BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031574
MDGKREMSSSFSFTTDLFGTKKSPPPSSTGIFASILSPPSTAMGRNSSNSEILGSWQEQP
SGNQAWNTKQGTPALHTESASCNIPNKDKSYIFKEERAEPCHLSSSLYYGGQDIYSHSLD
TRTPASYPLFKKDGEDDDSDNSNGASRGNWWQGSLYY

High Scoring Gene Products

Symbol, full name Information P value
SIS
AT5G02020
protein from Arabidopsis thaliana 5.3e-17
AT3G55646 protein from Arabidopsis thaliana 3.4e-13
AT5G59080 protein from Arabidopsis thaliana 1.7e-11
AT2G39855 protein from Arabidopsis thaliana 8.4e-10
AT3G46880 protein from Arabidopsis thaliana 1.1e-05
AT5G05965 protein from Arabidopsis thaliana 1.9e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031574
        (157 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2185168 - symbol:SIS "AT5G02020" species:3702 ...   209  5.3e-17   1
TAIR|locus:1009023254 - symbol:AT3G55646 "AT3G55646" spec...   173  3.4e-13   1
TAIR|locus:2153286 - symbol:AT5G59080 "AT5G59080" species...   157  1.7e-11   1
TAIR|locus:504955928 - symbol:AT2G39855 "AT2G39855" speci...   141  8.4e-10   1
TAIR|locus:2102727 - symbol:AT3G46880 "AT3G46880" species...   102  1.1e-05   1
TAIR|locus:504954988 - symbol:AT5G05965 "AT5G05965" speci...   100  1.9e-05   1


>TAIR|locus:2185168 [details] [associations]
            symbol:SIS "AT5G02020" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0009651 "response to salt stress"
            evidence=IMP] [GO:0006914 "autophagy" evidence=RCA] EMBL:CP002688
            GO:GO:0009651 EMBL:AL162508 HOGENOM:HOG000238466 EMBL:AY058150
            EMBL:AY094053 IPI:IPI00528966 PIR:T48223 RefSeq:NP_195822.1
            UniGene:At.23336 UniGene:At.70618 PRIDE:Q9LZM9
            EnsemblPlants:AT5G02020.1 GeneID:831782 KEGG:ath:AT5G02020
            TAIR:At5g02020 eggNOG:NOG285266 InParanoid:Q9LZM9 OMA:KESSYPS
            PhylomeDB:Q9LZM9 ProtClustDB:CLSN2687303 Genevestigator:Q9LZM9
            Uniprot:Q9LZM9
        Length = 149

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 54/150 (36%), Positives = 72/150 (48%)

Query:     9 SSFSFTTDLFGTKKSPP-PSSTGIFASILSPPSTAMGRNSSNSEILGSWQEQPSGNQAWN 67
             SS S T++LFG++++P  PSS+GI  SI  PPS  +GR S         QE  +G   WN
Sbjct:    15 SSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVR-------QETVTGG-CWN 66

Query:    68 TKQGTPALHTESASCNIPNKDKSYIFKEERAEPCHLSSSLYYGGQDIYSHSLDTRTPASY 127
              K      + +       N    Y  +++R +PCHLSSS+YYGG D+Y      +   S 
Sbjct:    67 EKTSKTGGNVDRNREQQENHGSGYQ-QDQRVQPCHLSSSIYYGGPDVY---FQPQNSTSN 122

Query:   128 PLFKKXXXXXXXXXXXXXXXXXWWQGSLYY 157
                KK                 WWQGSLYY
Sbjct:   123 STNKKDGGEDDSGSASRGN---WWQGSLYY 149


>TAIR|locus:1009023254 [details] [associations]
            symbol:AT3G55646 "AT3G55646" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:DQ487550
            IPI:IPI00656872 RefSeq:NP_001030865.1 UniGene:At.63260
            EnsemblPlants:AT3G55646.1 GeneID:3769719 KEGG:ath:AT3G55646
            TAIR:At3g55646 OMA:YNEETEP PhylomeDB:Q1G3N4 Genevestigator:Q2V3P1
            Uniprot:Q1G3N4
        Length = 146

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 52/152 (34%), Positives = 72/152 (47%)

Query:     8 SSSFSFTTDLFGTKKSPPPSS--TGIFASILSPPSTAMGRNSSNSEILGSWQEQPSGNQA 65
             SSS S    +FG + S   SS  TG+F SI  PPS         ++ LG  ++    +Q 
Sbjct:    17 SSSLSSFDHIFGPRVSSSSSSSATGLFKSIFPPPS---------ADQLG--RQVDFASQG 65

Query:    66 WNTKQGTPALHTESASCNIPNKDKSYIFKEERAEPCHLSSSLYYGGQDIYSHSLDTRTPA 125
              + K  +P    E ++     K+K   + EE   PCHLSSSLYYGGQ+ YS +    T  
Sbjct:    66 GHVKYQSPNAKGERSN----KKEKKSYYNEETEPPCHLSSSLYYGGQETYSST----TTT 117

Query:   126 SYPLFKKXXXXXXXXXXXXXXXXXWWQGSLYY 157
             ++  +KK                 WW+GSLYY
Sbjct:   118 THDTYKKDGEEGDSKRASRGN---WWEGSLYY 146


>TAIR|locus:2153286 [details] [associations]
            symbol:AT5G59080 "AT5G59080" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006979 "response to oxidative stress"
            evidence=IMP] EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006979
            EMBL:AB024027 HOGENOM:HOG000238466 EMBL:AY063936 EMBL:AY096481
            EMBL:AK227178 IPI:IPI00534848 RefSeq:NP_200716.1 UniGene:At.27412
            PRIDE:Q9FGU5 EnsemblPlants:AT5G59080.1 GeneID:836025
            KEGG:ath:AT5G59080 TAIR:At5g59080 eggNOG:NOG269666
            InParanoid:Q9FGU5 OMA:RVEPCHL PhylomeDB:Q9FGU5
            ProtClustDB:CLSN2914854 ArrayExpress:Q9FGU5 Genevestigator:Q9FGU5
            Uniprot:Q9FGU5
        Length = 135

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 48/143 (33%), Positives = 64/143 (44%)

Query:    19 GTKKSPPPSSTG-IFASI-LSPPSTAMGRNSSNSEILGSWQEQPSGNQAWNTKQGTPALH 76
             G+  S   S T  +F S   SPPS++ G  S+    +     + S     N+K G+ A  
Sbjct:     8 GSSSSTSSSFTAELFGSKDPSPPSSSSGIFST----MFPHPSKGSARDGSNSKHGSQAQR 63

Query:    77 TESASCNIPNKDKSYIFKEERAEPCHLSSSLYYGGQDIYSHSLDTRT--PASYPLFKKXX 134
              ES +            +E+R EPCHLSSSLYYGGQD+Y+ S   +T  P      +   
Sbjct:    64 RESLNA-----------QEDRVEPCHLSSSLYYGGQDVYARSTTNQTYPPVKNDRRRSGE 112

Query:   135 XXXXXXXXXXXXXXXWWQGSLYY 157
                            WWQGSLYY
Sbjct:   113 DDANGQNPQDVSRGNWWQGSLYY 135

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 29/68 (42%), Positives = 41/68 (60%)

Query:     1 MDGKREM----SSSFSFTTDLFGTKK-SPPPSSTGIFASILSPPSTAMGRNSSNSEILGS 55
             M+GK  +    S+S SFT +LFG+K  SPP SS+GIF+++   PS    R+ SNS+    
Sbjct:     1 MEGKGRVGSSSSTSSSFTAELFGSKDPSPPSSSSGIFSTMFPHPSKGSARDGSNSKHGSQ 60

Query:    56 WQEQPSGN 63
              Q + S N
Sbjct:    61 AQRRESLN 68


>TAIR|locus:504955928 [details] [associations]
            symbol:AT2G39855 "AT2G39855" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AY219115
            IPI:IPI00546582 RefSeq:NP_850323.2 UniGene:At.46694
            EnsemblPlants:AT2G39855.1 GeneID:818573 KEGG:ath:AT2G39855
            TAIR:At2g39855 eggNOG:NOG247957 InParanoid:Q84WZ4 PhylomeDB:Q84WZ4
            Genevestigator:Q84WZ4 Uniprot:Q84WZ4
        Length = 151

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 47/124 (37%), Positives = 64/124 (51%)

Query:     1 MDGKREMS---SSFSFTTD-LFGTKKSPPPSS--TGIFASILSPPSTAMGRNSSNSEILG 54
             MD K+ +S   SS S + D +FG + S   SS  TG+F SI  PPS     N ++    G
Sbjct:     1 MDKKKSVSGSSSSSSSSLDHIFGPRVSHSYSSSTTGLFKSIFPPPSAVTQGNLTSRN--G 58

Query:    55 SWQEQPSGNQAWNTKQGTPALHTESASCNIPNKDKSYIFKEERAEPCHLSSSLYYGGQDI 114
             + + QP+  +       TP    E +     NK++     EE   PC+LSSS+YYGGQD 
Sbjct:    59 AAKYQPTNFE-------TPNERGERSK----NKERKSYQSEETQPPCNLSSSIYYGGQDN 107

Query:   115 YSHS 118
             YS S
Sbjct:   108 YSSS 111


>TAIR|locus:2102727 [details] [associations]
            symbol:AT3G46880 "AT3G46880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL096859
            HOGENOM:HOG000238466 IPI:IPI00546824 PIR:T12960 RefSeq:NP_190272.1
            UniGene:At.53806 EnsemblPlants:AT3G46880.1 GeneID:823841
            KEGG:ath:AT3G46880 TAIR:At3g46880 eggNOG:NOG267586
            InParanoid:Q9STG0 OMA:HYITRSF PhylomeDB:Q9STG0
            ProtClustDB:CLSN2915678 Genevestigator:Q9STG0 Uniprot:Q9STG0
        Length = 153

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 30/89 (33%), Positives = 49/89 (55%)

Query:    43 MGRNSSNS---EILGSWQEQPSGNQAWNTKQGTPALHTESASCNIPNKDKSYIFKEERAE 99
             +G +SS+S   ++ G   ++PS +  +N+    P   ++  + NI +     + + + A 
Sbjct:     7 VGSSSSSSFTAQLFGP--KEPSSSANFNSI--FPP--SKGTARNILSSKHGSLEQRKEAG 60

Query:   100 PCHLSSSLYYGGQDIYSHSLDTRTPASYP 128
              C+LSSSLYYGGQD+YSH     T   YP
Sbjct:    61 TCNLSSSLYYGGQDVYSHPTHNHT---YP 86


>TAIR|locus:504954988 [details] [associations]
            symbol:AT5G05965 "AT5G05965" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AY735673
            IPI:IPI00516315 RefSeq:NP_680147.1 UniGene:At.43072
            UniGene:At.66777 EnsemblPlants:AT5G05965.1 GeneID:830482
            KEGG:ath:AT5G05965 TAIR:At5g05965 eggNOG:NOG286329
            HOGENOM:HOG000238466 OMA:DERSSHE ProtClustDB:CLSN2917816
            Genevestigator:Q5XV49 Uniprot:Q5XV49
        Length = 131

 Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 36/136 (26%), Positives = 53/136 (38%)

Query:    22 KSPPPSSTGIFASILSPPSTAMGRNSSNSEILGSWQEQPSGNQAWNTKQGTPALHTESAS 81
             K+   S +  F ++  P  +A    SS S IL S    P        K+G+        +
Sbjct:     7 KAASSSHSSSFDNLFGPKGSASA--SSCSTILDSIFPPPVAR-----KKGSHTAPEVQGN 59

Query:    82 CNIPNKDKSYIFKEERAEPCHLSSSLYYGGQDIYSHSLDTRTPASYPLFKKXXXXXXXXX 141
              +    ++S     E+ E  + SSS+YYGGQ  YS      +  S P  +          
Sbjct:    60 ISQATDERS---SHEKRESSYYSSSIYYGGQQHYSPPRTDGSSTS-PSHQPKETNDRTDI 115

Query:   142 XXXXXXXXWWQGSLYY 157
                     WW+GSLYY
Sbjct:   116 TTSTSRGNWWKGSLYY 131


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.126   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      157       140   0.00091  102 3  11 23  0.39    32
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  571 (61 KB)
  Total size of DFA:  150 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  16.74u 0.07s 16.81t   Elapsed:  00:00:17
  Total cpu time:  16.74u 0.07s 16.81t   Elapsed:  00:00:19
  Start:  Thu May  9 13:39:10 2013   End:  Thu May  9 13:39:29 2013

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