| PREDICTED: high mobility group B protein 13-like [Brachypodium
distachyon]
Length = 537
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +A+F + ++ R + ++ IGK GE+WK+MT +K Y ++A+
Sbjct: 325 DPSKPKQPMSAYFVYSQERRAALVAEKKNVPE---IGKITGEEWKSMTDAQKAPYEEVAS 381
Query: 123 EKRAEFDRAMADYIKRK 139
+++ E+ + M Y ++K
Sbjct: 382 KQKEEYHKQMEVYKQKK 398
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 62 LDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIA 121
+D PKKP ++F F ++ RK E+ P + + I KWK ++ EK + + A
Sbjct: 449 VDPNRPKKPASSFLLFSKEARKQLVEERPGVNN-STINALISVKWKELSGTEKKTWSEKA 507
Query: 122 TEKRAEFDRAMADY 135
E A + R M +Y
Sbjct: 508 AEGMAAYKREMEEY 521
>gi|109001746|ref|XP_001107984.1| PREDICTED: high mobility group protein B4-like [Macaca mulatta]
gi|67968844|dbj|BAE00779.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 11 PKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 70
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 71 ARYQEEMMNYV 81
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP S+ + KA G+ W T EK Y A
Sbjct: 91 DPQAPRRPPSSFLLFCQDHYAQLKRENPSW-SVVQVAKATGKMWSATTDLEKHPYEQRAA 149
Query: 123 EKRAEFDRAMADYIKRK 139
RA++ + Y K++
Sbjct: 150 LLRAKYFEELELYRKQR 166
>gi|159162034|pdb|1AAB|A Chain A, Nmr Structure Of Rat Hmg1 Hmga Fragment
Length = 83
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 2 KGDPKKPRGKMSSYAFFVQTSREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 62 MAKADKARYEREMKTYI 78
>gi|354470970|ref|XP_003497717.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
Length = 215
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++ + ++P + S+ + K GE W E+K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYCPKIKGEHPGL-SIGDVAKKLGELWNNTAAEDKQPYGKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + + ++ +A Y
Sbjct: 150 KLKEKHEKGIAAY 162
>gi|303282319|ref|XP_003060451.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
gi|226457922|gb|EEH55220.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
Length = 922
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP A+ F D R Q+Q+P++ S + I +W+ + +EK KY
Sbjct: 697 DPNAPKRPPNAYILFSNDARAKLQKQHPEM-SPKEIMSTLAAQWQNASEKEKAKYEAKTK 755
Query: 123 EKRAEFDRAMADYIKRK 139
E + +D A A+Y K K
Sbjct: 756 EAKEAYDVASAEYEKNK 772
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ F D R ++NP++K+ I A G KWK + ++K KY AT +
Sbjct: 808 PKRPLSAYILFSGDARAKVVKENPEMKATEIIA-AIGAKWKAIGAKDKAKYEAKATAAKE 866
Query: 127 EFDRAMADYIKRKENGKVENSEEDSE 152
++D Y K G SEE +E
Sbjct: 867 KYDEEKKSYEASKAAGTESESEEPAE 892
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+P A+ F D R E++P++ SM GK G KW+ + ++K +Y A ++ +
Sbjct: 591 RPANAYMLFANDMRAAVAEEHPEM-SMVERGKVLGAKWRAIGEKDKARYETKAAAEKERY 649
Query: 129 DRAMADYI 136
M Y+
Sbjct: 650 AEEMKHYV 657
>gi|225195621|gb|ACN82088.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+PP+AFF F +FR +E+ P + S+ + K GE W +
Sbjct: 67 IPPKGEKKKRFKDPNAPKRPPSAFFIFCAEFRPKVKEETPGL-SIGDVAKKLGEMWNKTS 125
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKV 144
EEK Y A + ++++ + Y + GKV
Sbjct: 126 SEEKQPYEKKAARLKEKYEKDITAY---RSKGKV 156
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A +A ++R
Sbjct: 2 SSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKLDKARYER 61
Query: 131 AMADYI 136
M +YI
Sbjct: 62 EMKNYI 67
>gi|148682424|gb|EDL14371.1| mCG8587 [Mus musculus]
Length = 130
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
>gi|123481309|ref|XP_001323531.1| HMG box family protein [Trichomonas vaginalis G3]
gi|121906398|gb|EAY11308.1| HMG box family protein [Trichomonas vaginalis G3]
Length = 184
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
K+PP AF F D R+ + +NPD+K++ + + ++WK + EK+ Y +A E++
Sbjct: 37 KRPPNAFLLFCRDKRQSARGENPDMKNVD-VSQVLADQWKNLDDTEKLHYKALAAEQQKL 95
Query: 128 FDRAMADY 135
F DY
Sbjct: 96 FKEENPDY 103
>gi|146412508|ref|XP_001482225.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
gi|146392989|gb|EDK41147.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
Length = 90
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+ +F + R + +NP I + +GK GEKWK M +EKV Y A
Sbjct: 13 DPDAPKRSLSAYMFFANENRDIIRAENPGI-AFGQVGKLLGEKWKAMNADEKVPYETKAE 71
Query: 123 EKRAEFDRAMADYIKR 138
+ +++ A+Y KR
Sbjct: 72 ADKKRYEKEKAEYAKR 87
>gi|336272321|ref|XP_003350917.1| hypothetical protein SMAC_04223 [Sordaria macrospora k-hell]
gi|380090684|emb|CCC04854.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 103
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
K+ + + T K++K+ K D PK+ +A+ +F + R+ +E+NP + + +GK G
Sbjct: 3 KAAAKSKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGV-TFGQVGKILG 61
Query: 104 EKWKTMTYEEKVKY 117
E+WK ++ +++ Y
Sbjct: 62 ERWKALSDKQRAPY 75
>gi|301763549|ref|XP_002917185.1| PREDICTED: high mobility group protein B4-like [Ailuropoda
melanoleuca]
Length = 193
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 11 PKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 70
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 71 ARYQEEMMNYV 81
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP+ S+ + KA G+ W T EK Y A
Sbjct: 91 DPQAPRRPPSSFLLFCQDHYAQLKRENPNW-SVVQVAKASGKMWSATTDAEKQPYEQRAA 149
Query: 123 EKRAEFDRAMADYIKRK 139
RA++ + Y K++
Sbjct: 150 LLRAKYQEELEIYRKQR 166
>gi|320589146|gb|EFX01608.1| chromatin-associated protein [Grosmannia clavigera kw1407]
Length = 593
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
++H K D P++PP+A+ F R+ + QN S I K GE W+T+T E+
Sbjct: 112 RRHPKPDECAPERPPSAYVLFSNKMREKLKGQN---LSFTEIAKLVGENWQTLTPAERKP 168
Query: 117 YYDIATEKRAEFDRAMADYIKRKE 140
Y A + +++ AM Y K E
Sbjct: 169 YETEAQAAKDKYNHAMVVYKKTPE 192
>gi|307170751|gb|EFN62876.1| High mobility group protein 20A [Camponotus floridanus]
Length = 328
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+K D+ PK+P + +F FL D R+ + +NP + + I K +W + ++K
Sbjct: 67 KRKKTPRDATAPKQPLSGYFLFLNDRREKVRSENPSL-TFTEITKLLASEWSKLPGDQKQ 125
Query: 116 KYYDIATEKRAEFDRAMADY 135
+Y D A + + ++R ++Y
Sbjct: 126 QYLDAAEQDKERYNREFSNY 145
>gi|112419177|gb|AAI22328.1| Hmgb3a protein [Danio rerio]
Length = 86
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + PK +A+ YF++ R+ ++++P+I S+ K C +WK MT +EK ++ D
Sbjct: 3 KGDPRKPKGKMSAYAYFVQTCREEHKKKSPEIPVSLSEFSKRCSGRWKAMTDKEKSRFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + + +D+ M Y+
Sbjct: 63 MAKQDKVRYDQEMMHYM 79
>gi|67968790|dbj|BAE00752.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 11 PKANVSSYIHFLLNYRNEFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 70
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 71 ARYQEEMMNYV 81
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP S+ + KA G+ W EK Y A
Sbjct: 91 DPQAPRRPPSSFLLFCQDHYAQLKRENPSW-SVVQVAKATGKMWSATADLEKHPYEQRAA 149
Query: 123 EKRAEFDRAMADYIKRK 139
RA++ + Y K++
Sbjct: 150 LLRAKYFEELELYRKQQ 166
>gi|429860623|gb|ELA35353.1| nucleosome binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 103
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
K+ + + K++KK K D PK+ +A+ +F + R+ +E+NP I S +GK G
Sbjct: 3 KAATKRGAAGKVEKKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKILG 61
Query: 104 EKWKTMTYEEKVKY 117
E+WK + +++ Y
Sbjct: 62 ERWKALNDKQRAPY 75
>gi|19112464|ref|NP_595672.1| HMG box protein [Schizosaccharomyces pombe 972h-]
gi|74638876|sp|Q9USU7.1|YHHB_SCHPO RecName: Full=HMG box-containing protein C28F2.11
gi|6018695|emb|CAB57940.1| HMG box protein [Schizosaccharomyces pombe]
Length = 310
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Query: 28 PTRHSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFR----K 83
P + + A +E +++ V + K + D PK+PP+A+ F ++ R +
Sbjct: 78 PKKATPAAVAPVEATSAVDTSEAVASMTPNKRKARDPAQPKRPPSAYNLFQKNQRSEIKE 137
Query: 84 GFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGK 143
E++ D+K + KA EKW +++ +++ Y + A++ R ++ MA Y KEN
Sbjct: 138 SLGEKSNDVKE---VNKAMHEKWGSLSEDDRKTYEEEASKLREAYEEEMAAYNASKENAS 194
Query: 144 VENS 147
V +S
Sbjct: 195 VADS 198
>gi|357608069|gb|EHJ65806.1| hypothetical protein KGM_13851 [Danaus plexippus]
Length = 719
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P TAF +L + RKG + NP IK + I K GE W+ + ++K ++ + A
Sbjct: 543 DVNAPKRPSTAFMLWLSEHRKGIIDDNPGIK-VTEIAKKGGELWRDL--KDKTQWEEKAN 599
Query: 123 EKRAEFDRAMADY 135
+ + E+++AM Y
Sbjct: 600 KAKEEYNQAMKKY 612
>gi|355778495|gb|EHH63531.1| hypothetical protein EGM_16518 [Macaca fascicularis]
Length = 210
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++P+ + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 154 KYEKDIAAY 162
>gi|367020358|ref|XP_003659464.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
gi|347006731|gb|AEO54219.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
Length = 101
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 47 SAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
+AK + K +KK K D PK+ +A+ +F + R+ +E+NP + S +GK GE+W
Sbjct: 4 AAKGRSGKAEKKRSKKDPNAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILGERW 62
Query: 107 KTMTYEEKVKY 117
K ++ +++ Y
Sbjct: 63 KALSDKQRAPY 73
>gi|344305949|ref|XP_003421652.1| PREDICTED: TOX high mobility group box family member 4-like
[Loxodonta africana]
Length = 619
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
Query: 4 KAANEPKESQSSSASNLKMVLRKRPTRHSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLD 63
+ + P + S ++ R+ P++ +VV G ++ K KK K D
Sbjct: 172 RLSTTPSPTSSLHEDGVEDFRRQLPSQKTVVVEAGKKQ------------KAPKKRRKKD 219
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE 123
P+KP +A+ F D + + QNP+ + + K W ++ E+K Y
Sbjct: 220 PNEPQKPVSAYALFFRDTQAAIKGQNPN-ATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 278
Query: 124 KRAEFDRAMADYIKRKENGKVENSEEDSEFD 154
+ E+ +A+A Y K+N + + + E E D
Sbjct: 279 AKKEYLKALAAY---KDNQECQATVETVELD 306
>gi|400599237|gb|EJP66941.1| HMG box protein [Beauveria bassiana ARSEF 2860]
Length = 96
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
K+ +A + +++KK K D PK+ +A+ +F + R+ +E+NP + S +GK G
Sbjct: 3 KAAAAPKRGARVEKKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILG 61
Query: 104 EKWKTMTYEEKVKY 117
E+WK ++ +++ Y
Sbjct: 62 ERWKALSDKQRTPY 75
>gi|380792505|gb|AFE68128.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 183
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKEIAAY 162
>gi|299741148|ref|XP_001834261.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
gi|298404577|gb|EAU87573.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
Length = 184
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+ +A+ +F +D+R+ + +NPD +GK G KWK + EEK Y ++
Sbjct: 90 KKDPLKPKRALSAYMFFSQDWRERIKAENPDA-GFGEVGKLLGAKWKELDEEEKKPYIEL 148
Query: 121 AT--EKRAEFDRAMADYIKRKENGKVENSEED 150
A ++RAE +++ D +K + EED
Sbjct: 149 ANKDKERAENEKSAYDKGIKKSRANSGSGEED 180
>gi|355691926|gb|EHH27111.1| hypothetical protein EGK_17228 [Macaca mulatta]
Length = 196
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
DS PK+PP+ FF F +F + NP I S+ + K GE WK + EK Y A
Sbjct: 76 DSNAPKRPPSGFFLFSSEFCPKMKSTNPGI-SIGDMVKKLGEMWKNLNDSEKQPYITKAA 134
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +AD K GK + S
Sbjct: 135 KLKEKYEKDVADC---KSKGKFDGS 156
>gi|198469582|ref|XP_001355062.2| GA11488 [Drosophila pseudoobscura pseudoobscura]
gi|198146939|gb|EAL32118.2| GA11488 [Drosophila pseudoobscura pseudoobscura]
Length = 393
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 254 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEY-GVGDIAKELGRKWSDVD 312
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 313 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 346
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 173 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 231
Query: 120 IATEKRAEFDRAMADYI 136
+A + + ++ M +Y+
Sbjct: 232 MAEKDKQRYEAEMQNYV 248
>gi|195393910|ref|XP_002055595.1| GJ19445 [Drosophila virilis]
gi|194150105|gb|EDW65796.1| GJ19445 [Drosophila virilis]
Length = 403
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 262 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEY-GVGDIAKELGRKWSDVD 320
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 321 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 354
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 181 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 239
Query: 120 IATEKRAEFDRAMADYI 136
+A + + ++ M +Y+
Sbjct: 240 MAEKDKQRYETEMQNYV 256
>gi|195134440|ref|XP_002011645.1| GI10980 [Drosophila mojavensis]
gi|193906768|gb|EDW05635.1| GI10980 [Drosophila mojavensis]
Length = 402
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW +
Sbjct: 259 VVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEY-GVGDIAKELGRKWSDVD 317
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
E K KY +A +A ++R M +Y K +GK+ S
Sbjct: 318 PEVKQKYESMAERDKARYEREMTEY---KTSGKIAMS 351
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 178 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 236
Query: 120 IATEKRAEFDRAMADYI 136
+A + + +++ M +Y+
Sbjct: 237 MAEKDKQRYEQEMQNYV 253
>gi|50421411|ref|XP_459256.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
gi|74631679|sp|Q6BRB4.1|NHP6_DEBHA RecName: Full=Non-histone chromosomal protein 6
gi|49654923|emb|CAG87430.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
Length = 92
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+ +F + R + +NP I S +GK GEKWK +T E+K+ Y + A
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKALTPEDKIPYENKAD 73
Query: 123 EKRAEFDRAMADYIKR 138
+ +++ A+Y K+
Sbjct: 74 TDKKRYEKEKAEYAKK 89
>gi|27881711|gb|AAH44715.1| MGC52578 protein [Xenopus laevis]
Length = 212
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ YF++ R+ ++++PD + K C E+WK+M+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKSMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 LAKGDKARYEREMKTYI 79
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
E+E K+ + TK K+K D PK+PP+AFF F + R + + P + S+
Sbjct: 72 EREMKTYIPPKGETKGKRKK---DPNAPKRPPSAFFIFCSEHRPQIKSETPGL-SIGDTA 127
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
K GE W T ++K+ + A + + ++++ +A Y
Sbjct: 128 KKLGELWAEQTPKDKLPHEQKAAKLKEKYEKDVAAY 163
>gi|148223673|ref|NP_001079576.1| HMG-X protein [Xenopus laevis]
gi|639691|dbj|BAA06440.1| HMG-X protein [Xenopus laevis]
Length = 212
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ YF++ R+ ++++PD + K C E+WK+M+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 LAKGDKARYEREMKTYI 79
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
E+E K+ + TK K+K D PK+PP+AFF F + R + + P + S+
Sbjct: 72 EREMKTYIPPKGETKGKRKK---DPNAPKRPPSAFFIFCSEHRPQIKSETPGL-SIGDTA 127
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
K GE W T ++K+ + A + + ++++ +A Y
Sbjct: 128 KKLGELWAEQTPKDKLPHEQKAAKLKEKYEKDVAAY 163
>gi|148673911|gb|EDL05858.1| mCG144566 [Mus musculus]
Length = 240
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 28 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 87
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 88 MAKADKARYEREMKTYI 104
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 116 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 174
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 175 KLKEKYEKDIAAY 187
>gi|303304752|emb|CBD77423.1| high mobility group box 2 protein [Plecoglossus altivelis]
Length = 215
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F D R + +NP I S+ I K GE W T ++K Y A
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRARIKGENPGI-SIGDIAKKLGELWSKQTPKDKQPYEAKAG 150
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 151 KLKEKYEKDVAAY 163
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D P+ +++ +F++ R+ ++++P + K C E+WKTM+ +EKVK+ D+A
Sbjct: 5 DPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDLA 64
Query: 122 TEKRAEFDRAMADYI 136
+ +DR M Y+
Sbjct: 65 KGDKVRYDREMKGYV 79
>gi|57232750|ref|NP_660206.2| high mobility group protein B4 [Homo sapiens]
gi|387912835|sp|Q8WW32.2|HMGB4_HUMAN RecName: Full=High mobility group protein B4
gi|189065201|dbj|BAG34924.1| unnamed protein product [Homo sapiens]
gi|208968483|dbj|BAG74080.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 69 ARYQEEMMNYV 79
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP+ S+ + KA G+ W T T EK Y
Sbjct: 89 DPQEPRRPPSSFLLFCQDHYAQLKRENPNW-SVVQVAKATGKMWSTATDLEKHPY----- 142
Query: 123 EKRAEFDRA 131
E+R RA
Sbjct: 143 EQRVALLRA 151
>gi|281349442|gb|EFB25026.1| hypothetical protein PANDA_005395 [Ailuropoda melanoleuca]
Length = 181
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 9 PKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 69 ARYQEEMMNYV 79
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP+ S+ + KA G+ W T EK Y A
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNW-SVVQVAKASGKMWSATTDAEKQPYEQRAA 147
Query: 123 EKRAEFDRAMADYIKRK 139
RA++ + Y K++
Sbjct: 148 LLRAKYQEELEIYRKQR 164
>gi|15237042|ref|NP_192846.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266789|sp|Q9T012.1|HMG13_ARATH RecName: Full=High mobility group B protein 13; AltName:
Full=Nucleosome/chromatin assembly factor group D 13
gi|4850287|emb|CAB43043.1| 98b like protein [Arabidopsis thaliana]
gi|7267807|emb|CAB81209.1| 98b like protein [Arabidopsis thaliana]
gi|22136604|gb|AAM91621.1| putative 98b protein [Arabidopsis thaliana]
gi|332657570|gb|AEE82970.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 446
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
EK I + T K KKK+E +D PKKP +++F F +D RK E++P I + +
Sbjct: 345 EKTDNIIKKTKETAKNKKKNENVDPNKPKKPTSSYFLFCKDARKSVLEEHPGINN-STVT 403
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRK 139
KW + EEK Y A E + + + +Y K K
Sbjct: 404 AHISLKWMELGEEEKQVYNSKAAELMEAYKKEVEEYNKTK 443
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ + + R + +N KS+ + K GE+WK ++ E+K Y +A + +
Sbjct: 246 PKQPISAYLIYANERRAALKGEN---KSVIEVAKMAGEEWKNLSEEKKAPYDQMAKKNKE 302
Query: 127 EFDRAMADYIKRKENGKVENSEEDSEF 153
+ + M Y + KE + +E+ EF
Sbjct: 303 IYLQEMEGYKRTKEEEAMSQKKEEEEF 329
>gi|426328852|ref|XP_004065350.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4
[Gorilla gorilla gorilla]
Length = 186
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 69 ARYQEEMMNYV 79
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP+ S+ + KA G+ W T T EK Y
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNW-SVVQVAKATGKMWSTATDLEKHPY----- 142
Query: 123 EKRAEFDRA 131
E+R RA
Sbjct: 143 EQRVALLRA 151
>gi|110808604|gb|ABB22048.1| HMBG4 [Homo sapiens]
gi|119627858|gb|EAX07453.1| high-mobility group box 4 [Homo sapiens]
Length = 186
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 69 ARYQEEMMNYV 79
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP+ S+ + KA G+ W T T EK Y
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNW-SVVQVAKATGKMWSTATDLEKHPY----- 142
Query: 123 EKRAEFDRA 131
E+R RA
Sbjct: 143 EQRVALLRA 151
>gi|444726589|gb|ELW67113.1| High mobility group protein B1, partial [Tupaia chinensis]
Length = 219
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ + ++ R+ ++++PD S + K C E+WKTM+ +EK K+ D
Sbjct: 9 KGDPKKPRGKMSSYAFSVQTCREEHKKKHPDASVSFSELSKKCSERWKTMSAKEKGKFED 68
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 69 MAKADKARYEREMKTYI 85
>gi|401626897|gb|EJS44815.1| nhp6bp [Saccharomyces arboricola H-6]
Length = 99
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 49 KRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKT 108
K+ TT+ KK D PK+ +A+ +F + R + +NPD+ + +G+ GE+WK
Sbjct: 14 KKRTTRRKK-----DPNAPKRGLSAYMFFANETRDIVRSENPDV-TFGQVGRILGERWKA 67
Query: 109 MTYEEKVKY 117
+T EEKV Y
Sbjct: 68 LTAEEKVPY 76
>gi|440797991|gb|ELR19065.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 309
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
KK + + K PK+ +A+ YF D R + QNP++K + K E WK ++ E+K K
Sbjct: 157 KKKVRGEEKGPKRARSAYIYFTSDKRAEVKAQNPELK-FGDVTKKLAEAWKALSPEDKQK 215
Query: 117 YYDIATEKRAEFD 129
Y ++A + R FD
Sbjct: 216 YEEMARQDRERFD 228
>gi|351710199|gb|EHB13118.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 191
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NPD+ A K C E+WKT++ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPDVPVNFAEFSKKCSERWKTVSGKEKSKFDEMAKADKVHYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D K+PP+ FF F +F + NP I S+ + K GE W + EK Y
Sbjct: 87 KKDPNATKRPPSGFFLFCSEFHPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITK 145
Query: 121 ATEKRAEFDRAMA 133
A + + ++++ +A
Sbjct: 146 AAKLKEKYEKDVA 158
>gi|432895946|ref|XP_004076239.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 206
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D P+ +++ YF++ R+ ++++PD A K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPTKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYIKRK 139
+ + +DR M Y+ K
Sbjct: 64 RQDKVRYDREMMSYVPAK 81
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F +FR + ++P + ++ + K GE W + + E+K Y A
Sbjct: 90 DPNAPKRPPSAFFIFCSEFRPKVKGESPGL-TIGDVAKRLGEMWNSTSAEDKQPYEKKAA 148
Query: 123 EKRAEFDRAMADYIKRKENG 142
+ + ++ + +A Y + + G
Sbjct: 149 KLKEKYGKDIAAYRAKGKTG 168
>gi|302411796|ref|XP_003003731.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|261357636|gb|EEY20064.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|346978438|gb|EGY21890.1| nucleosome binding protein [Verticillium dahliae VdLs.17]
Length = 102
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 47 SAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
+AKR + K K K D PK+ +A+ +F + R+ +E+NP I S +GK GE+W
Sbjct: 5 AAKRGAGEKKAKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLGERW 63
Query: 107 KTMTYEEKVKY--YDIATEKRAEFDRA 131
K + +++ Y +A +KR E ++A
Sbjct: 64 KALNEKQRGPYEAKAVADKKRYEDEKA 90
>gi|345780695|ref|XP_851529.2| PREDICTED: high mobility group protein B4 [Canis lupus familiaris]
Length = 193
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 11 PKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 70
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 71 ARYQEEMMNYV 81
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP S+ + KA G W + EK Y A
Sbjct: 91 DPQAPRRPPSSFLIFCQDHYAQLKRENPTW-SVVQVAKASGRMWSVTSGAEKQPYEQRAA 149
Query: 123 EKRAEFDRAMADY 135
RA + + Y
Sbjct: 150 VLRARYQEELEVY 162
>gi|307192728|gb|EFN75836.1| High mobility group protein DSP1 [Harpegnathos saltator]
Length = 445
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+KH K D PK+ +AFF+F D R + NP+ + I K G+KW E K
Sbjct: 336 KRKHIK-DHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWSDADPETKS 393
Query: 116 KYYDIATEKRAEFDRAMADYIKRKENG 142
KY +A + +A ++R M Y K+ ++G
Sbjct: 394 KYEAMAEKDKARYEREMTAYKKKMQDG 420
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSM-RAIGKACGEKWKTMTYEEKVKYYDIA 121
DSK P+ TA+ +F++ R+ ++++P+ K + R K C +WKTM+ +EK +++++A
Sbjct: 251 DSK-PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDKEKKRFHEMA 309
Query: 122 TEKRAEFDRAMADYIKRK 139
+ + +D M +Y K
Sbjct: 310 EKDKKRYDAEMQNYTPPK 327
>gi|291413749|ref|XP_002723129.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 219
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ + ++PD + K C E+WKTM+ +E K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKRKHPDSSVNFVEFSKKCSERWKTMSAKENSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADYI 136
++++ +A Y
Sbjct: 154 KYEKDIAAYC 163
>gi|407263446|ref|XP_003084790.3| PREDICTED: uncharacterized protein LOC667284 [Mus musculus]
Length = 424
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 61 KLDSKMPKKP---PTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVK 116
+L+ PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K
Sbjct: 8 QLNMGHPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGK 67
Query: 117 YYDIATEKRAEFDRAMADYI 136
+ D+A +A ++R M YI
Sbjct: 68 FEDMAKADKAHYERKMKTYI 87
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP AFF F ++ + ++P + S+ + K GE W ++K Y A
Sbjct: 100 DPNAPKRPPLAFFLFYSEYYPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 158
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 159 KLKEKYEKDIAAY 171
>gi|346468357|gb|AEO34023.1| hypothetical protein [Amblyomma maculatum]
Length = 734
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D+ PK+PP+A+F +L + R ++ NP S+ + K GE WK +T +K K+ A
Sbjct: 557 DANKPKRPPSAYFLWLAENRDKIKKDNPSF-SITDVTKRAGELWKEVT--DKSKWEQQAV 613
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSE 152
E A++ AMA Y N +S+++ E
Sbjct: 614 EAAAKYKEAMAAYQASLSNRPQNDSDDEKE 643
>gi|403255365|ref|XP_003920409.1| PREDICTED: high mobility group protein B1-like, partial [Saimiri
boliviensis boliviensis]
Length = 159
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
>gi|94966915|ref|NP_001035652.1| high mobility group protein B4 [Bos taurus]
gi|119370723|sp|Q32L34.1|HMGB4_BOVIN RecName: Full=High mobility group protein B4
gi|81673105|gb|AAI09791.1| High-mobility group box 4 [Bos taurus]
gi|296488916|tpg|DAA31029.1| TPA: high mobility group protein B4 [Bos taurus]
Length = 194
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY
Sbjct: 3 KRDQLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A + M +Y
Sbjct: 63 LAKLDKARYQEEMMNYF 79
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D P++PP++F F +D + +NP S+ + KA G+ W T +K Y A
Sbjct: 89 DPHAPRRPPSSFLLFCQDHYAQLKSENPSW-SVVQVAKASGKMWSAKTDVDKQPYEQRAA 147
Query: 123 EKRAEFDRAMADY 135
RA++ ++ Y
Sbjct: 148 LLRAKYREELSVY 160
>gi|332808386|ref|XP_513298.3| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4 [Pan
troglodytes]
Length = 186
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 69 ARYQEEMMNYV 79
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP+ S+ + KA G+ W T+T EK Y
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNW-SVVQVAKATGKMWSTVTDLEKHPY----- 142
Query: 123 EKRAEFDRA 131
E+RA RA
Sbjct: 143 EQRAALLRA 151
>gi|56788496|gb|AAW29969.1| unknown [Sus scrofa]
gi|56792880|gb|AAW30632.1| unknown [Sus scrofa]
Length = 193
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKXAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|3551257|dbj|BAA32827.1| 98b [Daucus carota]
Length = 502
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK P +AFF F+ + R + K++ +GK GE+WK MT +EK Y ++A + +
Sbjct: 290 PKHPVSAFFLFMNERRADLVAEK---KNVLEVGKITGEEWKNMTEKEKAPYEEMAKKNKN 346
Query: 127 EFDRAMADYIKRKE 140
++ + M Y K+K+
Sbjct: 347 QYLQQMEVYKKKKD 360
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 62 LDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIA 121
+D PK+P ++F F ++ RK E+ P I + + KWK +++EEK + + A
Sbjct: 413 VDPNKPKRPASSFLLFSKEARKTISEERPGINN-STLNALISVKWKEISHEEKQLWNEKA 471
Query: 122 TEKRAEFDRAMADYIK 137
+ + M +Y K
Sbjct: 472 AGAMEAYKKEMEEYNK 487
>gi|402078083|gb|EJT73432.1| hypothetical protein GGTG_10270 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 325
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D ++PK+P T FF++++ KGF ++P + + KA +W T+ E+ + D+A
Sbjct: 253 DPRLPKRPMTPFFFYIQ---KGFTPRDPALVKVTDHAKAAASQWNTLGTAERKPFIDMAI 309
Query: 123 EKRAEFD 129
R+ ++
Sbjct: 310 ADRSRYE 316
>gi|26350077|dbj|BAC38678.1| unnamed protein product [Mus musculus]
Length = 181
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|339242839|ref|XP_003377345.1| high mobility group protein 1.2 [Trichinella spiralis]
gi|316973861|gb|EFV57410.1| high mobility group protein 1.2 [Trichinella spiralis]
Length = 229
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+K K D PK+ +AFF+F R Q+ +PD K + + + G WK + +EK
Sbjct: 113 KRKRSKKDPNAPKRALSAFFFFSNSKRAEIQQAHPDWK-VGQVAQELGRMWKAIDEDEKR 171
Query: 116 KYYDIATEKRAEFDRAMADY 135
K+ D+A + R ++ M +Y
Sbjct: 172 KFEDMAAKDRTRYEEDMKNY 191
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 67 PKKPPTAFFYFL----EDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
P+ T + +F+ E+ +K + +N + + K C KWKTMT EEK ++Y++A
Sbjct: 37 PRGKTTPYGFFVKMCYEEHKKKYPNENVQVTE---VSKKCSAKWKTMTQEEKHRFYELAA 93
Query: 123 EKRAEFDRAMADY 135
+ R +D + Y
Sbjct: 94 KDRVRYDAELEAY 106
>gi|148234528|ref|NP_001080836.1| high mobility group box 1 [Xenopus laevis]
gi|32450384|gb|AAH54148.1| Hmgb1-prov protein [Xenopus laevis]
Length = 211
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ YF++ R+ ++++PD A K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + ++R M YI
Sbjct: 63 MAKADKVRYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F +FR + ++P ++ I K GE W ++K+ + A
Sbjct: 91 DPNAPKRPPSAFFLFCSEFRPKIKGEHPG-STIGDIAKKLGEMWNNTATDDKLPFERKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDVAAY 162
>gi|426236473|ref|XP_004012193.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K G+ W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGQMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|148709727|gb|EDL41673.1| mCG9102 [Mus musculus]
Length = 215
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A +A ++R M YI K
Sbjct: 63 MAKADKARYEREMKTYIPTK 82
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ TK + K + D PK+PP+AFF F ++R + ++P + S+ + K GE W
Sbjct: 79 IPTKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTA 137
Query: 111 YEEKVKYYDIATEKRAEFDRAMADY 135
++K Y A + + ++++ +A Y
Sbjct: 138 ADDKQPYEKKAAKLKEKYEKDIAAY 162
>gi|350402647|ref|XP_003486555.1| PREDICTED: high mobility group protein DSP1-like [Bombus impatiens]
Length = 456
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+KH K D PK+ +AFF+F D R + NP+ + I K G+KW E K
Sbjct: 348 KRKHIK-DHNAPKRSLSAFFWFCNDERGKVKMLNPEF-GVGDIAKELGKKWSDADPETKS 405
Query: 116 KYYDIATEKRAEFDRAMADYIKRKENG 142
KY +A + +A ++R M Y K+ ++G
Sbjct: 406 KYEAMAEKDKARYEREMTAYKKKMKDG 432
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSM-RAIGKACGEKWKTMTYEEKVKYYDIA 121
DSK P+ TA+ +F++ R+ ++++P+ K + R K C +WKTM+ +EK +++++A
Sbjct: 263 DSK-PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDKEKKRFHEMA 321
Query: 122 TEKRAEFDRAMADYIKRK 139
+ + +D M +Y K
Sbjct: 322 EKDKKRYDAEMQNYTPPK 339
>gi|440900657|gb|ELR51738.1| High mobility group protein B1 [Bos grunniens mutus]
Length = 224
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A +A ++R M YI K
Sbjct: 63 MAKADKARYEREMKTYIPPK 82
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPY 144
>gi|45361297|ref|NP_989226.1| high mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|38969943|gb|AAH63332.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89267209|emb|CAJ81415.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89272910|emb|CAJ82928.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
Length = 211
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ YF++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + ++R M YI
Sbjct: 63 MAKADKVRYEREMKTYI 79
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 37 VGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMR 96
V E+E K+ + TK K K D PK+PP+AFF F +FR + ++P ++
Sbjct: 69 VRYEREMKTYIPPKGETKKKFK----DPNAPKRPPSAFFLFCSEFRPKIKGEHPG-STIG 123
Query: 97 AIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
I K GE W ++K+ Y A + + ++++ +A Y
Sbjct: 124 DIAKKLGEMWNNTATDDKLPYERKAAKLKEKYEKDVAAY 162
>gi|346327301|gb|EGX96897.1| High mobility group, superfamily [Cordyceps militaris CM01]
Length = 513
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
VT + ++H K D P++PP+A+ F R+ + N S I K GE W+ +
Sbjct: 103 VTKRKYRRHPKSDENAPERPPSAYVLFSNKMREDLKSHN---LSFTEIAKLVGENWQNLD 159
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKEN 141
E+ Y + A + ++ R++ +Y K E+
Sbjct: 160 QGERELYENQANAAKDKYRRSLTEYKKTPEH 190
>gi|380025638|ref|XP_003696576.1| PREDICTED: high mobility group protein DSP1-like [Apis florea]
Length = 420
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+KH K D PK+ +AFF+F D R + NP+ + I K G+KW E K
Sbjct: 312 KRKHIK-DHNAPKRSLSAFFWFCNDERGKVKMLNPEF-GVGDIAKELGKKWSDADPETKS 369
Query: 116 KYYDIATEKRAEFDRAMADYIKRKENG 142
KY +A + +A ++R M Y K+ ++G
Sbjct: 370 KYEAMAEKDKARYEREMTAYKKKMKDG 396
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSM-RAIGKACGEKWKTMTYEEKVKYYDIA 121
DSK P+ TA+ +F++ R+ ++++P+ K + R K C +WKTM+ +EK +++++A
Sbjct: 227 DSK-PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDKEKKRFHEMA 285
Query: 122 TEKRAEFDRAMADYIKRK 139
+ + +D M +Y K
Sbjct: 286 EKDKKRYDAEMQNYTPPK 303
>gi|83014391|ref|XP_918585.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 213
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|380471591|emb|CCF47205.1| HMG box protein [Colletotrichum higginsianum]
Length = 513
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
VT + ++H K D P++PP+A+ F R + +N + I K GE W+ +T
Sbjct: 100 VTKRKYRRHPKPDENAPERPPSAYVLFSNKMRDDLKGRN---LTFTEIAKLVGEHWQNLT 156
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGK 143
EK Y A + + +++ +A+Y K E K
Sbjct: 157 PGEKEPYESSALKAKEKYNHDLAEYKKTAEYRK 189
>gi|167384542|ref|XP_001736998.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900416|gb|EDR26737.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 112
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P T +F +L + R +E++PD K + I K E+WK + EEK +Y A +
Sbjct: 26 PKRPQTPYFLYLHEHRASIKEEHPDAK-VTEIAKIASEQWKALGEEEKKEYQAKADAAKE 84
Query: 127 EFDRAMADYIKRKE 140
++ + M Y +K+
Sbjct: 85 QYKKDMEKYTGKKQ 98
>gi|146218567|gb|AAI40014.1| High-mobility group box 1 [synthetic construct]
gi|146218571|gb|AAI40019.1| High-mobility group box 1 [synthetic construct]
gi|146327050|gb|AAI41845.1| High-mobility group box 1 [Homo sapiens]
Length = 215
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQHYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|426236471|ref|XP_004012192.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 213
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGNVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|145357109|ref|XP_001422765.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583008|gb|ABP01082.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 543
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
KKP TAF F D R + +NP + R +GKA GE+W ++ E K KY
Sbjct: 466 KKPLTAFLAFATDERPSVKAENPTF-NFREVGKALGERWASLDPERKAKY 514
>gi|395850201|ref|XP_003797684.1| PREDICTED: high mobility group protein B1 [Otolemur garnettii]
Length = 289
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A +A ++R M YI K
Sbjct: 63 MAKADKARYEREMKTYIPPK 82
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|296224352|ref|XP_002758030.1| PREDICTED: high mobility group protein B1-like isoform 1
[Callithrix jacchus]
gi|390474708|ref|XP_003734829.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 215
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+ FF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRTPSVFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|169409528|gb|ACA57879.1| High mobility group protein B3 (predicted) [Callicebus moloch]
Length = 193
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + N I S+ + K GE W + +K Y A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNLGI-SIGDVAKKLGEMWNNLNDSKKQPYITKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKVENSEEDSEF 153
+ + ++++ +ADY K GK + ++ ++F
Sbjct: 148 KLKEKYEKDVADY---KSKGKFDGTKGPAKF 175
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP+ A K C E+WK M+ +EK K+ ++A + +D+
Sbjct: 14 SAYAFFVQTCREEHKKKNPEAPVNFAEFSKKCPERWKIMSGKEKSKFDEMAKADKVRYDQ 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|62087576|dbj|BAD92235.1| high-mobility group box 1 variant [Homo sapiens]
Length = 176
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 5 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 64
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A +A ++R M YI K
Sbjct: 65 MAKADKARYEREMKTYIPPK 84
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y
Sbjct: 93 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPY 146
>gi|387016392|gb|AFJ50315.1| High mobility group protein B1 [Crotalus adamanteus]
Length = 215
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ YF++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + ++R M Y+
Sbjct: 63 MARADKVRYEREMKTYV 79
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W + E+K + A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTSSEDKQPFEKKAG 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|291410693|ref|XP_002721624.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 215
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRTPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|51592117|ref|NP_001004034.1| high mobility group protein B1 [Sus scrofa]
gi|123371|sp|P12682.3|HMGB1_PIG RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|164490|gb|AAA31050.1| non-histone protein HMG1 [Sus scrofa]
Length = 215
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKHPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|380793129|gb|AFE68440.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
E+E K+ + TK K K D PK+PP+AFF F ++R + ++P + S+ +
Sbjct: 72 EREMKTYIPPKGETKKKFK----DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVA 126
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
K GE W ++K Y A + + ++++ +A Y
Sbjct: 127 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY 162
>gi|380793127|gb|AFE68439.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|119628863|gb|EAX08458.1| high-mobility group box 1, isoform CRA_b [Homo sapiens]
Length = 206
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|26341410|dbj|BAC34367.1| unnamed protein product [Mus musculus]
Length = 178
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|296810682|ref|XP_002845679.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
gi|238843067|gb|EEQ32729.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
Length = 103
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+ +A+ F + R +E+NP+I + +GK GE+WK ++ +++V Y +
Sbjct: 20 KKDPNAPKRGLSAYMIFANEQRAAVREENPNI-TFGQVGKVLGERWKALSDKQRVPYEEK 78
Query: 121 ATEKRAEFDRAMADYIKRKE 140
A + ++ A Y R+E
Sbjct: 79 AATDKQRYEDEKAAYNSRQE 98
>gi|221045048|dbj|BAH14201.1| unnamed protein product [Homo sapiens]
Length = 174
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A +A ++R M YI K
Sbjct: 63 MAKADKARYEREMKTYIPPK 82
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPY 144
>gi|148673204|gb|EDL05151.1| mCG5336 [Mus musculus]
Length = 216
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W +K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAVYDKQPYGKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|410961840|ref|XP_003987486.1| PREDICTED: LOW QUALITY PROTEIN: TOX high mobility group box family
member 4 [Felis catus]
Length = 623
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
Query: 4 KAANEPKESQSSSASNLKMVLRKRPTRHSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLD 63
+ + P + S ++ R+ P++ +VV G ++ K KK K D
Sbjct: 176 RLSTTPSPTSSLHEDGVEDFRRQIPSQKTVVVEAGKKQ------------KAPKKRXKKD 223
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE 123
P+KP +A+ F D + + QNP+ + + K W ++ E+K Y
Sbjct: 224 PNEPQKPVSAYALFFRDTQAAIKGQNPN-ATFGEVSKIVASMWDSLGEEQKQVYKRKTEA 282
Query: 124 KRAEFDRAMADYIKRKENGKVENSEEDSEFD 154
+ E+ +A+A Y K+N + + + E E D
Sbjct: 283 AKKEYLKALAAY---KDNQECQATVETVELD 310
>gi|403347541|gb|EJY73196.1| hypothetical protein OXYTRI_05674 [Oxytricha trifallax]
Length = 710
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PKKP +A+ YF ++FR+ +EQ+P+ S I + KW+ M ++K Y +A ++
Sbjct: 406 PKKPLSAYIYFSQEFREKLKEQHPEWSS-NEIMRHVSNKWQHMDRQQKDPYNQMAALDKS 464
Query: 127 EFDRAMADYIKRKE 140
+D+ + ++ + E
Sbjct: 465 RYDKQLLEFTQMAE 478
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 34 VAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK 93
V++ I + + I R TK K EK PKKP T + F+ + R +NP+I
Sbjct: 198 VSSQNIIDKERYIQELRELTKSNKNLEK-----PKKPLTPYMLFVRETRPKVVRENPNIA 252
Query: 94 SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
S+ I K G W+ +T +E ++Y+ I ++ E
Sbjct: 253 SL-DIMKEVGRIWQNITKDE-LQYFKIKSDSDME 284
>gi|366998295|ref|XP_003683884.1| hypothetical protein TPHA_0A03740 [Tetrapisispora phaffii CBS 4417]
gi|357522179|emb|CCE61450.1| hypothetical protein TPHA_0A03740 [Tetrapisispora phaffii CBS 4417]
Length = 93
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+ +F + R + +NPD+ S +G+ GEKWK +T EEK+ +
Sbjct: 17 DPNAPKRALSAYMFFANETRDIVKAENPDV-SFGQVGRILGEKWKALTAEEKIPF----- 70
Query: 123 EKRAEFDR 130
E +AE D+
Sbjct: 71 EAKAEADK 78
>gi|229368114|gb|ACQ59037.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 206
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A + +
Sbjct: 8 PKGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSLKEKGKFEDLARQDK 67
Query: 126 AEFDRAMADYI 136
A ++R M YI
Sbjct: 68 ARYEREMMSYI 78
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + + P ++ + K GE W E++ + A
Sbjct: 90 DPNAPKRPPSAFFIFCAEYRPKVKGETPGA-TIGDVAKRLGEMWNGTASEDRQPFEKKAA 148
Query: 123 EKRAEFDRAMADYIKRKENG 142
+ + ++++ +A Y + + G
Sbjct: 149 KLKEKYEKEVAAYRAKTKPG 168
>gi|26342222|dbj|BAC34773.1| unnamed protein product [Mus musculus]
Length = 215
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRLPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|426244704|ref|XP_004016160.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 203
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K G+ W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGQMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|300677968|gb|ADK27291.1| high-mobility-group B1b [Gekko japonicus]
Length = 215
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
KKK E D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K
Sbjct: 86 KKKFE--DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQ 142
Query: 116 KYYDIATEKRAEFDRAMADY 135
Y A + + ++++ +A Y
Sbjct: 143 PYEKKAAKLKEKYEKDIAAY 162
>gi|392343504|ref|XP_003754904.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
gi|392356039|ref|XP_003752197.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
Length = 168
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 63 DSKM-PKKPPTAFFYFLEDFRKGFQEQNPD-IKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
DSK+ PK + + +F+ DFR +EQ P+ + C EKW+T++ +EK KY +
Sbjct: 4 DSKVRPKVNVSPYVHFMMDFRNQMREQQPNSYYDFTEFSRKCSEKWRTISEQEKRKYEAL 63
Query: 121 ATEKRAEFDRAMADY 135
A R + R M +Y
Sbjct: 64 AKRDRDRYQREMRNY 78
>gi|30584163|gb|AAP36330.1| Homo sapiens high-mobility group box 1 [synthetic construct]
gi|54697182|gb|AAV38963.1| high-mobility group box 1 [synthetic construct]
gi|54697184|gb|AAV38964.1| high-mobility group box 1 [synthetic construct]
gi|61367269|gb|AAX42974.1| high-mobility group box 1 [synthetic construct]
gi|61367275|gb|AAX42975.1| high-mobility group box 1 [synthetic construct]
gi|61371572|gb|AAX43692.1| high-mobility group box 1 [synthetic construct]
Length = 216
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|332863449|ref|XP_001169802.2| PREDICTED: high mobility group protein B1-like, partial [Pan
troglodytes]
Length = 174
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|397475678|ref|XP_003809257.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
Length = 165
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F + R + NP I S+ + K GE W + EK Y A
Sbjct: 66 DPSAPKRPPSGFFLFSSEIRPKIKSTNPGI-SVGDVAKKLGEMWNNLNDSEKQPYITKAA 124
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
+ + ++++ +AD K GK + S
Sbjct: 125 KLKEKYEKDVADS---KSKGKFDGS 146
>gi|397482786|ref|XP_003812597.1| PREDICTED: high mobility group protein B4 [Pan paniscus]
Length = 177
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 69 ARYQEEMMNYV 79
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP+ S+ + KA G+ W T+T EK Y
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNW-SVVQVAKATGKMWSTVTDLEKHPY----- 142
Query: 123 EKRAEFDRA 131
E+RA RA
Sbjct: 143 EQRAALLRA 151
>gi|328350132|emb|CCA36532.1| Hepatocyte growth factor-regulated tyrosine kinase substrate
[Komagataella pastoris CBS 7435]
Length = 725
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 45 SISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGE 104
+++ +R T KKK D PK+ +A+ +F + R + +NP I+ IGK GE
Sbjct: 631 TMAERRTKTGRKKK----DPNAPKRSLSAYMFFANEQRDIVRSENPGIQ-FGEIGKLLGE 685
Query: 105 KWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRK 139
KWK + E K Y A E + ++ A+Y K++
Sbjct: 686 KWKALDAEGKAPYESKAEEDKKRYELEKAEYFKKQ 720
>gi|296227498|ref|XP_002759405.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
KKK E D PK+PP+AFF F ++R + ++P + S+ + K G+ W ++K
Sbjct: 86 KKKFE--DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGKMWSNTAADDKQ 142
Query: 116 KYYDIATEKRAEFDRAMADY 135
Y A + + ++++ +A Y
Sbjct: 143 PYEKKAAKLKEKYEKDIAAY 162
>gi|29825377|gb|AAO92280.1| putative HMG-like protein [Dermacentor variabilis]
Length = 208
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 54 KLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEE 113
K KK+ D PK+P +AFF+F D R ++++PD S+ + K G +W + +
Sbjct: 83 KSKKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQESPDA-SVGEVAKELGRRWNEVGDDV 141
Query: 114 KVKYYDIATEKRAEFDRAMADY 135
K KY +A + +A +++ + Y
Sbjct: 142 KSKYEGLAAKDKARYEKELKAY 163
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ ++++P+ + A K C E+WKTM+ EK +++ +A + + FD
Sbjct: 12 SAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSESEKKRFHQMADKDKKRFDT 71
Query: 131 AMADY 135
MADY
Sbjct: 72 EMADY 76
>gi|190195542|gb|ACE73639.1| high-mobility group box 1 (predicted) [Sorex araneus]
Length = 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|74138677|dbj|BAE27155.1| unnamed protein product [Mus musculus]
Length = 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGKHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|159478601|ref|XP_001697391.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158274549|gb|EDP00331.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 99
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP A+ +F ++ R+ + NP+ S+ IG+ GE WK ++K K+ D+A
Sbjct: 18 DPNAPKKPMGAYMWFCKEMREQVKADNPEF-SVTDIGRRLGELWKECEDDDKKKFQDLAD 76
Query: 123 EKRAEFDRAMADYIKRKENGKVE 145
+ + +++ A Y K+++ K E
Sbjct: 77 KDKERYNKENAAYQKKEKEAKSE 99
>gi|343427561|emb|CBQ71088.1| probable NHP6B-nonhistone chromosomal protein [Sporisorium
reilianum SRZ2]
Length = 99
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 45 SISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGE 104
S S ++ TTK KK D PK+P +A+ +F +D R+ + NP+ +G+ G
Sbjct: 11 STSTQKRTTKSKK-----DPAAPKRPLSAYMFFSQDHRERVKTANPEA-GFSDVGRLLGA 64
Query: 105 KWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRK 139
KW M+ EK Y D+A +A + A Y KR+
Sbjct: 65 KWNEMSDAEKKPYNDMANRDKARAEAEKAAYNKRR 99
>gi|90076282|dbj|BAE87821.1| unnamed protein product [Macaca fascicularis]
Length = 123
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
>gi|410904036|ref|XP_003965499.1| PREDICTED: transcription factor 7-like 1-B-like [Takifugu rubripes]
Length = 559
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 32 SVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSK--MPKKPPTAFFYFLEDFRKGFQEQN 89
SV V ++ G S S++ T + +HEK D K KKP AF ++ + R Q
Sbjct: 270 SVAPPVVKQEPGVSNSSQPGTKMPEGQHEKEDDKRFYIKKPLNAFMLYMREERPKVVAQC 329
Query: 90 PDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENG 142
++K I + G++W ++T EE+ KYY++A ++R + + R+ G
Sbjct: 330 -NVKESATINQILGQRWHSLTKEEQAKYYEMARKERLVHSKLYPGWSARENYG 381
>gi|354468511|ref|XP_003496696.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
gi|344237248|gb|EGV93351.1| High mobility group protein B1 [Cricetulus griseus]
Length = 220
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K +
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPF 144
>gi|431920962|gb|ELK18731.1| High mobility group protein B1 [Pteropus alecto]
Length = 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|55639639|ref|XP_509611.1| PREDICTED: high mobility group protein B1 isoform 15 [Pan
troglodytes]
gi|114649261|ref|XP_001140156.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan
troglodytes]
gi|114649265|ref|XP_001140328.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan
troglodytes]
gi|114649269|ref|XP_001140491.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan
troglodytes]
gi|332841128|ref|XP_003314147.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|332841133|ref|XP_003314149.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|397513185|ref|XP_003826902.1| PREDICTED: high mobility group protein B1 isoform 1 [Pan paniscus]
gi|397513187|ref|XP_003826903.1| PREDICTED: high mobility group protein B1 isoform 2 [Pan paniscus]
gi|397513189|ref|XP_003826904.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan paniscus]
gi|397513191|ref|XP_003826905.1| PREDICTED: high mobility group protein B1 isoform 4 [Pan paniscus]
gi|397513193|ref|XP_003826906.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan paniscus]
gi|397513195|ref|XP_003826907.1| PREDICTED: high mobility group protein B1 isoform 6 [Pan paniscus]
gi|397513197|ref|XP_003826908.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan paniscus]
gi|410047671|ref|XP_003952424.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047673|ref|XP_003952425.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047675|ref|XP_003952426.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047677|ref|XP_003952427.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047679|ref|XP_003952428.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047682|ref|XP_003952429.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047686|ref|XP_003952430.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047688|ref|XP_003952431.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
Length = 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|48145843|emb|CAG33144.1| HMGB1 [Homo sapiens]
Length = 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|620098|emb|CAA56631.1| high mobility group protein [Mus musculus]
gi|71681313|gb|AAI00313.1| High mobility group box 1 [Mus musculus]
Length = 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|4504425|ref|NP_002119.1| high mobility group protein B1 [Homo sapiens]
gi|50950133|ref|NP_001002937.1| high mobility group protein B1 [Canis lupus familiaris]
gi|126352708|ref|NP_001075304.1| high mobility group protein B1 [Equus caballus]
gi|281182655|ref|NP_001162380.1| high mobility group protein B1 [Papio anubis]
gi|284005385|ref|NP_001164752.1| high mobility group protein B1 [Oryctolagus cuniculus]
gi|388453289|ref|NP_001252735.1| high mobility group protein B1 [Macaca mulatta]
gi|291397530|ref|XP_002715999.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|291399645|ref|XP_002716268.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|296203653|ref|XP_002748994.1| PREDICTED: high mobility group protein B1 isoform 2 [Callithrix
jacchus]
gi|297714815|ref|XP_002833818.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
gi|332242218|ref|XP_003270282.1| PREDICTED: high mobility group protein B1-like isoform 1 [Nomascus
leucogenys]
gi|332242222|ref|XP_003270284.1| PREDICTED: high mobility group protein B1-like isoform 3 [Nomascus
leucogenys]
gi|332242226|ref|XP_003270286.1| PREDICTED: high mobility group protein B1-like isoform 5 [Nomascus
leucogenys]
gi|332242228|ref|XP_003270287.1| PREDICTED: high mobility group protein B1-like isoform 6 [Nomascus
leucogenys]
gi|332242230|ref|XP_003270288.1| PREDICTED: high mobility group protein B1-like isoform 7 [Nomascus
leucogenys]
gi|332242232|ref|XP_003270289.1| PREDICTED: high mobility group protein B1-like isoform 8 [Nomascus
leucogenys]
gi|344284506|ref|XP_003414007.1| PREDICTED: high mobility group protein B1-like [Loxodonta africana]
gi|348583405|ref|XP_003477463.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
gi|426375079|ref|XP_004054375.1| PREDICTED: high mobility group protein B1-like isoform 1 [Gorilla
gorilla gorilla]
gi|426375081|ref|XP_004054376.1| PREDICTED: high mobility group protein B1-like isoform 2 [Gorilla
gorilla gorilla]
gi|426375083|ref|XP_004054377.1| PREDICTED: high mobility group protein B1-like isoform 3 [Gorilla
gorilla gorilla]
gi|426375085|ref|XP_004054378.1| PREDICTED: high mobility group protein B1-like isoform 4 [Gorilla
gorilla gorilla]
gi|426375087|ref|XP_004054379.1| PREDICTED: high mobility group protein B1-like isoform 5 [Gorilla
gorilla gorilla]
gi|426375089|ref|XP_004054380.1| PREDICTED: high mobility group protein B1-like isoform 6 [Gorilla
gorilla gorilla]
gi|426375091|ref|XP_004054381.1| PREDICTED: high mobility group protein B1-like isoform 7 [Gorilla
gorilla gorilla]
gi|426375093|ref|XP_004054382.1| PREDICTED: high mobility group protein B1-like isoform 8 [Gorilla
gorilla gorilla]
gi|441624073|ref|XP_004088962.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624077|ref|XP_004088963.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624084|ref|XP_004088964.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624090|ref|XP_004088965.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624094|ref|XP_004088966.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|123369|sp|P09429.3|HMGB1_HUMAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|61213476|sp|Q6YKA4.3|HMGB1_CANFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|75076928|sp|Q4R844.3|HMGB1_MACFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|119370722|sp|Q08IE6.3|HMGB1_HORSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028296|sp|B0CM99.1|HMGB1_CALJA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028297|sp|B1MTB0.1|HMGB1_CALMO RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028298|sp|A9RA84.1|HMGB1_PAPAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|32327|emb|CAA31110.1| unnamed protein product [Homo sapiens]
gi|1435197|gb|AAB08987.1| non-histone chromatin protein HMG1 [Homo sapiens]
gi|13097234|gb|AAH03378.1| High-mobility group box 1 [Homo sapiens]
gi|21410205|gb|AAH30981.1| High-mobility group box 1 [Homo sapiens]
gi|30582719|gb|AAP35586.1| high-mobility group box 1 [Homo sapiens]
gi|37380997|gb|AAQ91389.1| high mobility group protein 1 [Homo sapiens]
gi|37548602|gb|AAN11296.1| high mobility group protein B1 [Canis lupus familiaris]
gi|37722533|gb|AAN11319.1| high mobility group B1 protein [Canis lupus familiaris]
gi|44890726|gb|AAH66889.1| High-mobility group box 1 [Homo sapiens]
gi|45709178|gb|AAH67732.1| High-mobility group box 1 [Homo sapiens]
gi|51476884|emb|CAH18408.1| hypothetical protein [Homo sapiens]
gi|54697178|gb|AAV38961.1| high-mobility group box 1 [Homo sapiens]
gi|60654989|gb|AAX32058.1| high mobility group box 1 [synthetic construct]
gi|61357252|gb|AAX41359.1| high-mobility group box 1 [synthetic construct]
gi|67968740|dbj|BAE00728.1| unnamed protein product [Macaca fascicularis]
gi|115354285|dbj|BAF33339.1| high-mobility group box 1 [Equus caballus]
gi|119628862|gb|EAX08457.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628864|gb|EAX08459.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628865|gb|EAX08460.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628866|gb|EAX08461.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628867|gb|EAX08462.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|121073803|gb|ABM47301.1| high mobility group box 1 protein [Homo sapiens]
gi|152112978|gb|ABS29271.1| high-mobility group box 1 [Homo sapiens]
gi|158256420|dbj|BAF84183.1| unnamed protein product [Homo sapiens]
gi|162415900|gb|ABX89266.1| high-mobility group box 1 (predicted) [Papio anubis]
gi|165934066|gb|ABY74560.1| high-mobility group box 1 (predicted) [Callithrix jacchus]
gi|169402702|gb|ACA53510.1| high-mobility group box 1 (predicted) [Callicebus moloch]
gi|183396417|gb|ACC62098.1| high-mobility group box 1 (predicted) [Rhinolophus ferrumequinum]
gi|193783763|dbj|BAG53745.1| unnamed protein product [Homo sapiens]
gi|196050399|gb|ACG64310.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
gi|216397586|gb|ACJ72830.1| high-mobility group box 1 (predicted) [Oryctolagus cuniculus]
gi|261858262|dbj|BAI45653.1| high-mobility group box 1 [synthetic construct]
gi|335775462|gb|AEH58580.1| high mobility group protein B1-like protein [Equus caballus]
gi|351700460|gb|EHB03379.1| High mobility group protein B1 [Heterocephalus glaber]
gi|387542840|gb|AFJ72047.1| high mobility group protein B1 [Macaca mulatta]
Length = 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|402854944|ref|XP_003892110.1| PREDICTED: high mobility group protein B1-like isoform 1 [Papio
anubis]
gi|402854946|ref|XP_003892111.1| PREDICTED: high mobility group protein B1-like isoform 2 [Papio
anubis]
Length = 214
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|397495503|ref|XP_003818592.1| PREDICTED: high mobility group protein B1-like [Pan paniscus]
Length = 209
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|384247648|gb|EIE21134.1| SSrecog-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 659
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PKK +AF +F R +++NPDI S +GKA G+KWK ++ EK KY ++A + +
Sbjct: 564 PKKALSAFMFFSSAKRDEVKKENPDI-SFGEVGKALGDKWKNISATEKAKYDEMAKKDKV 622
Query: 127 EFDRA 131
+ +A
Sbjct: 623 RYAKA 627
>gi|348551709|ref|XP_003461672.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
Length = 214
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|109510563|ref|XP_001059688.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343404|ref|XP_003754879.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 213
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|41386729|ref|NP_788785.1| high mobility group protein B1 [Bos taurus]
gi|410947173|ref|XP_003980327.1| PREDICTED: high mobility group protein B1 [Felis catus]
gi|123367|sp|P10103.3|HMGB1_BOVIN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|417|emb|CAA31284.1| unnamed protein product [Bos taurus]
gi|73586656|gb|AAI02930.1| HMGB1 protein [Bos taurus]
gi|146231904|gb|ABQ13027.1| high-mobility group box 1 [Bos taurus]
gi|296481787|tpg|DAA23902.1| TPA: high mobility group protein B1 [Bos taurus]
Length = 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|6754208|ref|NP_034569.1| high mobility group protein B1 [Mus musculus]
gi|6981026|ref|NP_037095.1| high mobility group protein B1 [Rattus norvegicus]
gi|407262920|ref|XP_003945388.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
gi|52783618|sp|P63159.2|HMGB1_RAT RecName: Full=High mobility group protein B1; AltName:
Full=Amphoterin; AltName: Full=Heparin-binding protein
p30; AltName: Full=High mobility group protein 1;
Short=HMG-1
gi|52783747|sp|P63158.2|HMGB1_MOUSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|9082303|gb|AAF82799.1|AF275734_1 amphoterin [Rattus norvegicus]
gi|53382|emb|CAA78042.1| non-histone chromosomal high-mobility group 1 protein [Mus
musculus]
gi|56365|emb|CAA68526.1| unnamed protein product [Rattus norvegicus]
gi|202885|gb|AAA40729.1| Amphoterin [Rattus norvegicus]
gi|208488|gb|AAA73006.1| high mobility group 1 protein [synthetic construct]
gi|437102|gb|AAA20508.1| HMG-1 [Mus musculus]
gi|13879238|gb|AAH06586.1| High mobility group box 1 [Mus musculus]
gi|14250281|gb|AAH08565.1| High mobility group box 1 [Mus musculus]
gi|26332344|dbj|BAC29902.1| unnamed protein product [Mus musculus]
gi|26351305|dbj|BAC39289.1| unnamed protein product [Mus musculus]
gi|38512146|gb|AAH61779.1| High mobility group box 1 [Rattus norvegicus]
gi|51859468|gb|AAH81839.1| High mobility group box 1 [Rattus norvegicus]
gi|52789475|gb|AAH83067.1| High mobility group box 1 [Mus musculus]
gi|54648288|gb|AAH85090.1| High mobility group box 1 [Mus musculus]
gi|56788766|gb|AAH88402.1| High mobility group box 1 [Rattus norvegicus]
gi|61403558|gb|AAH91741.1| High mobility group box 1 [Mus musculus]
gi|62739258|gb|AAH94030.1| High mobility group box 1 [Mus musculus]
gi|74186113|dbj|BAE34226.1| unnamed protein product [Mus musculus]
gi|84040262|gb|AAI10668.1| Hmgb1 protein [Mus musculus]
gi|84105496|gb|AAI11469.1| High mobility group box 1 [Mus musculus]
gi|149034811|gb|EDL89531.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034812|gb|EDL89532.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034813|gb|EDL89533.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|195539712|gb|AAI68143.1| High mobility group box 1 [Rattus norvegicus]
Length = 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|297665615|ref|XP_002811141.1| PREDICTED: high mobility group protein B4 [Pongo abelii]
Length = 189
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + C EKW++++ EK KY +A +
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFEEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 69 ARYQEEMMNYV 79
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
KK K D + P++PP++F F +D + +NP+ S+ + KA G+ W T EK
Sbjct: 83 KKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNW-SVVQVAKATGKMWSAATDLEKHP 141
Query: 117 YYDIATEKRAEFDRAMADYIKRK 139
Y A RA++ + Y K++
Sbjct: 142 YEQRAALLRAKYFEELELYRKQR 164
>gi|157822723|ref|NP_001102933.1| high mobility group protein B4 [Rattus norvegicus]
gi|149023997|gb|EDL80494.1| rCG31445 [Rattus norvegicus]
Length = 181
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDI-KSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +F+ +FR F+EQ P+ + + C EKW++++ EK K+ IA +
Sbjct: 9 PKVNVSSYIHFMINFRNKFKEQQPNTYLTFNEFSRRCSEKWRSISKNEKAKFEAIAKLDK 68
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 69 ARYQEEMMNYV 79
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D P+KPP++F F D +++NP+ ++ + KA G+ W +T +K Y A
Sbjct: 89 DPLAPRKPPSSFLLFSLDHFAKLKQENPNWTVVQ-VAKAAGKMWSMITDVDKRPYEQKAA 147
Query: 123 EKRAEFDRAMADYIKRKENGKV 144
RA++ + Y+ + +N K+
Sbjct: 148 IMRAKYFQEREAYLSQCQNSKI 169
>gi|312190937|gb|ADQ43367.1| HMGBb [Litopenaeus vannamei]
Length = 206
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 62 LDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDI 120
+DSK P+ +A+ +F++ R+ ++++PD + + + C E+WKTMT +EK ++YD+
Sbjct: 7 VDSK-PRGRMSAYAFFVQTCREEHKKKHPDENVVFSEFSRKCAERWKTMTDKEKDRFYDM 65
Query: 121 ATEKRAEFDRAMADY 135
A + +A +D M Y
Sbjct: 66 ADKDKARYDTEMKGY 80
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 42 EGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKA 101
E K R +K+ + D PK+ +AFF+F D R + NPD+ + + K
Sbjct: 76 EMKGYRGPRTPRVSRKRRNRKDPNAPKRALSAFFWFCNDERAKVRAANPDM-GVGDVAKQ 134
Query: 102 CGEKWKTMTYEEKVKYYDIATEKRAEFDRAM 132
G W E K KY +A + +++ M
Sbjct: 135 LGAAWSNTPPEAKAKYEALAASDKERYEKEM 165
>gi|37779034|gb|AAP20177.1| high mobility group protein [Pagrus major]
Length = 200
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K KK D PK+PP+AFF F DFR + P + S+ K GE W + +
Sbjct: 78 IPPKGHKKKRFKDPNAPKRPPSAFFLFCADFRPKVKGDYPGL-SIGDTAKKLGEMWNSSS 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVEN 146
EEK Y A + + ++D+ D + + GKV++
Sbjct: 137 AEEKQPYEKKAAKLKEKYDK---DIVAYRTKGKVDS 169
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D K P+ +++ YF++ R+ ++++P+ A K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPKKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKRCSERWKTMSPKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYIKRKENGK 143
+ ++R M +YI K + K
Sbjct: 64 KLDKVRYEREMKNYIPPKGHKK 85
>gi|343427904|emb|CBQ71429.1| related to NHP6B-nonhistone chromosomal protein [Sporisorium
reilianum SRZ2]
Length = 252
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 49 KRVTTKLKKKHEKL-DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWK 107
K+++ K+K ++L D PK+PP+A+ F + R+ ++++P + +GK E WK
Sbjct: 154 KKISKAQKRKEKRLRDPDAPKRPPSAYLLFQNEVRQEIRKKHPGMPYSEVLGK-VSEAWK 212
Query: 108 TMTYEEKVKYYDIATEKRAEFDRAMADY 135
+T E++ Y D TE +++ D+
Sbjct: 213 ALTDEQRRVYQDKTTENMVTWNQQKKDH 240
>gi|156837652|ref|XP_001642846.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113421|gb|EDO14988.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query: 48 AKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWK 107
+K+ TT+ KK D PK+ +A+ +F + R + +NPD+ S +G+ GEKWK
Sbjct: 7 SKKRTTRRKK-----DPNAPKRALSAYMFFANETRDIVRAENPDV-SFGQVGRILGEKWK 60
Query: 108 TMTYEEKVKYYDIATEKRAEFDR 130
+T E+KV + E +AE D+
Sbjct: 61 ALTPEDKVPF-----EAKAEADK 78
>gi|551090|gb|AAA50238.1| DNA-binding protein [Drosophila melanogaster]
Length = 393
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
KK+ + D PK+ +AFF+F D R + NP+ + I K G KW + E K
Sbjct: 260 KKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVDPEVKQ 318
Query: 116 KYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
KY +A +A ++R M +Y K +GK+ S
Sbjct: 319 KYESMAERDKARYEREMTEY---KTSGKIAMS 347
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D+K P+ TA+ YF++ R+ ++++PD + A + C E+WKTM +EK ++++
Sbjct: 174 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 232
Query: 120 IATEKRAEFDRAMADYI 136
+A + + ++ M +Y+
Sbjct: 233 MAEKDKQRYEAEMQNYV 249
>gi|157820087|ref|NP_001102843.1| high mobility group box 1 like [Rattus norvegicus]
gi|149043247|gb|EDL96779.1| rCG50935 [Rattus norvegicus]
Length = 214
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ + Y
Sbjct: 150 KLKEKYEKDIPAY 162
>gi|600761|gb|AAA57042.1| high mobility group 1 protein [Mus musculus]
Length = 215
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|74181373|dbj|BAE29962.1| unnamed protein product [Mus musculus]
Length = 215
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ + ++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKRKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|449270893|gb|EMC81539.1| High mobility group protein B2 [Columba livia]
Length = 207
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ YF++ R+ ++++PD + + C E+WKTM+ +EK K+ +
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKGDKARYDREMKNYV 79
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + R + +P + S+ K GE W + ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|432102789|gb|ELK30264.1| High mobility group protein B1 [Myotis davidii]
Length = 245
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A +A ++R M YI K
Sbjct: 63 MAKADKARYEREMKTYIPPK 82
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|40352857|gb|AAH64790.1| Hmgb1 protein [Mus musculus]
Length = 215
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|148922135|gb|AAI46745.1| Zgc:165618 protein [Danio rerio]
Length = 165
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++R M +YI
Sbjct: 64 KQDKVRYEREMKNYI 78
>gi|440298682|gb|ELP91313.1| hypothetical protein EIN_153200 [Entamoeba invadens IP1]
Length = 185
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP TA+ +L + R +E+ PD+K + + K GE WK M E+K Y D A
Sbjct: 96 DPNKPKKPQTAYMLYLNEHRAEIKEKFPDMK-VTEVAKKAGENWKAMGEEDKKPYQDKAD 154
Query: 123 EKRAEFDRAMADYIKRKEN 141
+ + + M Y ++K+
Sbjct: 155 KAKETWKTEMKKYEEKKDG 173
>gi|18088957|gb|AAH21180.1| High-mobility group box 4 [Homo sapiens]
gi|312150396|gb|ADQ31710.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P + + C EKW++++ EK KY +A +
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPSTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 69 ARYQEEMMNYV 79
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP+ S+ + KA G+ W T T EK Y
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNW-SVVQVAKATGKMWSTATDLEKHPY----- 142
Query: 123 EKRAEFDRA 131
E+R RA
Sbjct: 143 EQRVALLRA 151
>gi|332025497|gb|EGI65660.1| High mobility group protein DSP1 [Acromyrmex echinatior]
Length = 305
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+KH K D PK+ +AFF+F D R + NP+ + I K G+KW E K
Sbjct: 193 KRKHIK-DHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWSDADPETKS 250
Query: 116 KYYDIATEKRAEFDRAMADYIKRKEN 141
KY +A + +A ++R M Y K+ +N
Sbjct: 251 KYEAMAEKDKARYEREMTAYKKKMQN 276
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSM-RAIGKACGEKWKTMTYEEKVKYYDIA 121
DSK P+ TA+ +F++ R+ ++++P+ K + R K C +WKTM+ EK +++++A
Sbjct: 108 DSK-PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHEMA 166
Query: 122 TEKRAEFDRAMADYIKRK 139
+ + +D M +Y K
Sbjct: 167 EKDKKRYDTEMQNYTPPK 184
>gi|194068385|dbj|BAG55013.1| high mobility group 1 protein [Saccostrea kegaki]
Length = 201
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+F FL DFR+ + +N D K I K GE W+ + EK + +A +++
Sbjct: 98 PKRPQSAYFCFLADFREKMKGKNIDHKE---IIKMAGEAWRNLDDNEKKPFEKLAQKEQE 154
Query: 127 EFDRAMADY 135
++++A+AD+
Sbjct: 155 KYEQALADW 163
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%)
Query: 50 RVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTM 109
RV + +K + D PK+ +A+FYFL R+ + I + K KW M
Sbjct: 2 RVGAEGGRKRKAKDPNKPKRSTSAYFYFLGKMREDAKSSGKPITKIAEFTKESSAKWAKM 61
Query: 110 TYEEKVKYYDIATEKRAEFDRAMADY 135
T ++K + A + +D MA Y
Sbjct: 62 TDKDKEPFNKKAAADKKRYDAEMAVY 87
>gi|45382755|ref|NP_990817.1| high mobility group protein B2 [Gallus gallus]
gi|123373|sp|P26584.2|HMGB2_CHICK RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|211927|gb|AAA48818.1| non-histone chromosomal protein [Gallus gallus]
Length = 207
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ YF++ R+ ++++PD + + C E+WKTM+ +EK K+ +
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKGDKARYDREMKNYV 79
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + R + +P + S+ K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGL-SIGDTAKKLGEMWSEQLAKDKQPYEQKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|334323271|ref|XP_003340370.1| PREDICTED: high mobility group protein B1-like [Monodelphis
domestica]
Length = 216
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFQD 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + ++R M YI
Sbjct: 63 MAKADKVHYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ ++++ +A Y
Sbjct: 150 ILKEKYEKDIAAY 162
>gi|291399740|ref|XP_002716281.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 243
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDRKKPRGKMSSYAFFVQTCREEHKKRHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
E+E K+ + TK K K D PK+PP+AFF F ++R + ++P + S+ +
Sbjct: 72 EREMKTYIPPKGETKKKFK----DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVA 126
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
K GE W ++K Y A + + ++++ A Y
Sbjct: 127 KKLGEMWNNTAADDKQPYERKAAKLKGKYEKDTAAY 162
>gi|992639|gb|AAB08831.1| high mobility group protein-2 (HMG-2) [Ambystoma mexicanum]
Length = 216
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ YF++ R+ ++++PD A K C E+WKTM +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMNAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + +DR M Y+
Sbjct: 63 MAKGDKVRYDREMKSYV 79
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF F + R + P + S+ K GEKW T ++K+ ++
Sbjct: 92 DPNAPKRLPSAFFLFCSEHRLKIKADCPGL-SIGDTAKKLGEKWSEQTPKDKIPSFEQKA 150
Query: 123 EKRAE-FDRAMADYIKRKENGKVE 145
K E +++ +A Y + GKV+
Sbjct: 151 AKLKEKYEKDIAAY---RAKGKVD 171
>gi|310793467|gb|EFQ28928.1| HMG box protein [Glomerella graminicola M1.001]
Length = 103
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
K+ + + K+ KK K D PK+ +A+ +F + R+ +E+NP I S +GK G
Sbjct: 3 KASTKRGAAGKVDKKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKILG 61
Query: 104 EKWKTMTYEEKVKY 117
E+WK + +++ Y
Sbjct: 62 ERWKALNDKQRAPY 75
>gi|321476548|gb|EFX87508.1| hypothetical protein DAPPUDRAFT_306496 [Daphnia pulex]
Length = 191
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
T + K+ + D PK+ +AFF+F D R +EQ+P+ ++ I K G +W
Sbjct: 86 ATGRGTKRKQVKDPNAPKRSLSAFFWFCHDLRGHVKEQHPEY-TLGEIAKELGRRWGVSD 144
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRK 139
K +Y A + RA ++R M Y K K
Sbjct: 145 DATKAQYAAKAEQDRARYERDMNAYKKSK 173
>gi|392563521|gb|EIW56700.1| HMG-box [Trametes versicolor FP-101664 SS1]
gi|392563525|gb|EIW56704.1| HMG-box [Trametes versicolor FP-101664 SS1]
gi|392563535|gb|EIW56714.1| HMG-box [Trametes versicolor FP-101664 SS1]
Length = 116
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 39 IEKEGKSISAKRVTTKLKKKHE---KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSM 95
+ KE + +R TK K + K D K PK+ +A+ +F +D+R+ + +NPD
Sbjct: 1 MPKETTKTTKRRAATKQDKAPKAKGKKDPKAPKRALSAYMFFSQDWRERIKAENPDA-GF 59
Query: 96 RAIGKACGEKWKTMTYEEKVKYYDIAT 122
IGK G KWK + +EK Y D A
Sbjct: 60 GEIGKLLGAKWKELDDDEKKPYLDQAA 86
>gi|390463605|ref|XP_003733066.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 214
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + +++ +A Y
Sbjct: 150 KLKEKYEMDIAAY 162
>gi|413943061|gb|AFW75710.1| hypothetical protein ZEAMMB73_996127 [Zea mays]
Length = 95
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 24 LRKRPTRHSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRK 83
+RK P R+ +G KS A++ T K K K D PK+ P AFF + +FRK
Sbjct: 4 VRKGPGRYGREFKLGGGLAVKSKGAEKPTKGRKAKAGK-DPNKPKRAPNAFFVLMGEFRK 62
Query: 84 GFQEQNPDIKSMRAI 98
F+E+NP IKS+ A+
Sbjct: 63 EFKEKNPKIKSVAAV 77
>gi|149245546|ref|XP_001527250.1| hypothetical protein LELG_02079 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449644|gb|EDK43900.1| hypothetical protein LELG_02079 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 187
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D +PK+P A+ F E ++ + +P+ K + + E WK+++ EE+ YY +
Sbjct: 67 DPDLPKRPSNAYLVFCEQEKERLKLDDPESKD---LSRTMTEAWKSLSEEERRPYYKLYE 123
Query: 123 EKRAEFDRAMADYIKRKE 140
+ R + R M +Y ++KE
Sbjct: 124 DDRVRYQREMDEYNRKKE 141
>gi|291415754|ref|XP_002724114.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ +
Sbjct: 27 KGDPNKPRDKMSSYAFFVQMCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFEN 86
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 87 MAKSDKARYDREMKNYV 103
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A
Sbjct: 115 DPNAPKRPPSAFFLFCSEHRPEIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAA 173
Query: 123 EKRAEFDRAMADYI 136
+ + ++++ +A Y
Sbjct: 174 KLKEKYEKDIAAYC 187
>gi|310790717|gb|EFQ26250.1| HMG box protein [Glomerella graminicola M1.001]
Length = 500
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
VT + ++H K D P++PP+A+ F R + +N + I K GE W+ +T
Sbjct: 100 VTKRKYRRHPKPDENAPERPPSAYVLFSNKMRDDLKGRN---LTFTEIAKLVGEHWQNLT 156
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKE 140
EK Y A + + +++ +A+Y K E
Sbjct: 157 PGEKEPYETSALKAKEKYNHDLAEYKKTAE 186
>gi|225195617|gb|ACN82086.1| high-mobility group box 1 [Carassius auratus]
gi|225195619|gb|ACN82087.1| high-mobility group box 1 [Megalobrama amblycephala]
gi|225195623|gb|ACN82089.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+PP+AFF F +FR +E+ P + S+ + K GE W +
Sbjct: 67 IPPKGEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGL-SIGDVAKKLGEMWNKTS 125
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKV 144
EEK + A + ++++ + Y + GKV
Sbjct: 126 AEEKQPFEKKAARLKEKYEKDITAY---RSKGKV 156
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A + + ++R
Sbjct: 2 SSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKQDKVRYER 61
Query: 131 AMADYI 136
M +YI
Sbjct: 62 EMKNYI 67
>gi|401623234|gb|EJS41340.1| nhp6ap [Saccharomyces arboricola H-6]
Length = 93
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+ +A+ +F + R + +NPDI + +GK GEKWK +T EEK+ Y
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDI-TFGQVGKKLGEKWKALTPEEKLPY 70
>gi|392352276|ref|XP_003751165.1| PREDICTED: high mobility group protein B1 [Rattus norvegicus]
Length = 187
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPY 144
>gi|345488851|ref|XP_001601519.2| PREDICTED: hypothetical protein LOC100117216 [Nasonia vitripennis]
Length = 393
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 65 KMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEK 124
K+P+ P AF F ++RK +NP +S + I G +WKTM E K KY+ +A E
Sbjct: 116 KIPR-PANAFMLFANEWRKKLAVENPR-ESNKDISVRLGVRWKTMPKELKEKYFALAREV 173
Query: 125 RAEFDRAMADYI 136
AE R DY+
Sbjct: 174 DAEHKRKYPDYV 185
>gi|3600053|gb|AAC35540.1| contains similarity to HMG (high mobility group) box (Pfam:
HMG_box.hmm, scores: 70.67, 53.09 and 80.15)
[Arabidopsis thaliana]
Length = 401
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 52 TTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTY 111
T K KKK+E +D PKKP +++F F +D RK E++P I + + KW +
Sbjct: 312 TAKNKKKNENVDPNKPKKPTSSYFLFCKDARKSVLEEHPGINN-STVTAHISLKWMELGE 370
Query: 112 EEKVKYYDIATEKRAEFDRAMADYIKRK 139
EEK Y A E + + + +Y K K
Sbjct: 371 EEKQVYNSKAAELMEAYKKEVEEYNKTK 398
>gi|239606992|gb|EEQ83979.1| nucleosome binding protein [Ajellomyces dermatitidis ER-3]
Length = 105
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 53 TKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYE 112
TK++ + +K D PK+ +A+ +F + R +E+NP I S +GK GE+WK + +
Sbjct: 10 TKVRGEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGI-SFGQVGKVLGERWKALNEK 68
Query: 113 EKVKYYDIATEKRAEFDRAMADYIKRK 139
++ Y A + ++ A Y R+
Sbjct: 69 QRAPYEAKAAADKKRYEDEKASYNARR 95
>gi|340923867|gb|EGS18770.1| hypothetical protein CTHT_0053790 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 576
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 42 EGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKA 101
+G+ VT + ++H K D P++PP+A+ F R+ + +N M K
Sbjct: 94 DGREPVTMIVTKRKYRRHPKPDENAPERPPSAYVLFANKMREDLKGRNLSFTEM---AKL 150
Query: 102 CGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVE 145
GE W+ +T EEK Y A + ++ +A+Y K E K +
Sbjct: 151 VGENWQNLTPEEKEPYETQAQRCKDKYLAELAEYKKTPEYRKYQ 194
>gi|157129203|ref|XP_001655323.1| high mobility group B1, putative [Aedes aegypti]
gi|108872320|gb|EAT36545.1| AAEL011380-PA [Aedes aegypti]
Length = 278
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ D PK+ +AFF+F D R + NP+ + I K G KW M
Sbjct: 116 VVGRGKKRKAFKDPNAPKRSLSAFFWFCHDERNKVKALNPEY-GVGDIAKELGRKWSDMD 174
Query: 111 YEEKVKYYDIATEKRAEFDRAMADY 135
E K KY +A + +A +++ M +Y
Sbjct: 175 AEVKSKYEQMAEKDKARYEQEMTEY 199
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ TA+ +F++ R+ ++++P+ + + A + C E+WKTM +EK +++++A + +
Sbjct: 40 PRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMAEKDK 99
Query: 126 AEFDRAMADYI 136
++ M +Y+
Sbjct: 100 QRYELEMQNYV 110
>gi|351698366|gb|EHB01285.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 211
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F+++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQNCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+ + +DR M +Y+
Sbjct: 63 MPKSYKTRYDREMKNYV 79
>gi|221485710|gb|EEE23991.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221502922|gb|EEE28632.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 651
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKS-MRAIGKACGEKWKTMTYEEKVKYYD 119
K D PKKP +++ +F +D R ++ P +KS + +GK GE+W ++ +K+ Y
Sbjct: 572 KKDPNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQKMTYQK 631
Query: 120 IATEKRAEFDRAMADYIKRK 139
A +++ + R M+ Y K+K
Sbjct: 632 KAEQEKIRYQREMSLYNKKK 651
>gi|383858172|ref|XP_003704576.1| PREDICTED: high mobility group protein DSP1-like [Megachile
rotundata]
Length = 433
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+KH K D PK+ +AFF+F D R + NP+ + I K G+KW E K
Sbjct: 325 KRKHIK-DLNAPKRSLSAFFWFCSDERGKVKMLNPEF-GVGDIAKELGKKWSDADPETKS 382
Query: 116 KYYDIATEKRAEFDRAMADYIKRKENG 142
KY +A + +A ++R M Y K+ ++G
Sbjct: 383 KYEAMAEKDKARYEREMTAYKKKMKDG 409
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSM-RAIGKACGEKWKTMTYEEKVKYYDIA 121
DSK P+ TA+ +F++ R+ +++++P+ K + R K C WKTM+ +EK +++++A
Sbjct: 240 DSK-PRGRMTAYAFFVQTCRQEYKKKHPEEKIVFREFSKKCAMSWKTMSDKEKKRFHEMA 298
Query: 122 TEKRAEFDRAMADYIKRK 139
+ + +D M +Y K
Sbjct: 299 EKDKKRYDAEMQNYTPPK 316
>gi|71027705|ref|XP_763496.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350449|gb|EAN31213.1| high mobility group protein, putative [Theileria parva]
Length = 94
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDI-KSMRAIGKACGEKWKTMTYEEK 114
K K K D PK+ +++ +F ++ R +NPD+ + + A+GK G W ++ EK
Sbjct: 12 KSKRAKKDPNAPKRALSSYMFFAKEKRAELVRENPDLARDVAAVGKLVGAAWNSLDESEK 71
Query: 115 VKYYDIATEKRAEFDRAMADYIK 137
Y +A RA +++ A Y K
Sbjct: 72 APYEKLAEADRARYEKEKAAYNK 94
>gi|326918606|ref|XP_003205579.1| PREDICTED: high mobility group protein B2-like [Meleagris
gallopavo]
Length = 246
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ YF++ R+ ++++PD + + C E+WKTM+ +EK K+ ++A +A +DR
Sbjct: 52 SSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGDKARYDR 111
Query: 131 AMADYI 136
M +Y+
Sbjct: 112 EMKNYV 117
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + R + +P + S+ K GE W + ++K Y A
Sbjct: 129 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAA 187
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 188 KLKEKYEKDIAAY 200
>gi|392337480|ref|XP_003753270.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343959|ref|XP_003748829.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 215
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCED 62
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A +A ++R M YI K
Sbjct: 63 MAKADKARYEREMKTYIPHK 82
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y +A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWTNTAADDKQPYGKMAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|332254661|ref|XP_003276450.1| PREDICTED: high mobility group protein B4 [Nomascus leucogenys]
Length = 189
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C E+W++++ EK KY +A +
Sbjct: 9 PKANVSSYVHFLLNYRNTFKEQQPNTYVGFKEFSRKCSEEWRSISKHEKAKYEALAKVDK 68
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 69 ARYQEEMMNYV 79
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP+ S+ + KA GE W T T EK Y
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNW-SVVQVAKATGEMWSTTTDLEKHPY----- 142
Query: 123 EKRAEFDRA 131
E+RA RA
Sbjct: 143 EQRAALLRA 151
>gi|109469081|ref|XP_001074673.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|293346414|ref|XP_002726304.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392346830|ref|XP_003749644.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 213
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WK M+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKAMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
>gi|213515010|ref|NP_001133971.1| High mobility group protein B3 [Salmo salar]
gi|209156012|gb|ACI34238.1| High mobility group protein B3 [Salmo salar]
gi|223648118|gb|ACN10817.1| High mobility group protein B3 [Salmo salar]
Length = 206
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
KK K D PK+P + FF F D R + Q+P + + + K GE+W +T K
Sbjct: 83 KKGRKKDPNAPKRPSSGFFIFCADHRPKIKAQHPSL-GIGDVAKKLGEQWNNLTDATKQP 141
Query: 117 YYDIATEKRAEFDRAMADY 135
Y A + + ++ + +ADY
Sbjct: 142 YLIKANKLKDKYQKDVADY 160
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ YF++ R+ +++ P+I A K C +WKTM+ +EK K+ D+A + +
Sbjct: 9 PKGKMSSYAYFVQTCREEHKKKTPEIPVNFAEFSKKCSGRWKTMSGKEKGKFDDMAKQDK 68
Query: 126 AEFDRAMADYIKRKENGK 143
+D M + + G+
Sbjct: 69 VRYDNEMMHFAPGGKKGR 86
>gi|358391632|gb|EHK41036.1| hypothetical protein TRIATDRAFT_259074 [Trichoderma atroviride IMI
206040]
Length = 101
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
K+ S KR KK+ +K D PK+ +A+ +F + R+ +E+NP I S +GK G
Sbjct: 3 KAASGKRGAKDTKKRAKK-DPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLG 60
Query: 104 EKWKTMTYEEKVKY 117
E+WK + +++ Y
Sbjct: 61 ERWKALNDKQRAPY 74
>gi|320165273|gb|EFW42172.1| structure-specific recognition protein 1 [Capsaspora owczarzaki
ATCC 30864]
Length = 796
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP +++ + + R F+ +NPD M +G G WK + EK + + AT
Sbjct: 676 DKNAPKKPMSSYMLWANENRAAFKAKNPDANVME-LGSILGNAWKELGESEKNSWAEKAT 734
Query: 123 EKRAEFDRAMADYIKRK 139
E R ++ +A+Y ++K
Sbjct: 735 EARKAYEITLAEYEQKK 751
>gi|167744990|pdb|2YRQ|A Chain A, Solution Structure Of The Tandem Hmg Box Domain From Human
High Mobility Group Protein B1
Length = 173
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 12 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 71
Query: 122 TEKRAEFDRAMADYI 136
+A ++R M YI
Sbjct: 72 KADKARYEREMKTYI 86
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 98 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 156
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 157 KLKEKYEKDIAAY 169
>gi|148680808|gb|EDL12755.1| mCG1036273 [Mus musculus]
Length = 105
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYI 136
+A ++R M YI
Sbjct: 66 TDKAHYEREMKTYI 79
>gi|322706965|gb|EFY98544.1| high-mobility group 20A [Metarhizium anisopliae ARSEF 23]
Length = 460
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
VT + ++H K D P++PP+A+ F R+ ++ N + I K GE W+++
Sbjct: 104 VTKRKYRRHPKPDENSPERPPSAYVLFSNKMRETLKDHN---LTFTEIAKLVGENWQSLR 160
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKE 140
EEK + A + +++R + +Y K E
Sbjct: 161 PEEKDVFESQANFAKEKYNRELTEYKKTPE 190
>gi|405963576|gb|EKC29138.1| FACT complex subunit SSRP1 [Crassostrea gigas]
Length = 757
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +A+F + R+ ++ PDI S+ + K GE WK M +K ++ + A
Sbjct: 556 DPNAPKRPQSAYFLWFNANREELKKDTPDI-SITDLSKKAGEVWKQMEDTDKTEWNEKAA 614
Query: 123 EKRAEFDRAMADYIKRK 139
E + E+++AM +Y +K
Sbjct: 615 EAKKEYEKAMEEYKAKK 631
>gi|260803411|ref|XP_002596583.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
gi|229281842|gb|EEN52595.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
Length = 710
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKK TAF +L R +++NPD S+ IGK GEKW+ M +K ++ A
Sbjct: 543 DPNAPKKAMTAFMLWLNATRSELRKENPD-ASIGEIGKIAGEKWREMGPSDKEEWEQKAK 601
Query: 123 EKRAEFDRAMADYIKRK 139
E + + AM +Y RK
Sbjct: 602 EDKERYKAAMEEYQARK 618
>gi|156542951|ref|XP_001601977.1| PREDICTED: high mobility group protein 20A-like [Nasonia
vitripennis]
Length = 335
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 47 SAKRVTTKLKK-KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEK 105
SA T K KK K D+ PK+P T +F FL D R+ + +NP + I + +
Sbjct: 59 SANNSTGKAKKRKRCPRDATAPKQPLTGYFRFLNDRREKVRSENPTMP-FSEITRQLAAE 117
Query: 106 WKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
W + + K +Y D A + + ++R DY
Sbjct: 118 WNVLPADIKQQYLDAAEQDKERYNREFNDY 147
>gi|407040433|gb|EKE40132.1| HMG (high mobility group) box domain containing protein [Entamoeba
nuttalli P19]
gi|449710647|gb|EMD49684.1| HMG (high mobility group) box domain containing protein, putative
[Entamoeba histolytica KU27]
Length = 89
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K+P +A+F + +D RK E NP +K+ I K GEKWK ++ +EK KY D+
Sbjct: 21 KRPLSAYFLYSKDVRKSVVEANPTLKNTE-IMKIIGEKWKGLSDQEKKKYNDL 72
>gi|386783721|gb|AFJ24755.1| high mobility group-2 [Schmidtea mediterranea]
Length = 192
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K K E D PK P TAFF+F + R+ +E+NP+ K + I K G+ W ++K
Sbjct: 87 KAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFK-VGDIAKVLGKMWSEC--KDKS 143
Query: 116 KYYDIATEKRAEFDRAMADY 135
KY ++ E + +++ AM +Y
Sbjct: 144 KYEEMNKEAKEKYNLAMLEY 163
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 62 LDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDI 120
+++K P +A+ + + R+ ++++NPD K + I K EKWK ++ +EK KY +
Sbjct: 1 MNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVL 60
Query: 121 ATEKRAEFDRAMADY 135
A + + + M Y
Sbjct: 61 AQADKKRYTKEMEGY 75
>gi|332245567|ref|XP_003271930.1| PREDICTED: high mobility group protein B3 [Nomascus leucogenys]
Length = 177
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ + K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|225703820|gb|ACO07756.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 193
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAE 127
K+PP+AFF F DFR + ++P + S+ K G W + EEK Y A + +
Sbjct: 95 KRPPSAFFIFCADFRAKIKSEHPGL-SIGDTAKKLGVMWNSSAAEEKKPYEKKAATLKEK 153
Query: 128 FDRAMADYIKRKENGKVENS 147
+D+ +A Y + NG+V+ +
Sbjct: 154 YDKDIASY---RTNGRVDTA 170
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R +++ P+ A K C E+WK M+ +EK + D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCRAEHKKKQPEASVNFAEFSKKCSERWKPMSPKEKGTFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++R M +YI
Sbjct: 64 KQDKVRYEREMKNYI 78
>gi|389593823|ref|XP_003722160.1| putative high mobility group protein homolog tdp-1 [Leishmania
major strain Friedlin]
gi|321438658|emb|CBZ12417.1| putative high mobility group protein homolog tdp-1 [Leishmania
major strain Friedlin]
Length = 299
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 58 KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
K EK PK + + F+ + R+ + ++PD+K+ + + G WK ++ EEK +Y
Sbjct: 107 KKEKKPDDYPKGALSPYIIFVNENREKLKAKHPDMKNTDLLSE-MGNLWKKVSEEEKSRY 165
Query: 118 YDIATEKRAEFDRAMADYIKR 138
+A E + +DR MA YI R
Sbjct: 166 QKLADEDKLRYDREMAAYIAR 186
>gi|402875874|ref|XP_003901718.1| PREDICTED: high mobility group protein B2-like, partial [Papio
anubis]
Length = 248
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ +E++PD A K C E+WKTM+ +EK K+
Sbjct: 38 KGDPNKPRGKMSSYAFFVQTCREEHKEKHPDSSVGFAEFSKKCSERWKTMSAKEKSKFEG 97
Query: 120 IATEKRAEFDRAMADYI 136
+A + +DR M +Y+
Sbjct: 98 MAKSGKVRYDREMKNYV 114
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + S+ K GE W + ++K Y A + +
Sbjct: 130 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSQQSAKDKQPYEQKAAKLKE 188
Query: 127 EFDRAMADY 135
++++ +A Y
Sbjct: 189 KYEKDIAAY 197
>gi|237842875|ref|XP_002370735.1| high mobility group protein, putative [Toxoplasma gondii ME49]
gi|211968399|gb|EEB03595.1| high mobility group protein, putative [Toxoplasma gondii ME49]
Length = 644
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKS-MRAIGKACGEKWKTMTYEEKVKYYD 119
K D PKKP +++ +F +D R ++ P +KS + +GK GE+W ++ +K+ Y
Sbjct: 565 KKDPNAPKKPLSSYMFFAKDKRAEILKKQPTLKSDIGKVGKMIGEEWAKLSSSQKMTYQK 624
Query: 120 IATEKRAEFDRAMADYIKRK 139
A +++ + R M+ Y K+K
Sbjct: 625 KAEQEKIRYQREMSLYNKKK 644
>gi|345318648|ref|XP_001512288.2| PREDICTED: high mobility group protein B3-like [Ornithorhynchus
anatinus]
Length = 97
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|195123163|ref|XP_002006078.1| GI18750 [Drosophila mojavensis]
gi|193911146|gb|EDW10013.1| GI18750 [Drosophila mojavensis]
Length = 734
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
DS PK+P TAF +L + R+ + NP IK + I K GE WK + ++K K+ ++A+
Sbjct: 557 DSNKPKRPTTAFMLWLSETREQIKRDNPGIK-VTEIAKKGGEMWKEL--KDKSKWEELAS 613
Query: 123 EKRAEFDRAMADY 135
+ + + AM +Y
Sbjct: 614 KDKQRYQDAMRNY 626
>gi|238880555|gb|EEQ44193.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 310
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 33 VVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDI 92
+ A G K S TT K+K D +PK+P A+ F E ++ ++ +P+
Sbjct: 122 IALASGSSKSSNGPSDVASTTMGKQKAR--DPDLPKRPTNAYLIFCEMEKERIKQDDPNA 179
Query: 93 KSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRK 139
+ K+ E WK ++ E + YY + + R + R MA+Y ++K
Sbjct: 180 SDL---SKSMTEAWKNLSEERRRPYYKLYEDDRIRYQREMAEYNQKK 223
>gi|255083979|ref|XP_002508564.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
gi|226523841|gb|ACO69822.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
Length = 288
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK P A+ F++ R NPD+K I K GE+WK M + Y +A
Sbjct: 114 DPNKPKGPKGAYMCFVQIARPKINAANPDLK-FAEIAKMLGEQWKNMDTTTRAGYEKMAE 172
Query: 123 EKRAEFDRAMADYIKRKENG 142
+ + + R +A Y+ E G
Sbjct: 173 QDKERYQREIAAYVPMSEAG 192
>gi|408397883|gb|EKJ77020.1| hypothetical protein FPSE_02664 [Fusarium pseudograminearum CS3096]
Length = 537
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
++H K D P++PP+A+ F R+ + QN + I K GE W+ + EK
Sbjct: 107 RRHPKPDENAPERPPSAYVLFSNKMREDLRSQN---LTFTEIAKLVGENWQNLNASEKEA 163
Query: 117 YYDIATEKRAEFDRAMADYIK 137
Y A + ++ R + +Y K
Sbjct: 164 YESQANADKEKYHRDLVEYKK 184
>gi|392881260|gb|AFM89462.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVTKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|358379174|gb|EHK16855.1| hypothetical protein TRIVIDRAFT_217092 [Trichoderma virens Gv29-8]
Length = 102
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
K ++KR KK K D PK+ +A+ +F + R+ +E+NP I S +GK G
Sbjct: 3 KVAASKRGAKDGGKKRTKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLG 61
Query: 104 EKWKTMTYEEKVKY 117
E+WK + +++ Y
Sbjct: 62 ERWKALNDKQRAPY 75
>gi|323307721|gb|EGA60984.1| Abf2p [Saccharomyces cerevisiae FostersO]
Length = 124
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+F +L+D R F ++NP ++ I K GEKW+ + + K KY + +
Sbjct: 43 PKRPTSAYFLYLQDHRSQFVKENPTLRPAE-ISKIAGEKWQNLEADIKEKYISERKKLYS 101
Query: 127 EFDRAMADY 135
E+ +A ++
Sbjct: 102 EYQKAKKEF 110
>gi|392881066|gb|AFM89365.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|392873666|gb|AFM85665.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|167519036|ref|XP_001743858.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777820|gb|EDQ91436.1| predicted protein [Monosiga brevicollis MX1]
Length = 671
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 49 KRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKT 108
+R KLK K L +PKKP +AF + +D R+ Q D + + I KA ++WK
Sbjct: 220 RRQPGKLKAK--DLYPNIPKKPMSAFLLWAQDARETIAAQI-DSRQAKHIQKALSDRWKE 276
Query: 109 MTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGK 143
++ EEK Y ATE ++ MA + + K
Sbjct: 277 LSAEEKQPYQSAATENMTKYYAEMAQFYESNPQAK 311
>gi|146092993|ref|XP_001466608.1| putative high mobility group protein homolog tdp-1 [Leishmania
infantum JPCM5]
gi|398018683|ref|XP_003862506.1| high mobility group protein homolog tdp-1, putative [Leishmania
donovani]
gi|134070971|emb|CAM69647.1| putative high mobility group protein homolog tdp-1 [Leishmania
infantum JPCM5]
gi|322500736|emb|CBZ35813.1| high mobility group protein homolog tdp-1, putative [Leishmania
donovani]
Length = 302
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 39 IEKEGKSISAKRV---------------TTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRK 83
I+KE + +SA+R+ + K EK PK + + F+ + R+
Sbjct: 73 IQKEKEDVSARRLKRERSPSSTKKSKKDKESARGKKEKKPDDYPKGALSPYIIFVNENRE 132
Query: 84 GFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKR 138
+ ++PD+K+ + + G WK + EEK +Y +A E + +DR MA YI R
Sbjct: 133 KLKAKHPDMKNTDLLSE-MGNLWKKASEEEKSRYQKLADEDKLRYDREMAAYIAR 186
>gi|392873904|gb|AFM85784.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + +
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKC 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|322797840|gb|EFZ19748.1| hypothetical protein SINV_09636 [Solenopsis invicta]
Length = 203
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+KH K D PK+ +AFF+F D R + NP+ + I K G+KW E K
Sbjct: 91 KRKHIK-DHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWSDADPETKS 148
Query: 116 KYYDIATEKRAEFDRAMADYIKRKEN 141
KY +A + +A ++R M Y K+ +N
Sbjct: 149 KYEAMAEKDKARYEREMTAYKKKMQN 174
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSM-RAIGKACGEKWKTMTYEEKVKYYDIA 121
DSK P+ TA+ +F++ R+ ++++P+ K + R K C +WKTM+ EK +++++A
Sbjct: 6 DSK-PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHEMA 64
Query: 122 TEKRAEFDRAMADYI 136
+ + +D M +Y
Sbjct: 65 EKDKKRYDTEMQNYT 79
>gi|31873563|emb|CAD97768.1| hypothetical protein [Homo sapiens]
Length = 127
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 44 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 103
Query: 131 AMADY 135
M DY
Sbjct: 104 EMKDY 108
>gi|392884250|gb|AFM90957.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|392878084|gb|AFM87874.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|392877754|gb|AFM87709.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|387913840|gb|AFK10529.1| high mobility group protein B1-like protein [Callorhinchus milii]
gi|392873522|gb|AFM85593.1| high mobility group protein [Callorhinchus milii]
gi|392873780|gb|AFM85722.1| high mobility group protein [Callorhinchus milii]
gi|392873902|gb|AFM85783.1| high mobility group protein [Callorhinchus milii]
gi|392873908|gb|AFM85786.1| high mobility group protein [Callorhinchus milii]
gi|392873950|gb|AFM85807.1| high mobility group protein [Callorhinchus milii]
gi|392873998|gb|AFM85831.1| high mobility group protein [Callorhinchus milii]
gi|392874244|gb|AFM85954.1| high mobility group protein [Callorhinchus milii]
gi|392874940|gb|AFM86302.1| high mobility group protein [Callorhinchus milii]
gi|392876248|gb|AFM86956.1| high mobility group protein [Callorhinchus milii]
gi|392876254|gb|AFM86959.1| high mobility group protein [Callorhinchus milii]
gi|392876362|gb|AFM87013.1| high mobility group protein [Callorhinchus milii]
gi|392876946|gb|AFM87305.1| high mobility group protein [Callorhinchus milii]
gi|392877468|gb|AFM87566.1| high mobility group protein [Callorhinchus milii]
gi|392877522|gb|AFM87593.1| high mobility group protein [Callorhinchus milii]
gi|392877744|gb|AFM87704.1| high mobility group protein [Callorhinchus milii]
gi|392879776|gb|AFM88720.1| high mobility group protein [Callorhinchus milii]
gi|392880382|gb|AFM89023.1| high mobility group protein [Callorhinchus milii]
gi|392880776|gb|AFM89220.1| high mobility group protein [Callorhinchus milii]
gi|392881032|gb|AFM89348.1| high mobility group protein [Callorhinchus milii]
gi|392881292|gb|AFM89478.1| high mobility group protein [Callorhinchus milii]
gi|392881318|gb|AFM89491.1| high mobility group protein [Callorhinchus milii]
gi|392883640|gb|AFM90652.1| high mobility group protein [Callorhinchus milii]
gi|392883646|gb|AFM90655.1| high mobility group protein [Callorhinchus milii]
gi|392883680|gb|AFM90672.1| high mobility group protein [Callorhinchus milii]
gi|392883988|gb|AFM90826.1| high mobility group protein [Callorhinchus milii]
gi|392884098|gb|AFM90881.1| high mobility group protein [Callorhinchus milii]
gi|392884156|gb|AFM90910.1| high mobility group protein [Callorhinchus milii]
gi|392884178|gb|AFM90921.1| high mobility group protein [Callorhinchus milii]
gi|392884306|gb|AFM90985.1| high mobility group protein [Callorhinchus milii]
gi|392884308|gb|AFM90986.1| high mobility group protein [Callorhinchus milii]
gi|392884314|gb|AFM90989.1| high mobility group protein [Callorhinchus milii]
gi|392884420|gb|AFM91042.1| high mobility group protein [Callorhinchus milii]
gi|392884450|gb|AFM91057.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|389633953|ref|XP_003714629.1| hypothetical protein MGG_01641 [Magnaporthe oryzae 70-15]
gi|351646962|gb|EHA54822.1| hypothetical protein MGG_01641 [Magnaporthe oryzae 70-15]
gi|440474541|gb|ELQ43278.1| hypothetical protein OOU_Y34scaffold00162g47 [Magnaporthe oryzae
Y34]
gi|440479757|gb|ELQ60505.1| hypothetical protein OOW_P131scaffold01287g37 [Magnaporthe oryzae
P131]
Length = 537
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 48 AKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWK 107
A VT + ++H K D P++PP+A+ F R +++N + I K GE W+
Sbjct: 104 ATVVTKRKYRRHPKADENAPERPPSAYVLFSNKTRDDLKDRN---LTFTEIAKLVGENWQ 160
Query: 108 TMTYEEKVKYYDIATEKRAEFDRAMADY 135
+T EK Y A + +++ +A+Y
Sbjct: 161 ALTPAEKEPYETQAQTAKEKYNADLAEY 188
>gi|74638955|sp|Q9UVL1.1|NHP6_CANAL RecName: Full=Non-histone chromosomal protein 6
gi|6273391|gb|AAF06350.1|AF196333_1 nonhistone protein 6 [Candida albicans]
gi|238881668|gb|EEQ45306.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 92
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+ +F + R + +NP I S +GK GEKWK + E+K+ Y + A
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKALNSEDKLPYENKAE 73
Query: 123 EKRAEFDRAMADYIKR 138
+ +++ A+Y K+
Sbjct: 74 ADKKRYEKEKAEYAKK 89
>gi|302497713|ref|XP_003010856.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
gi|291174401|gb|EFE30216.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
Length = 106
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+ +A+ F + R +E+NP+I + +GK GE+WK ++ +++V Y +
Sbjct: 18 KKDPNAPKRGLSAYMIFANEQRAAVREENPNI-TFGQVGKVLGERWKALSDKQRVPYEEK 76
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENSEEDSE 152
A + ++ A Y N + S +D E
Sbjct: 77 AATDKQRYEDEKAAY-----NTNINQSRQDDE 103
>gi|478813|pir||S29857 nonhistone chromosomal protein HMG-1 - human
gi|184251|gb|AAA64970.1| HMG-1 [Homo sapiens]
Length = 216
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPTGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYI 136
+A ++R M YI
Sbjct: 66 ADKARYEREMKTYI 79
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRLPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|119584724|gb|EAW64320.1| hCG26831 [Homo sapiens]
Length = 212
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPTGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYI 136
+A ++R M YI
Sbjct: 66 ADKARYEREMKTYI 79
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRLPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|109098276|ref|XP_001102554.1| PREDICTED: high mobility group protein B1-like [Macaca mulatta]
Length = 215
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
++ +A ++R M YI
Sbjct: 63 MSKADKARYEREMKTYI 79
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|241954210|ref|XP_002419826.1| high-mobility group non-histone chromosomal protein, putative
[Candida dubliniensis CD36]
gi|223643167|emb|CAX42041.1| high-mobility group non-histone chromosomal protein, putative
[Candida dubliniensis CD36]
Length = 92
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+ +F + R + +NP I S +GK GEKWK + E+K+ Y + A
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKALNSEDKLPYENKAE 73
Query: 123 EKRAEFDRAMADYIKR 138
+ +++ A+Y K+
Sbjct: 74 ADKKRYEKEKAEYAKK 89
>gi|392876742|gb|AFM87203.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEEGGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|351715817|gb|EHB18736.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 165
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ + + +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSLYAFFVQTCREEHKKKHPDASINFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A +A ++R M YI K
Sbjct: 63 MAKADKARYEREMKTYIPPK 82
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+PP+AFF F ++ + ++P + S+ + K GE W ++K Y
Sbjct: 91 DPNAPKRPPSAFFLFYSEYCPQIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPY 144
>gi|148238271|ref|NP_001081794.1| high mobility group protein-1 [Xenopus laevis]
gi|709959|gb|AAC59859.1| high mobility group protein-1 [Xenopus laevis]
Length = 210
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 37 VGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMR 96
V E+E KS + TK + K D PK+PP+AFF F DFR + ++P ++
Sbjct: 68 VRYEREMKSYIPPKGETKKRFK----DPNAPKRPPSAFFLFCSDFRPKIKGEHPG-STIG 122
Query: 97 AIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
I K GE W ++K+ Y A + + ++++ +A Y
Sbjct: 123 DIAKKLGEMWNNTATDDKLPYERRAAKLKEKYEKDVAAY 161
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ YF++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMS-KEKTKFED 61
Query: 120 IATEKRAEFDRAMADYI 136
+A + ++R M YI
Sbjct: 62 MAKADKVRYEREMKSYI 78
>gi|395526464|ref|XP_003765383.1| PREDICTED: high mobility group protein B4 [Sarcophilus harrisii]
Length = 207
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL + R +EQ P+ + + K C EKWKT++ EK KY IA +
Sbjct: 8 PKVNLSSYVHFLLNCRNKHKEQQPNAYINFKEFSKRCSEKWKTISKHEKSKYEAIARLDK 67
Query: 126 AEFDRAMADYI 136
A + + M +Y+
Sbjct: 68 ARYQKEMKNYV 78
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K PK+PP++FF F + + NP S+ + K GE W + ++K Y + A
Sbjct: 92 DPKAPKRPPSSFFLFSREHYTKIKSDNPHW-SVVQVAKLLGEMWSKKSEQDKQPYEEKAA 150
Query: 123 EKRAEFDRAMADY 135
RA++ + + Y
Sbjct: 151 RLRAKYHQELMTY 163
>gi|49115548|gb|AAH73449.1| HMG-1 protein [Xenopus laevis]
Length = 210
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 37 VGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMR 96
V E+E KS + TK + K D PK+PP+AFF F DFR + ++P ++
Sbjct: 68 VRYEREMKSYIPPKGETKKRFK----DPNAPKRPPSAFFLFCSDFRPKIKGEHPG-STIG 122
Query: 97 AIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
I K GE W ++K+ Y A + + ++++ +A Y
Sbjct: 123 DIAKKLGEMWNNTATDDKLPYERRAAKLKEKYEKDVAAY 161
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ YF++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMS-KEKTKFED 61
Query: 120 IATEKRAEFDRAMADYI 136
+A + ++R M YI
Sbjct: 62 MAKADKVRYEREMKSYI 78
>gi|444729709|gb|ELW70116.1| High mobility group protein B1 [Tupaia chinensis]
Length = 215
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M +I
Sbjct: 63 MAKADKAHYEREMKTFI 79
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|148704837|gb|EDL36784.1| mCG125662 [Mus musculus]
Length = 154
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ ++ +F++ R+ ++++PD + K C E+WKTM+ +EK ++ D
Sbjct: 27 KGDPKKPRGKMSSNAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGRFED 86
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 87 MAKADKARYEREMKTYI 103
>gi|449667750|ref|XP_004206636.1| PREDICTED: FACT complex subunit Ssrp1-like [Hydra magnipapillata]
Length = 220
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE 123
S +PKKP AF + ++ R EQNP I S + + K KW M+ +K Y+D+ +
Sbjct: 97 SSIPKKPLNAFIRYCQEIRDEVDEQNPGI-SRQDLTKVISYKWNAMSSSDKEIYFDLFDK 155
Query: 124 KRAEFDRAMADYIKR 138
+ ++ M Y ++
Sbjct: 156 DKQRYEEEMKQYTQQ 170
>gi|449681405|ref|XP_002159252.2| PREDICTED: FACT complex subunit SSRP1-like [Hydra magnipapillata]
Length = 774
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AF ++ + R+ + NP I + I K GE+WKT+T +K K+ ++A
Sbjct: 543 DENAPKRPMSAFMLYMNEVREKIKADNPGI-AFTDIAKKGGEQWKTLT--DKTKWENMAK 599
Query: 123 EKRAEFDRAMADYIKRKENG 142
E + ++ A Y K ++G
Sbjct: 600 EAKNKYTIDFAAYSKTIKDG 619
>gi|392558113|gb|EIW51341.1| hypothetical protein TRAVEDRAFT_80819, partial [Trametes versicolor
FP-101664 SS1]
Length = 91
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D K PK+ +A+ +F +D+R+ + +NPD IGK G KWK + +EK Y D
Sbjct: 17 KKDPKAPKRALSAYMFFSQDWRERIKAENPDA-GFGEIGKLLGAKWKELDDDEKKPYLDQ 75
Query: 121 AT 122
A
Sbjct: 76 AA 77
>gi|380476672|emb|CCF44585.1| non-histone chromosomal protein 6 [Colletotrichum higginsianum]
Length = 96
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
K+ + + K+ KK K D PK+ +A+ +F + R+ +E+NP I S +GK G
Sbjct: 3 KAATKRGAAGKVDKKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKILG 61
Query: 104 EKWKTMTYEEKVKY 117
E+WK + +++ Y
Sbjct: 62 ERWKALNEKQRQPY 75
>gi|444721179|gb|ELW61931.1| High mobility group protein B1 [Tupaia chinensis]
Length = 212
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 34 VAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK 93
V G E+E K+ + TK K K D PK+PP+AFF F ++R + ++P +
Sbjct: 66 VDKAGYEREMKTYIPPKGETKKKFK----DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL- 120
Query: 94 SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
SM I K GE W + K Y A + + ++++ +A Y
Sbjct: 121 SMGDIAKKLGELWNNTAADGKQPYEKKAAKLKEKYEKNIAAY 162
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+ KTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREEPKKKHPDASVNFSEFSKTCSERGKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYIKRK 139
+A ++R M YI K
Sbjct: 66 VDKAGYEREMKTYIPPK 82
>gi|336465411|gb|EGO53651.1| hypothetical protein NEUTE1DRAFT_106544 [Neurospora tetrasperma
FGSC 2508]
gi|350295304|gb|EGZ76281.1| hypothetical protein NEUTE2DRAFT_122932 [Neurospora tetrasperma
FGSC 2509]
Length = 592
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
VT + ++H K D P++PP+A+ F R+ + +N S I K GE W+ +T
Sbjct: 108 VTKRKYRRHPKADENAPERPPSAYVLFSNKMREDLKGRN---LSFTEIAKLVGENWQNLT 164
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGK 143
EK Y A + ++ +A+Y K + K
Sbjct: 165 PAEKEPYESKAQAYKEKYHAELAEYKKTPQYQK 197
>gi|388854657|emb|CCF51814.1| probable NHP6B-nonhistone chromosomal protein [Ustilago hordei]
Length = 99
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 45 SISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGE 104
S S ++ TTK KK D PK+P +A+ +F +D R+ + NP+ +G+ G
Sbjct: 11 STSTQKRTTKSKK-----DPAAPKRPLSAYMFFSQDQRERVKADNPEA-GFGDVGRLLGA 64
Query: 105 KWKTMTYEEKVKYYDIA 121
+WK M+ EK Y D+A
Sbjct: 65 RWKEMSDAEKKPYNDMA 81
>gi|392883682|gb|AFM90673.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|307191141|gb|EFN74839.1| High mobility group protein DSP1 [Camponotus floridanus]
Length = 305
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+KH K D PK+ +AFF+F D R + NP+ + I K G+KW E K
Sbjct: 194 KRKHIK-DHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWSDADPETKS 251
Query: 116 KYYDIATEKRAEFDRAMADYIKRKEN 141
KY +A + +A ++R M Y K+ +N
Sbjct: 252 KYEAMAEKDKARYEREMTAYKKKIQN 277
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSM-RAIGKACGEKWKTMTYEEKVKYYDIA 121
DSK P+ TA+ +F++ R+ ++++P+ K + R K C +WKTM+ EK +++++A
Sbjct: 109 DSK-PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHEMA 167
Query: 122 TEKRAEFDRAMADYI 136
+ + +D M +Y
Sbjct: 168 EKDKKRYDAEMQNYT 182
>gi|296479353|tpg|DAA21468.1| TPA: high-mobility group box 1-like [Bos taurus]
Length = 215
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ +++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHTKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKVDKARYEREMKTYI 79
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAVDDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|444518100|gb|ELV11958.1| High mobility group protein B1 [Tupaia chinensis]
Length = 162
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPD-IKSMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + + C E+WKTM+ EEK K D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHRKKHPDALVDFSEFSQKCSERWKTMSAEEKGKLED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKVDKARYEREMRTYI 79
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 66 MPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEK 114
+PK+PP+AFF F ++R + ++PD+ S+ + K GE W ++K
Sbjct: 94 VPKRPPSAFFLFCSEYRPKIKGEHPDL-SIGDVEKKLGEVWNNAAADDK 141
>gi|148697258|gb|EDL29205.1| mCG50622 [Mus musculus]
Length = 102
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI-KRKENGKVENSEEDSEF 153
+A +A ++R M Y +R + +V+ + E+
Sbjct: 63 MAKADKAGYEREMKTYTPQRGDQKEVQGPQYTQEY 97
>gi|346975183|gb|EGY18635.1| hypothetical protein VDAG_09161 [Verticillium dahliae VdLs.17]
Length = 518
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
VT + ++H K D P +PP+A+ F R + +N + I K GEKW++++
Sbjct: 100 VTKRKYRRHPKADDNAPGRPPSAYVLFSNKMRDDLKGRN---LTFTKIAKLVGEKWQSLS 156
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKE 140
+ EK A + ++++ +A+Y K E
Sbjct: 157 HIEKEPVETQALNAKEKYNQDLAEYKKTNE 186
>gi|453083241|gb|EMF11287.1| HMG_box-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 109
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 47 SAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
+K+ K K D MPK+ +A+ +F D R +E NP IK +GK GE+W
Sbjct: 10 GSKKAAGKADGGKRKKDPNMPKRGLSAYMFFANDTRDKVREDNPGIK-FGEVGKLLGERW 68
Query: 107 KTMTYEEKVKY 117
K + ++K Y
Sbjct: 69 KALNEKQKAPY 79
>gi|366988547|ref|XP_003674040.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
gi|342299903|emb|CCC67659.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
Length = 101
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 48 AKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWK 107
AKR T + KK D PK+ +A+ +F + R + +NP+I + +GK GEKWK
Sbjct: 6 AKRRTQRRKK-----DPNAPKRGLSAYMFFANENRDIVKAENPNI-TFGQVGKVLGEKWK 59
Query: 108 TMTYEEKVKY 117
+T EEK Y
Sbjct: 60 ALTAEEKEPY 69
>gi|392876906|gb|AFM87285.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCFDHRLRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|307105669|gb|EFN53917.1| hypothetical protein CHLNCDRAFT_136125 [Chlorella variabilis]
Length = 101
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +A+ YF D R ++ +P + S+ +GKA G WK ++ +EK Y A
Sbjct: 27 DPNAPKRPLSAYMYFASDKRVEMKKSDPSL-SLGEVGKATGAAWKELSDKEKEPYQKKAD 85
Query: 123 EKRAEFDRAMADYIKR 138
+ +A +++ A Y K+
Sbjct: 86 KDKARYEKEKAAYEKK 101
>gi|392587353|gb|EIW76687.1| high mobility group box, partial [Coniophora puteana RWD-64-598
SS2]
Length = 67
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEK-- 124
PK+P +A+ +F +D+R+ + +NPD +GK G KWK + EEK Y ++A +
Sbjct: 1 PKRPLSAYMFFSQDWRERIKTENPDA-GFGEVGKLLGAKWKELDEEEKKPYVEMAAKDKV 59
Query: 125 RAEFDRA 131
RAE ++A
Sbjct: 60 RAEEEKA 66
>gi|149236976|ref|XP_001524365.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451900|gb|EDK46156.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 93
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+ +F + R + +NP I + +GK GEKWK + E+KV Y + A
Sbjct: 16 DPDAPKRSLSAYMFFANENRDIVRAENPGI-TFGQVGKLLGEKWKALGSEDKVPYENKAE 74
Query: 123 EKRAEFDRAMADYIKR 138
+ +++ A+Y K+
Sbjct: 75 ADKKRYEKEKAEYAKK 90
>gi|121705796|ref|XP_001271161.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
gi|119399307|gb|EAW09735.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
Length = 104
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 50 RVTTKLKKKH---EKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
+ +T+ K K +K D PK+ +A+ +F D R +E+NP I S +GK GE+W
Sbjct: 5 KTSTRTKTKRVERKKKDPNAPKRGLSAYMFFANDNRDKVREENPGI-SFGQVGKMLGERW 63
Query: 107 KTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDS 151
K ++ E+ Y + A + ++ A Y N E EE+S
Sbjct: 64 KALSDSERRPYEEKAATDKKRYEDEKASY-----NAAQEEDEEES 103
>gi|85000895|ref|XP_955166.1| high-mobility-group (HMG) protein [Theileria annulata strain
Ankara]
gi|65303312|emb|CAI75690.1| high-mobility-group (HMG) protein, putative [Theileria annulata]
Length = 94
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDI-KSMRAIGKACGEKWKTMTYEEK 114
K K K D PK+ +++ +F ++ R NPD+ + + A+GK G W ++ EK
Sbjct: 12 KSKRAKKDPNAPKRALSSYMFFAKEKRAELVRDNPDLARDVAAVGKLVGAAWNSLDESEK 71
Query: 115 VKYYDIATEKRAEFDRAMADYIK 137
Y +A RA +++ A Y K
Sbjct: 72 APYEKLAEADRARYEKEKAAYNK 94
>gi|410955200|ref|XP_003984245.1| PREDICTED: high mobility group protein B2-like [Felis catus]
Length = 329
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD A K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPSKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSEKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M + +
Sbjct: 63 MAKSDKARYDREMKNCV 79
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+AFF F + R + ++P + + I K GE W + ++K Y A + +
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-PIGDIAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 127 EFDRAMADY 135
++ + +A Y
Sbjct: 154 KYGKDIAAY 162
>gi|432895009|ref|XP_004076041.1| PREDICTED: uncharacterized protein LOC101174687 [Oryzias latipes]
Length = 402
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKS-MRAIGKACGEKWKTMTYEEKVKYYDIA-TEKR 125
KKPP AF FL++ R P++KS A+ K GEKW ++ E+K KY++ A EKR
Sbjct: 330 KKPPNAFMLFLKEQRATVP---PELKSNSSAVNKLLGEKWSLLSEEQKAKYFNQAEVEKR 386
>gi|429855216|gb|ELA30184.1| hmg box protein [Colletotrichum gloeosporioides Nara gc5]
Length = 468
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
++H K D P++PP+A+ F R + +N + I K GE W+ +T EK
Sbjct: 106 RRHPKPDENAPERPPSAYVLFSNKMRDELKGRN---LTFTEIAKLVGEHWQNLTPAEKEP 162
Query: 117 YYDIATEKRAEFDRAMADYIKRKE 140
Y A + + +++ +A+Y K E
Sbjct: 163 YETSALKAKEKYNHDLAEYKKTPE 186
>gi|148680486|gb|EDL12433.1| mCG1219 [Mus musculus]
Length = 215
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ ++ +F++ R+ ++++PD + K C E+WKTM +EK K+ D
Sbjct: 3 KGDPKKPRGKMYSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMYAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
IA +A ++R M YI
Sbjct: 63 IAKADKARYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|384491850|gb|EIE83046.1| hypothetical protein RO3G_07751 [Rhizopus delemar RA 99-880]
Length = 101
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 41 KEGKSISAKRVT-----TKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSM 95
KE ++AKR TK K + K D PK+ +A+ +F +D R +E+NP S
Sbjct: 3 KETTKVTAKRAAKDDNDTK-KARRSKKDPSAPKRGLSAYMFFSQDQRPTVKEENPKA-SF 60
Query: 96 RAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
IGK GE+WK ++ EEK Y K+AE D+
Sbjct: 61 GEIGKILGERWKALSEEEKKPYL-----KKAEDDK 90
>gi|355766483|gb|EHH62519.1| hypothetical protein EGM_20887 [Macaca fascicularis]
Length = 198
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
DS PK+PP+ FF F F + NP I S+ + K GE WK + EK Y A
Sbjct: 76 DSNAPKRPPSGFFLFSSKFCPKMKSTNPGI-SIGDMVKKLGEMWKNLNDSEKQPYITKAA 134
Query: 123 EKRAEFDRAMAD 134
+ + ++++ +AD
Sbjct: 135 KLKDKYEKDVAD 146
>gi|308805086|ref|XP_003079855.1| COG0550: Topoisomerase IA (ISS) [Ostreococcus tauri]
gi|116058312|emb|CAL53501.1| COG0550: Topoisomerase IA (ISS) [Ostreococcus tauri]
Length = 1006
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
KKP TAFF F D R + +NP K + I KA GE+W T+ E K KY
Sbjct: 934 KKPLTAFFMFSADERANVKAENPTFK-IGDIAKALGERWATLDPERKAKY 982
>gi|449706835|gb|EMD46595.1| high mobility group (HMG) box domain containing protein, partial
[Entamoeba histolytica KU27]
Length = 76
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEK 114
PK+PPT +F +L + R +E++PDI+ I K E+WK + EEK
Sbjct: 29 PKRPPTPYFIYLNEHRASIKEEHPDIR-FTEISKVASEQWKALGEEEK 75
>gi|334261581|gb|AEG74031.1| HMGbox protein [Pellia endiviifolia (species B)]
gi|334261589|gb|AEG74035.1| HMGbox protein [Pellia endiviifolia (species B)]
Length = 120
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + PK+ + YF +D RK QEQNP + S IG+ G +W + +EK KY A
Sbjct: 45 DKRRPKRALGPYMYFCKDQRKEIQEQNPTM-SFGDIGRVLGSQWGKLNEKEKQKYIRKAQ 103
Query: 123 EKRAEFDRAMADY 135
+ + + M Y
Sbjct: 104 TDKRRYVKEMKRY 116
>gi|295669224|ref|XP_002795160.1| HMG-box transcription factor [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285094|gb|EEH40660.1| HMG-box transcription factor [Paracoccidioides sp. 'lutzii' Pb01]
Length = 711
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K+P+ P AF F + F+ Q+P + + I K GEKW++++ E K + D+A
Sbjct: 131 DPKIPR-PRNAFILFRQHFQSSVVAQHPGLANPE-ISKIIGEKWRSLSAESKQDWKDLAE 188
Query: 123 EKRAEFDRAMADY 135
E++A + DY
Sbjct: 189 EEKARHQQQYPDY 201
>gi|444510285|gb|ELV09567.1| High mobility group protein B3 [Tupaia chinensis]
Length = 197
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 2 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 61
Query: 131 AMADY 135
M DY
Sbjct: 62 EMKDY 66
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+PP+ FF F +FR + NP I S+ + K GE W ++ EK Y
Sbjct: 77 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPY 130
>gi|354476918|ref|XP_003500670.1| PREDICTED: high mobility group protein B4-like [Cricetulus griseus]
Length = 180
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +F+ ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 9 PKVNVSSYIHFMLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 69 ARYQEEMMNYM 79
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D P++PP++F F D + NP+ S+ + KA G+ W + +K Y A
Sbjct: 89 DPHAPRQPPSSFLLFSLDHYAQLKHDNPNW-SVVQVAKATGKMWSMTSNVDKQPYEQKAA 147
Query: 123 EKRAEFDRAMADYIKR 138
RA++ + +Y K+
Sbjct: 148 LLRAKYFEDVENYRKQ 163
>gi|327296079|ref|XP_003232734.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
gi|326465045|gb|EGD90498.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
Length = 102
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+ +A+ F + R +E+NP+I + +GK GE+WK ++ +++V Y +
Sbjct: 19 KKDPNAPKRGLSAYMIFANEQRAAVREENPNI-TFGQVGKVLGERWKALSDKQRVPYEEK 77
Query: 121 ATEKRAEFDRAMADYIKRKEN 141
A + ++ A Y R+++
Sbjct: 78 AATDKQRYEDEKAAYNSRQDD 98
>gi|261194046|ref|XP_002623428.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588442|gb|EEQ71085.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|327354542|gb|EGE83399.1| nonhistone chromosomal protein 6A [Ajellomyces dermatitidis ATCC
18188]
Length = 101
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 53 TKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYE 112
TK++ + +K D PK+ +A+ +F + R +E+NP I S +GK GE+WK + +
Sbjct: 10 TKVRGEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGI-SFGQVGKVLGERWKALNEK 68
Query: 113 EKVKY 117
++ Y
Sbjct: 69 QRAPY 73
>gi|320169908|gb|EFW46807.1| hypothetical protein CAOG_04765 [Capsaspora owczarzaki ATCC 30864]
Length = 686
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 52 TTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTY 111
K ++K E+L + P +P TAF F E R +EQNP++ + I + GE+WK +T
Sbjct: 319 VAKNRQKSERLPGE-PHRPATAFIKFSEKHRAAVREQNPNV-PYKDIARLLGERWKNLTE 376
Query: 112 EEKVKY 117
+++ K+
Sbjct: 377 DQREKF 382
>gi|290986470|ref|XP_002675947.1| predicted protein [Naegleria gruberi]
gi|284089546|gb|EFC43203.1| predicted protein [Naegleria gruberi]
Length = 215
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +++ F + +RK +NP +K + + K GEKW M EK Y + A
Sbjct: 116 DENAPKRPLSSYMLFSQTYRKSLVAENPTLK-VTEVAKLVGEKWGKMNDAEKAPYVNKAA 174
Query: 123 EKRAEFD 129
E +A ++
Sbjct: 175 ELKAAYN 181
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQ--NPDIKSMRAIGKACGEKWKTMTYEE 113
KK +K D PK+P T FF F ++ R+ + + KS + K GE+W +T E
Sbjct: 4 KKSSKKKDPNAPKRPKTGFFLFCDERREKVKATLGEGEKKSASEVSKLLGEEWGKLTDSE 63
Query: 114 KVKYYDIATEKRAEFDRAMADYIKRK 139
K KY ++ + + + +Y K K
Sbjct: 64 KDKYNSVSKKNMEVYKKQFEEYKKNK 89
>gi|444518919|gb|ELV12461.1| High mobility group protein B3 [Tupaia chinensis]
Length = 185
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+PP+ FF F +F + NP I S+ + K GE W + EK Y
Sbjct: 87 KRDPNAPKRPPSGFFLFCSEFCPKIRSNNPGI-SIGDVAKKLGEMWNNKSDSEKQPYNTK 145
Query: 121 ATEKRAEFDRAMADY 135
AT + ++++ +ADY
Sbjct: 146 AT--KLKYEKDVADY 158
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYTFFVQTCREKHKKKNPEVPVKFAEFSKKGSERWKTMSGKEKSKFDEMAKVNKVHYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|229367676|gb|ACQ58818.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F DFR + ++P + ++ K GE W + + E K Y A
Sbjct: 90 DPNAPKRPPSAFFLFCGDFRPKVKSEHPGL-TIGDTAKKLGEMWNSSSAENKQPYERKAA 148
Query: 123 EKRAEFDRAMADY 135
+ + ++D+ + Y
Sbjct: 149 KLKEKYDKDIVAY 161
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + PK +++ YF++ R+ ++++P+ + K C E+WKTM+ + K K+ D+A
Sbjct: 4 DPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKGKGKFEDMA 63
Query: 122 TEKRAEFDRAMADY 135
+ ++R M +Y
Sbjct: 64 KLDKVRYERDMKNY 77
>gi|229365968|gb|ACQ57964.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F DFR + ++P + ++ K GE W + + E K Y A
Sbjct: 90 DPNAPKRPPSAFFLFCGDFRPKVKSEHPGL-TIGDTAKKLGEMWNSSSAENKQPYERKAA 148
Query: 123 EKRAEFDRAMADY 135
+ + ++D+ + Y
Sbjct: 149 KLKEKYDKDIVAY 161
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + PK +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADY 135
+ ++R M +Y
Sbjct: 64 KLDKVRYERDMKNY 77
>gi|348541671|ref|XP_003458310.1| PREDICTED: high mobility group-T protein-like [Oreochromis
niloticus]
Length = 206
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIA 121
D P+ +++ YF++ R+ ++++P+ A K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSAKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ +A ++R M +Y+
Sbjct: 64 RQDKARYEREMMNYV 78
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F +FR + ++P + S+ + K GE W + E+K Y A
Sbjct: 91 DPNAPKRPPSAFFIFCSEFRPKVKGESPGL-SIGDVAKRLGEMWNSTAAEDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADYIKRKENG 142
+ + ++++ +A Y + + G
Sbjct: 150 KLKEKYEKDIAAYRAKGKPG 169
>gi|309265997|ref|XP_003086707.1| PREDICTED: uncharacterized protein LOC667284 [Mus musculus]
Length = 433
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D K P+ +++ +F++ RK ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 3 DPKKPRGKMSSYAFFMQTCRKEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 62
Query: 122 TEKRAEFDRAMADYI 136
+A + R + YI
Sbjct: 63 KADKARYKRKIKTYI 77
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + + ++PD+ S+ + K GE W ++K Y A
Sbjct: 90 DPNAPKRPPSAFFLFYSVYYPKIKGEHPDL-SIGDVAKKLGEMWNNAAADDKQPYEKKAA 148
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 149 KLKEKYEKDIAAY 161
>gi|149691739|ref|XP_001488130.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 212
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGRMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYI 136
+A ++R M YI
Sbjct: 66 ADKARYEREMKTYI 79
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
E+E K+ + TK K K D PK+PP+AFF F ++R + ++P + S+ +
Sbjct: 72 EREMKTYIPPKGETKKKFK----DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVA 126
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
K GE W ++K Y A + + ++++ +A Y
Sbjct: 127 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY 162
>gi|225706046|gb|ACO08869.1| High mobility group-T protein [Osmerus mordax]
Length = 204
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+PP+AFF F DFR + + P + ++ + K GE W
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPPSAFFIFCADFRAKVKGETPGL-TIGDVAKKLGEMWNGTC 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKV 144
E+K Y A + + ++++ +A Y + GKV
Sbjct: 137 AEDKQPYEKKAAKLKEKYEKDIAAY---RAKGKV 167
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D P+ +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLA 63
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M +YI
Sbjct: 64 KLDKVRYEREMKNYI 78
>gi|302309760|ref|XP_002999554.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049084|emb|CAR57991.1| unnamed protein product [Candida glabrata]
Length = 93
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 47 SAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
+ +R TT+ KK D PK+ +A+ +F + R + +NPD+ + IG+ GE+W
Sbjct: 6 APRRKTTRRKK-----DPNAPKRALSAYMFFANENRDIVRSENPDV-TFGQIGRLLGERW 59
Query: 107 KTMTYEEKVKY 117
K +T E+K Y
Sbjct: 60 KALTAEDKQPY 70
>gi|444510699|gb|ELV09703.1| High mobility group protein B2 [Tupaia chinensis]
Length = 233
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ + ++++PD + K C EKWK M+ +EK K+ D
Sbjct: 3 KGDHNKPRGKMSSYAFFVQTCGEEHKKKHPDSSVNFAEFSKKCSEKWKAMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKSDKARYDREMKNYV 79
>gi|351706443|gb|EHB09362.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 226
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+ FF F +FR + P I ++ + K GE W ++ EK Y
Sbjct: 108 DPNAPKRPPSGFFLFCSEFRPKIKSTKPGI-TIGDVAKKLGEMWNNLSDSEKQPYITKVA 166
Query: 123 EKRAEFDRAMADY 135
+ + + ++ +ADY
Sbjct: 167 KLKEKHEKDVADY 179
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ ++ +++NP + A K C E+WKTM+ +EK K+ ++A + D+
Sbjct: 33 SAYAFFVQTCKEEHKKKNPKVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKVDKVCHDQ 92
Query: 131 AMAD 134
M D
Sbjct: 93 EMKD 96
>gi|392876622|gb|AFM87143.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDSSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|225682606|gb|EEH20890.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 707
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K+P+ P AF F + F+ Q+P + + I K GEKW++++ E K + D+A
Sbjct: 131 DPKIPR-PRNAFILFRQHFQASVVAQHPGLANPE-ISKIIGEKWRSLSTESKQDWKDLAE 188
Query: 123 EKRAEFDRAMADY 135
E++A + DY
Sbjct: 189 EEKARHQQQYPDY 201
>gi|119187239|ref|XP_001244226.1| hypothetical protein CIMG_03667 [Coccidioides immitis RS]
gi|303317166|ref|XP_003068585.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108266|gb|EER26440.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320038503|gb|EFW20438.1| nucleosome binding protein Nhp6a [Coccidioides posadasii str.
Silveira]
gi|392870942|gb|EAS32789.2| non-histone chromosomal protein 6 [Coccidioides immitis RS]
Length = 102
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 50 RVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTM 109
R T + + +K D PK+ +A+ +F + R+ +E+NP I S +GK GE+WK +
Sbjct: 8 RQTKGRRAEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLGERWKAL 66
Query: 110 TYEEKVKYYDIATEKRAEFDRAMADY 135
+ +++ Y + A + ++ A+Y
Sbjct: 67 SDKQRAPYEEKAAADKKRYEDEKANY 92
>gi|75765413|pdb|1WXL|A Chain A, Solution Structure Of The Hmg-Box Domain In The Ssrp1
Subunit Of Fact
Length = 73
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 64 SKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE 123
S MPK+ TAF +L D R+ + +NP IK + I K GE WK + ++K K+ D A +
Sbjct: 1 SHMPKRATTAFMLWLNDTRESIKRENPGIK-VTEIAKKGGEMWKEL--KDKSKWEDAAAK 57
Query: 124 KRAEFDRAMADY 135
+ + M +Y
Sbjct: 58 DKQRYHDEMRNY 69
>gi|118344004|ref|NP_001071827.1| FACT complex subunit SSRP1 [Ciona intestinalis]
gi|110287972|sp|Q4H2R2.1|SSRP1_CIOIN RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Structure-specific recognition protein 1
gi|70571284|dbj|BAE06715.1| transcription factor protein [Ciona intestinalis]
Length = 704
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 53 TKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYE 112
T K K +K D PK+P +A+F +L + R F+ +N I S+ + K G++WK + +
Sbjct: 540 TPGKVKRKKKDPNAPKRPQSAYFLWLNENRGRFKAENKGI-SVTELTKLAGKEWKKIDPD 598
Query: 113 EKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
EK K+ + + + +FD AM +Y K + G+ +S
Sbjct: 599 EKQKFERMYQKSKVKFDAAMKEY-KSQGGGRTSSS 632
>gi|393219482|gb|EJD04969.1| HMG-box [Fomitiporia mediterranea MF3/22]
Length = 114
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+ +A+ +F +D+R+ + +NPD +GK G KWK M EK Y +
Sbjct: 27 KKDPNAPKRALSAYMFFSQDWRERVKAENPDA-GFGEVGKLLGAKWKEMDESEKRPYIEQ 85
Query: 121 ATEKRAEFDRAMADYIKR 138
A +A + A+Y K+
Sbjct: 86 AARDKARAEEEKANYEKK 103
>gi|255936601|ref|XP_002559327.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583947|emb|CAP91971.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 108
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 58 KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
+ K D PK+ +A+ +F D R +E+NP I S +GK G+KWK ++ ++ Y
Sbjct: 19 QRRKKDPNAPKRGLSAYMFFANDNRDKVREENPGI-SFGQVGKQLGDKWKALSETDRKPY 77
Query: 118 YDIATEKRAEFDRAMADYI 136
D A + ++ A Y+
Sbjct: 78 DDKAAADKKRYEEEKAAYL 96
>gi|148684659|gb|EDL16606.1| mCG50402 [Mus musculus]
Length = 214
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D K P+ +++ +F++ RK ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 3 DPKKPRGKMSSYAFFMQTCRKEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 62
Query: 122 TEKRAEFDRAMADYI 136
+A + R + YI
Sbjct: 63 KADKARYKRKIKTYI 77
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + + ++PD+ S+ + K GE W ++K Y A
Sbjct: 90 DPNAPKRPPSAFFLFYSVYYPKIKGEHPDL-SIGDVAKKLGEMWNNAAADDKQPYEKKAA 148
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 149 KLKEKYEKDIAAY 161
>gi|444732604|gb|ELW72891.1| High mobility group protein B2 [Tupaia chinensis]
Length = 139
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ +++ PD + K C E+WKTM+ +EK+K+ D
Sbjct: 3 KGDPNKPRDKMSSYAFFVQTCREEHKKKLPDSSVNFTEFSKKCWERWKTMSAKEKLKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A R +DR M Y
Sbjct: 63 MAKSDRGLYDREMKSY 78
>gi|154340962|ref|XP_001566434.1| putative high mobility group protein homolog tdp-1 [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134063757|emb|CAM39944.1| putative high mobility group protein homolog tdp-1 [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 299
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRA 131
+ + F+ + R+ + QNPD+K+ + + G WK ++ EK +Y ++ E + +DR
Sbjct: 119 SPYIIFVNENREKLKAQNPDMKNTELLAE-MGNLWKKISEAEKSRYQKLSDEDKLRYDRE 177
Query: 132 MADYIKR 138
MA YI R
Sbjct: 178 MAAYIAR 184
>gi|384251656|gb|EIE25133.1| hypothetical protein COCSUDRAFT_40465 [Coccomyxa subellipsoidea
C-169]
Length = 253
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 68 KKPPTAFFYFLEDFRKGFQ-----EQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
K+ PTAFF F E+ R+ + + P +K S+ A+ KA GEKW+ +T EEK Y +
Sbjct: 4 KRAPTAFFIFSEEQREATRAECQAQAEPRVKVSVGAVAKAIGEKWRALTDEEKASYKEKV 63
Query: 122 TEK 124
E+
Sbjct: 64 AER 66
>gi|170056683|ref|XP_001864141.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876428|gb|EDS39811.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 372
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V K KK+ D PK+ +AFF+F + R + NP+ + I K G KW M
Sbjct: 216 VVGKGKKRKAFKDPNAPKRSLSAFFWFCHEERNKVKALNPEY-GVGDIAKELGRKWSDMD 274
Query: 111 YEEKVKYYDIATEKRAEFDRAMADY---IKRKENGKVE 145
E K +Y +A + +A ++ M +Y K ++ G+V+
Sbjct: 275 AEVKSRYEQMAEKDKARYEAEMTEYKLKCKNEQGGQVQ 312
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ TA+ +F++ R+ ++++P+ + + A + C E+WKTM +EK +++++A + +
Sbjct: 140 PRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMAEKDK 199
Query: 126 AEFDRAMADYIKRK 139
A ++ M Y+ K
Sbjct: 200 ARYELEMQSYVPPK 213
>gi|326475470|gb|EGD99479.1| nucleosome binding protein [Trichophyton tonsurans CBS 112818]
Length = 102
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+ +A+ F + R +E+NP+I + +GK GE+WK ++ +++V Y +
Sbjct: 19 KKDPNAPKRGLSAYMIFANEQRAAVREENPNI-TFGQVGKVLGERWKALSDKQRVPYEEK 77
Query: 121 ATEKRAEFDRAMADYIKRKEN 141
A + ++ A Y R+++
Sbjct: 78 AATDKQRYEDEKAAYNSRQDD 98
>gi|148701877|gb|EDL33824.1| mCG140646 [Mus musculus]
Length = 207
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++ + ++P + + + K GE W ++K Y A
Sbjct: 92 DPNAPKRPPSAFFLFCSEYHPKIKGEHPGL-CVGDVAKKLGELWNNTAGDDKQPYEKKAA 150
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 151 KLKEKYEKDIAAY 163
>gi|170784871|ref|NP_001116308.1| wu:fk52f12 [Danio rerio]
Length = 213
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + PK +A+ YF++ R+ ++++P+I S K C +WK MT +EK ++ D
Sbjct: 3 KGDPRKPKGKMSAYAYFVQTCREEHKKKSPEIPVSFSEFSKRCSGRWKAMTDKEKSRFED 62
Query: 120 IATEKRAEFDRAMADYIKRKENGK 143
+A + + +D+ M Y+ K K
Sbjct: 63 MAKQDKVRYDQEMMHYMPGKRGKK 86
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
K+ +K D PK+PP+ FF F + R + Q P + + + K GE W +T K
Sbjct: 82 KRGKKKDPNAPKRPPSGFFLFCSEHRPQIKAQYPSL-GIGDVAKKLGEMWNGLTDANKQP 140
Query: 117 YYDIATEKRAEFDRAMADYIKRKENGKV 144
+ A + + ++ + +ADY + + G V
Sbjct: 141 FLMKANKLKDKYQKDVADYKTKSKAGGV 168
>gi|440631791|gb|ELR01710.1| non-histone chromosomal protein 6 [Geomyces destructans 20631-21]
Length = 101
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 53 TKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYE 112
+K + + +K D PK+ +A+ +F ++ R +E+NP I S +GK GE+WK + +
Sbjct: 11 SKPRGEKKKKDPNAPKRGLSAYMFFAQEQRDNVREENPGI-SFGQVGKVLGERWKALNDK 69
Query: 113 EKVKYYDIATEKRAEFDRAMADY 135
++ Y A E + ++ A Y
Sbjct: 70 QRTPYETKAQEDKKRYEDEKASY 92
>gi|3342573|gb|AAC27651.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + + C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSERCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A +A ++R M YI K
Sbjct: 63 MAKADKARYEREMKTYIPPK 82
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|407035464|gb|EKE37713.1| HMG (high mobility group) box domain containing protein [Entamoeba
nuttalli P19]
Length = 369
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP A+ F + +++Q PD+K + IGK G +WK + E+K KY D
Sbjct: 103 DENKPKKPKNAYLLFSSEKYPQYKKQFPDLK-ISEIGKKIGVEWKELPEEQKKKYIDQYY 161
Query: 123 EKRAEFDRAMADY 135
+AE++ + +Y
Sbjct: 162 ASKAEYNDKLKEY 174
>gi|303311441|ref|XP_003065732.1| HMG box domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240105394|gb|EER23587.1| HMG box domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 667
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 30 RHSVVAAVGIEKEGKSISAKRVTTKLKKKHE------KLDSKMPKKPPTAFFYFLEDFRK 83
R S VA+ + +E ++ SA + K + D K+P+ P AF F + F+
Sbjct: 96 RVSTVASCHLAREERATSAGSTKSTSSKDSNVQFCLCQPDPKIPR-PRNAFILFRQHFQS 154
Query: 84 GFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
QNP + + I K GEKW+T+ E K ++ ++A E++A + DY
Sbjct: 155 AVVAQNPGLAN-PDISKIIGEKWRTLPNESKQEWKNLAEEEKARHQQQYPDY 205
>gi|392883584|gb|AFM90624.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCPERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|149726074|ref|XP_001503141.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 215
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +E+ K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEEGKFED 62
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A +A ++R M YI K
Sbjct: 63 MAKADKARYEREMKTYIPPK 82
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++ + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYHPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|167388437|ref|XP_001738566.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898168|gb|EDR25112.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 395
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PKKP A+ F + +++Q PD+K + IGK G +WK + E+K KY D
Sbjct: 102 KKDENKPKKPKNAYLLFSSEKYPQYKKQFPDLK-ISEIGKKIGVEWKELPEEQKKKYIDQ 160
Query: 121 ATEKRAEFDRAMADY 135
+AE++ + +Y
Sbjct: 161 YYASKAEYNDKLKEY 175
>gi|126327421|ref|XP_001367294.1| PREDICTED: high mobility group protein B1-like isoform 2
[Monodelphis domestica]
Length = 216
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + ++R M YI
Sbjct: 63 MAKADKVRYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|443724197|gb|ELU12309.1| hypothetical protein CAPTEDRAFT_56147, partial [Capitella teleta]
Length = 196
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 44 KSISAKRVTTKLK-----KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAI 98
K AK V K + +++ D PK+P +A+F +L FR +++ P K +
Sbjct: 71 KGFDAKAVVDKARYEEQMNRYKGRDKNRPKRPQSAYFLWLAGFRTRMKDKIPVNKELL-- 128
Query: 99 GKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
+A GE WK +T EK Y +A +R +++ AM Y
Sbjct: 129 -RAAGEHWKRLTEVEKAPYEQMAEGERRKYEEAMRQY 164
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%)
Query: 49 KRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKT 108
K TTK K+ + D PK+P +A+F+++ R +++ I + K + W+
Sbjct: 5 KGATTKGGKRKKNKDPNRPKRPTSAYFFYVAHCRAECEKRGERITRVAQWTKEISQVWRE 64
Query: 109 MTYEEKVKYYDIATEKRAEFDRAMADYIKRKEN 141
MT E++ + A +A ++ M Y R +N
Sbjct: 65 MTPEDRKGFDAKAVVDKARYEEQMNRYKGRDKN 97
>gi|395857418|ref|XP_003801091.1| PREDICTED: high mobility group protein B1-like [Otolemur garnettii]
Length = 197
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 19 NLKMVLRKRPTRHSVVAAVGIEKEGKSISAKRV-----TTKLKKKHEKLDSKMPKKPPTA 73
NL + + R T H +EKE I K V + K+ K H K D K + ++
Sbjct: 5 NLLLCWQHRTTWHH------LEKESALICIKDVIIFEASGKITK-HGKGDPKKLRGKMSS 57
Query: 74 FFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAM 132
+F++ + ++++P + K C E+WKTM+ +E+ K+ D+A +A ++R M
Sbjct: 58 CAFFVQTSWEEHKKKHPGASVTFSEFSKKCSERWKTMSGKERGKFEDMAKADKAPYEREM 117
Query: 133 ADYIKRK 139
YI RK
Sbjct: 118 KTYILRK 124
>gi|344245608|gb|EGW01712.1| High mobility group protein B1 [Cricetulus griseus]
Length = 162
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++ + + P + S+ K GE W + E+K Y A
Sbjct: 40 DPNAPKRPPSAFFLFCSEYHPKIKGERPGL-SIGDAAKKLGETWNSTAAEDKQPYETKAA 98
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +ADY
Sbjct: 99 KLKEQYEKDIADY 111
>gi|407262070|ref|XP_003945989.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 213
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
KL KM +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 8 KLRGKM-----SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAIADKARYEREMKTYI 79
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEK 114
D PK+PP+AFF F +R + ++P + S+ + K GE W ++K
Sbjct: 91 DPNAPKRPPSAFFLFCSGYRPKIKGEHPGL-SIGDVAKKRGEMWNNTAADDK 141
>gi|147903143|ref|NP_001079387.1| high mobility group box 2 [Xenopus laevis]
gi|80479234|gb|AAI08500.1| MGC52825 protein [Xenopus laevis]
Length = 211
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ YF++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + ++R M YI
Sbjct: 63 MAKGDKVRYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + R + + P + S+ K GE+W T ++K+ + A
Sbjct: 92 DPNAPKRPPSAFFLFCSEQRPQIKSETPGL-SIGDTAKKLGERWSEQTSKDKLPFEQKAA 150
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 151 KLKEKYEKDVAAY 163
>gi|148694629|gb|EDL26576.1| mCG10155, isoform CRA_c [Mus musculus]
Length = 101
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|27370889|gb|AAH41262.1| MGC52825 protein [Xenopus laevis]
Length = 212
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ YF++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + ++R M YI
Sbjct: 63 MAKGDKVRYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + R + + P + S+ K GE+W T ++K+ + A
Sbjct: 92 DPNAPKRPPSAFFLFCSEQRPQIKSETPGL-SIGDTAKKLGERWSEQTSKDKLPFEQKAA 150
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 151 KLKEKYEKDVAAY 163
>gi|349576469|dbj|GAA21640.1| K7_Nhp6bp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 99
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 49 KRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKT 108
K+ TT+ KK D PK+ +A+ +F + R + +NPD+ + +G+ GEKWK
Sbjct: 14 KKRTTRRKK-----DPNAPKRGLSAYMFFANENRDIVRSENPDV-TFGQVGRILGEKWKA 67
Query: 109 MTYEEKVKY 117
+T EEK Y
Sbjct: 68 LTAEEKQPY 76
>gi|256089447|ref|XP_002580821.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
gi|40365359|gb|AAR85353.1| high mobility group B1 protein [Schistosoma mansoni]
gi|66275796|gb|AAY44045.1| high mobility group B1 [Schistosoma mansoni]
gi|360043524|emb|CCD78937.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
Length = 176
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 58 KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
K K D PKK +AFF F D R + +NPD K + I K G++W+ + K KY
Sbjct: 87 KKRKRDPDAPKKALSAFFLFCNDERPKVKSENPDWK-VSEIAKELGKRWEHC--KNKAKY 143
Query: 118 YDIATEKRAEFDRAMADYIKRKENGKVENSEED 150
+A ++ +++AM Y K + K E+SE D
Sbjct: 144 ESLAQVEKQRYEKAMQKY-KAGKKSKTEDSESD 175
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D PK A+ FL+ R ++++P++ ++ K C E+WK ++ +EK K+ D+A
Sbjct: 4 DKGKPKGAMNAYAAFLQSMRADHKKKHPNVTLDFKSFSKECSEQWKNLSAKEKKKFKDLA 63
Query: 122 TEKRAEFDRAMADY 135
+ + + M Y
Sbjct: 64 DKDKERYRCEMEHY 77
>gi|325089927|gb|EGC43237.1| HMG box protein [Ajellomyces capsulatus H88]
Length = 659
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K+P+ P AF F + F+ QNP + + I K GEKW+T+ E K + ++A
Sbjct: 96 DPKIPR-PRNAFILFRQHFQASVVAQNPGLANPE-ISKIIGEKWRTLPLESKQDWKNLAE 153
Query: 123 EKRAEFDRAMADY 135
E++A + DY
Sbjct: 154 EEKARHQQQYPDY 166
>gi|238486744|ref|XP_002374610.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
gi|317144043|ref|XP_003189559.1| non-histone chromosomal protein 6 [Aspergillus oryzae RIB40]
gi|220699489|gb|EED55828.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
Length = 104
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 50 RVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTM 109
R T + + +K D PK+ +A+ +F D R+ +E+NP I S +GK GEKWK +
Sbjct: 8 RKTKGTRVERKKKDPNAPKRGLSAYMFFANDNREKVREENPGI-SFGQVGKMLGEKWKAL 66
Query: 110 TYEEKVKYYDIA 121
+ ++ Y D A
Sbjct: 67 SEADRRPYEDKA 78
>gi|7544638|gb|AAA73079.2| unknown [Saccharomyces cerevisiae]
Length = 183
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
PK+P +A+F +L+D R F ++NP ++ I K GEKW+ + + K KY
Sbjct: 43 PKRPTSAYFLYLQDHRSQFVKENPTLRPAE-ISKIAGEKWQNLEADMKEKY 92
>gi|344252855|gb|EGW08959.1| TRAF family member-associated NF-kappa-B activator [Cricetulus
griseus]
Length = 427
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R F+ ++P + S+ + K GE W ++K Y A
Sbjct: 304 DPNAPKRPPSAFFLFCSEYRPKFKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 362
Query: 123 EKRAEFDRAMADY 135
+ + + ++ +A Y
Sbjct: 363 KLKEKHEKDIAAY 375
>gi|240276208|gb|EER39720.1| HMG box transcription factor [Ajellomyces capsulatus H143]
Length = 659
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K+P+ P AF F + F+ QNP + + I K GEKW+T+ E K + ++A
Sbjct: 96 DPKIPR-PRNAFILFRQHFQASVVAQNPGLANPE-ISKIIGEKWRTLPLESKQDWKNLAE 153
Query: 123 EKRAEFDRAMADY 135
E++A + DY
Sbjct: 154 EEKARHQQQYPDY 166
>gi|241604781|ref|XP_002405946.1| high mobility group protein C, putative [Ixodes scapularis]
gi|215502605|gb|EEC12099.1| high mobility group protein C, putative [Ixodes scapularis]
Length = 134
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ + FL D RK QNP +K + K EKW K KY ++ E+
Sbjct: 33 PKRPPSGYILFLNDTRKTVMRQNPALKPTEVV-KTLAEKWNMADEITKKKYETLSRERME 91
Query: 127 EFDRAMADYIKR 138
F + Y R
Sbjct: 92 AFAKEKEAYTSR 103
>gi|402086642|gb|EJT81540.1| hypothetical protein GGTG_01518 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 481
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 51 VTTKLK-KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTM 109
V TK K ++H K D P++PP+A+ F R ++Q+ + I K GE W+ +
Sbjct: 103 VATKRKYRRHPKADENAPERPPSAYVLFSNKMRDDLKDQH---LTFTEIAKLVGEHWQAL 159
Query: 110 TYEEKVKYYDIATEKRAEFDRAMADY 135
EK Y A + +++ +A+Y
Sbjct: 160 APSEKEPYETQAQTAKDKYNHDLAEY 185
>gi|71416266|ref|XP_810170.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70874664|gb|EAN88319.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+F+F+ DFRK ++PD+ S+ KA G WK ++ E K Y +A
Sbjct: 201 DENAPKRSMSAYFFFVSDFRK----KHPDL-SVTETSKAAGAAWKELSDEMKKPYEAMAQ 255
Query: 123 EKRAEFDRAMA 133
+ + + R MA
Sbjct: 256 KDKERYQREMA 266
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 10/127 (7%)
Query: 33 VVAAVGIEKEGKSISAK--RVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNP 90
+++G +K+ +S SA K+ KK +K D PK + + F D R +EQNP
Sbjct: 80 AASSIGGKKKKRSASAAADERNAKVNKKEKKPDD-YPKAALSPYILFGNDHRDKVKEQNP 138
Query: 91 DIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIK------RKENGKV 144
++K+ I ++ G+ W + K KY +A + + FDR +++Y K ++ GKV
Sbjct: 139 EMKNTE-ILQSLGKMWAEASDAVKEKYKKLAEDDKKRFDRELSEYKKSGGTEYKRGGGKV 197
Query: 145 ENSEEDS 151
+ +E++
Sbjct: 198 KAKDENA 204
>gi|432104603|gb|ELK31215.1| High mobility group protein B1 [Myotis davidii]
Length = 201
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ ++ +F++ + ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKTSSCAFFVQTYWDEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYIKRKENGKVENSEED 150
+A +A + R M YI K G+ +N+ +D
Sbjct: 63 MAKADKARYKREMKTYIPPK--GETKNTFKD 91
>gi|336274626|ref|XP_003352067.1| hypothetical protein SMAC_00615 [Sordaria macrospora k-hell]
gi|380096352|emb|CCC06400.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 595
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
VT + ++H K D P++PP+A+ F R+ + +N S I K GE W+ +T
Sbjct: 104 VTKRKYRRHPKADENAPERPPSAYVLFSNKMREDLKGRN---LSFTEIAKLVGENWQNLT 160
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIK 137
EK Y A + ++ +A+Y K
Sbjct: 161 PAEKEPYESKAQAYKEKYHAELAEYKK 187
>gi|116517272|ref|NP_001070857.1| transcription factor A, mitochondrial [Danio rerio]
gi|115528122|gb|AAI24668.1| Zgc:153358 [Danio rerio]
gi|182890840|gb|AAI65544.1| Zgc:153358 protein [Danio rerio]
Length = 277
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P TA+ F++D + +QNP IKS+ + K ++WK +T E+K + + E +
Sbjct: 47 PKRPLTAYMTFVKDMQPTVSKQNPSIKSVDVMRK-IAQQWKMLTTEQKQPFQVASLEAKE 105
Query: 127 EFDRAMADY 135
++ A+ +
Sbjct: 106 QYKLALEKF 114
>gi|67470045|ref|XP_650993.1| HMG box protein [Entamoeba histolytica HM-1:IMSS]
gi|56467670|gb|EAL45607.1| HMG box protein [Entamoeba histolytica HM-1:IMSS]
gi|449703510|gb|EMD43949.1| HMG (high mobility group) box domain containing protein, putative
[Entamoeba histolytica KU27]
Length = 384
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP A+ F + +++Q PD+K + IGK G +WK + E+K KY D
Sbjct: 103 DENKPKKPKNAYLLFSSEKYPQYKKQFPDLK-ISEIGKKIGVEWKELPEEQKKKYIDQYY 161
Query: 123 EKRAEFDRAMADY 135
+AE++ + +Y
Sbjct: 162 ASKAEYNDKLKEY 174
>gi|224072172|ref|XP_002303636.1| high mobility group family [Populus trichocarpa]
gi|222841068|gb|EEE78615.1| high mobility group family [Populus trichocarpa]
Length = 480
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +AFF F + R +N KS+ + K GE+WK MT + + Y ++A + R
Sbjct: 273 PKQPLSAFFLFCNERRAALLAEN---KSVLEVAKIAGEEWKNMTEKRRGPYEEVAKKNRE 329
Query: 127 EFDRAMADY 135
++ + M Y
Sbjct: 330 KYMQEMEAY 338
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 62 LDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIA 121
+D PKKP ++F F ++ RK ++ P I + + KWK + EE+ + A
Sbjct: 393 VDPNKPKKPASSFLLFSKETRKSLMDERPGINN-STLTAMISVKWKELNEEERQIWNSKA 451
Query: 122 TEKRAEFDRAMADYIK 137
E + + + +Y K
Sbjct: 452 AEAMEAYKKELEEYSK 467
>gi|171848741|pdb|2EQZ|A Chain A, Solution Structure Of The First Hmg-Box Domain From High
Mobility Group Protein B3
Length = 86
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 21 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 80
Query: 131 AMADY 135
M DY
Sbjct: 81 EMKDY 85
>gi|355754606|gb|EHH58507.1| hypothetical protein EGM_08375 [Macaca fascicularis]
Length = 263
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 64
Query: 122 TEKRAEFDRAMADYI 136
+A ++R M YI
Sbjct: 65 KADKARYEREMKTYI 79
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPY 144
>gi|145356938|ref|XP_001422680.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582923|gb|ABP00997.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 622
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+ +F R NP + + KA GEKWKT+T EEK Y A
Sbjct: 519 DPNAPKRGLSAYMFFSAAKRAEITAANPSF-GVTDVAKALGEKWKTITDEEKSVYQQQAD 577
Query: 123 EKRAEFDRAMADYIKRKENGKVE 145
E + ++R M Y KVE
Sbjct: 578 EDKIRYEREMEAYRAGGSQPKVE 600
>gi|444729655|gb|ELW70064.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D +PK+PP AFF F ++ +E++PD+ S+ + K GE W ++K + Y+ A
Sbjct: 91 DPNVPKRPPLAFFLFCSEYHPKIKEEHPDL-SIGDVAKILGEMWNNTAADDK-QPYEKAA 148
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 149 KLKEKYEKDIAAY 161
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ +F++ ++ ++++PD + K C E+WKTM+ +EKVK+ D+A ++ ++R
Sbjct: 14 SSYAFFVQTCQEEHKKKHPDASVNFSECLKKCSERWKTMSAKEKVKFEDMAKADKSRYER 73
Query: 131 AMADYIKRK 139
M I K
Sbjct: 74 EMKTNIPPK 82
>gi|444706336|gb|ELW47678.1| Leiomodin-1 [Tupaia chinensis]
Length = 823
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ ++ ++++P+ + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCKEEHRKKHPEAPVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A +A ++R M YI K
Sbjct: 63 MAKADKARYEREMQTYIPLK 82
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
D K PK+PP+AFF F ++ + ++P + S+ + K GE W
Sbjct: 91 DPKAPKRPPSAFFLFCSEYCPKIKGEHPGL-SIGDVAKKLGEMW 133
>gi|261199878|ref|XP_002626340.1| HMG box transcriptional regulator [Ajellomyces dermatitidis
SLH14081]
gi|239594548|gb|EEQ77129.1| HMG box transcriptional regulator [Ajellomyces dermatitidis
SLH14081]
Length = 692
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K+P+ P AF F + F+ QNP + + I K GEKW+T+ E K + ++A
Sbjct: 130 DPKIPR-PRNAFILFRQHFQASVVAQNPGLAN-PDISKIIGEKWRTLPVESKQDWKNLAE 187
Query: 123 EKRAEFDRAMADY 135
E++A + DY
Sbjct: 188 EEKARHQQQYPDY 200
>gi|149635755|ref|XP_001508702.1| PREDICTED: high mobility group protein B1-like [Ornithorhynchus
anatinus]
Length = 215
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDAAVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + ++R M YI
Sbjct: 63 MAKADKVRYEREMKTYI 79
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|335308835|ref|XP_003361389.1| PREDICTED: high mobility group protein B4-like [Sus scrofa]
Length = 198
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++ F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 11 PKANVSSYIHFLLNYSNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 70
Query: 126 AEFDRAMADYI 136
A + M +Y+
Sbjct: 71 ARYQEEMRNYV 81
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+K K D + P++PP++F F +D + +NP+ S+ + KA W T T +K
Sbjct: 84 KRKRRKRDPQAPRRPPSSFLLFCQDNYAQLKRENPNW-SVAQVAKASARMWSTTTDVDKQ 142
Query: 116 KYYDIATEKRAEFDRAMADYIKR 138
Y A RA++ ++ Y K+
Sbjct: 143 PYEQRAALLRAKYHEELSVYQKQ 165
>gi|302828472|ref|XP_002945803.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
gi|300268618|gb|EFJ52798.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
Length = 199
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKK TAF YF R + NP + S +GK GEKWK++ EK +Y + A
Sbjct: 77 DPNAPKKNLTAFMYFSNAQRDKVKTDNPGV-SFGEVGKLLGEKWKSLGANEKSEYEEKAK 135
Query: 123 EKRAEFDRAMADY 135
+ + + + M Y
Sbjct: 136 KDKERYAKEMEAY 148
>gi|50513251|pdb|1J3X|A Chain A, Solution Structure Of The N-Terminal Domain Of The Hmgb2
Length = 77
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTSREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 120 IATEKRAEFDRAM 132
+A +A +DR M
Sbjct: 63 MAKSDKARYDREM 75
>gi|403213858|emb|CCK68360.1| hypothetical protein KNAG_0A07060 [Kazachstania naganishii CBS
8797]
Length = 643
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 43 GKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKAC 102
GK+I T +K ++L + PK+P +A+F F R +Q PD K + + K
Sbjct: 355 GKAIKKLSTTQSRIEKRKQLKKQGPKRPSSAYFLFSMSIRNDLLQQYPDAK-VPELSKLA 413
Query: 103 GEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+WK +T ++K +YD E R +D+
Sbjct: 414 SARWKELTDDQKKPFYD---EFRTNWDK 438
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P F F ++ R ++NP+ K++ I K GE+W+++ EK +Y D K
Sbjct: 452 PKRPSGPFIQFTQEIRPTIVKENPE-KNLIEITKLIGERWRSLDPVEKTRYTDTYKLKLK 510
Query: 127 EFDR 130
E+++
Sbjct: 511 EWEK 514
>gi|154287646|ref|XP_001544618.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408259|gb|EDN03800.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 658
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K+P+ P AF F + F+ QNP + + I K GEKW+T+ E K + ++A
Sbjct: 95 DPKIPR-PRNAFILFRQHFQASVVAQNPGLANPE-ISKIIGEKWRTLPLESKQDWKNLAE 152
Query: 123 EKRAEFDRAMADY 135
E++A + DY
Sbjct: 153 EEKARHQQQYPDY 165
>gi|82952271|ref|XP_889413.1| PREDICTED: high mobility group protein B1-like isoform 2 [Mus
musculus]
gi|407263905|ref|XP_003945567.1| PREDICTED: high mobility group protein B1-like isoform 1 [Mus
musculus]
Length = 215
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
KL KM +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 8 KLRGKM-----SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAIADKARYEREMKTYI 79
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F +R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSGYRPKIKGEHPGL-SIGDVAKKRGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|327350450|gb|EGE79307.1| HMG box transcriptional regulator [Ajellomyces dermatitidis ATCC
18188]
Length = 692
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K+P+ P AF F + F+ QNP + + I K GEKW+T+ E K + ++A
Sbjct: 130 DPKIPR-PRNAFILFRQHFQASVVAQNPGLAN-PDISKIIGEKWRTLPVESKQDWKNLAE 187
Query: 123 EKRAEFDRAMADY 135
E++A + DY
Sbjct: 188 EEKARHQQQYPDY 200
>gi|239607940|gb|EEQ84927.1| HMG box transcriptional regulator [Ajellomyces dermatitidis ER-3]
Length = 692
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K+P+ P AF F + F+ QNP + + I K GEKW+T+ E K + ++A
Sbjct: 130 DPKIPR-PRNAFILFRQHFQASVVAQNPGLAN-PDISKIIGEKWRTLPVESKQDWKNLAE 187
Query: 123 EKRAEFDRAMADY 135
E++A + DY
Sbjct: 188 EEKARHQQQYPDY 200
>gi|395520861|ref|XP_003764541.1| PREDICTED: high mobility group protein B1 [Sarcophilus harrisii]
Length = 230
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 58 KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVK 116
K K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K
Sbjct: 14 KMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGK 73
Query: 117 YYDIATEKRAEFDRAMADYI 136
+ D+A + ++R M YI
Sbjct: 74 FEDMAKADKVRYEREMKTYI 93
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 105 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 163
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 164 KLKEKYEKDIAAY 176
>gi|225559893|gb|EEH08175.1| HMG-box transcription factor [Ajellomyces capsulatus G186AR]
gi|225559943|gb|EEH08225.1| HMG-box transcription factor [Ajellomyces capsulatus G186AR]
Length = 659
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K+P+ P AF F + F+ QNP + + I K GEKW+T+ E K + ++A
Sbjct: 96 DPKIPR-PRNAFILFRQHFQASVVAQNPGLANPE-ISKIIGEKWRTLPLESKQDWKNLAE 153
Query: 123 EKRAEFDRAMADY 135
E++A + DY
Sbjct: 154 EEKARHQQQYPDY 166
>gi|403300479|ref|XP_003940964.1| PREDICTED: high mobility group protein B1-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ ++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSCAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKVDKACYEREMKTYI 79
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K G+ W +K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGKMWNNTAANDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|323332044|gb|EGA73455.1| Abf2p [Saccharomyces cerevisiae AWRI796]
Length = 139
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+F +L+D R F ++NP ++ I K GEKW+ + + K KY + +
Sbjct: 43 PKRPTSAYFLYLQDHRSQFVKENPTLRPAE-ISKIAGEKWQNLEADIKEKYISERKKLYS 101
Query: 127 EFDRAMADY 135
E+ +A ++
Sbjct: 102 EYQKAKKEF 110
>gi|426232480|ref|XP_004010250.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 67 PKKPP---TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
PKKP +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A
Sbjct: 6 PKKPRGKMSSYAFFVQTCREERKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 123 EKRAEFDRAMADYI 136
+A ++R M YI
Sbjct: 66 ADKARYEREMKTYI 79
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K G+ W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SVGDVAKKLGQMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|431918516|gb|ELK17735.1| 182 kDa tankyrase-1-binding protein [Pteropus alecto]
Length = 2600
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 43 GKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKAC 102
K +++ T++KK D PK+P +A+ +L R+ + +P I S+ + K
Sbjct: 526 AKDRKSRKKPTEVKKGK---DPNAPKRPMSAYMLWLNASREKIKLDHPGI-SITDLSKKA 581
Query: 103 GEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
GE WK M+ E+K ++ A + R E+++AM +Y
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|344237192|gb|EGV93295.1| High mobility group protein B1 [Cricetulus griseus]
Length = 203
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +A ++R
Sbjct: 2 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFEDMAKADKARYER 61
Query: 131 AMADYI 136
M YI
Sbjct: 62 EMKTYI 67
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++ + ++P + S+ + K GE W E+K Y A
Sbjct: 79 DPNAPKRPPSAFFLFCSEYCPKIKGEHPGL-SIGDVAKKLGELWNNTAAEDKQPYGKKAA 137
Query: 123 EKRAEFDRAMADY 135
+ + + ++ +A Y
Sbjct: 138 KLKEKHEKGIAAY 150
>gi|444720594|gb|ELW61376.1| High mobility group protein B3 [Tupaia chinensis]
Length = 124
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 60 EKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
+K DS PK+PP+ FF F +F + N I S+R + K GE W ++ +K Y
Sbjct: 12 KKKDSNAPKRPPSGFFLFFSEFHPKIKSSNHGI-SIRDVAKTLGEMWNNLSDSKKQSY 68
>gi|448106088|ref|XP_004200660.1| Piso0_003256 [Millerozyma farinosa CBS 7064]
gi|448109217|ref|XP_004201291.1| Piso0_003256 [Millerozyma farinosa CBS 7064]
gi|359382082|emb|CCE80919.1| Piso0_003256 [Millerozyma farinosa CBS 7064]
gi|359382847|emb|CCE80154.1| Piso0_003256 [Millerozyma farinosa CBS 7064]
Length = 301
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D +PK+P A+ F E R+ + + D + K+ E WK + E++ YY +
Sbjct: 138 DPDLPKRPTNAYLIFCEMERERIKNEIDDTSGTPDLSKSLTEAWKNLDDEKRKPYYKLYE 197
Query: 123 EKRAEFDRAMADYIKRKE 140
+ R + R M Y +RK+
Sbjct: 198 DDRDRYQREMTLYNQRKQ 215
>gi|401839076|gb|EJT42436.1| NHP6A-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 93
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+ +A+ +F + R + +NPDI + +GK GEKWK +T EEK Y
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDI-TFGQVGKKLGEKWKALTPEEKQPY 70
>gi|85110964|ref|XP_963712.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
gi|28925429|gb|EAA34476.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
Length = 597
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
VT + ++H K D P++PP+A+ F R+ + +N S I K GE W+ +T
Sbjct: 108 VTKRKYRRHPKADENAPERPPSAYVLFSNKMREDLKGRN---LSFTEIAKLVGENWQNLT 164
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKE 140
EK Y A + ++ +A+Y K +
Sbjct: 165 PAEKEPYESKAQAYKEKYHAELAEYKKTPQ 194
>gi|6435676|pdb|1CG7|A Chain A, Hmg Protein Nhp6a From Saccharomyces Cerevisiae
Length = 93
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+ +A+ +F + R + +NPDI + +GK GEKWK +T EEK Y
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDI-TFGQVGKKLGEKWKALTPEEKQPY 70
>gi|427784853|gb|JAA57878.1| Putative transcription factor [Rhipicephalus pulchellus]
Length = 211
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ F F D RK ++NP + I KA KWKT + KY +A E+
Sbjct: 55 PKRPPSGFILFAADTRKTVLKENPALTPTEVI-KAVAGKWKTADDVTRNKYAALARERFE 113
Query: 127 EFDRAMADYIKRKENGKVENSEE 149
++++ A Y + + E EE
Sbjct: 114 QYEKEKAAYTSQLTEQQREALEE 136
>gi|403222987|dbj|BAM41118.1| high-mobility-group protein [Theileria orientalis strain Shintoku]
Length = 93
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 48 AKRVTTKLKK-KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDI-KSMRAIGKACGEK 105
A RV+ KK K K D PK+ +++ +F ++ R ++NPD+ K + +GK G
Sbjct: 2 AARVSKSAKKGKRTKKDPNAPKRALSSYMFFAKEKRNELIKENPDLAKDVATVGKLVGAA 61
Query: 106 WKTMTYEEKVKYYDIATEKRAEFDRAMADYIK 137
W ++ EK Y +A R ++R +Y K
Sbjct: 62 WNSLDDSEKAPYEKLAEADRERYEREKLEYQK 93
>gi|312378819|gb|EFR25283.1| hypothetical protein AND_09522 [Anopheles darlingi]
Length = 527
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW M
Sbjct: 346 VVGRGKKRKQFKDPNAPKRSLSAFFWFCHDERNKVKALNPEY-GVGDIAKELGRKWSDMD 404
Query: 111 YEEKVKYYDIATEKRAEFDRAMADY 135
E K KY +A + + +++ M +Y
Sbjct: 405 AEIKQKYEQMAEKDKQRYEQEMTEY 429
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K+ P+ TA+ +F++ R+ ++++P+ + + A + C E+WKTM +EK ++++
Sbjct: 264 KVKDNKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHE 323
Query: 120 IATEKRAEFDRAMADYI 136
+A + + ++ M Y+
Sbjct: 324 MAEKDKQRYELEMQSYV 340
>gi|290562443|gb|ADD38618.1| Non-histone chromosomal protein 6 [Lepeophtheirus salmonis]
Length = 125
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRA 131
T++ YF+ + RK ++ NP S + K G +WK M+ ++K ++ + + +DR
Sbjct: 37 TSYLYFVCEQRKIIRKMNPSF-SFSKVSKLLGIEWKKMSEKDKHVFHVKSIHDKHRYDRE 95
Query: 132 MADYIKRKENG 142
M DY ++K NG
Sbjct: 96 MLDYTQKKVNG 106
>gi|6323717|ref|NP_013788.1| Abf2p [Saccharomyces cerevisiae S288c]
gi|398988|sp|Q02486.1|ABF2_YEAST RecName: Full=ARS-binding factor 2, mitochondrial; Flags: Precursor
gi|763019|emb|CAA88797.1| Abf2p [Saccharomyces cerevisiae]
gi|2815294|emb|CAA11146.1| cisplatin-damaged DNA recognition protein CDRP1 [Saccharomyces
cerevisiae]
gi|45269826|gb|AAS56293.1| YMR072W [Saccharomyces cerevisiae]
gi|151946230|gb|EDN64461.1| ARS-binding factor [Saccharomyces cerevisiae YJM789]
gi|190408303|gb|EDV11568.1| ARS-binding factor 2, mitochondrial precursor [Saccharomyces
cerevisiae RM11-1a]
gi|207342356|gb|EDZ70142.1| YMR072Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273496|gb|EEU08430.1| Abf2p [Saccharomyces cerevisiae JAY291]
gi|259148645|emb|CAY81890.1| Abf2p [Saccharomyces cerevisiae EC1118]
gi|285814075|tpg|DAA09970.1| TPA: Abf2p [Saccharomyces cerevisiae S288c]
gi|323303592|gb|EGA57383.1| Abf2p [Saccharomyces cerevisiae FostersB]
gi|323336275|gb|EGA77546.1| Abf2p [Saccharomyces cerevisiae Vin13]
gi|323347161|gb|EGA81436.1| Abf2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323353057|gb|EGA85357.1| Abf2p [Saccharomyces cerevisiae VL3]
gi|349580353|dbj|GAA25513.1| K7_Abf2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763798|gb|EHN05324.1| Abf2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297232|gb|EIW08332.1| Abf2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 183
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
PK+P +A+F +L+D R F ++NP ++ I K GEKW+ + + K KY
Sbjct: 43 PKRPTSAYFLYLQDHRSQFVKENPTLRPAE-ISKIAGEKWQNLEADIKEKY 92
>gi|402882719|ref|XP_003904882.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Papio anubis]
Length = 132
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
K +K D PK+P + FF F +F + NP I S+ + K GE WK + EK
Sbjct: 20 KGGKKNDPNAPKRPLSGFFLFCSEFHPKMKSTNPGI-SIGDVAKKLGEMWKNLNDSEKQP 78
Query: 117 YYDIATEKRAEFDRAMADYIKRKENGKVENSE 148
Y K ++++ +ADY K GK++ ++
Sbjct: 79 YV-TKVAKLMKYEKDVADY---KSKGKLDGAK 106
>gi|392340368|ref|XP_003754052.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392347889|ref|XP_003749961.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 215
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
KL KM +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 8 KLRGKM-----SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++ + ++P + S+ + K GE W ++K A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYHPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPCEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|40538756|ref|NP_571371.1| transcription factor 7-like 1-B [Danio rerio]
gi|82132472|sp|Q800Q5.1|T7L1B_DANRE RecName: Full=Transcription factor 7-like 1-B; AltName: Full=HMG
box transcription factor 3-B; Short=TCF-3-B
gi|29169215|gb|AAO65958.1| T-cell factor 3b [Danio rerio]
Length = 551
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 31 HSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMP--KKPPTAFFYFLEDFRKGFQEQ 88
H + + I++E + V TK ++K + K P KKP AF ++++ R +
Sbjct: 288 HPAIVSPVIKQEPNGELSPPVNTKSPGPNKKDEDKKPHIKKPLNAFMLYMKEMRAKVVAE 347
Query: 89 NPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSE 148
+K AI + G +W +++ EE+ KYY++A ++R + + R GK + +
Sbjct: 348 C-TLKENAAINQILGRRWHSLSREEQAKYYELARKERQLHSQLYPGWSARDNYGKRKKRK 406
Query: 149 EDSEFD 154
D++ D
Sbjct: 407 RDNKTD 412
>gi|148668459|gb|EDL00778.1| mCG116117 [Mus musculus]
Length = 244
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
KL KM +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 8 KLRGKM-----SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAIADKARYEREMKTYI 79
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEK 114
D PK+PP+AFF F +R + ++P + S+ + K GE W ++K
Sbjct: 91 DPNAPKRPPSAFFLFCSGYRPKIKGEHPGL-SIGDVAKKRGEMWNNTAADDK 141
>gi|395857899|ref|XP_003801318.1| PREDICTED: high mobility group protein B4 [Otolemur garnettii]
Length = 187
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PK +++ +FL ++R F+EQ P+ + + C EKW++++ EK KY +A +
Sbjct: 9 PKVNVSSYIHFLLNYRNKFKEQQPNTYVGFKDFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 126 AEFDRAMADY 135
A + M Y
Sbjct: 69 ARYQEEMMHY 78
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + P++PP++F F +D + +NP+ S+ + KA G+ W T EK Y + A
Sbjct: 89 DPQAPRRPPSSFLLFCKDHYAQLKRENPNW-SVVQVAKASGKMWSLSTNAEKQPYEERAA 147
Query: 123 EKRAEFDRAMADYIKRKENGK 143
RA++ + Y +R+ N +
Sbjct: 148 LLRAKYQEELQIY-RRQCNAR 167
>gi|109490746|ref|XP_001074778.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392351213|ref|XP_003750876.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 211
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
KL KM +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 8 KLRGKM-----SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK PP+AFF F ++R + ++P + S+ + K GE W ++K Y +A
Sbjct: 91 DPNAPKTPPSAFFLFCSEYRPKIKGEHPGL-SIGDVVKKLGEMWTNTAADDKQPYEKMAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|296202119|ref|XP_002748265.1| PREDICTED: high mobility group protein B1-like isoform 1
[Callithrix jacchus]
gi|390463329|ref|XP_003733013.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 214
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A + + M YI
Sbjct: 63 MAKADKARYKKEMKTYI 79
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEIWNNTAADDKQHYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|392878832|gb|AFM88248.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+
Sbjct: 3 KRDPRQPRGKTSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFEG 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|392876068|gb|AFM86866.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + + R M +Y
Sbjct: 63 LAKNDKVRYGREMRNY 78
>gi|407926962|gb|EKG19868.1| High mobility group HMG1/HMG2 [Macrophomina phaseolina MS6]
Length = 106
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 52 TTKLKKKHEKLDSK------MPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEK 105
TT K K K D K PK+ +A+ +F D R +E+NP IK +GK GE+
Sbjct: 6 TTSRKTKASKADGKKKKDPNAPKRGLSAYMFFANDMRDKVREENPGIK-FGEVGKILGER 64
Query: 106 WKTMTYEEKVKY 117
WK ++ +++ Y
Sbjct: 65 WKALSEKQRAPY 76
>gi|322517988|gb|ADX06860.1| high mobility group protein B1 [Sciaenops ocellatus]
Length = 206
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ YF++ R+ ++++PD A K C +WKTM+ +EK K+ D+A + +
Sbjct: 8 PRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSGRWKTMSSKEKGKFEDLARQDK 67
Query: 126 AEFDRAMADYI 136
A ++R M Y+
Sbjct: 68 ARYEREMMSYV 78
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK + D PK+PP+AFF F +FR + + P + ++ + K GE W
Sbjct: 78 VPARGGKKKKYKDPNAPKRPPSAFFIFCSEFRPKVKGEAPGL-TIGEVAKRLGEMWNGTA 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADY 135
E+K + A + + ++++ +A Y
Sbjct: 137 SEDKQPFEKKAAKLKEKYEKEVAAY 161
>gi|335892930|gb|AEH59760.1| high mobility group box 2 [Lethenteron camtschaticum]
Length = 194
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ YF++ R+ ++++P+ A K C E+WKTM+ +EK ++ ++A +A +DR
Sbjct: 14 SSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSPKEKARFEEMAKADKARYDR 73
Query: 131 AMADYIKRK 139
M +Y+ K
Sbjct: 74 EMKNYVPPK 82
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + R + +P + + I K GE W +T E K Y A
Sbjct: 89 DPNAPKRPPSAFFVFCSEHRPKVKADHPGL-GIGEIAKRLGEMWGLLTPETKSPYEKKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 148 KLKEKYEKDVAAY 160
>gi|224043266|ref|XP_002194652.1| PREDICTED: high mobility group protein B1 [Taeniopygia guttata]
Length = 215
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
EKE K+ + TK K K D PK+PP+AFF F +FR + ++P + S+ +
Sbjct: 72 EKEMKNYVPPKGETKKKFK----DPNAPKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVA 126
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
K GE W ++K Y A + + ++++ +A Y + GKV+
Sbjct: 127 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY---RAKGKVDGG 171
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + +++ M +Y+
Sbjct: 63 MAKADKLRYEKEMKNYV 79
>gi|255721761|ref|XP_002545815.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240136304|gb|EER35857.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 225
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 53 TKLKKKHEKLDSKMPKKPPTAFFYFLEDFRK--GFQEQNPDIKSMRAI--GKACGEKWKT 108
TK +KK K D PKKP T FF F D RK G + + D+ S+ AI E+W
Sbjct: 73 TKKRKKQVK-DPNAPKKPLTMFFQFSYDLRKQIGVERKRKDLPSLSAIDMNSMIKERWDN 131
Query: 109 MTYEEKVKY---YD----IATEKRAEFDRAMAD 134
+T EEK Y YD I E++ +++ ++ D
Sbjct: 132 ITAEEKAAYKKRYDDAMIIYNEEKKKYETSLVD 164
>gi|205539816|sp|P0C6E5.1|HG3BL_HUMAN RecName: Full=Putative high mobility group protein B3-like protein
Length = 187
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
K +K D PK+PP+ FF F +F + NP I + + K GE WK + EK
Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGI-PIGDVAKKLGEMWKNLNDSEKQP 140
Query: 117 YYDIATEKRAEFDRAMADY 135
Y A + + ++++ +A Y
Sbjct: 141 YITQAAKLKEKYEKDVAVY 159
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++NP + + K C E+WKTM+ +EK K+ ++A + +D+
Sbjct: 14 SAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELAKADKVHYDQ 73
Query: 131 AMADY 135
+ DY
Sbjct: 74 EIKDY 78
>gi|151942838|gb|EDN61184.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190407991|gb|EDV11256.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256268928|gb|EEU04275.1| Nhp6ap [Saccharomyces cerevisiae JAY291]
gi|259150205|emb|CAY87008.1| Nhp6ap [Saccharomyces cerevisiae EC1118]
gi|349581863|dbj|GAA27020.1| K7_Nhp6ap [Saccharomyces cerevisiae Kyokai no. 7]
Length = 93
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+ +A+ +F + R + +NPDI + +GK GEKWK +T EEK Y
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDI-TFGQVGKKLGEKWKALTPEEKQPY 70
>gi|444729656|gb|ELW70065.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D +PK+PP AFF F ++ +E++PD+ S+ + K GE W ++K + Y+ A
Sbjct: 91 DPNVPKRPPLAFFLFCSEYHPKIKEEHPDL-SIGDVAKKLGEMWNNTAADDK-QPYEKAA 148
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 149 KLKEKYEKDIAAY 161
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ +F++ ++ ++++PD + K C E+WKTM+ +EKVK+ D+A ++ ++R
Sbjct: 14 SSYAFFVQTCQEEHKKKHPDASVNFSECVKKCSERWKTMSAKEKVKFEDMAKADKSRYER 73
Query: 131 AMADYIKRK 139
M I K
Sbjct: 74 EMKTNIPPK 82
>gi|324526583|gb|ADY48692.1| High mobility group protein 1.2, partial [Ascaris suum]
Length = 248
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+K K D PK+ +AFF+F D R Q+Q+P+ K + + + G WK ++ EE++
Sbjct: 126 KRKRVKKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWK-VGQVAQELGRYWKALSDEERM 184
Query: 116 KYYDIATEKRAEFDRAMADY 135
Y A E + + M +Y
Sbjct: 185 VYERKALEDKERYAEEMRNY 204
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 68 KKPPTAFFYFL--EDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
K P FF + E+ +K + +N + I K C EKWKTM+ +EK +++++A +
Sbjct: 52 KTSPYGFFVKMCYEEHKKKYPNENVQVTE---ISKKCSEKWKTMSDDEKRRFFELAQKDA 108
Query: 126 AEFDRAMADY 135
+ +A Y
Sbjct: 109 ERYQAEVAAY 118
>gi|45935025|gb|AAS79547.1| At4g11080 [Arabidopsis thaliana]
gi|46367464|emb|CAG25858.1| hypothetical protein [Arabidopsis thaliana]
Length = 450
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
EK I + T K KKK+E +D PKKP +++F F +D RK E++P I + +
Sbjct: 349 EKTDNIIKKTKETAKNKKKNENVDPNKPKKPTSSYFLFCKDARKSVLEEHPGINN-STVT 407
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRK 139
KW + EEK Y A + + + +Y K K
Sbjct: 408 AHITLKWMELGEEEKQVYNSKAAALMEAYKKEVEEYNKTK 447
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P +A+ + + R + +N KS+ + K GE+WK ++ E+K Y +A + +
Sbjct: 250 PKQPISAYLIYANERRAALKGEN---KSVIEVAKITGEEWKNLSEEQKAPYDKMAKKNKE 306
Query: 127 EFDRAMADYIKRKENGKVENSEEDSEF 153
+ + M Y + KE + +E+ EF
Sbjct: 307 IYLQEMEGYKRTKEEEAMSQKKEEEEF 333
>gi|449670744|ref|XP_002158984.2| PREDICTED: high mobility group protein 20A-like [Hydra
magnipapillata]
Length = 312
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 52 TTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTY 111
TK K+K D PK P T + +L + R+ F+ +NPD+ + K G+KW ++
Sbjct: 38 VTKQKRKRILKDVNAPKAPLTGYVRYLNEHREKFRIENPDM-PFHEVTKILGQKWSSLDQ 96
Query: 112 EEKVKYYDIATEKRAEFDRAMADY 135
EK +Y A + + ++ +A+ Y
Sbjct: 97 SEKQQYLYEAEKDKEKYMKALQGY 120
>gi|427777853|gb|JAA54378.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 290
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ F F D RK ++NP + I KA KWKT + KY +A E+
Sbjct: 86 PKRPPSGFILFAADTRKTVLKENPALTPTEVI-KAVAGKWKTADDVTRNKYAALARERFE 144
Query: 127 EFDRAMADYIKRKENGKVENSEE 149
++++ A Y + + E EE
Sbjct: 145 QYEKEKAAYTSQLTEQQREALEE 167
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKM-----PKKPPTAFFYFLEDFRKGFQEQNPDIKS 94
E++ +++ R+ KLK +L+ K+ PK +A+ F + RK Q++ P
Sbjct: 159 EQQREALEEVRLDKKLKITKRRLNDKLKELDKPKAAQSAYVLFSNEMRKKLQDKPP---- 214
Query: 95 MRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKE 140
+ + G WK + E+K Y A E + ++R M + +R E
Sbjct: 215 -KEVMTQLGAMWKQLPEEKKQPYLHKADEDKLRYEREMKAWSQRLE 259
>gi|146181805|ref|XP_001023420.2| hypothetical protein TTHERM_00446570 [Tetrahymena thermophila]
gi|146144084|gb|EAS03175.2| hypothetical protein TTHERM_00446570 [Tetrahymena thermophila
SB210]
Length = 255
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 13/90 (14%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG-KACGEKWKTMTYEEKVKYYDIATEKR 125
PKKP +A+F F++D+++ K I K G W + +EK YY E++
Sbjct: 17 PKKPLSAYFLFIQDYKQ---------KCGSKINLKEMGNIWNETSQDEKQIYYKKQEEEK 67
Query: 126 AEFDRAMADYIKRKENGKVENSEE-DSEFD 154
A F + M +YI+++ G EN E+ D+E D
Sbjct: 68 ARFKKEMDEYIEQQ--GDEENEEQLDNELD 95
>gi|6325309|ref|NP_015377.1| Nhp6ap [Saccharomyces cerevisiae S288c]
gi|128182|sp|P11632.1|NHP6A_YEAST RecName: Full=Non-histone chromosomal protein 6A
gi|24987379|pdb|1J5N|A Chain A, Solution Structure Of The Non-Sequence-Specific Hmgb
Protein Nhp6a In Complex With Sry Dna
gi|24987655|pdb|1LWM|A Chain A, Solution Structure Of The Sequence-Non-Specific Hmgb
Protein Nhp6a
gi|4034|emb|CAA33377.1| unnamed protein product [Saccharomyces cerevisiae]
gi|171883|gb|AAA34754.1| high mobility group non-histone protein [Saccharomyces cerevisiae]
gi|805034|emb|CAA89171.1| Nhp6ap [Saccharomyces cerevisiae]
gi|1314122|emb|CAA94998.1| Nhp6ap [Saccharomyces cerevisiae]
gi|51013911|gb|AAT93249.1| YPR052C [Saccharomyces cerevisiae]
gi|285815583|tpg|DAA11475.1| TPA: Nhp6ap [Saccharomyces cerevisiae S288c]
gi|392296063|gb|EIW07166.1| Nhp6ap [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 93
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+ +A+ +F + R + +NPDI + +GK GEKWK +T EEK Y
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDI-TFGQVGKKLGEKWKALTPEEKQPY 70
>gi|428170442|gb|EKX39367.1| hypothetical protein GUITHDRAFT_114564 [Guillardia theta CCMP2712]
Length = 133
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V TK +++ +K+ PKKP T+F F R+ + NP + S +GK GE W+ M
Sbjct: 33 VPTKGRRRRKKIAQGGPKKPATSFVMFSNAHREEVKAANPGL-SFIDVGKKLGEMWREMD 91
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSE 148
+ ++ D AT + E+ A ++ ++ G +E
Sbjct: 92 PTVRKEWEDRATAAKDEYLEAKKIWLAQRAAGMAAGAE 129
>gi|392863044|gb|EJB10598.1| HMG box transcriptional regulator [Coccidioides immitis RS]
Length = 633
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D K+P+ P AF F + F+ QNP + + I K GEKW+T+ E K ++ ++A
Sbjct: 101 DPKIPR-PRNAFILFRQHFQSAVVAQNPGLAN-PDISKIIGEKWRTLPNESKQEWKNLAE 158
Query: 123 EKRAEFDRAMADY 135
E++A + DY
Sbjct: 159 EEKARHQQQYPDY 171
>gi|171696076|ref|XP_001912962.1| hypothetical protein [Podospora anserina S mat+]
gi|170948280|emb|CAP60444.1| unnamed protein product [Podospora anserina S mat+]
Length = 478
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
VT + ++H K D P++PP+A+ F R+ + +N S I K GE W+++
Sbjct: 103 VTKRKYRRHPKPDENAPERPPSAYVLFSNKMREELKGRN---LSFTEIAKLVGENWQSLN 159
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGK 143
EK Y A + ++ +A+Y K E K
Sbjct: 160 ASEKEPYESQAQAIKEKYLSDLAEYKKTPEYKK 192
>gi|442749551|gb|JAA66935.1| Putative transcription factor a mitochondrial [Ixodes ricinus]
Length = 262
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ + FL D RK QNP +K + K EKW K KY ++ E+
Sbjct: 58 PKRPPSGYILFLNDTRKTVMRQNPALKPTEVV-KTLAEKWNMADEITKKKYETLSRERME 116
Query: 127 EFDRAMADYIKR 138
F + Y R
Sbjct: 117 AFAKEKEAYTSR 128
>gi|392876202|gb|AFM86933.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQRSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|296425555|ref|XP_002842306.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638569|emb|CAZ86497.1| unnamed protein product [Tuber melanosporum]
Length = 545
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
++H K D P+KPP+A+ F R + QN S I K GEKWK + E K
Sbjct: 107 RRHPKPDEHAPEKPPSAYVMFANRVRDELKGQN---LSFTDIAKLVGEKWKVLDPENKES 163
Query: 117 YYDIATEKRAEFDRAMADYIK 137
Y A+ + +++ + +Y K
Sbjct: 164 YEHEASIAKEKYNSELLEYKK 184
>gi|301757910|ref|XP_002914802.1| PREDICTED: high mobility group protein B1-like [Ailuropoda
melanoleuca]
Length = 215
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
KL KM +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 8 KLRGKM-----SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|388582419|gb|EIM22724.1| hypothetical protein WALSEDRAFT_53977 [Wallemia sebi CBS 633.66]
Length = 137
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 50 RVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTM 109
R TK K +K D PK+ +A+ Y ++ R +++NP+I S +GK G KWK M
Sbjct: 9 RANTKKAAKPKK-DENAPKRALSAYMYMSQEHRAEVKKENPNI-SFGEVGKVLGAKWKEM 66
Query: 110 TYEEKVKYYDIAT 122
+ EEK Y + A
Sbjct: 67 SAEEKKPYEEQAA 79
>gi|440800724|gb|ELR21759.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 128
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P T + +F + R +E NPD+ I K KWK M+ EEK Y +A
Sbjct: 28 DPNAPKRPKTGYIFFSAEERVKVKEDNPDL-GFGDITKQVSAKWKDMSEEEKEPYLTLAK 86
Query: 123 EKRAEFDRAMADY 135
+ + +++ M+ Y
Sbjct: 87 KDKERYEKEMSKY 99
>gi|5815432|gb|AAD52670.1|AF178849_1 high mobility group protein HMG1 [Gallus gallus]
Length = 214
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
EKE K+ + TK K K D PK+PP+AFF F +FR + ++P + S+ +
Sbjct: 72 EKEMKNYVPPKGETKKKFK----DPNAPKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVA 126
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVE 145
K GE W ++K Y A + + ++++ +A Y + GKV+
Sbjct: 127 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY---RAKGKVD 169
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + +++ M +Y+
Sbjct: 63 MAKADKLRYEKEMKNYV 79
>gi|380083124|gb|AFD33645.1| high mobility group box 1, partial [Gallus gallus]
Length = 185
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
EKE K+ + TK K K D PK+PP+AFF F +FR + ++P + S+ +
Sbjct: 72 EKEMKNYVPPKGETKKKFK----DPNAPKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVA 126
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVE 145
K GE W ++K Y A + + ++++ +A Y + GKV+
Sbjct: 127 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY---RAKGKVD 169
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + +++ M +Y+
Sbjct: 63 MAKADKLRYEKEMKNYV 79
>gi|407850184|gb|EKG04681.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+F+F+ DFRK ++PD+ S+ KA G WK ++ E K Y +A
Sbjct: 201 DENAPKRSMSAYFFFVGDFRK----KHPDL-SVTETSKAAGAAWKELSDEMKKPYEAMAQ 255
Query: 123 EKRAEFDRAMA 133
+ + + R MA
Sbjct: 256 KDKERYQREMA 266
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 33 VVAAVGIEKEGKSISAK--RVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNP 90
+++G +K+ +S SA K+ KK +K D PK + + F D R +EQNP
Sbjct: 80 AASSIGGKKKKRSASAAADERNAKVSKKEKKPDD-YPKAALSPYILFGNDHRDKVKEQNP 138
Query: 91 DIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIK------RKENGKV 144
+K+ I ++ G+ W + K KY +A + + FDR +++Y K ++ GKV
Sbjct: 139 GVKNTE-ILQSLGKMWAEASDAVKEKYKKLAEDDKKRFDRELSEYKKSGGTEYKRGGGKV 197
Query: 145 ENSEEDS 151
+ +E++
Sbjct: 198 KAKDENA 204
>gi|45382473|ref|NP_990233.1| high mobility group protein B1 [Gallus gallus]
gi|326914268|ref|XP_003203448.1| PREDICTED: high mobility group protein B1-like [Meleagris
gallopavo]
gi|4140289|emb|CAA76978.1| high mobility group 1 protein [Gallus gallus]
gi|60098903|emb|CAH65282.1| hypothetical protein RCJMB04_15a21 [Gallus gallus]
Length = 215
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
EKE K+ + TK K K D PK+PP+AFF F +FR + ++P + S+ +
Sbjct: 72 EKEMKNYVPPKGETKKKFK----DPNAPKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVA 126
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVE 145
K GE W ++K Y A + + ++++ +A Y + GKV+
Sbjct: 127 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY---RAKGKVD 169
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + +++ M +Y+
Sbjct: 63 MAKADKLRYEKEMKNYV 79
>gi|302755040|ref|XP_002960944.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
gi|300171883|gb|EFJ38483.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
Length = 457
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D + PK+P T + + E+ R +N + IGK GE+W++M + + Y IAT
Sbjct: 246 DPEKPKRPTTGYMAYSEERRPALMNENLKVPQ---IGKILGEEWRSMDEKARAPYEKIAT 302
Query: 123 EKRAEFDRAMADYIKRKENGKV 144
+ +A + M Y K+K +V
Sbjct: 303 DAKATYLTEMEAYNKKKAQEEV 324
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPD--IKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
D + KKP +++F + D R+ + QNP+ IK + +I GE WK+++ EEK Y +I
Sbjct: 126 DPERIKKPLSSYFLWCNDQREKVRAQNPNAGIKELSSI---FGELWKSVSEEEKKPYEEI 182
Query: 121 ATEKRAEFDRAMADYIKR 138
+ + E+ + + KR
Sbjct: 183 YQKNKEEYLKQLVGKEKR 200
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
EKE +++ A++ K K K + PKK TA+ F ++RK Q + P K +
Sbjct: 349 EKEDEAMKAEKAPRKAKAKT--AEPGKPKKAATAYILFGMEYRKKLQAEMPTAK-FAELT 405
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
KW M EEK Y + A ++ ++ AM ++
Sbjct: 406 ALVASKWNEMGAEEKQPYVNQAGVEKLKYQEAMEEF 441
>gi|20138433|sp|Q9UGV6.1|HMGLX_HUMAN RecName: Full=Putative high mobility group protein 1-like 10;
Short=HMG-1L10
Length = 211
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 76 YFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMAD 134
+F + R+ ++++PD ++ K C E+WKTM+ +EK K+ D+A +A ++R M
Sbjct: 18 FFGQTCREAHKKKHPDASVNLSEFSKKCSERWKTMSAKEKGKFEDMAKADKAHYEREMKT 77
Query: 135 YI 136
YI
Sbjct: 78 YI 79
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF F +R + ++P + S+ + K GE W ++K Y A
Sbjct: 91 DPNAPKRTPSAFFLFCSAYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|313224463|emb|CBY20253.1| unnamed protein product [Oikopleura dioica]
Length = 671
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+ +A+F+F+ + R+ + NP IK + + K GE+W+ + +K KY + A + +
Sbjct: 552 PKRAMSAYFFFINEERENIKRDNPGIK-VTEVSKIAGERWREINANDKAKYEEKALKDKE 610
Query: 127 EFDRAMADYI 136
++R A++I
Sbjct: 611 RYEREKAEFI 620
>gi|281350894|gb|EFB26478.1| hypothetical protein PANDA_002732 [Ailuropoda melanoleuca]
Length = 157
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
KL KM +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 8 KLRGKM-----SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPY 144
>gi|403332939|gb|EJY65527.1| hypothetical protein OXYTRI_14318 [Oxytricha trifallax]
Length = 772
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 67/130 (51%), Gaps = 14/130 (10%)
Query: 11 ESQSSSASNLKMVLRKRPTRHSVVAAVGIEKEGKSISAKRV-----TTKLKKKHEKLDSK 65
++QSS SNL+ R ++V+ + E K + + +TK+ ++S+
Sbjct: 271 DNQSSQQSNLQ-------KRKNLVSLIPNESPLKRLKTDEMKNDPNSTKISMPIHPINSE 323
Query: 66 M-PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEK 124
PKKP +A+ YF ++FR+ + + P + ++ + KA +W ++ E+K + +A E
Sbjct: 324 NKPKKPLSAYIYFSQEFREIIRARYPTMTVIQVM-KAVSYRWGNLSKEQKYPFEQMAVED 382
Query: 125 RAEFDRAMAD 134
+ +D+ + D
Sbjct: 383 KQRYDKEIND 392
>gi|334186863|ref|NP_001190816.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|332659408|gb|AEE84808.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 450
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK P +AF + + R +E+N KS+ + K GE+WK ++ ++K Y +A + +
Sbjct: 255 PKHPVSAFLVYANERRAALREEN---KSVVEVAKITGEEWKNLSDKKKAPYEKVAKKNKE 311
Query: 127 EFDRAMADYIKRKE 140
+ +AM +Y + KE
Sbjct: 312 TYLQAMEEYKRTKE 325
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
KKK+E +D PKKP +++F F +D RK E+ P + + KWK ++ EEK
Sbjct: 362 KKKNENVDPNKPKKPASSYFLFSKDERKKLTEERPGTNNA-TVTALISLKWKELSEEEKQ 420
Query: 116 KY 117
Y
Sbjct: 421 VY 422
>gi|224058355|ref|XP_002299486.1| high mobility group family [Populus trichocarpa]
gi|222846744|gb|EEE84291.1| high mobility group family [Populus trichocarpa]
Length = 498
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK P +AFF F + R +N K++ + K GE+WK MT ++K Y +IA
Sbjct: 295 DPLKPKHPLSAFFLFSNERRAALLAEN---KNVLEVAKIAGEEWKNMTEKQKRPYEEIAK 351
Query: 123 EKRAEFDRAMADYIKRKE 140
+ + ++ + M Y + K+
Sbjct: 352 KNKEKYTQEMEAYKQNKD 369
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP ++F F ++ RK ++P I S + KWK + EEK + A
Sbjct: 420 DPNKPKKPASSFLLFSKETRKSLVHEHPGINS-STLTAMISVKWKELIQEEKQIWNCKAA 478
Query: 123 EKRAEFDRAMADYIK 137
E + + + +Y K
Sbjct: 479 EAMEAYKKELEEYHK 493
>gi|256073640|ref|XP_002573137.1| pangolin [Schistosoma mansoni]
gi|353233415|emb|CCD80770.1| putative pangolin [Schistosoma mansoni]
Length = 683
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
KKP AF F+++ R QE+ +K AI + G+KW +T EE+ KYY++A ++
Sbjct: 422 KKPLNAFMLFMKEMRSRVQEEC-TLKESAAINQVLGKKWHELTREEQTKYYELARHEK 478
>gi|15236607|ref|NP_194111.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266376|sp|Q9SUP7.1|HMGB6_ARATH RecName: Full=High mobility group B protein 6; AltName:
Full=Nucleosome/chromatin assembly factor group D 06;
Short=Nucleosome/chromatin assembly factor group D 6;
AltName: Full=WRKY transcription factor 53;
Short=AtWRKY53; Short=WRKY DNA-binding protein 53
gi|4454049|emb|CAA23046.1| 98b like protein [Arabidopsis thaliana]
gi|7269229|emb|CAB81298.1| 98b like protein [Arabidopsis thaliana]
gi|18377799|gb|AAL67049.1| putative 98b protein [Arabidopsis thaliana]
gi|20465867|gb|AAM20038.1| putative 98b protein [Arabidopsis thaliana]
gi|22022506|gb|AAM83212.1| putative 98b protein [Arabidopsis thaliana]
gi|332659407|gb|AEE84807.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 456
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK P +AF + + R +E+N KS+ + K GE+WK ++ ++K Y +A
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALREEN---KSVVEVAKITGEEWKNLSDKKKAPYEKVAK 307
Query: 123 EKRAEFDRAMADYIKRKE 140
+ + + +AM +Y + KE
Sbjct: 308 KNKETYLQAMEEYKRTKE 325
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 59 HEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
+E +D PKKP +++F F +D RK E+ P + + KWK ++ EEK Y
Sbjct: 371 NENVDPNKPKKPASSYFLFSKDERKKLTEERPGTNNA-TVTALISLKWKELSEEEKQVY 428
>gi|339046261|ref|NP_009647.2| Nhp6bp [Saccharomyces cerevisiae S288c]
gi|341942236|sp|P11633.3|NHP6B_YEAST RecName: Full=Non-histone chromosomal protein 6B
gi|4036|emb|CAA33378.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45271022|gb|AAS56892.1| YBR089C-A [Saccharomyces cerevisiae]
gi|151946484|gb|EDN64706.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190408749|gb|EDV12014.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256274037|gb|EEU08951.1| Nhp6bp [Saccharomyces cerevisiae JAY291]
gi|290878106|emb|CBK39165.1| Nhp6bp [Saccharomyces cerevisiae EC1118]
gi|333454471|tpg|DAA07210.2| TPA: Nhp6bp [Saccharomyces cerevisiae S288c]
Length = 99
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 49 KRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKT 108
K+ TT+ KK D PK+ +A+ +F + R + +NPD+ + +G+ GE+WK
Sbjct: 14 KKRTTRRKK-----DPNAPKRGLSAYMFFANENRDIVRSENPDV-TFGQVGRILGERWKA 67
Query: 109 MTYEEKVKY 117
+T EEK Y
Sbjct: 68 LTAEEKQPY 76
>gi|440298630|gb|ELP91261.1| HMG (high mobility group) box domain containing protein, partial
[Entamoeba invadens IP1]
Length = 214
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D +PKKP T + FL + R+ F+E+ P++K + I K E W+ M E+K Y D
Sbjct: 112 KQDPNLPKKPMTPYLMFLNEHREEFREKFPELK-ITEIAKKAAEIWRDMKEEDKQVYLDK 170
Query: 121 ATEKRAEFDRAMADYIKR 138
A + ++ M Y +R
Sbjct: 171 AKKATEKYLEEMKTYNER 188
>gi|358255125|dbj|GAA56840.1| protein pangolin isoform J [Clonorchis sinensis]
Length = 1685
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
KKP AF F+++ R QE+ +K AI + G+KW ++ EE+ KYY++A ++
Sbjct: 758 KKPLNAFMLFMKEMRSRVQEEC-TLKESAAINQVLGKKWHELSREEQTKYYEMARREK 814
>gi|195382097|ref|XP_002049768.1| GJ21774 [Drosophila virilis]
gi|194144565|gb|EDW60961.1| GJ21774 [Drosophila virilis]
Length = 729
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
DS PK+ TAF +L D R+ + NP IK + I K GE WK + ++K K+ +IA
Sbjct: 555 DSNKPKRATTAFMLWLNDTREQIKRDNPGIK-VTEIAKKGGEMWKEL--KDKSKWEEIAA 611
Query: 123 EKRAEFDRAMADY 135
+ R + M +Y
Sbjct: 612 KDRQRYQDEMRNY 624
>gi|171680363|ref|XP_001905127.1| hypothetical protein [Podospora anserina S mat+]
gi|170939808|emb|CAP65034.1| unnamed protein product [Podospora anserina S mat+]
Length = 98
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 54 KLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEE 113
K+K+ K D PK+ +A+ +F + R+ +E+NP + S +GK GE+WK ++ ++
Sbjct: 13 KVKRGRGKKDPNAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILGERWKALSDKQ 71
Query: 114 KVKY 117
+ Y
Sbjct: 72 RAPY 75
>gi|183212219|gb|ACC54772.1| high mobility group box 3 [Xenopus borealis]
Length = 152
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
D PK+PP+ FF F +FR + NP I ++ + K GE W + EK Y
Sbjct: 97 DPNAPKRPPSGFFLFCSEFRPNIKSTNPGI-TIGDVAKKLGEMWNNLGDSEKQPY 150
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ YF++ R+ ++++P+I + K C E+W+TM+ +EK K+ D+A + +D
Sbjct: 22 SAYAYFVQTCREEHKKKDPEIPVNFSEFSKKCSERWRTMSGKEKSKFDDLAKVDKVRYDN 81
Query: 131 AMADY 135
M D+
Sbjct: 82 EMKDF 86
>gi|156057705|ref|XP_001594776.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980]
gi|154702369|gb|EDO02108.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 554
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
++H K D P++PP+A+ F R+ + +N S I K GE W+ ++ EK
Sbjct: 107 RRHPKTDENAPERPPSAYVIFSNKMREDLKGRN---LSFTEIAKLVGENWQNLSPAEKEP 163
Query: 117 YYDIATEKRAEFDRAMADYIK 137
Y A + + ++ +A+Y K
Sbjct: 164 YEQSAYKAKERYNNELAEYKK 184
>gi|211929|gb|AAA48819.1| high-mobility group-2 protein [Gallus gallus]
Length = 207
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ YF++ + ++++PD + + C E+WKTM+ +EK K+ +
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A +DR M +Y+
Sbjct: 63 MAKGDKARYDREMKNYV 79
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + R + +P + S+ K GE W + ++K Y A
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|71662243|ref|XP_818131.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70883364|gb|EAN96280.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+F+F+ DFRK ++PD+ S+ KA G WK ++ + K Y +A
Sbjct: 201 DENAPKRSMSAYFFFVSDFRK----KHPDL-SVTETSKAAGAAWKALSDDMKKPYEAMAQ 255
Query: 123 EKRAEFDRAMA 133
+ + + R MA
Sbjct: 256 KDKERYQREMA 266
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 33 VVAAVGIEKEGKSISAK--RVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNP 90
+++G +K+ +S SA K+ KK +K D PK + + F D R +EQNP
Sbjct: 80 AASSIGGKKKKRSASAAADERNAKVNKKEKKPDD-YPKAALSPYILFGNDHRDKVKEQNP 138
Query: 91 DIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIK------RKENGKV 144
+K+ I ++ G+ W + K KY +A + + FDR +++Y K ++ GKV
Sbjct: 139 GMKNTE-ILQSLGKMWAEASDAVKEKYKKLAEDDKKRFDRELSEYKKSGGTEYKRGGGKV 197
Query: 145 ENSEEDS 151
+ +E++
Sbjct: 198 KAKDENA 204
>gi|406866133|gb|EKD19173.1| HMG box protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 525
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
++H K D P++PP+A+ F R+ + +N S I K GE W+ ++ EK
Sbjct: 109 RRHPKPDDNAPERPPSAYVIFSNKMREDLKGRN---LSFTEIAKLVGENWQNLSPSEKDP 165
Query: 117 YYDIATEKRAEFDRAMADYIK 137
Y A+ + ++ +A+Y K
Sbjct: 166 YEQQASAAKERYNNELAEYKK 186
>gi|118488333|gb|ABK95985.1| unknown [Populus trichocarpa]
Length = 232
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK P +AFF F + R +N K++ + K GE+WK MT ++K Y +IA
Sbjct: 29 DPLKPKHPLSAFFLFSNERRAALLAEN---KNVLEVAKIAGEEWKNMTEKQKRPYEEIAK 85
Query: 123 EKRAEFDRAMADYIKRKE 140
+ + ++ + M Y + K+
Sbjct: 86 KNKEKYTQEMEAYKQNKD 103
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PKKP ++F F ++ RK ++P I S + KWK + EEK + A
Sbjct: 154 DPNKPKKPASSFLLFSKETRKSLVHEHPGINS-STLTAMISVKWKELIQEEKQIWNCKAA 212
Query: 123 EKRAEFDRAMADYIK 137
E + + + +Y K
Sbjct: 213 EAMEAYKKELEEYHK 227
>gi|5281354|gb|AAD41491.1|AF136456_1 transcription factor Tcf3b [Danio rerio]
Length = 287
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 31 HSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMP--KKPPTAFFYFLEDFRKGFQEQ 88
H + + I++E + V TK ++K + K P KKP AF ++++ R +
Sbjct: 24 HPAIVSPVIKQEPNGELSPPVNTKSPGPNKKDEDKKPHIKKPLNAFMLYMKEMRAKVVAE 83
Query: 89 NPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSE 148
+K AI + G +W +++ EE+ KYY++A ++R + + R GK + +
Sbjct: 84 C-TLKENAAINQILGRRWHSLSREEQAKYYELARKERQLHSQLYPGWSARDNYGKRKKRK 142
Query: 149 EDSEFD 154
D++ D
Sbjct: 143 RDNKTD 148
>gi|392883678|gb|AFM90671.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ ++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMFSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M +Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I S+ + K GE W +T ++K Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|145233003|ref|XP_001399874.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|317026969|ref|XP_003188583.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|134056796|emb|CAK37704.1| unnamed protein product [Aspergillus niger]
gi|350634700|gb|EHA23062.1| hypothetical protein ASPNIDRAFT_206990 [Aspergillus niger ATCC
1015]
Length = 103
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+ +A+ +F D R+ +E+NP I S +GK GE+WK ++ ++ Y +
Sbjct: 19 KKDPNAPKRGLSAYMFFANDNREKVREENPGI-SFGQVGKMLGERWKALSDTDRRPYEEK 77
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENSEEDS 151
A + ++ A Y N E EE S
Sbjct: 78 AAADKKRYEDEKASY-----NAAAEEDEESS 103
>gi|347962987|ref|XP_311155.4| AGAP000005-PA [Anopheles gambiae str. PEST]
gi|333467412|gb|EAA06432.5| AGAP000005-PA [Anopheles gambiae str. PEST]
Length = 457
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
V + KK+ + D PK+ +AFF+F D R + NP+ + I K G KW M
Sbjct: 295 VVGRGKKRKQFKDPNAPKRSLSAFFWFCHDERNKVKALNPEY-GVGDIAKELGRKWSDMD 353
Query: 111 YEEKVKYYDIATEKRAEFDRAMADY 135
E K KY +A + + +++ M +Y
Sbjct: 354 AEIKQKYEQMAEKDKQRYEQEMTEY 378
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ TA+ +F++ R+ ++++P+ + + A + C E+WKTM +EK +++++A + +
Sbjct: 219 PRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMAEKDK 278
Query: 126 AEFDRAMADYIKRK 139
A ++ M Y+ K
Sbjct: 279 ARYELEMQSYVPPK 292
>gi|326434994|gb|EGD80564.1| hypothetical protein PTSG_01156 [Salpingoeca sp. ATCC 50818]
Length = 1105
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PKKP + + +L++ RK +Q P++K + KA GE W+T++ EEK KY AT ++
Sbjct: 984 PKKPVSGYLLWLKENRKDIIQQFPELKPKEVVKKA-GEIWRTLSPEEKSKYARPATSEK 1041
>gi|186701221|gb|ACC91248.1| high mobility group HMG1/2 family protein [Arabidopsis halleri]
Length = 456
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK P +AF + + R +E D KS+ + K GE+WK ++ ++K Y ++A
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALRE---DSKSVVEVAKITGEEWKNLSDKKKAPYEEVAK 307
Query: 123 EKRAEFDRAMADYIKRKE 140
+ + + +AM +Y + KE
Sbjct: 308 KNKETYLQAMEEYKRTKE 325
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 59 HEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
+E +D PKKP +++F F +D RK E+ P + + KWK + EEK Y
Sbjct: 371 NENIDPNKPKKPASSYFLFSKDERKRLIEERPGTNN-STVTALISVKWKELGEEEKQVY 428
>gi|363747237|ref|XP_003643954.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC395230
[Gallus gallus]
Length = 923
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 32 SVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMP--KKPPTAFFYFLEDFRKGFQEQN 89
++V+ + ++ + ++ V++K +K + K P KKP AF ++++ R +
Sbjct: 645 TIVSPIVKQESAQPSTSPGVSSKSPITVKKEEEKKPHIKKPLNAFMLYMKEMRAKVVAEC 704
Query: 90 PDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
+K AI + G +W +++ EE+ KYY++A ++R
Sbjct: 705 -TLKESAAINQILGRRWHSLSREEQAKYYELARKER 739
>gi|355563197|gb|EHH19759.1| hypothetical protein EGK_02478, partial [Macaca mulatta]
Length = 121
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P + FF F +F + NP I S+ + K GE WK + EK Y
Sbjct: 26 DPNAPKRPLSGFFLFCSEFHPKMKSTNPGI-SIGDVAKKLGEMWKNLNDSEKQPYV-TKV 83
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
K ++++ +ADY K GK++ +
Sbjct: 84 AKLMKYEKDVADY---KSKGKLDGA 105
>gi|226372550|gb|ACO51900.1| High mobility group protein B2 [Rana catesbeiana]
Length = 212
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ YF++ R+ ++++PD S K C E+WKTM+ + K K+ D
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVSFAEFSKKCSERWKTMSAKGKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + ++R M YI
Sbjct: 63 LAKGDKVRYEREMKTYI 79
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + R + P + S+ K GE W T ++K + A
Sbjct: 92 DPNAPKRPPSAFFLFCSENRPQIKNDTPGL-SIGDTAKKLGELWSEQTPKDKQPFEQKAA 150
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 151 KLKEKYEKDVAAY 163
>gi|432915279|ref|XP_004079157.1| PREDICTED: TOX high mobility group box family member 4-A-like
[Oryzias latipes]
Length = 611
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 52 TTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTY 111
TT KK +K D P+KP +A+ F D + + QNP+ S + K W ++
Sbjct: 236 TTTAKKGRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPN-ASFGEVSKIVASMWDSLAE 294
Query: 112 EEKVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSE 152
++K Y + E+ +A+A Y K N + S E+ E
Sbjct: 295 DQKQVYKRKTEAAKKEYLKALAAY---KANQLSQPSAEEME 332
>gi|325181279|emb|CCA15692.1| high mobility group protein putative [Albugo laibachii Nc14]
Length = 231
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 54 KLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEE 113
++ K K D PK+ +AF ++ + R +++NPD+K+ I K GE W T +
Sbjct: 110 RVPNKRAKKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNT-DISKRLGEAWSKATDVQ 168
Query: 114 KVKYYDIATEKRAEFDRAMADYIKRKENGKVENSEEDSEFDEY 156
K Y + E R+ + R M ++ K++ + E + +++ Y
Sbjct: 169 KAPYVEKEREDRSRYKREMEEWNITKDSIEREIAVAQQQYNSY 211
>gi|291231769|ref|XP_002735836.1| PREDICTED: high mobility group 20 B-like [Saccoglossus kowalevskii]
Length = 546
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 43 GKSISAKRVTTKLKK---------KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK 93
G+ I R+T +K K D+ PK P TA+ +L + R +E+NP++
Sbjct: 227 GQGIEEPRITVTKRKGGWPKGKKRKKSAKDTGSPKAPTTAYVLYLNEQRVKVKEENPEM- 285
Query: 94 SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF---------DRAMADYIKRKENGKV 144
+ + K G +W +M+ E+K KY + A + + A ++KR+ K+
Sbjct: 286 AFTEVTKLLGSQWSSMSAEDKQKYVEEAENDKKRYIDELKAYQQTEAYQAFLKRQAAKKL 345
Query: 145 -ENSEEDSE 152
+ S DSE
Sbjct: 346 NDGSSIDSE 354
>gi|156846079|ref|XP_001645928.1| hypothetical protein Kpol_1045p57 [Vanderwaltozyma polyspora DSM
70294]
gi|156116598|gb|EDO18070.1| hypothetical protein Kpol_1045p57 [Vanderwaltozyma polyspora DSM
70294]
Length = 291
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D +PK+P A+ F E ++ ++ + + KA E WK ++ E++ YY + +
Sbjct: 90 DPNLPKRPTNAYLLFCEVNKEKIRQS-----GTQDVTKALAEAWKNLSEEDRKPYYKLYS 144
Query: 123 EKRAEFDRAMADYIKRKENGK 143
+ R + R M Y EN K
Sbjct: 145 DDRERYKREMEIYTMNNENKK 165
>gi|302926833|ref|XP_003054372.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
gi|256735313|gb|EEU48659.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
Length = 101
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
KK K D PK+ +A+ +F + R+ +E+NP I S +GK GE+WK + +++
Sbjct: 14 KKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLGERWKALNEKQRAP 72
Query: 117 Y 117
Y
Sbjct: 73 Y 73
>gi|1870104|emb|CAA85042.1| NHP6B [Saccharomyces cerevisiae]
Length = 99
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 49 KRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKT 108
K+ TT+ KK D PK+ +A+ +F + R + +NPD+ + +G+ GE+WK
Sbjct: 14 KKRTTRRKK-----DPNAPKRRLSAYMFFANENRDIVRSENPDV-TFGQVGRILGERWKA 67
Query: 109 MTYEEKVKY 117
+T EEK Y
Sbjct: 68 LTAEEKQPY 76
>gi|189256|gb|AAC15850.1| non-histone chromosomal protein [Homo sapiens]
Length = 109
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ ++ NP++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKXNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
M DY
Sbjct: 74 EMKDY 78
>gi|118343822|ref|NP_001071733.1| transcription factor protein [Ciona intestinalis]
gi|70569841|dbj|BAE06487.1| transcription factor protein [Ciona intestinalis]
Length = 204
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D P+ T + YF++ R+ + ++P+ + + A + C ++WK MT +EK + D
Sbjct: 4 KKDPNKPRGRMTGYAYFVQTCREEHKRKHPNEQVVFAEFSRKCAKRWKPMTDKEKKTFTD 63
Query: 120 IATEKRAEFDRAMADYI 136
+A + R ++R M DY+
Sbjct: 64 MAEKDRQRYEREMKDYV 80
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P +AFF F D R + +NP ++ I KA G+KW + + K KY +
Sbjct: 94 DPNAPKRPQSAFFLFCADRRAPLKAENPGW-TVGEIAKALGKKWAAASPDTKKKYAEQGE 152
Query: 123 EKRAEFDRAMADYIKRKE 140
+++++++ M Y ++E
Sbjct: 153 VEKSKYNKEMEKYRSQQE 170
>gi|353351504|emb|CBX36444.1| high-mobility-group-1 protein [Plecoglossus altivelis]
Length = 204
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D P+ +++ YF++ R+ ++++P+ + K C E+WKTM+ +EK K+ D+A
Sbjct: 4 DPTKPRGKTSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLA 63
Query: 122 TEKRAEFDRAMADYI 136
+ ++R M +YI
Sbjct: 64 KLDKVRYEREMKNYI 78
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 51 VTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMT 110
+ K +KK D PK+PP+AFF F DFR + + P ++ + K GE W
Sbjct: 78 IPPKGEKKKRFKDPNAPKRPPSAFFIFCADFRAKVKGETPG-PTIGDVAKKLGEMWNGTC 136
Query: 111 YEEKVKYYDIATEKRAEFDRAMADYIKRKENGKV 144
E+K Y A + + ++++ +A Y + GKV
Sbjct: 137 AEDKQPYEKKAAKLKEKYEKDIAAY---RAKGKV 167
>gi|116206850|ref|XP_001229234.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183315|gb|EAQ90783.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 96
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
KK +K D PK+ +A+ +F + R +E+NP + S +GK GE+WK ++ +++
Sbjct: 14 KKTRQKKDPNAPKRGLSAYMFFANEQRDNVREENPGV-SFGQVGKILGERWKALSDKQRA 72
Query: 116 KY 117
Y
Sbjct: 73 PY 74
>gi|444730168|gb|ELW70558.1| High mobility group protein B3 [Tupaia chinensis]
Length = 369
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+P + FF F +FR + NP I S+ + K G+ W ++ EK Y A
Sbjct: 89 DPNAPKRPLSGFFLFSSEFRPKIKSTNPGI-SIGDVAKKLGDMWNNLSDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A+Y
Sbjct: 148 KLKEKYEKDVANY 160
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ +++N ++ A K C E+WKTM+ +EK K+ ++A + +DR
Sbjct: 14 SAYAFFVQTCREEHKKKNLEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 131 AMADY 135
DY
Sbjct: 74 ETKDY 78
>gi|260806967|ref|XP_002598355.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
gi|229283627|gb|EEN54367.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
Length = 223
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSM-RAIGKACGEKWKTMTYEEKVKYYDIA 121
D PK +A+ F+++ RK +++ PD + + K C E+WKTM EK ++ D+A
Sbjct: 5 DKNKPKGKMSAYACFVQECRKEHEKKYPDKQVVFTEFSKKCAERWKTMNDGEKKRFQDLA 64
Query: 122 TEKRAEFDRAMADYIKRK--ENGKVENSEED 150
+ ++R MA Y+ K E G+ + ++D
Sbjct: 65 ETDKRRYEREMAKYVPPKGAEGGRRKRKKKD 95
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
++K +K D PK+ +AFF + D R + +PD + + I K G +WK ++ +K
Sbjct: 88 RRKRKKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQ-VGEIAKILGRQWKEISDSDKA 146
Query: 116 KYYDIATEKRAEFDRAMADY 135
KY A ++A + + +A+Y
Sbjct: 147 KYEKKAQTEKARYQKELAEY 166
>gi|300677966|gb|ADK27290.1| high-mobility-group B1a [Gekko japonicus]
Length = 215
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEE 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + ++R M +YI
Sbjct: 63 MAKGDKVRYEREMKNYI 79
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F +FR + ++P + S+ + K GE W ++K + A
Sbjct: 91 DPNAPKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVAKKLGEMWNNTAGDDKQPFEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 150 KLKEKYEKDIAAY 162
>gi|444707034|gb|ELW48343.1| High mobility group protein B1 [Tupaia chinensis]
Length = 203
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +A ++R
Sbjct: 2 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 61
Query: 131 AMADYI 136
M YI
Sbjct: 62 EMKTYI 67
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 79 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 137
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 138 KLKEKYEKDIAAY 150
>gi|149030113|gb|EDL85190.1| rCG63106 [Rattus norvegicus]
Length = 201
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D+A +A ++R
Sbjct: 2 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 61
Query: 131 AMADYI 136
M YI
Sbjct: 62 EMKTYI 67
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F ++R + ++P + S+ + K GE W ++K Y A
Sbjct: 79 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 137
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 138 KLKEKYEKDIAAY 150
>gi|45360483|ref|NP_988904.1| high mobility group box 2 [Xenopus (Silurana) tropicalis]
gi|38181929|gb|AAH61601.1| high-mobility group box 2 [Xenopus (Silurana) tropicalis]
Length = 212
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D P+ +++ YF++ R+ ++++PD + K C E+WKTM+ +EK K+ +
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEE 62
Query: 120 IATEKRAEFDRAMADYI 136
+A + ++R M YI
Sbjct: 63 MAKNDKVRYEREMKTYI 79
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+PP+AFF F + R + ++P + S+ K GE W T ++K+ Y A
Sbjct: 92 DPNAPKRPPSAFFLFCSEHRPQIKSESPGL-SIGDTAKKLGEMWSEQTPKDKLPYEQKAA 150
Query: 123 EKRAEFDRAMADY 135
+ + ++++ +A Y
Sbjct: 151 KLKEKYEKDVAAY 163
>gi|348520102|ref|XP_003447568.1| PREDICTED: high mobility group protein 20A-like [Oreochromis
niloticus]
Length = 291
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
DS PK P T + F+ D R+ + + PD+ I + G +W + EEK +Y D A
Sbjct: 41 DSNAPKAPLTGYVRFMNDRREQLRAERPDV-PFPEITRMLGNEWSKLPPEEKQRYLDEAE 99
Query: 123 EKRAEFDRAMADYIK 137
+ + R + Y K
Sbjct: 100 RDKERYMRELEKYQK 114
>gi|195025405|ref|XP_001986052.1| GH21151 [Drosophila grimshawi]
gi|193902052|gb|EDW00919.1| GH21151 [Drosophila grimshawi]
Length = 744
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
DS PK+P TAF +L D R+ + NP IK + I K GE WK + ++K K+ + A+
Sbjct: 556 DSNKPKRPTTAFMLWLNDTREQIKRDNPGIK-VTEIAKKGGEMWKEL--KDKSKWDEAAS 612
Query: 123 EKRAEFDRAMADY 135
+ + + M +Y
Sbjct: 613 KDKQRYQDEMRNY 625
>gi|347441690|emb|CCD34611.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 101
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+ +F + R +E+NP I S +GK GE+WK + +++ Y + A
Sbjct: 20 DPNAPKRGLSAYMFFANEQRDNVREENPGI-SFGQVGKVLGERWKALNEKQRGPYEESAA 78
Query: 123 EKRAEFDRAMADY 135
+ + ++ A+Y
Sbjct: 79 KDKKRYEEEKANY 91
>gi|221221710|gb|ACM09516.1| High mobility group protein B1 [Salmo salar]
Length = 179
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D + P+ +++ YF++ R ++++P+ + K C E+WK M+ +EK K+ D+A
Sbjct: 4 DPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDMA 63
Query: 122 TEKRAEFDRAMADYI 136
+ + ++R M +YI
Sbjct: 64 KQDKVRYEREMKNYI 78
>gi|444721192|gb|ELW61941.1| High mobility group protein B1 [Tupaia chinensis]
Length = 300
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ + ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFKD 62
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A +A ++R M YI K
Sbjct: 63 MAKVNKARYEREMKTYIPPK 82
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
D PK+PP+AFF F ++R + ++P + S+ + K GE W
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMW 133
>gi|354485801|ref|XP_003505070.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
Length = 198
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++ D + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHLDFSVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKTDKARYEREMKTYI 79
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ P+AFF F ++R + + P + S+ + K GE W E++ Y A
Sbjct: 91 DPNAPKRRPSAFFLFCSEYRPRIKGERPGL-SIGDVAKKLGEMWNNTAAEDRQPYEKKAA 149
Query: 123 EKRAEFDRAMADY 135
+ + + ++ +A Y
Sbjct: 150 KLKEKHEKGIAAY 162
>gi|348514195|ref|XP_003444626.1| PREDICTED: FACT complex subunit SSRP1-like [Oreochromis niloticus]
Length = 709
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D+ PK+P +A+ +L R+ + +NP I S+ I K GE W+ ++ +EK ++ A
Sbjct: 539 DAGGPKRPMSAYMLWLNSSRERIKSENPGI-SVTEISKKAGEMWRQLSKDEKQEWEAKAG 597
Query: 123 EKRAEFDRAMADYIKRKENGKVENS 147
E + ++D+A +Y KE+G +S
Sbjct: 598 EAKKQYDKAKKEY---KESGGATSS 619
>gi|224052252|ref|XP_002187547.1| PREDICTED: transcription factor A, mitochondrial [Taeniopygia
guttata]
Length = 277
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
S+ PK+P TA+F F+ D R F+E+NP++ + I K G W+ + +K Y +
Sbjct: 54 SSQRPKRPLTAYFRFVMDNRPAFREKNPEVSNTELIKKLAGA-WRELPASQKQVYEEALK 112
Query: 123 EKRAEFDRAMADY 135
+ MA Y
Sbjct: 113 TDWKRYGEQMAAY 125
>gi|323452103|gb|EGB07978.1| hypothetical protein AURANDRAFT_17746 [Aureococcus anophagefferens]
Length = 83
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 54 KLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEE 113
K K++ EK D K PK +A+ YF + R + +N D+ + +GK G WK T +E
Sbjct: 4 KRKERREK-DPKAPKSATSAYMYFSKHHRLLLKRENSDL-TFGDLGKTVGAMWKAATPQE 61
Query: 114 KVKYYDIATEKRAEFDRAMADY 135
K + D+A R ++ +++Y
Sbjct: 62 KKPFEDLAAADRTRYNSELSEY 83
>gi|147902244|ref|NP_001090402.1| high mobility group 20B [Xenopus laevis]
gi|114108329|gb|AAI23348.1| Hmg20b protein [Xenopus laevis]
Length = 319
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
KK +K+ PK P T + FL + R+ + Q+PD+ I K G +W T+ EK +
Sbjct: 58 KKRKKILPNGPKAPVTGYVRFLNERREQIRAQHPDL-PFPEITKMLGAEWSTLPAHEKQR 116
Query: 117 YYDIATEKRAEFDRAMADY 135
Y D A + ++ + + +Y
Sbjct: 117 YLDEAERDKQQYMKELREY 135
>gi|358372276|dbj|GAA88880.1| nucleosome binding protein (Nhp6a) [Aspergillus kawachii IFO 4308]
Length = 104
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+ +A+ +F D R+ +E+NP I S +GK GE+WK ++ ++ Y +
Sbjct: 20 KKDPNAPKRGLSAYMFFANDNREKVREENPGI-SFGQVGKMLGERWKALSDTDRRPYEEK 78
Query: 121 ATEKRAEFDRAMADYIKRKENGKVENSEEDS 151
A + ++ A Y N E EE S
Sbjct: 79 AAADKKRYEDEKASY-----NAAAEEDEESS 104
>gi|242003301|ref|XP_002422686.1| High mobility group protein B2, putative [Pediculus humanus
corporis]
gi|212505508|gb|EEB09948.1| High mobility group protein B2, putative [Pediculus humanus
corporis]
Length = 187
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
TA+ +F++ R+ ++++PD + A K C E+WKTM +EK +++++A + + +D
Sbjct: 15 TAYAFFVQTCREEHKKKHPDENVVFAEFSKKCAERWKTMLDKEKRRFHEMAEKDKLRYDS 74
Query: 131 AMADYI 136
M +Y+
Sbjct: 75 EMQNYV 80
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K+KH K D PK+ +AFF+F D R + NP+ + + K G +W + K
Sbjct: 90 KRKHIK-DPNAPKRSLSAFFWFCNDERPKVKAINPEY-GVGDVAKELGRRWAEADPDTKS 147
Query: 116 KYYDIATEKRAEFDR 130
KY +A + +A +DR
Sbjct: 148 KYEAMAEKDKARYDR 162
>gi|209734090|gb|ACI67914.1| High mobility group protein B2 [Salmo salar]
Length = 136
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D PK +++ +F+ R+ ++++P + K C E+W+TM+ +EKVK+ D+A
Sbjct: 5 DPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDMA 64
Query: 122 TEKRAEFDRAMADYI 136
+ +D+ M Y+
Sbjct: 65 KGDKVRYDKNMKGYV 79
>gi|193787044|dbj|BAG51867.1| unnamed protein product [Homo sapiens]
Length = 176
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 29 TRHSVVAAVGIEKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQ 88
T S + + E+E K+ + TK K K D PK+PP+AFF F ++R + +
Sbjct: 22 TSQSFLRSARYEREMKTYIPPKGETKKKFK----DPNAPKRPPSAFFLFCSEYRPKIKGE 77
Query: 89 NPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
+P + S+ + K GE W ++K Y A + + ++++ +A Y
Sbjct: 78 HPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY 123
>gi|432860343|ref|XP_004069511.1| PREDICTED: high mobility group protein 20A-like [Oryzias latipes]
Length = 291
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
DS PK P T + F+ D R+ + + PD+ I + G +W + EEK +Y D A
Sbjct: 41 DSNAPKAPLTGYVRFMNDRREQLRAERPDV-PFPEITRMLGNEWSKLPPEEKQRYLDEAE 99
Query: 123 EKRAEFDRAMADYIK 137
+ + R + Y K
Sbjct: 100 RDKERYMRELEKYQK 114
>gi|395859165|ref|XP_003801914.1| PREDICTED: high mobility group protein B1-like [Otolemur garnettii]
Length = 220
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIA 121
D K P+ +++ +F++ R+ +++++PD S K C E+WKTM+ ++K K D+A
Sbjct: 26 DLKKPRGKMSSYAFFVQTCREEYKKKHPDASVSFSEFSKKCSERWKTMSPKKKGKCEDMA 85
Query: 122 TEKRAEFDRAMADYI 136
+A ++R M Y+
Sbjct: 86 KADKACYEREMKTYV 100
>gi|320583540|gb|EFW97753.1| hypothetical protein HPODL_0383 [Ogataea parapolymorpha DL-1]
Length = 2078
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 11 ESQSSSASNLKMVLRKRPTRHSVVAAVGIEKEGKSISAK--RVTTKLKKKHEKLDSKMPK 68
E S +++ +L K P +A G S+ AK R LKK+ K D +PK
Sbjct: 1891 EIDSLRLADITHLLTKTPFS---LAKNGFSASVGSLVAKKKRGANTLKKQRLK-DPTIPK 1946
Query: 69 KPPTAFFYFLE----DFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEK 124
+P A+ F E +K + ++P + S + KA E W+ + + YY++ +
Sbjct: 1947 RPTNAYLIFCEMEKERVKKQIESKDPGVPS--DLSKAMTEAWRNLDDVSRKPYYELYEQD 2004
Query: 125 RAEFDRAMADYIKRKENGKVENSEED 150
R + R + +Y +++NGK + ++D
Sbjct: 2005 RLRYQREIKEYNSKQKNGKAGDLKKD 2030
>gi|193664382|ref|XP_001944154.1| PREDICTED: hypothetical protein LOC100167132 [Acyrthosiphon pisum]
Length = 410
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ TA+ +F++ R+ ++++PD + A K C E+WKTM +EK +++++A + +
Sbjct: 196 PRGRMTAYAFFVQTCREEHKKKHPDENVIFAEFSKKCAERWKTMNEKEKKRFHEMADKDK 255
Query: 126 AEFDRAMADYI 136
+D M YI
Sbjct: 256 LRYDTEMQSYI 266
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 46 ISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEK 105
I K + KK+ + D PK+ +AFF+F D R + NP+ + + K G+K
Sbjct: 266 IPPKGEKVRGKKRKQIKDPNAPKRSLSAFFWFCNDERGKVKAVNPEY-GVGDVAKELGKK 324
Query: 106 WKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
W K KY +A + +A ++R M +Y
Sbjct: 325 WSDADITVKQKYEAMAEKDKARYEREMTEY 354
>gi|410908083|ref|XP_003967520.1| PREDICTED: high mobility group protein 20A-like [Takifugu rubripes]
Length = 291
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
DS PK P T + F+ D R+ + + PD+ I + G +W + EEK +Y D A
Sbjct: 41 DSNAPKAPLTGYVRFMNDRREQLRAERPDV-PFPEITRMLGNEWSKLPPEEKQRYLDEAE 99
Query: 123 EKRAEFDRAMADYIK 137
+ + R + Y K
Sbjct: 100 RDKERYMRELEKYQK 114
>gi|291228964|ref|XP_002734447.1| PREDICTED: structure specific recognition protein-like
[Saccoglossus kowalevskii]
Length = 259
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRA 131
TA+F +L + R+ ++ P S+ I K GE WK MT +K KY +A E++ +++ A
Sbjct: 80 TAYFLWLNEKRESIKKSLPG-SSVAEISKRAGELWKKMTESDKKKYTALAAEEKIKYEDA 138
Query: 132 MADYIKRKENGKV 144
M Y +++ +G +
Sbjct: 139 MKVYKRKQADGDI 151
>gi|405977513|gb|EKC41956.1| High mobility group protein B3 [Crassostrea gigas]
Length = 202
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D+ PK+P +A+F FL DFR + ++ D K I K GE W+ + EK + +A
Sbjct: 95 DAGKPKRPQSAYFCFLADFRLKMKGKDIDHKE---IIKMAGEAWRNLDDNEKKPFEKLAQ 151
Query: 123 EKRAEFDRAMADYIK 137
+++ ++++A++D+ K
Sbjct: 152 KEQEKYEQALSDWRK 166
>gi|296470699|tpg|DAA12814.1| TPA: high mobility group box 3-like [Bos taurus]
Length = 197
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 58 KHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
K K D PK+PP+ FF F +F + NP I S+ + K GE W ++ + K +
Sbjct: 81 KGGKKDPNAPKRPPSGFFLFFSEFCSEIKSTNPGI-SIGDVAKKLGEMWNNLS-DSKKQL 138
Query: 118 YDIATEKRAEFDRAMADY 135
Y K ++++ +ADY
Sbjct: 139 YVNKDAKLKKYEKDVADY 156
>gi|365982187|ref|XP_003667927.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
gi|343766693|emb|CCD22684.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
Length = 93
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDI 120
K D PK+ +A+ +F D R + +NP+I + IGK G KWK + EEK Y D
Sbjct: 15 KKDPNAPKRGLSAYMFFANDNRDIVKAENPNI-TFGQIGKVLGAKWKELNDEEKQPYQDK 73
Query: 121 A 121
A
Sbjct: 74 A 74
>gi|443899697|dbj|GAC77026.1| isocitrate dehydrogenase, alpha subunit [Pseudozyma antarctica
T-34]
Length = 308
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 48 AKRVTTKLKKKHEKL-DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKW 106
AK+++ K+K ++L D PK+PP+A+ F + R+ ++++P + + K E W
Sbjct: 210 AKKLSKLQKRKEKRLRDPDAPKRPPSAYLLFQNEVRQEIRKKHPGLPYSSVLRKV-SEAW 268
Query: 107 KTMTYEEKVKYYDIATEKRAEFDR 130
K +T E++ Y+D TE +++
Sbjct: 269 KELTDEQQKVYHDKTTENMVTWNQ 292
>gi|367018942|ref|XP_003658756.1| hypothetical protein MYCTH_2294934 [Myceliophthora thermophila ATCC
42464]
gi|347006023|gb|AEO53511.1| hypothetical protein MYCTH_2294934 [Myceliophthora thermophila ATCC
42464]
Length = 521
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 42 EGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKA 101
EG+ VT + ++H K D P++PP+A+ F R+ + +N S I K
Sbjct: 94 EGRETVGTVVTKRKYRRHPKPDENAPERPPSAYVLFSNKMREELKGRN---LSFAEIAKL 150
Query: 102 CGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADYIK 137
GE W+ ++ EK + A + ++ +A+Y K
Sbjct: 151 VGENWQNLSAAEKEPFEARAQAIKDKYLADLAEYKK 186
>gi|221219844|gb|ACM08583.1| High mobility group protein B2 [Salmo salar]
Length = 211
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
K +K D PK+PP+AFF F +FR +++ P S+ K G W T +K
Sbjct: 86 KSGRKKKDPNAPKRPPSAFFVFSAEFRPTVKQEFPGC-SIGQCAKKLGIMWGQQTPTQKQ 144
Query: 116 KYYDIATEKRAEFDRAMADY 135
+ + A R ++D+ MA Y
Sbjct: 145 PFEEKALRLREKYDKDMAAY 164
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYD 119
K D PK +A+ +F++ R+ + ++P+ A K C E+W+ T ++ ++ D
Sbjct: 3 KGDVNKPKGKTSAYAFFVQTCREEHKRKHPEQSVNFAEFSKQCSERWRASTATDRRRFED 62
Query: 120 IATEKRAEFDRAMADYIKRKENGKVENSEED 150
+A + ++R M Y+ K K ++D
Sbjct: 63 MAKNDKVRYERDMRGYVPPKGMAKSGRKKKD 93
>gi|449269673|gb|EMC80424.1| High mobility group protein B1 [Columba livia]
Length = 209
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKTM+ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYIKRK 139
+A + +++ M +Y+ K
Sbjct: 63 MAKADKLRYEKEMKNYVPPK 82
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
EKE K+ + TK K K D PK+PP+AFF F +FR + ++P + S+ +
Sbjct: 72 EKEMKNYVPPKGETKKKFK----DPNAPKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVA 126
Query: 100 KACGEKWKTMTYEEKVKY 117
K GE W ++K Y
Sbjct: 127 KKLGEMWNNTAADDKQPY 144
>gi|148233115|ref|NP_001083698.1| uncharacterized protein LOC399067 [Xenopus laevis]
gi|39645609|gb|AAH63718.1| MGC68625 protein [Xenopus laevis]
Length = 272
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
KK +K+ PK P T + FL + R+ + Q+PD+ I K G +W T+ EK +
Sbjct: 58 KKRKKILPNGPKAPVTGYVRFLNERREQIRAQHPDL-PFPEITKMLGAEWSTLPPHEKQR 116
Query: 117 YYDIATEKRAEFDRAMADY 135
Y D A + ++ + + +Y
Sbjct: 117 YLDEAERDKQQYMKELREY 135
>gi|5764678|gb|AAC27650.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E+WKT + +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTKSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 40 EKEGKSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIG 99
E+E K+ + TK K K D PK+PP+AFF F ++R + ++P + S+ +
Sbjct: 72 EREMKTYIPPKGETKKKFK----DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVA 126
Query: 100 KACGEKWKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
K GE W ++K Y A + + ++++ +A Y
Sbjct: 127 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY 162
>gi|45360537|ref|NP_988941.1| high mobility group 20B [Xenopus (Silurana) tropicalis]
gi|38174731|gb|AAH61376.1| high-mobility group 20A [Xenopus (Silurana) tropicalis]
gi|89268220|emb|CAJ83818.1| high-mobility group 20A [Xenopus (Silurana) tropicalis]
Length = 319
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
KK +K+ PK P T + FL + R+ + Q+PD+ I K G +W T+ EK +
Sbjct: 58 KKRKKILPNGPKAPVTGYVRFLNERREQIRAQHPDL-PFPEITKMLGAEWSTLPPHEKQR 116
Query: 117 YYDIATEKRAEFDRAMADY 135
Y D A + ++ + + +Y
Sbjct: 117 YLDEAERDKQQYMKELREY 135
>gi|402077455|gb|EJT72804.1| non-histone chromosomal protein 6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 101
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 46 ISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEK 105
++AK+ K +K+ K D PK+ +A+ +F + R+ +E+NP + S +GK GE+
Sbjct: 4 VAAKK-GAKTEKRRGKKDPLAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILGER 61
Query: 106 WKTMTYEEKVKY 117
WK ++ +++ Y
Sbjct: 62 WKALSDKQRAPY 73
>gi|342874398|gb|EGU76412.1| hypothetical protein FOXB_13090 [Fusarium oxysporum Fo5176]
Length = 102
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
K+ + KR + K K K D PK+ +A+ +F + R+ +E+NP I S +GK G
Sbjct: 3 KAAAGKRGKAE-KTKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLG 60
Query: 104 EKWKTMTYEEKVKY 117
E+WK + +++ Y
Sbjct: 61 ERWKALNEKQRAPY 74
>gi|290998589|ref|XP_002681863.1| hypothetical protein NAEGRDRAFT_82958 [Naegleria gruberi]
gi|284095488|gb|EFC49119.1| hypothetical protein NAEGRDRAFT_82958 [Naegleria gruberi]
Length = 219
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
KK +K D PKKP T +F F ++ R+ + + + KS + K GE W +++ E+K
Sbjct: 4 KKSTKKKDPNAPKKPKTGYFLFCDEHREAAKAKTGEKKSASEVSKVLGEMWNSLSDEQKK 63
Query: 116 KYYDIATEKRAEFDRAMADYIKRK 139
Y D + ++ M +Y K K
Sbjct: 64 PYNDKYKKSLDGYNAQMEEYKKNK 87
>gi|229594979|ref|XP_001020474.3| HMG box family protein [Tetrahymena thermophila]
gi|225566454|gb|EAS00229.3| HMG box family protein [Tetrahymena thermophila SB210]
Length = 265
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 66 MPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
PKKP +A+ F + + + +NPD+ S I K G++W+ ++ ++K Y + +
Sbjct: 59 APKKPMSAYLIFCQTRQPEIKAKNPDL-SFSEISKVVGQEWRDLSQDKKQGYIKKEEQLK 117
Query: 126 AEFDRAMADYIKRKENGKVENS 147
E++ +A++ +K NG ++S
Sbjct: 118 KEYNSKLAEF-NKKNNGSTQSS 138
>gi|302309282|ref|XP_002999445.1| AGL073C-Ap [Ashbya gossypii ATCC 10895]
gi|299788284|gb|ADJ41738.1| AGL073C-Ap [Ashbya gossypii ATCC 10895]
gi|374109842|gb|AEY98747.1| FAGL073C-Ap [Ashbya gossypii FDAG1]
Length = 374
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P F F + R + NPD KS+ I K GE+W+++ EEK KY D +K
Sbjct: 282 PKRPSGPFIQFTSEMRPKLLKDNPD-KSLIEITKLVGEQWRSLPPEEKQKYTDAYKQKLK 340
Query: 127 EFDRAMAD 134
E++ D
Sbjct: 341 EWEEFYPD 348
>gi|270014157|gb|EFA10605.1| hypothetical protein TcasGA2_TC012866 [Tribolium castaneum]
Length = 840
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 48 AKRVTTKLKKKHEKL--DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEK 105
AK V+ K ++K K D PK+P TAF +L + R + NP IK + I K GE
Sbjct: 660 AKTVSEKPRQKRAKKSKDENKPKRPSTAFMLWLNEMRDKIKADNPGIK-ITEIAKKGGEM 718
Query: 106 WKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
WK + ++K ++ A + + E+++AM +Y
Sbjct: 719 WKEL--KDKSEWEGKAAKAKEEYNKAMKEY 746
>gi|392883818|gb|AFM90741.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D + P+ +++ +F+++ R+ ++++PD K C E+WK MT ++K K+ D
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +DR M Y
Sbjct: 63 LAKNDKVRYDREMRIY 78
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 69 KPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEF 128
+PP+AFF F D R + +NP I + + K GE W +T +++ Y + + + ++
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-FIGDVAKKMGELWSGLTAKDEKPYEERGAQLKEKY 154
Query: 129 DRAMADYIKRKEN 141
++ +A Y R +N
Sbjct: 155 EKEVAAYRARCKN 167
>gi|324500326|gb|ADY40157.1| Protein capicua [Ascaris suum]
Length = 1709
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 68 KKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATE-KRA 126
++P AF F + R E+ P+ + R + K GE W + EEK KY+D+AT+ K A
Sbjct: 1060 RRPMNAFMIFSKRHRPMVHEKYPN-RDNRTVSKILGEWWYALGPEEKQKYHDLATQVKEA 1118
Query: 127 EFDRAMADY------IKRKENGKVENSE--EDSEFDEYE 157
F RA D+ K+ NG + SE +DS ++ E
Sbjct: 1119 HF-RAHPDWKWCSRERKKSTNGTRKESESRDDSSANDIE 1156
>gi|440912073|gb|ELR61675.1| Putative high mobility group protein B3-like protein, partial [Bos
grunniens mutus]
Length = 190
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 57 KKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVK 116
K +K D PK+PP+ FF F +F + NP I S+ + K GE W ++ + K +
Sbjct: 81 KGGKKKDPNAPKRPPSGFFLFFSEFCSKIKSTNPGI-SIGDVAKKLGEMWNNLS-DSKKQ 138
Query: 117 YYDIATEKRAEFDRAMADY 135
Y K ++++ +ADY
Sbjct: 139 LYINKDAKLKKYEKDVADY 157
>gi|325303836|tpg|DAA34592.1| TPA_exp: putative HMG-like protein [Amblyomma variegatum]
Length = 145
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIKSMRA-IGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+A+ +F++ R+ ++++P+ + A K C E+WKTM+ EK +++ +A + + FD
Sbjct: 12 SAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSEGEKKRFHQMADKDKKRFDS 71
Query: 131 AMADY 135
MADY
Sbjct: 72 EMADY 76
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 54 KLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEE 113
K KK+ D PK+P +AFF+F D R +++NPD S+ + K G +W +
Sbjct: 83 KSKKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQENPDA-SVGEVAKELGRRWNEGGDDV 141
Query: 114 KVKY 117
+ KY
Sbjct: 142 QSKY 145
>gi|270005614|gb|EFA02062.1| hypothetical protein TcasGA2_TC007692 [Tribolium castaneum]
Length = 557
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 56 KKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKV 115
KK+ + D PK+ +AFF+F D R + QNP+ + I K G +W E K
Sbjct: 439 KKRKQVKDPNAPKRSLSAFFWFSNDERAKVKSQNPEF-GVGDIAKELGRRWADAEPEMKS 497
Query: 116 KYYDIATEKRAEFDRAMADYIKR 138
KY +A + +A +++ M Y K+
Sbjct: 498 KYEALADKDKARYEKEMTAYKKK 520
>gi|442749197|gb|JAA66758.1| Putative transcription factor a mitochondrial [Ixodes ricinus]
Length = 287
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+PP+ + F+ D RK QNP +K + K EKW K KY ++ E+
Sbjct: 58 PKRPPSGYILFINDTRKTVMRQNPALKPTEVV-KTLAEKWNMADEITKKKYETLSRERME 116
Query: 127 EFDRAMADYIKR 138
F + Y R
Sbjct: 117 AFAKEKEAYTSR 128
>gi|294658818|ref|XP_461149.2| DEHA2F18194p [Debaryomyces hansenii CBS767]
gi|202953408|emb|CAG89532.2| DEHA2F18194p [Debaryomyces hansenii CBS767]
Length = 311
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 63 DSKMPKKPPTAFFYFLE----DFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYY 118
D +PK+P A+ F E + +E+NP ++ + K+ E WK + E++ YY
Sbjct: 141 DPDLPKRPTNAYLIFCEMEKERIKHELEERNPG--AVTELSKSLTEAWKNLDDEKRKPYY 198
Query: 119 DIATEKRAEFDRAMADYIKRKE 140
+ E R + R M+ Y ++K+
Sbjct: 199 KLYEEDRDRYQREMSVYNQKKQ 220
>gi|444515932|gb|ELV11007.1| High mobility group protein B3 [Tupaia chinensis]
Length = 212
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K PK + + +F++ R+ +++NP++ + K C ++WKTM+ +EK K+ +
Sbjct: 3 KSDPKKPKGKVSTYAFFVQTCREEHKKKNPEVPINFTEFSKKCSKRWKTMSGKEKSKFDE 62
Query: 120 IATEKRAEFDRAMADY 135
+A + +D M DY
Sbjct: 63 MAKADKIRYDWEMKDY 78
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D P++PP+ F F +F + NP I S+ + K E W + EK Y A
Sbjct: 89 DPNAPERPPSGFLLFCSEFHLKIKSTNPGI-SIGDVAKKLVEMWNNFSDSEKQPYITKAA 147
Query: 123 EKRAEFDRAMADY 135
+ + ++ + +A+Y
Sbjct: 148 KLKEKYKKDVANY 160
>gi|47227049|emb|CAG00411.1| unnamed protein product [Tetraodon nigroviridis]
Length = 179
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKR 125
P+ +++ YF++ R+ ++++PD + + C E+WKTM+ +EK K+ D+A + +
Sbjct: 12 PRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSRKCSERWKTMSVKEKGKFEDMAKQDK 71
Query: 126 AEFDRAMADYIKRKE 140
+D+ M + + KE
Sbjct: 72 VRYDQEMMNTSQPKE 86
>gi|366994328|ref|XP_003676928.1| hypothetical protein NCAS_0F00880 [Naumovozyma castellii CBS 4309]
gi|342302796|emb|CCC70572.1| hypothetical protein NCAS_0F00880 [Naumovozyma castellii CBS 4309]
Length = 186
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 44 KSISAKRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACG 103
KS+S + ++LKK++ K+P +A+ ++ + R+ E NP+I M+ I K
Sbjct: 30 KSVSRSELRSQLKKENGV------KRPMSAYLFYYQANREKLAEANPNIH-MKDIAKLAS 82
Query: 104 EKWKTMTYEEKVKYYDIATEKRAEFDRAM 132
EKW T++ +EK+ + ++E+ ++ + M
Sbjct: 83 EKWNTLSNQEKLPFERKSSEQMEQYHKQM 111
>gi|91088019|ref|XP_974107.1| PREDICTED: similar to GA18041-PA [Tribolium castaneum]
gi|270012067|gb|EFA08515.1| hypothetical protein TcasGA2_TC006168 [Tribolium castaneum]
Length = 240
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKY 117
PKKP T +F F++D R +QNP++K + + + + WKT+ K KY
Sbjct: 46 PKKPLTPYFKFIQDHRPALLKQNPNLKVTQVVSQLAAD-WKTVDPSLKAKY 95
>gi|444729048|gb|ELW69479.1| High mobility group protein B1 [Tupaia chinensis]
Length = 172
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 72 TAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 130
+++ +F++ ++ ++++PD + K C E+WKTM+ +EK K+ D+A +A ++R
Sbjct: 2 SSYAFFVKTCQEEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFGDVAKADKARYER 61
Query: 131 AMADYI 136
M YI
Sbjct: 62 EMKTYI 67
>gi|66811728|ref|XP_640043.1| PHD zinc finger-containing protein [Dictyostelium discoideum AX4]
gi|60468063|gb|EAL66073.1| PHD zinc finger-containing protein [Dictyostelium discoideum AX4]
Length = 795
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 56 KKKHEKLDSKM-PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEK 114
KK E++++ + P+ +A+F+++ R+ + NPD+ + I K G KWK +T +++
Sbjct: 315 KKIEEEIEAIVRPRSNVSAYFHYMNINREDEKRMNPDV-PLSDISKILGAKWKQLTPDDQ 373
Query: 115 VKYYDIATEKRAEFDRAMADYIKRKENGKVENS 147
+YY+ A E + ++ M Y ++ + +VENS
Sbjct: 374 KEYYEKAREDKIRYENEMVLYNQKCK--EVENS 404
>gi|363755396|ref|XP_003647913.1| hypothetical protein Ecym_7252 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891949|gb|AET41096.1| hypothetical protein Ecym_7252 [Eremothecium cymbalariae
DBVPG#7215]
Length = 464
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 67 PKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIATEKRA 126
PK+P F F + R + NPD KS+ I K GE+W+ + EEK KY D +K
Sbjct: 368 PKRPSGPFIQFTSELRPKLLKDNPD-KSLIEITKLVGEQWRNLPSEEKQKYTDAYKQKLK 426
Query: 127 EFD 129
E++
Sbjct: 427 EWE 429
>gi|410081503|ref|XP_003958331.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
gi|372464919|emb|CCF59196.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
Length = 95
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 53 TKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYE 112
TK + + K D PK+ +A+ +F + R + +NPD+ + IG+ GE+WK + E
Sbjct: 7 TKKRTQRRKKDPNAPKRALSAYMFFANENRDIVRSENPDV-TFGQIGRILGERWKALNAE 65
Query: 113 EKVKY 117
+K Y
Sbjct: 66 DKEPY 70
>gi|91091374|ref|XP_973014.1| PREDICTED: similar to AGAP012335-PA [Tribolium castaneum]
Length = 712
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 48 AKRVTTKLKKKHEKL--DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEK 105
AK V+ K ++K K D PK+P TAF +L + R + NP IK + I K GE
Sbjct: 532 AKTVSEKPRQKRAKKSKDENKPKRPSTAFMLWLNEMRDKIKADNPGIK-ITEIAKKGGEM 590
Query: 106 WKTMTYEEKVKYYDIATEKRAEFDRAMADY 135
WK + ++K ++ A + + E+++AM +Y
Sbjct: 591 WKEL--KDKSEWEGKAAKAKEEYNKAMKEY 618
>gi|344239055|gb|EGV95158.1| High mobility group protein B1 [Cricetulus griseus]
Length = 107
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 61 KLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIK-SMRAIGKACGEKWKTMTYEEKVKYYD 119
K D K P+ +++ +F++ R+ ++++PD + K C E WKT++ +EK K+ D
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFLKKCSENWKTVSAKEKGKFED 62
Query: 120 IATEKRAEFDRAMADYI 136
+A +A ++R M YI
Sbjct: 63 MAKADKARYEREMKTYI 79
>gi|365762037|gb|EHN03653.1| Nhp6bp [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841847|gb|EJT44170.1| NHP6B-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 102
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 49 KRVTTKLKKKHEKLDSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKT 108
K+ TT+ KK D PK+ +A+ +F + R + +NPD+ + +G+ GEKWK
Sbjct: 17 KKRTTRRKK-----DPNAPKRGLSAYMFFANENRDIVRSENPDV-TFGQVGRILGEKWKA 70
Query: 109 MTYEEKVKY 117
+T E+K Y
Sbjct: 71 LTAEDKQPY 79
>gi|367012149|ref|XP_003680575.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
gi|359748234|emb|CCE91364.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
Length = 93
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 63 DSKMPKKPPTAFFYFLEDFRKGFQEQNPDIKSMRAIGKACGEKWKTMTYEEKVKYYDIAT 122
D PK+ +A+ +F + R + +NPD+ + +G+ GE+WK +T +EK Y
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDV-TFGQVGRLLGERWKALTPDEKTPY----- 70
Query: 123 EKRAEFDR 130
E +AE D+
Sbjct: 71 ESKAEADK 78
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.125 0.342
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,381,047,225
Number of Sequences: 23463169
Number of extensions: 92711881
Number of successful extensions: 276182
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 3680
Number of HSP's that attempted gapping in prelim test: 271273
Number of HSP's gapped (non-prelim): 6490
length of query: 157
length of database: 8,064,228,071
effective HSP length: 119
effective length of query: 38
effective length of database: 9,567,078,256
effective search space: 363548973728
effective search space used: 363548973728
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 71 (32.0 bits)