BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031582
(157 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + DG +
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 365
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 366 FPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 425
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 426 IREADIDGDGQVNYEEF 442
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Query: 80 NT 81
T
Sbjct: 446 MT 447
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 82.4 bits (202), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + DG +
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 364
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 365 FPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 424
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 425 IREADIDGDGQVNYEEF 441
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 385 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
Query: 80 NT 81
T
Sbjct: 445 MT 446
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 82.4 bits (202), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + DG +
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 364
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 365 FPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 424
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 425 IREADIDGDGQVNYEEF 441
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 385 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
Query: 80 NT 81
T
Sbjct: 445 MT 446
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T V E F FD D DG IT EL + S+G +E ++R+MM + D + +G +
Sbjct: 5 TEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVD 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ LG LS + E+
Sbjct: 65 FPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEM 124
Query: 133 IASMDGDGDGAVSFEDLQLIVNS 155
I + D DGDG V++E+ ++ S
Sbjct: 125 IRAADTDGDGQVNYEEFVRVLVS 147
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + DG +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Query: 80 NT 81
T
Sbjct: 145 MT 146
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 133 IASMDGDGDGAVSFEDLQLIVNS 155
I D DGDG V++E+ ++ S
Sbjct: 126 IREADIDGDGQVNYEEFVTMMTS 148
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 133 IASMDGDGDGAVSFEDLQLIVNS 155
I D DGDG V++E+ ++ S
Sbjct: 125 IREADIDGDGQVNYEEFVTMMTS 147
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + DG +
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 364
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 365 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 424
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 425 IREADIDGDGQVNYEEF 441
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 385 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
Query: 80 NT 81
T
Sbjct: 445 MT 446
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 366 FPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 425
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 426 IREADIDGDGQVNYEEF 442
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Query: 80 NT 81
T
Sbjct: 446 MT 447
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 133 IASMDGDGDGAVSFEDLQLIVNS 155
I D DGDG V++E+ ++ S
Sbjct: 126 IRESDIDGDGQVNYEEFVTMMTS 148
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL + + M+ LK AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 65 FPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 125 IREADVDGDGQVNYEEF 141
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 19 SLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
L E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++
Sbjct: 84 KLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQ 143
Query: 79 M 79
+
Sbjct: 144 V 144
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 2 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL + + M+ LK AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 62 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 121
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 122 IREADVDGDGQVNYEEF 138
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF+++
Sbjct: 82 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 141
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 77/145 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 133 IASMDGDGDGAVSFEDLQLIVNSLL 157
I D DGDG V++E+ ++ + L
Sbjct: 126 IREADIDGDGQVNYEEFVQMMTAKL 150
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL + + M+ LK AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 65 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 125 IREADVDGDGQVNYEEF 141
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF+++
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 133 IASMDGDGDGAVSFEDLQLIVNS 155
I D DGDG V++E+ ++ +
Sbjct: 126 IREADIDGDGQVNYEEFVTMMTT 148
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF+ M
Sbjct: 85 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 144
Query: 80 NT 81
T
Sbjct: 145 MT 146
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 123 IREADIDGDGQVNYEEF 139
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Query: 80 NT 81
T
Sbjct: 143 MT 144
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 11 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 70
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 71 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 130
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 131 IREADIDGDGQVNYEEF 147
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 91 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 150
Query: 80 NT 81
T
Sbjct: 151 MT 152
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Query: 80 NT 81
T
Sbjct: 145 MT 146
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 80 NT 81
T
Sbjct: 146 MT 147
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 80 NT 81
T
Sbjct: 146 MT 147
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 123 IREADIDGDGQVNYEEF 139
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Query: 80 NT 81
T
Sbjct: 143 MT 144
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 120
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 121 IREADIDGDGQVNYEEF 137
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 81 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 140
Query: 80 NT 81
T
Sbjct: 141 MT 142
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 4 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 63
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 64 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 123
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 124 IREADIDGDGQVNYEEF 140
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 84 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 143
Query: 80 NT 81
T
Sbjct: 144 MT 145
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 123 IREADIDGDGQVNYEEF 139
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Query: 80 NT 81
T
Sbjct: 143 MT 144
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 7 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 66
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 67 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 126
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 127 IREADIDGDGQVNYEEF 143
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 87 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 146
Query: 80 NT 81
T
Sbjct: 147 MT 148
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 2 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 62 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 121
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 122 IREADIDGDGQVNYEEF 138
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 82 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 141
Query: 80 NT 81
T
Sbjct: 142 MT 143
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 9 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 68
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 128
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 129 IREADIDGDGQVNYEEF 145
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 89 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 148
Query: 80 NT 81
T
Sbjct: 149 MT 150
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 80 NT 81
T
Sbjct: 146 MT 147
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Query: 80 NT 81
T
Sbjct: 145 MT 146
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + DG +
Sbjct: 297 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 356
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 357 FPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 416
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 417 IREADIDGDGQVNYEEF 433
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 377 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 436
Query: 80 NT 81
T
Sbjct: 437 MT 438
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
K AF + DGD +T EL V+ +LG + A+ Q++I +D DGDG + F + ++
Sbjct: 304 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIM 363
Query: 153 V 153
+
Sbjct: 364 M 364
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 272 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 331
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 332 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 391
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 392 IREADIDGDGQVNYEEF 408
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 352 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 411
Query: 80 NT 81
T
Sbjct: 412 MT 413
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 272 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 331
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 332 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 391
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 392 IREADIDGDGQVNYEEF 408
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 352 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 411
Query: 80 NT 81
T
Sbjct: 412 MT 413
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEM 125
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 80 NT 81
T
Sbjct: 146 MT 147
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEM 124
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Query: 80 NT 81
T
Sbjct: 145 MT 146
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 269 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 328
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 329 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 388
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 389 IREADIDGDGQVNYEEF 405
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 349 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 408
Query: 80 NT 81
T
Sbjct: 409 MT 410
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 366 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 425
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 426 IREADIDGDGQVNYEEF 442
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Query: 80 NT 81
T
Sbjct: 446 MT 447
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 366 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 425
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 426 IREADIDGDGQVNYEEF 442
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Query: 80 NT 81
T
Sbjct: 446 MT 447
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 307 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 366
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 367 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 426
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 427 IREADIDGDGQVNYEEF 443
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 387 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 446
Query: 80 NT 81
T
Sbjct: 447 MT 448
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + ++
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQM 125
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V +M+R+ D + DG ++ EEF++M
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQM 145
Query: 80 NT 81
T
Sbjct: 146 MT 147
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 65 FPEFLTMMARKMKDSE--EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 133 IASMDGDGDGAVSFEDLQLIVNS 155
I D DGDG V++E+ ++ S
Sbjct: 123 IREADIDGDGQVNYEEFVTMMTS 145
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 133 IASMDGDGDGAVSFEDL 149
I + DGDG V++E+
Sbjct: 125 IREANIDGDGQVNYEEF 141
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ + + DG ++ EEF++M
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQM 144
Query: 80 NT 81
T
Sbjct: 145 MT 146
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 366 FPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 425
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 426 IREADIDGDGQVNYEEF 442
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Query: 80 NT 81
T
Sbjct: 446 MT 447
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL + + M+ L AF+ + DG+ +++ AEL V+ NLG L+ + E+
Sbjct: 65 FPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEM 124
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG +++E+
Sbjct: 125 IREADIDGDGHINYEEF 141
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L+E F+ FD D +G I+ AEL + ++G + ++++V EM+R+ D + DG ++ EEF+ M
Sbjct: 85 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL + + M+ L AF+ + DG+ +++ AEL V+ NLG L+ + E+
Sbjct: 65 FPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEM 124
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG +++E+
Sbjct: 125 IREADIDGDGHINYEEF 141
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L+E F+ FD D +G I+ AEL + ++G + ++++V EM+R+ D + DG ++ EEF+ M
Sbjct: 85 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + + E F FD D DG IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL + + M+ LK AF + D + ++ AEL V+ NLG L+ + E+
Sbjct: 66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG +++E+
Sbjct: 126 IREADVDGDGQINYEEF 142
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF+++
Sbjct: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 145
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL M + M+ + ++ AF + DG+ ++ AEL V+ NLG L+ + E+
Sbjct: 61 FPEFLTMMARKMK-DTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 119
Query: 133 IASMDGDGDGAVSFEDL 149
I + DGDG V++E+
Sbjct: 120 IREANIDGDGQVNYEEF 136
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ + + DG ++ EEF++M
Sbjct: 80 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQM 139
Query: 80 NT 81
T
Sbjct: 140 MT 141
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + + E F FD D DG IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 6 TEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL + + M+ LK AF + D + ++ AEL V+ NLG L+ + E+
Sbjct: 66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG +++++
Sbjct: 126 IREADVDGDGQINYDEF 142
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ +EF+++
Sbjct: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKV 145
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Query: 7 LSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTN 66
LSEE ++ E F FD D DG IT EL+ + S+ +EE++++M+ + D +
Sbjct: 4 LSEE-----QIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDAD 58
Query: 67 NDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSL 126
+G + +EFL + K ++ LK AF+ + D + ++ +EL V+ NLG L+
Sbjct: 59 GNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTD 118
Query: 127 ADCQEIIASMDGDGDGAVSFEDL 149
+ +++I D DGDG V++E+
Sbjct: 119 EEVEQMIKEADLDGDGQVNYEEF 141
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E F+ FD D +G I+ +EL + ++G + ++E+V +M+++ D + DG ++ EEF++M
Sbjct: 85 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 144
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 125 SLADCQEIIASMDGDGDGAVSFEDLQLIVNSL 156
+ D +E D DGDG ++ E+L ++ SL
Sbjct: 8 QIVDFKEAFGLFDKDGDGCITVEELATVIRSL 39
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++ + + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL + + ++ AF + DG+ ++ AEL V NLG L+ + E
Sbjct: 65 FPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEX 124
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V E +R+ D + DG ++ EEF++
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQX 144
Query: 80 NT 81
T
Sbjct: 145 XT 146
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++ + + D + +G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTID 65
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL + + ++ AF + DG+ ++ AEL V NLG L+ + +
Sbjct: 66 FPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQX 125
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V + +R+ D + DG ++ EEF++
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFVQX 145
Query: 80 NT 81
T
Sbjct: 146 XT 147
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++ + + D + +G ++
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTIN 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL + + ++ AF + DG+ ++ AEL V NLG L+ + E
Sbjct: 65 FPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEX 124
Query: 133 IASMDGDGDGAVSFEDL 149
I D DGDG V++E+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V E +R+ D + DG ++ EEF++
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQX 144
Query: 80 NT 81
T
Sbjct: 145 XT 146
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 74/143 (51%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + + F FD + G I EL + ++G +E ++++++ + + NN+G L+
Sbjct: 5 TEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLN 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EF + K M ++ AF+ + DGD ++ AEL V+ NLG ++ + E+
Sbjct: 65 FTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEM 124
Query: 133 IASMDGDGDGAVSFEDLQLIVNS 155
I D DGDG +++E+ +++
Sbjct: 125 IREADFDGDGMINYEEFVWMISQ 147
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG IT +L + S+G +E ++++M+ + + +G +
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTID 365
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
+FL M + M+ ++ AF DG+ ++ A+L V+ NLG L+ + E+
Sbjct: 366 FPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEM 425
Query: 133 IASMDGDGDGAVSFEDL 149
I DGDG V++E
Sbjct: 426 IREAGIDGDGQVNYEQF 442
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR F D +G I+ A+L + ++G + ++E+V EM+R+ + DG ++ E+F++M
Sbjct: 386 IREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQM 445
Query: 80 NT 81
T
Sbjct: 446 MT 447
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 4 SRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQG 63
S+ L+EE + E F FD DN GSI+ +EL+ + S+G SE +V ++M +
Sbjct: 2 SQNLTEE-----QIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEI 56
Query: 64 DTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVG 123
D + + + EFL + ++ ++ L AF+ + +GD +++ AEL V+ ++G
Sbjct: 57 DVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK 116
Query: 124 LSLADCQEIIASMDGDGDGAVSFEDLQLIVN 154
L+ A+ E++ + DG G ++ + +++
Sbjct: 117 LTDAEVDEMLREV-SDGSGEINIKQFAALLS 146
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD DN+GSI+ +EL+ + S+G SE +V ++M + D + + +
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL + ++ ++ L AF+ + +GD +++ AEL V+ ++G L+ A+ ++
Sbjct: 65 FSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDM 124
Query: 133 IASMDGDGDGAVSFEDL 149
+ + DG G ++ +
Sbjct: 125 LREV-SDGSGEINIQQF 140
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L+E F+ FD + DG I+ AEL + S+G + ++ +V +M+R+ ++ G +++++F +
Sbjct: 85 LLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEINIQQFAAL 143
Query: 80 NTK 82
+K
Sbjct: 144 LSK 146
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD DN+GSI+ +EL+ + S+G SE +V ++M + D + + +
Sbjct: 6 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 65
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
EFL + ++ ++ L AF+ + +GD +++ AEL V+ ++G L+ A+ ++
Sbjct: 66 FSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDM 125
Query: 133 IASMDGDGDGAVSFEDL 149
+ + DG G ++ +
Sbjct: 126 LREV-SDGSGEINIQQF 141
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L+E F+ FD + DG I+ AEL + S+G + ++ +V +M+R+ ++ G +++++F +
Sbjct: 86 LLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEINIQQFAAL 144
Query: 80 NTKDMELGSLGNLLK 94
+K G+ L+
Sbjct: 145 LSKGSSTGTRRKALR 159
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 5 RPLSEETETLN--HVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQ 62
R LS + +L + L E FR FD D DG I +L ++GY +E ++ E+ +Q
Sbjct: 10 RNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQ 69
Query: 63 GDTNNDGLLSLEEFLEM-------NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHE 115
+ N G + ++F+E+ T DM +G L+ AF + +GD ++ +EL E
Sbjct: 70 INMNLGGHVDFDDFVELMGPKLLAETADM-IGV--KELRDAFREFDTNGDGEISTSELRE 126
Query: 116 VIEN-LGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
+ LG + D +EII +D +GDG V FE+
Sbjct: 127 AMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 161
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 10 ETETLNHVLSLVETFRAFDSDNDGSITGAELS-GIFNSVGYRASEEDVREMMRQGDTNND 68
ET + V L + FR FD++ DG I+ +EL + +G++ D+ E++R D N D
Sbjct: 94 ETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGD 153
Query: 69 GLLSLEEFLEMNTK 82
G + EEF+ M ++
Sbjct: 154 GRVDFEEFVRMMSR 167
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E FR FD D DG I +L ++GY +E ++ E+ +Q + N G + ++F+E+
Sbjct: 13 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 72
Query: 80 -------NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIEN-LGVGLSLADCQE 131
T DM +G L+ AF + +GD ++ +EL E + LG + D +E
Sbjct: 73 MGPKLLAETADM-IGV--KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEE 129
Query: 132 IIASMDGDGDGAVSFEDL 149
II +D +GDG V FE+
Sbjct: 130 IIRDVDLNGDGRVDFEEF 147
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 10 ETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSV-GYRASEEDVREMMRQGDTNND 68
ET + V L + FR FD++ DG I+ +EL + G++ D+ E++R D N D
Sbjct: 80 ETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGD 139
Query: 69 GLLSLEEFLEMNTK 82
G + EEF+ M ++
Sbjct: 140 GRVDFEEFVRMMSR 153
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD+D G+I EL ++G+ +E++++M+ D + G +
Sbjct: 3 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTID 62
Query: 73 LEEFLEMNTKDM-ELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQE 131
EEFL+M T M E S ++K AF + D ++ L V + LG ++ + QE
Sbjct: 63 FEEFLQMMTAKMGERDSREEIMK-AFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 132 IIASMDGDGDGAVSFEDLQLIVNS 155
+I D DGDG V+ E+ I+
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIMKK 145
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E FR FD D DG I +L ++GY +E ++ E+ +Q + N G + ++F+E+
Sbjct: 13 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 72
Query: 80 -------NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIEN-LGVGLSLADCQE 131
T DM +G L+ AF + +GD ++ +EL E + LG + D +E
Sbjct: 73 MGPKLLAETADM-IGV--KELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEE 129
Query: 132 IIASMDGDGDGAVSFEDL 149
II +D +GDG V FE+
Sbjct: 130 IIRDVDLNGDGRVDFEEF 147
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 10 ETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSV-GYRASEEDVREMMRQGDTNND 68
ET + V L + FR FD++ DG I+ +EL ++ G++ D+ E++R D N D
Sbjct: 80 ETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGD 139
Query: 69 GLLSLEEFLEMNTK 82
G + EEF+ M ++
Sbjct: 140 GRVDFEEFVRMMSR 153
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 65/118 (55%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD DN+GSI+ +EL+ + S+G SE +V ++M + D + + +
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQ 130
EFL + ++ ++ L AF+ + +GD +++ AEL V+ ++G L+ A+ +
Sbjct: 65 FSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + D + ++ +EL V+ +LG+ S A+ +++ +D DG+ + F +
Sbjct: 12 FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E F FD+D G+I EL ++G+ +E++++M+ + D + G + EEFL M
Sbjct: 30 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTM 89
Query: 80 NTKDM-ELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDG 138
T M E S +LK AF + D +T +L V + LG L+ + QE+IA D
Sbjct: 90 MTAKMGERDSREEILK-AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADR 148
Query: 139 DGDGAV 144
+ D +
Sbjct: 149 NDDNEI 154
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+++ FR FD DN G+IT +L + +G +EE+++EM+ + D N+D + +EF+ +
Sbjct: 103 ILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRI 162
Query: 80 NTK 82
K
Sbjct: 163 MKK 165
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
++ AF+ + DG + EL + LG + +++I+ +D DG G + FE+
Sbjct: 30 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEF 86
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E FR FD + DG I EL+ IF + G ++E++ +M+ GD NNDG + +EFL+M
Sbjct: 95 LAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKM 154
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
KAAF+ + DG ++ EL V+ LG + + II +D DG G + FE+ ++
Sbjct: 19 FKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVM 78
Query: 153 V 153
+
Sbjct: 79 M 79
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E FR FD + DG I EL+ IF + G ++E++ +M+ GD NNDG + +EFL+M
Sbjct: 95 LAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKM 154
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
KAAF+ + DG ++ EL V+ LG + + II +D DG G + FE+ ++
Sbjct: 19 FKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVM 78
Query: 153 V 153
+
Sbjct: 79 M 79
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 11 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 70
Query: 80 NT 81
T
Sbjct: 71 MT 72
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
++ AF + DG+ ++ AEL V+ NLG L+ + E+I D DGDG V++E+
Sbjct: 11 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
Query: 80 NT 81
T
Sbjct: 64 MT 65
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
++ AF + DG+ ++ AEL V+ NLG L+ + E+I D DGDG V++E+
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 10 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 69
Query: 80 NT 81
T
Sbjct: 70 MT 71
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
++ AF + DG+ ++ AEL V+ NLG L+ + E+I D DGDG V++E+
Sbjct: 10 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 8 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 67
Query: 80 NT 81
T
Sbjct: 68 MT 69
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
++ AF + DG+ ++ AEL V+ NLG L+ + E+I D DGDG V++E+
Sbjct: 8 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
Query: 80 NT 81
T
Sbjct: 67 MT 68
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
++ AF + DG+ ++ AEL V+ NLG L+ + E+I D DGDG V++E+
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD+D G+I EL ++G+ +E++++M+ + D G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 73 LEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
+FL + T+ M + AF+ + D ++ L V + LG L+ + QE+
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 133 IASMDGDGDGAVSFEDLQLIVNS 155
I D DGDG VS ++ I+
Sbjct: 121 IDEADRDGDGEVSEQEFLRIMKK 143
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
++ AF + DG+ ++ AEL V+ NLG L+ + E+I D DGDG V++E+
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%)
Query: 15 NHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLE 74
+ V E F FDS+ G IT L + G R EM + D +G +
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62
Query: 75 EFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEII 133
EFL M + M+ + ++L+ AF + + +G + A L + + NLG L + E +
Sbjct: 63 EFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E FR FD D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF+++
Sbjct: 6 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 65
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
LK AF + D + ++ AEL V+ NLG L+ + E+I D DGDG +++E+
Sbjct: 6 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L+E F+ FD D +G I+ AEL + ++G + ++++V EM+R+ D + DG ++ EEF+ M
Sbjct: 10 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 69
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 96 AFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
AF+ + DG+ +++ AEL V+ NLG L+ + E+I D DGDG +++E+
Sbjct: 13 AFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 66
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 42/62 (67%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR FD D +G I+ A+L + ++G + ++E+V EM+R+ D + DG ++ E+F++M
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQM 68
Query: 80 NT 81
T
Sbjct: 69 MT 70
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
++ AF + DG+ ++ A+L V+ NLG L+ + E+I D DGDG V++ED
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDF 65
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L + FR FD + DG I EL I + G +EED+ ++M+ D NNDG + +EFL+M
Sbjct: 98 LADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
KAAF+ + DG ++ EL V+ LG + + II +D DG G + FE+ ++
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 153 V 153
+
Sbjct: 82 M 82
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L FR FD + DG I EL I + G +EED+ ++M+ D NNDG + +EFL+M
Sbjct: 98 LANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
Score = 32.7 bits (73), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
KAAF+ + DG ++ EL V+ LG + + II +D DG G + FE+ ++
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 153 V 153
+
Sbjct: 82 M 82
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L FR FD + DG I EL I + G +EED+ ++M+ D NNDG + +EFL+M
Sbjct: 95 LANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 154
Score = 32.7 bits (73), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
KAAF+ + DG ++ EL V+ LG + + II +D DG G + FE+ ++
Sbjct: 19 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 78
Query: 153 V 153
+
Sbjct: 79 M 79
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L + FR FD + DG I EL I + G +EED+ ++M+ D NNDG + +EFL+M
Sbjct: 98 LEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
Score = 32.7 bits (73), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
KAAF+ + DG ++ EL V+ LG + + II +D DG G + FE+ ++
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 153 V 153
+
Sbjct: 82 M 82
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E FR D D +G I+ AEL + ++G + ++E+V EM+R+ D + DG ++ EEF++M
Sbjct: 31 IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 90
Query: 80 NT 81
T
Sbjct: 91 MT 92
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
++ AF + DG+ ++ AEL V+ NLG L+ + E+I D DGDG V++E+
Sbjct: 31 IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 87
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
L + FR FD + DG I EL + + G +E+D+ E+M+ GD NNDG + +EFLE
Sbjct: 97 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGN 91
DG I+ EL + +G + E+++EM+ + D + G + +EFL M + M+ S G
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGK 92
Query: 92 L---LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 148
L F + + D + EL +++ G ++ D +E++ D + DG + +++
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 149 L 149
Sbjct: 153 F 153
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
N KAAF+ L +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 150 QLIV 153
+++
Sbjct: 78 LVMM 81
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
L + FR FD + DG I EL + + G +E+D+ E+M+ GD NNDG + +EFLE
Sbjct: 17 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 75
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L + FR FD + DG I EL + + G +E+D+ E+M+ GD NNDG + +EFLE
Sbjct: 97 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 156
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGN 91
DGSI+ EL + +G + E+++EM+ + D + G + +EFL M + M+ S G
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 92 L---LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 148
L F + + D + EL +++ G ++ D +E++ D + DG + +++
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 149 L 149
Sbjct: 153 F 153
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED- 148
N KAAF+ L +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 149 LQLIVNSL 156
L ++V S+
Sbjct: 78 LVMMVRSM 85
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
L + FR FD + DG I EL + + G +E+D+ E+M+ GD NNDG + +EFLE
Sbjct: 97 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGN 91
DGSI+ EL + +G + E+++EM+ + D + G + +EFL M + M+ S G
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 92 L---LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 148
L F + + D + EL +++ G ++ D +E++ D + DG + +++
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 149 L 149
Sbjct: 153 F 153
Score = 33.9 bits (76), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED- 148
N KAAF+ L +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 149 LQLIVNSL 156
L ++V S+
Sbjct: 78 LVMMVRSM 85
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L + FR FD + DG I EL + + G +E+D+ E+M+ GD NNDG + +EFLE
Sbjct: 7 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 66
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L + FR FD + DG I EL + + G +E+D+ E+M+ GD NNDG + +EFLE
Sbjct: 9 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 68
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L + FR FD + DG I EL + + G +E+D+ E+M+ GD NNDG + +EFLE
Sbjct: 12 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 71
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L FR FD + DG I EL I + G EED+ ++M+ D NNDG + +EFL+M
Sbjct: 12 LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKM 71
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E F+ FD D +G I+ +EL + ++G + ++E+V +M+++ D + DG ++ EEF++M
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
LK AF+ + D + ++ +EL V+ NLG L+ + +++I D DGDG V++E+
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L + FR FD + DG I EL + + G +E+D+ E+M+ GD NNDG + +EFLE
Sbjct: 8 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 67
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L FR FD + DG I EL I + G EED+ ++M+ D NNDG + +EFL+M
Sbjct: 98 LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
KAAF+ + DG ++ EL V+ LG + + II +D DG G + FE+ ++
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 153 V 153
+
Sbjct: 82 M 82
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 1 MAESRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMM 60
+AES LSEE + L E F D+D G IT EL VG E ++ ++
Sbjct: 17 IAES--LSEE-----EIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLX 69
Query: 61 RQGDTNNDGLLSLEEF----LEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEV 116
+ D +N G + +EF L +N + E + L AAF + DG +T EL +
Sbjct: 70 QAADVDNSGTIDYKEFIAATLHLNKIERE-----DHLFAAFTYFDKDGSGYITPDELQQA 124
Query: 117 IENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
E GV +E+ +D D DG + + +
Sbjct: 125 CEEFGV--EDVRIEELXRDVDQDNDGRIDYNEF 155
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVR--EMMRQGDTNNDGLLSLEEFL 77
L F FD D G IT EL G EDVR E+ R D +NDG + EF+
Sbjct: 101 LFAAFTYFDKDGSGYITPDELQQACEEFGV----EDVRIEELXRDVDQDNDGRIDYNEFV 156
Query: 78 EMNTK 82
K
Sbjct: 157 AXXQK 161
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E F+ FD D +G I+ +EL + ++G + ++E+V +M+++ D + DG ++ EEF++M
Sbjct: 11 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 70
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
LK AF+ + D + ++ +EL V+ NLG L+ + +++I D DGDG V++E+
Sbjct: 11 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 67
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 30/142 (21%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNT 81
E F+ FD DNDG ++ EL S+G + ++ + Q +N
Sbjct: 9 ECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ----------------LNA 52
Query: 82 KDMELGSLGNLLKA--------------AFESLNLDGDDILTGAELHEVIENLGVGLSLA 127
K+ +L + + + AF +L+ +G+ + AEL +++ NLG L+ +
Sbjct: 53 KEFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSS 112
Query: 128 DCQEIIASMDGDGDGAVSFEDL 149
+ +E++ + GDGA+++E
Sbjct: 113 EVEELMKEVSVSGDGAINYESF 134
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 5 RPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGD 64
+P+ TE +L + FRA D + +G+I AEL + ++G + +V E+M++
Sbjct: 66 KPIKTPTEQSKEML---DAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVS 122
Query: 65 TNNDGLLSLEEFLEM 79
+ DG ++ E F++M
Sbjct: 123 VSGDGAINYESFVDM 137
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + DG +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Query: 73 LEEFLEMNTKDME 85
EFL M + M+
Sbjct: 65 FPEFLTMMARKMK 77
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + DGD +T EL V+ +LG + A+ Q++I +D DGDG + F +
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 68
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 15 NHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLE 74
+ + L + F+ D DN GS++ E F S+ V+ ++ DT+ +G + +
Sbjct: 17 DEIKRLGKRFKKLDLDNSGSLSVEE----FMSLPELQQNPLVQRVIDIFDTDGNGEVDFK 72
Query: 75 EFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQ---- 130
EF+E ++ G L+ AF ++D D ++ EL +V++ + VG +L D Q
Sbjct: 73 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM-VGNNLKDTQLQQI 131
Query: 131 --EIIASMDGDGDGAVSFEDLQLIVNSL 156
+ I + D DGDG +SFE+ +V L
Sbjct: 132 VDKTIINADKDGDGRISFEEFCAVVGGL 159
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 15 NHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLE 74
+ + L + F+ D DN GS++ E F S+ V+ ++ DT+ +G + +
Sbjct: 18 DEIKRLGKRFKKLDLDNSGSLSVEE----FMSLPELQQNPLVQRVIDIFDTDGNGEVDFK 73
Query: 75 EFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQ---- 130
EF+E ++ G L+ AF ++D D ++ EL +V++ + VG +L D Q
Sbjct: 74 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM-VGNNLKDTQLQQI 132
Query: 131 --EIIASMDGDGDGAVSFEDLQLIVNSL 156
+ I + D DGDG +SFE+ +V L
Sbjct: 133 VDKTIINADKDGDGRISFEEFCAVVGGL 160
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 15 NHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLE 74
+ + L + F+ D DN GS++ E F S+ V+ ++ DT+ +G + +
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEE----FMSLPELQQNPLVQRVIDIFDTDGNGEVDFK 58
Query: 75 EFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQ---- 130
EF+E ++ G L+ AF ++D D ++ EL +V++ + VG +L D Q
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM-VGNNLKDTQLQQI 117
Query: 131 --EIIASMDGDGDGAVSFEDLQLIVNSL 156
+ I + D DGDG +SFE+ +V L
Sbjct: 118 VDKTIINADKDGDGRISFEEFCAVVGGL 145
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 15 NHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLE 74
+ + L + F+ D DN GS++ E F S+ V+ ++ DT+ +G + +
Sbjct: 4 DEIKRLGKRFKKLDLDNSGSLSVEE----FMSLPELQQNPLVQRVIDIFDTDGNGEVDFK 59
Query: 75 EFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQ---- 130
EF+E ++ G L+ AF ++D D ++ EL +V++ + VG +L D Q
Sbjct: 60 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM-VGNNLKDTQLQQI 118
Query: 131 --EIIASMDGDGDGAVSFEDLQLIVNSL 156
+ I + D DGDG +SFE+ +V L
Sbjct: 119 VDKTIINADKDGDGRISFEEFCAVVGGL 146
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
L + FR +D + DG I EL + + G +E+D+ E+M+ GD NNDG + +EFLE
Sbjct: 97 LSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGN 91
DGSI+ EL + +G + E+++EM+ + D + G + +EFL M + M+ S G
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 92 L---LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 148
L F + + D + EL +++ G ++ D +E++ D + DG + +++
Sbjct: 93 SEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 149 L 149
Sbjct: 153 F 153
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED- 148
N KAAF+ L +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 149 LQLIVNSL 156
L ++V S+
Sbjct: 78 LVMMVRSM 85
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
L + FR FD + DG I EL + + G +E+D+ E+M+ GD NNDG + +E+LE
Sbjct: 97 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLE 155
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGN 91
DGSI+ EL + +G + E+++EM+ + D + G + +EFL M + M+ S G
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 92 L---LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 148
L F + + D + EL +++ G ++ D +E++ D + DG + +++
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 149 L 149
Sbjct: 153 W 153
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED- 148
N KAAF+ L +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 149 LQLIVNSL 156
L ++V S+
Sbjct: 78 LVMMVRSM 85
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDME 85
EFL M + M+
Sbjct: 65 FPEFLTMMARKMK 77
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + DGD +T EL V+ +LG + A+ Q++I +D DG+G + F +
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDME 85
EFL M + M+
Sbjct: 65 FPEFLTMMARKMK 77
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + DGD +T EL V+ +LG + A+ Q++I +D DG+G + F +
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDME 85
EFL M + M+
Sbjct: 65 FPEFLTMMARKMK 77
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + DGD +T EL V+ +LG + A+ Q++I +D DG+G + F +
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDM 84
EFL M + M
Sbjct: 65 FPEFLTMMARKM 76
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + DGD +T EL V+ +LG + A+ Q++I +D DG+G + F +
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDM 84
EFL M + M
Sbjct: 65 FPEFLTMMARKM 76
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + DGD +T EL V+ +LG + A+ Q++I +D DG+G + F +
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 23 TFRAFDSDNDGSITGAELSGIF---NSVGYRASEED---VREMMRQGDTNNDGLLSLEEF 76
FR FD DNDG IT AEL+ I N G ++ D V+ M+R D NNDG + EF
Sbjct: 127 AFRVFDVDNDGEITTAELAHILYNGNKKG-NITQRDVNRVKRMIRDVDKNNDGKIDFHEF 185
Query: 77 LEM 79
EM
Sbjct: 186 SEM 188
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 8/138 (5%)
Query: 17 VLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF 76
V L TF D D G IT +L G + + ++ Q D++ G + EF
Sbjct: 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPY-NFDLLLDQIDSDGSGKIDYTEF 109
Query: 77 LEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLAD-----CQE 131
+ +L L+ AF ++D D +T AEL ++ N ++ +
Sbjct: 110 IAAALDRKQLSK--KLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKR 167
Query: 132 IIASMDGDGDGAVSFEDL 149
+I +D + DG + F +
Sbjct: 168 MIRDVDKNNDGKIDFHEF 185
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDME 85
EFL M + M+
Sbjct: 65 FPEFLTMMARKMK 77
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + DGD +T EL V+ +LG + A+ Q++I +D DG+G + F +
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
L + FR D + DG I EL + + G +E+D+ E+M+ GD NNDG + +EFLE
Sbjct: 97 LSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGN 91
DGSI+ EL + +G + E+++EM+ + D + G + +EFL M + M+ S G
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 92 L---LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 148
L F + + D + EL +++ G ++ D +E++ D + DG + +++
Sbjct: 93 SEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 149 L 149
Sbjct: 153 F 153
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED- 148
N KAAF+ L +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 149 LQLIVNSL 156
L ++V S+
Sbjct: 78 LVMMVRSM 85
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
L + FR FD + DG I EL + + G +E+D+ E+M+ GD NNDG + +E LE
Sbjct: 97 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLE 155
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGN 91
DGSI+ EL + +G + E+++EM+ + D + G + +EFL M + M+ S G
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 92 L---LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFE 147
L F + + D + EL +++ G ++ D +E++ D + DG + ++
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED- 148
N KAAF+ L +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 149 LQLIVNSL 156
L ++V S+
Sbjct: 78 LVMMVRSM 85
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E F+ D+DN G+IT EL VG E +++++M D + G + EF+
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 80 NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGD 139
+L NL+ +AF + DG +T E+ + ++ GL ++I +D D
Sbjct: 72 TVHLNKLEREENLV-SAFSYFDKDGSGYITLDEIQQACKDF--GLDDIHIDDMIKEIDQD 128
Query: 140 GDGAVSF 146
DG + +
Sbjct: 129 NDGQIDY 135
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 23 TFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
FRAFD D DG IT EL +G +E++ M+R+ D + DG ++ EEF M
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
L+ AF + + DGD +T EL + LG L + +I D D DG V++E+
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 23 TFRAFDSDNDGSITGAELSGIFNSVGYRA--SEED---VREMMRQGDTNNDGLLSLEEFL 77
FR FD DNDG IT AEL+ + + R +E D V++M+R+ D N DG + EF
Sbjct: 130 AFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFS 189
Query: 78 EM 79
EM
Sbjct: 190 EM 191
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 8/138 (5%)
Query: 17 VLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF 76
V L F D + G+IT +L G + ++ Q D++ G + EF
Sbjct: 54 VQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPP-NFDLLLDQIDSDGSGNIDYTEF 112
Query: 77 LEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLAD-----CQE 131
L +L L+ AF ++D D +T AEL V+ N ++ + ++
Sbjct: 113 LAAAIDRRQLSK--KLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKK 170
Query: 132 IIASMDGDGDGAVSFEDL 149
+I +D +GDG + F +
Sbjct: 171 MIREVDKNGDGKIDFYEF 188
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEM 79
EFL M
Sbjct: 65 FPEFLTM 71
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + DGD +T EL V+ +LG + A+ Q++I +D DG+G + F +
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 73 LEEFLEM 79
EFL M
Sbjct: 66 FPEFLTM 72
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + DGD +T EL V+ +LG + A+ Q++I +D DG+G + F +
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 8 SEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNN 67
+E + L V L AF DG++ +L + +G EDV + G T+
Sbjct: 5 QDEIDDLKDVFELF----AFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---GGTHK 57
Query: 68 DG--LLSLEEFLEM--NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVG 123
G L EEFL D E G+ + ++A F++ + +G ++GAEL V+ LG
Sbjct: 58 MGEKSLPFEEFLPAYEGLMDCEQGTFADYMEA-FKTFDREGQGFISGAELRHVLTALGER 116
Query: 124 LSLADCQEIIASMD--GDGDGAVSFEDL 149
LS D EII D D +G V +ED
Sbjct: 117 LSDEDVDEIIKLTDLQEDLEGNVKYEDF 144
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNND--GLLSLEEFL 77
+E F+ FD + G I+GAEL + ++G R S+EDV E+++ D D G + E+F+
Sbjct: 86 YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
Query: 78 E 78
+
Sbjct: 146 K 146
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F +D D DG+IT EL + S+G +E ++++M+ + D + +G +
Sbjct: 5 TEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTID 64
Query: 73 LEEFLEMNTKDME 85
EFL M + M+
Sbjct: 65 FPEFLTMMARIMK 77
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
K AF + DGD +T EL V+ +LG+ + A+ Q++I +D DG+G + F + +
Sbjct: 12 FKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 153 VNSLL 157
+ ++
Sbjct: 72 MARIM 76
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS 72
T + E F FD DN+GSI+ +EL+ + S+G SE +V ++M + D + + +
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 73 LEEFLEMNTKDME 85
EFL + ++ ++
Sbjct: 65 FSEFLALMSRQLK 77
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + D + ++ +EL V+ +LG+ S A+ +++ +D DG+ + F +
Sbjct: 12 FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 7 LSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTN 66
LSEE ++ E F FD D DG IT EL+ + S+ +EE++++M+ + D +
Sbjct: 4 LSEE-----QIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDAD 58
Query: 67 NDGLLSLEEFLEMNTK 82
+G + +EFL + K
Sbjct: 59 GNGTIEFDEFLSLMAK 74
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + DGD +T EL VI +L + + Q++I+ +D DG+G + F++
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEF 68
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 125 SLADCQEIIASMDGDGDGAVSFEDLQLIVNSL 156
+ D +E D DGDG ++ E+L ++ SL
Sbjct: 8 QIVDFKEAFGLFDKDGDGCITVEELATVIRSL 39
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 19 SLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
+L F A D DN G+++ E+ +GY+ D+ +++R D+N G + +FL
Sbjct: 58 NLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLA 117
Query: 79 MNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLAD--CQEIIASM 136
T D + + F+ ++DG+ ++ EL + + L D ++ +
Sbjct: 118 A-TIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEV 176
Query: 137 DGDGDGAVSFEDLQLIVNS 155
D +GDG + F + L+++
Sbjct: 177 DLNGDGEIDFHEFMLMMSK 195
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 7 LSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTN 66
LSEE ++ E F FD D DG IT EL+ + S+ +EE++++M+ + D +
Sbjct: 4 LSEE-----QIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDAD 58
Query: 67 NDGLLSLEEFLEMNTKDME 85
+G + +EFL + K ++
Sbjct: 59 GNGTIEFDEFLSLMAKKVK 77
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + DGD +T EL VI +L + + Q++I+ +D DG+G + F++
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEF 68
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 125 SLADCQEIIASMDGDGDGAVSFEDLQLIVNSL 156
+ D +E D DGDG ++ E+L ++ SL
Sbjct: 8 QIVDFKEAFGLFDKDGDGCITVEELATVIRSL 39
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 16 HVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEE 75
+ E F FD D DG IT EL + S+G +E ++++M+ + D + +G + E
Sbjct: 8 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 76 FLEMNTKDME 85
FL + + M+
Sbjct: 68 FLNLMARKMK 77
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
K AF + DGD +T EL V+ +LG + A+ Q++I +D DG+G + F +
Sbjct: 12 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 17 VLSLVETFRAFDSDNDGSITGAELSGIFNSV-GYRASEEDVREMMRQGDTNNDGLLSLEE 75
V L + FR FD++ DG I+ +EL + G++ D+ E++R D N DG + EE
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 76 FLEMNTK 82
F+ M ++
Sbjct: 66 FVRMMSR 72
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENL-GVGLSLADCQEIIASMDGDGDGAVSFEDL 149
L+ AF + +GD ++ +EL E + L G + D +EII +D +GDG V FE+
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMN 80
++ D+D DG +T E++ F GY E V + + + D N DG ++LEEFL N
Sbjct: 81 YKLMDADGDGKLTKEEVTTFFKKFGY----EKVVDQIMKADANGDGYITLEEFLAFN 133
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 129 CQEIIASMDGDGDGAVSFEDLQLIVNS 155
+ + +D +GDG+VS+E+++ V+S
Sbjct: 2 AEALFKQLDANGDGSVSYEEVKAFVSS 28
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L+E FRA D+D G+I+ EL+ +S G S +++ D N+ G ++ +EF
Sbjct: 29 LMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEF--- 85
Query: 80 NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGD 139
KD+ L ++ F + GD L E+ + + G +S Q ++ D
Sbjct: 86 --KDLHHFILS--MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQ 141
Query: 140 GDGAVSFEDL 149
G++ F+D
Sbjct: 142 RRGSLGFDDY 151
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 9 EETETLNH-VLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNN 67
+E + L+H +LS+ E FR DS DG + E+ S GY+ SE+ + +MR+ D
Sbjct: 83 DEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQR 142
Query: 68 DGLLSLEEFLEMN 80
G L ++++E++
Sbjct: 143 RGSLGFDDYVELS 155
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 31/54 (57%)
Query: 97 FESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQ 150
F +++ DG ++ EL+ + + GV SLA ++++ D + G ++F++ +
Sbjct: 33 FRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFK 86
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L+ F+ FDSD G IT EL +F +E +++++ D NNDG + EEF+EM
Sbjct: 399 LLAAFQQFDSDGSGKITNEELGRLFGVT--EVDDETWHQVLQECDKNNDGEVDFEEFVEM 456
Query: 80 NTK 82
K
Sbjct: 457 MQK 459
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E F FD+D G+I EL ++G+ +E++++M+ + D + G + EEFL M
Sbjct: 32 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTM 91
Query: 80 NTKDM 84
T M
Sbjct: 92 MTAKM 96
Score = 33.1 bits (74), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 33/65 (50%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
++ AF+ + DG + EL + LG + +++I+ +D DG G + FE+ +
Sbjct: 32 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTM 91
Query: 153 VNSLL 157
+ + +
Sbjct: 92 MTAKM 96
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 20 LVETFRAFD--SDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDG--LLSLEE 75
L + F FD DG++ +L + +G EDV + G T+ G L EE
Sbjct: 11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---GGTHKMGEKSLPFEE 67
Query: 76 FLEM--NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEII 133
FL D E G+ + ++A F++ + +G ++GAEL V+ LG LS D EII
Sbjct: 68 FLPAYEGLMDCEQGTFADYMEA-FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
Query: 134 ASMD--GDGDGAVSFEDL 149
D D +G V +ED
Sbjct: 127 KLTDLQEDLEGNVKYEDF 144
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNND--GLLSLEEFL 77
+E F+ FD + G I+GAEL + ++G R S+EDV E+++ D D G + E+F+
Sbjct: 86 YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
Query: 78 E 78
+
Sbjct: 146 K 146
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 20 LVETFRAFD--SDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDG--LLSLEE 75
L + F FD DG++ +L + +G EDV + G T+ G L EE
Sbjct: 11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---GGTHKMGEKSLPFEE 67
Query: 76 FLEM--NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEII 133
FL D E G+ + ++A F++ + +G ++GAEL V+ LG LS D EII
Sbjct: 68 FLPAYEGLMDCEQGTFADYMEA-FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
Query: 134 ASMD--GDGDGAVSFEDL 149
D D +G V +ED
Sbjct: 127 KLTDLQEDLEGNVKYEDF 144
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNND--GLLSLEEFL 77
+E F+ FD + G I+GAEL + ++G R S+EDV E+++ D D G + E+F+
Sbjct: 86 YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
Query: 78 E 78
+
Sbjct: 146 K 146
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 20 LVETFRAFD--SDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDG--LLSLEE 75
L + F FD DG++ +L + +G EDV + G T+ G L EE
Sbjct: 9 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---GGTHKMGEKSLPFEE 65
Query: 76 FLEM--NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEII 133
FL D E G+ + ++A F++ + +G ++GAEL V+ LG LS D EII
Sbjct: 66 FLPAYEGLMDCEQGTFADYMEA-FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 124
Query: 134 ASMD--GDGDGAVSFEDL 149
D D +G V +ED
Sbjct: 125 KLTDLQEDLEGNVKYEDF 142
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNND--GLLSLEEFL 77
+E F+ FD + G I+GAEL + ++G R S+EDV E+++ D D G + E+F+
Sbjct: 84 YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 143
Query: 78 E 78
+
Sbjct: 144 K 144
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 20 LVETFRAFD--SDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDG--LLSLEE 75
L + F FD DG++ +L + +G EDV + G T+ G L EE
Sbjct: 8 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---GGTHKMGEKSLPFEE 64
Query: 76 FLEM--NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEII 133
FL D E G+ + ++A F++ + +G ++GAEL V+ LG LS D EII
Sbjct: 65 FLPAYEGLMDCEQGTFADYMEA-FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 123
Query: 134 ASMD--GDGDGAVSFEDL 149
D D +G V +ED
Sbjct: 124 KLTDLQEDLEGNVKYEDF 141
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNND--GLLSLEEFL 77
+E F+ FD + G I+GAEL + ++G R S+EDV E+++ D D G + E+F+
Sbjct: 83 YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 142
Query: 78 E 78
+
Sbjct: 143 K 143
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L+ F+ FDSD G IT EL +F +E +++++ D NNDG + EEF+EM
Sbjct: 125 LLAAFQQFDSDGSGKITNEELGRLFGVT--EVDDETWHQVLQECDKNNDGEVDFEEFVEM 182
Query: 80 NTK 82
K
Sbjct: 183 MQK 185
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+++ FR FD DN G+IT +L + +G +EE+++EM+ + D N+D + +EF+ +
Sbjct: 11 ILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRI 70
Query: 80 NTK 82
K
Sbjct: 71 MKK 73
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 13 TLNHVLSLVETFRAFD--SDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDG- 69
T + + + E F FD DG + A++ + +G +E V + G T G
Sbjct: 4 TKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQ---HGGTKKMGE 60
Query: 70 -LLSLEEFL----EMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGL 124
LEE L EM++KD G+ + AF++ + +G +++ AE+ V++ LG +
Sbjct: 61 KAYKLEEILPIYEEMSSKDT--GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERI 118
Query: 125 SLADCQEIIASMD--GDGDGAVSFEDL 149
+ C +I D D DG + +EDL
Sbjct: 119 TEDQCNDIFTFCDIREDIDGNIKYEDL 145
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 6 PLSEE---TETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQ 62
P+ EE +T +E F+ FD + G I+ AE+ + +G R +E+ ++
Sbjct: 70 PIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTF 129
Query: 63 GDTNND 68
D D
Sbjct: 130 CDIRED 135
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 20 LVETFRAFD--SDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDG--LLSLEE 75
L + F FD DG++ +L + +G EDV + G T+ G L EE
Sbjct: 8 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---GGTHKMGEKSLPFEE 64
Query: 76 FLEM--NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEII 133
FL D E G+ + ++A F++ + +G ++GAEL V+ LG LS D EII
Sbjct: 65 FLPAYEGLMDCEQGTFADYMEA-FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 123
Query: 134 ASMD--GDGDGAVSFEDL 149
D D +G V +ED
Sbjct: 124 KLTDLQEDLEGNVKYEDF 141
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNND--GLLSLEEFL 77
+E F+ FD + G I+GAEL + ++G R S+EDV E+++ D D G + E+F+
Sbjct: 83 YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 142
Query: 78 E 78
+
Sbjct: 143 K 143
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 15 NHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLE 74
NH+ + E F D++++GS++ E+ + SVG + + D+ +++ D N+ G ++
Sbjct: 36 NHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQALDINDRGNITYT 93
Query: 75 EFLE--MNTKDMELGSLGNLLKAAFESLNLDGDDILTGAEL 113
EF+ K++E LKAAF ++ D D ++ +++
Sbjct: 94 EFMAGCYRWKNIE----STFLKAAFNKIDKDEDGYISKSDI 130
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 42.7 bits (99), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L FR FDSDN G I+ EL+ IF E + ++ + D NNDG + +EF +M
Sbjct: 420 LERAFRMFDSDNSGKISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFDEFQQM 477
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 12 ETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLL 71
+T + F+ FD++ DG I+ +EL ++G +E VR MM + DT+ DG +
Sbjct: 5 DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDE-VRRMMAEIDTDGDGFI 63
Query: 72 SLEEFLEM 79
S +EF +
Sbjct: 64 SFDEFTDF 71
Score = 32.7 bits (73), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 97 FESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
F+ + +GD ++ +EL + ++ LG ++ + + ++A +D DGDG +SF++
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEF 68
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
F+ FD++ DG I+ AEL ++G +E V+ MM + DT+ DG +S +EF +
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGSITPDE-VKHMMAEIDTDGDGFISFQEFTDF 69
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 97 FESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
F+ + +GD ++ AEL E ++ LG ++ + + ++A +D DGDG +SF++
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMM--RQGDTNNDGLLSLEEFLEM 79
E F+ FD DG I ++ + ++G + +V +++ + D N L E+FL M
Sbjct: 11 EAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLPM 70
Query: 80 N---TKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASM 136
K+ + G + ++ + +G+ + GAE+ V+ LG ++ + ++++A
Sbjct: 71 MQTIAKNKDQGCFEDYVE-GLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGH 129
Query: 137 DGDGDGAVSFEDLQLIV 153
+ D +G +++E+L +V
Sbjct: 130 E-DSNGCINYEELVRMV 145
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
VE R FD + +G++ GAE+ + ++G + +EE+V +++ G +++G ++ EE + M
Sbjct: 86 YVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLV-AGHEDSNGCINYEELVRM 144
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMM--RQGDTNNDGLLSLEEFLEM 79
E F+ FD DG I ++ + ++G + +V +++ + D N L E+FL M
Sbjct: 13 EAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLPM 72
Query: 80 N---TKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASM 136
K+ + G + ++ + +G+ + GAE+ V+ LG ++ + ++++A
Sbjct: 73 MQTIAKNKDQGCFEDYVE-GLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGH 131
Query: 137 DGDGDGAVSFEDLQLIV 153
+ D +G +++E+L +V
Sbjct: 132 E-DSNGCINYEELVRMV 147
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
VE R FD + +G++ GAE+ + ++G + +EE+V +++ G +++G ++ EE + M
Sbjct: 88 YVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLV-AGHEDSNGCINYEELVRM 146
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 1 MAESRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMM 60
++E RP+ + L + E F+ FD D +G I+ EL S+GY +E ++ ++
Sbjct: 22 LSEQRPVDIPEDELEEIR---EAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVII 78
Query: 61 RQGDTNNDGLLSLEEFL 77
++ D + DG + EEF+
Sbjct: 79 QRLDMDGDGQVDFEEFV 95
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
++ AF+ + DG+ ++ EL + +LG + + + II +D DGDG V FE+
Sbjct: 38 IREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEF 94
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 7 LSEETETLNHVLSLVETFRAFDSD-NDGSITGAELSGIF-NSVGYRASEEDVREMMRQGD 64
L E T+ H + E ++ F D G ++ E I+ N Y + + + R D
Sbjct: 16 LLESTDFTEH--EIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFD 73
Query: 65 TNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGL 124
N DG + EF+ + G L LK AF +LDG+ ++ AE+ E+++ + +
Sbjct: 74 ANGDGTIDFREFI-IALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMV 132
Query: 125 SLA------------DCQEIIASMDGDGDGAVSFEDL 149
S ++I MD + DG +S E+
Sbjct: 133 SSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 14/72 (19%)
Query: 19 SLVETFRAFDSDNDGSITGAELSGIFNSVGYR-------------ASEEDVREMMRQGDT 65
L F +D D +G I+ AE+ I ++ Y+ E+ ++ RQ DT
Sbjct: 100 KLKWAFSMYDLDGNGYISKAEMLEIVQAI-YKMVSSVMKMPEDESTPEKRTEKIFRQMDT 158
Query: 66 NNDGLLSLEEFL 77
N DG LSLEEF+
Sbjct: 159 NRDGKLSLEEFI 170
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF-LE 78
+ E F FD +NDG + EL ++G+ + ++ +++ + D+ L+ ++F +
Sbjct: 25 IYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIV 84
Query: 79 MNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDG 138
M K ++ L +K AF+ + D ++ L V + LG L+ + + +I D
Sbjct: 85 MGEKILKRDPLDE-IKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDL 143
Query: 139 DGDGAVS 145
DGDG ++
Sbjct: 144 DGDGEIN 150
Score = 32.7 bits (73), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 23 TFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNT 81
F+ FD D+ G I+ L + +G ++E++R M+ + D + DG ++ EF+ + T
Sbjct: 101 AFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICT 159
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L FR FDSDN G I+ EL+ IF E + ++ + D NNDG + +EF +M
Sbjct: 443 LERAFRMFDSDNSGKISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFDEFQQM 500
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFL 77
E F+ FD DND +T EL + ++G +++ + E+++ D +N G E FL
Sbjct: 18 EAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFL 73
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGA 143
K AF+ + D D+ LT EL V+ LG + EI+ D D G
Sbjct: 16 YKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGK 66
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L FR FDSDN G I+ EL+ IF E + ++ + D NNDG + +EF +M
Sbjct: 444 LERAFRMFDSDNSGKISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFDEFQQM 501
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 20 LVETFRAFD--SDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDG--LLSLEE 75
L E F FD DG++ ++ + +G EDV + G T+ G L EE
Sbjct: 12 LKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAV---GGTHKMGEKSLPFEE 68
Query: 76 FLEM--NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEII 133
FL D E G+ + ++A F++ + +G ++GAEL V+ LG LS + EII
Sbjct: 69 FLPAYEGLMDCEQGTYADYMEA-FKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 127
Query: 134 --ASMDGDGDGAVSFEDL 149
+ D +G V +E+
Sbjct: 128 NLTDLQEDLEGNVKYEEF 145
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNND--GLLSLEEFL 77
+E F+ FD + G I+GAEL + + +G R S+E+V E++ D D G + EEF+
Sbjct: 87 YMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFV 146
Query: 78 E 78
+
Sbjct: 147 K 147
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 21 VETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
+E FR FD + +G + GAEL + ++G + +EE+V E + G +++G ++ E FL+
Sbjct: 90 LEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEV-ETVLAGHEDSNGCINYEAFLK 146
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLS----LEEFL 77
E F FD DG I ++ + ++G + +V +++ G+ +D L S E FL
Sbjct: 14 EAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVL--GNPKSDELKSRRVDFETFL 71
Query: 78 EM---NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIA 134
M K+ G+ + L+ F + +G+ + GAEL V+ LG ++ + + ++A
Sbjct: 72 PMLQAVAKNRGQGTYEDYLE-GFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA 130
Query: 135 SMDGDGDGAVSFE 147
+ D +G +++E
Sbjct: 131 GHE-DSNGCINYE 142
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMN 80
++ D D DG +T E++ F G E V E + + D N DG ++LEEFLE +
Sbjct: 11 YKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEFLEFS 63
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 20 LVETFRAFD--SDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDG--LLSLEE 75
L E F FD DG++ ++ + +G EDV + G T+ G L EE
Sbjct: 11 LKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAV---GGTHKMGEKSLPFEE 67
Query: 76 FLEMNT--KDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEII 133
FL D E G+ + ++A F++ + +G ++GAEL V+ LG LS + EII
Sbjct: 68 FLPAYEGLMDCEQGTYADYMEA-FKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 126
Query: 134 --ASMDGDGDGAVSFEDL 149
+ D +G V +E+
Sbjct: 127 NLTDLQEDLEGNVKYEEF 144
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNND--GLLSLEEFL 77
+E F+ FD + G I+GAEL + + +G R S+E+V E++ D D G + EEF+
Sbjct: 86 YMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFV 145
Query: 78 E 78
+
Sbjct: 146 K 146
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 41.2 bits (95), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 2 AESRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMR 61
+E ++ + +TL L FR FDSDN G I+ EL+ IF E + ++
Sbjct: 402 SEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVSD--VDSETWKSVLS 459
Query: 62 QGDTNNDGLLSLEEF 76
+ D NNDG + +EF
Sbjct: 460 EVDKNNDGEVDFDEF 474
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 20 LVETFRAFD--SDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDG--LLSLEE 75
L + F FD DG++ +L + +G EDV + G T+ G L EE
Sbjct: 11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---GGTHKMGEKSLPFEE 67
Query: 76 FLEM--NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEII 133
FL D E G+ + ++A F++ + +G ++GAEL V+ LG LS + EII
Sbjct: 68 FLPAYEGLMDCEQGTFADYMEA-FKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 126
Query: 134 --ASMDGDGDGAVSFEDL 149
+ D +G V +E+
Sbjct: 127 NLTDLQEDLEGNVKYEEF 144
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNND--GLLSLEEFL 77
+E F+ FD + G I+GAEL + + +G R S+E+V E++ D D G + EEF+
Sbjct: 86 YMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFV 145
Query: 78 E 78
+
Sbjct: 146 K 146
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMN 80
++ D D DG +T E++ F G E V E + + D N DG ++LEEFLE +
Sbjct: 81 YKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEFLEFS 133
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMN 80
++ D D DG +T E++ F G E V E + + D N DG ++LEEFLE +
Sbjct: 81 YKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEFLEFS 133
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 7 LSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTN 66
SE T ++ FR +D DN G I EL + GYR S++ ++R+ D
Sbjct: 63 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQ 122
Query: 67 NDGLLSLEEFLE 78
G ++ ++F++
Sbjct: 123 GRGQIAFDDFIQ 134
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 7 LSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTN 66
SE T ++ FR +D DN G I EL + GYR S++ ++R+ D
Sbjct: 63 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 122
Query: 67 NDGLLSLEEFLE 78
G ++ ++F++
Sbjct: 123 GRGQIAFDDFIQ 134
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 7 LSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTN 66
SE T ++ FR +D DN G I EL + GYR S++ ++R+ D
Sbjct: 82 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 141
Query: 67 NDGLLSLEEFLE 78
G ++ ++F++
Sbjct: 142 GRGQIAFDDFIQ 153
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 7 LSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTN 66
SE T ++ FR +D DN G I EL + GYR S++ ++R+ D
Sbjct: 60 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 119
Query: 67 NDGLLSLEEFLE 78
G ++ ++F++
Sbjct: 120 GRGQIAFDDFIQ 131
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 7 LSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTN 66
SE T ++ FR +D DN G I EL + GYR S++ ++R+ D
Sbjct: 59 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 118
Query: 67 NDGLLSLEEFLE 78
G ++ ++F++
Sbjct: 119 GRGQIAFDDFIQ 130
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 7 LSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTN 66
SE T ++ FR +D DN G I EL + GYR S++ ++R+ D
Sbjct: 81 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 140
Query: 67 NDGLLSLEEFLE 78
G ++ ++F++
Sbjct: 141 GRGQIAFDDFIQ 152
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L E FR FD D DG I +L ++GY +E ++ E+ +Q + N G + ++F+E+
Sbjct: 12 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 71
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 23 TFRAFDSDNDGSITGAELSGIFNSV-GYRA-SEEDVRE----MMRQGDTNNDGLLSLEEF 76
F+ D++ DG +T EL ++ Y+A S++ V+E +++ D N+DG +S EEF
Sbjct: 12 AFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEF 71
Query: 77 LEMNT 81
L N
Sbjct: 72 LNANA 76
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLAD------CQEIIASMDGDGDGAVSF 146
L+AAF+ L+ +GD +T EL + L +L+ ++I D + DG +S
Sbjct: 9 LEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISK 68
Query: 147 EDL 149
E+
Sbjct: 69 EEF 71
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 6 PLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDT 65
P E TE + E F FD+D G+I EL ++G+ +E++++ + + D
Sbjct: 21 PKPELTEEQKQ--EIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDK 78
Query: 66 NNDGLLSLEEFLEMNT-KDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGL 124
G + +FL + T K E + +LKA F+ + D ++ L V + LG L
Sbjct: 79 EGTGKXNFGDFLTVXTQKXSEKDTKEEILKA-FKLFDDDETGKISFKNLKRVAKELGENL 137
Query: 125 SLADCQEIIASMDGDGDGAVS 145
+ + QE I D DGDG VS
Sbjct: 138 TDEELQEXIDEADRDGDGEVS 158
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+++ F+ FD D G I+ L + +G ++E+++E + + D + DG +S +EFL +
Sbjct: 106 ILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFLRI 165
Query: 80 NTK 82
K
Sbjct: 166 XKK 168
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFL 77
F+ FD++ DG I+ +EL+ ++G +++E V+ MM + DT+ DG + EF+
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 61
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFL 77
F+ FD++ DG I+ +EL+ ++G +++E V+ MM + DT+ DG + EF+
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 60
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 15 NHVLSLVETFRAFDS-DNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSL 73
N V L FR F++ + G ++ ++ I +G + ++ +R+++ + D +G +
Sbjct: 10 NQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDF 69
Query: 74 EEFL---------EMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGL 124
+ F E+N + M+ L+ AF + +G+ ++ + E++ L L
Sbjct: 70 DSFKIIGARFLGEEVNPEQMQ-----QELREAFRLYDKEGNGYISTDVMREILAELDETL 124
Query: 125 SLADCQEIIASMDGDGDGAVSFEDL 149
S D +I +D DG G V FE+
Sbjct: 125 SSEDLDAMIDEIDADGSGTVDFEEF 149
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%)
Query: 4 SRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQG 63
+R L EE L E FR +D + +G I+ + I + S ED+ M+ +
Sbjct: 77 ARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEI 136
Query: 64 DTNNDGLLSLEEFLEMNT 81
D + G + EEF+ + T
Sbjct: 137 DADGSGTVDFEEFMGVMT 154
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+++ F+ FD D G I+ L + +G ++E+++EM+ + D + DG +S +EFL +
Sbjct: 13 ILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 72
Query: 80 NTK 82
K
Sbjct: 73 MKK 75
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 95 AAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLIVN 154
AF+ + D ++ L V + LG L+ + QE+I D DGDG VS ++ I+
Sbjct: 15 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 74
Query: 155 S 155
Sbjct: 75 K 75
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
F+ FD D G I+ EL +F+ E++ ++ Q D N DG + EF+EM
Sbjct: 423 FKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEM 478
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 17/152 (11%)
Query: 13 TLNHVLSLVETFRAFDSDNDG---------------SITGAELSGIFNSVGYRASEEDVR 57
TL+ L E FR D++NDG + G + + + + G E+ +
Sbjct: 326 TLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEG-STIEDQID 384
Query: 58 EMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVI 117
+M D + G + EF+ + D + ++ AF+ + DG ++ EL ++
Sbjct: 385 SLMPLLDMDGSGSIEYSEFI-ASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLF 443
Query: 118 ENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
+ + + + II +D + DG V F +
Sbjct: 444 SQADSSIQMEELESIIEQVDNNKDGEVDFNEF 475
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 19 SLVETFRAFDSDNDGSITGAELSGIFNSV----GYR--ASEEDVREMMRQGDTNNDGLLS 72
L F+ +D+D +GSI EL +F +V G + + EE + + + D NNDG L+
Sbjct: 94 KLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELT 153
Query: 73 LEEFLEMNTKDMEL 86
LEEF+ KD +L
Sbjct: 154 LEEFINGMAKDQDL 167
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+++ F+ FD D G I+ L + +G ++E+++EM+ + D + DG +S +EFL +
Sbjct: 23 ILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 82
Query: 80 NTK 82
K
Sbjct: 83 MKK 85
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 75 EFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIA 134
+FL + T+ M + AF+ + D ++ L V + LG L+ + QE+I
Sbjct: 5 DFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMID 64
Query: 135 SMDGDGDGAVSFEDLQLIVNS 155
D DGDG VS ++ I+
Sbjct: 65 EADRDGDGEVSEQEFLRIMKK 85
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 19 SLVETFRAFDSDNDGSITGAELSGIFNSV-------GYR-----ASEEDVREMMRQGDTN 66
L F +D + DG IT E+ I S+ Y A E V + D N
Sbjct: 10 KLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRN 69
Query: 67 NDGLLSLEEFLEMNTKD 83
DG++++EEFLE KD
Sbjct: 70 QDGVVTIEEFLEACQKD 86
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ E F FD +NDG + EL ++G+ + ++ +++ + D+ L ++F +
Sbjct: 25 IYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFYIV 84
Query: 80 NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGD 139
+ + + +K AF+ + D ++ L V + LG L+ + + I D D
Sbjct: 85 XGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLD 144
Query: 140 GDGAVS 145
GDG ++
Sbjct: 145 GDGEIN 150
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+ F+ FD D+ G I+ L + +G ++E++R + + D + DG ++ EF+ +
Sbjct: 98 IKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEFIAI 157
Query: 80 NT 81
T
Sbjct: 158 CT 159
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 17 VLSLVETFRAFDSDNDGSITGAELSGI----FNSVGYRASEEDVREMMRQGDTNND--GL 70
+L L FRA D + G ++ +L I N +G R E G D G
Sbjct: 28 LLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGDRIIES----FFPDGSQRVDFPGF 83
Query: 71 LS-LEEFLEMNTKDME---------LGSLGNLLKAAFESLNLDGDDILTGAELHEVIENL 120
+ L F + +D E L S N L AF+ +LD D ++ E+ +V+ L
Sbjct: 84 VRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVL-RL 142
Query: 121 GVGLSLADCQ------EIIASMDGDGDGAVSF 146
VG+ + + Q + D DGDGAVSF
Sbjct: 143 MVGVQVTEEQLENIADRTVQEADEDGDGAVSF 174
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.7 bits (86), Expect = 0.003, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
L F FD+D G IT EL+ +F SE+ +++ + D N D ++ +EF+ M
Sbjct: 437 LRRAFNLFDTDKSGKITKEELANLFGLTSI--SEKTWNDVLGEADQNKDNMIDFDEFVSM 494
Query: 80 NTK 82
K
Sbjct: 495 MHK 497
Score = 31.2 bits (69), Expect = 0.28, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSV--------GYRASEEDVREMMRQGD 64
TL L + F+ D + DG + EL +N + + EE+V ++++ D
Sbjct: 350 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVD 409
Query: 65 TNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGL 124
+ +G + EF+ + D ++ L+ AF + D +T EL + +
Sbjct: 410 FDKNGYIEYSEFISV-CMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGL--TSI 466
Query: 125 SLADCQEIIASMDGDGDGAVSFEDL 149
S +++ D + D + F++
Sbjct: 467 SEKTWNDVLGEADQNKDNMIDFDEF 491
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 86 LGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQ------EIIASMDGD 139
L S N L AF +LD DD ++ EL +V+ + VG++++D Q I D D
Sbjct: 108 LNSRSNKLHFAFRLYDLDKDDKISRDELLQVL-RMMVGVNISDEQLGSIADRTIQEADQD 166
Query: 140 GDGAVSFEDL 149
GD A+SF +
Sbjct: 167 GDSAISFTEF 176
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRA-SEEDVREMMRQGDTNNDGLLSLEEFLE 78
++ F+ FD++ DG I E I VG ++ +V E M++ D + +G++ + EF++
Sbjct: 10 ILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMD 69
Query: 79 MNTK 82
+ K
Sbjct: 70 LIKK 73
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 19 SLVETFRAFDSDNDGSITGAELSGIFNSV-------GYRASEED-----VREMMRQGDTN 66
L F +D + DG IT E+ I S+ Y ED V ++ D N
Sbjct: 166 KLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRN 225
Query: 67 NDGLLSLEEFLEMNTKD 83
DG+++++EFLE KD
Sbjct: 226 QDGVVTIDEFLETCQKD 242
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 6 PLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDT 65
P E TE + E F FD+D G+I EL ++G+ +E++++M+ + D
Sbjct: 21 PKPELTEEQKQ--EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDK 78
Query: 66 NNDGLLSLEEFLEMNTKDM 84
G ++ +FL + T+ M
Sbjct: 79 EGTGKMNFGDFLTVMTQKM 97
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/65 (21%), Positives = 32/65 (49%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
++ AF+ + DG + EL + LG + +++I+ +D +G G ++F D +
Sbjct: 33 IREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTV 92
Query: 153 VNSLL 157
+ +
Sbjct: 93 MTQKM 97
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 11 TETLNHVLSLVETFRAFDSDNDGSITGAELS-GIFNSVGYRASEEDVREMMRQGDTNNDG 69
T L+ + + F D D G++ EL G F G R S + MMR DT+ +G
Sbjct: 44 TIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPG-GIRLSPQTALRMMRIFDTDFNG 102
Query: 70 LLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAE 112
+S EF+ M K MEL ++ A S L+ +IL +
Sbjct: 103 HISFYEFMAM-YKFMELAYNLFVMNARARSGTLEPHEILPALQ 144
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 55 DVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELH 114
++++M+ + D + +G + EFL M + M+ ++ AF + DG+ ++ AEL
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 115 EVIENLG 121
V+ NLG
Sbjct: 62 HVMTNLG 68
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVG 48
+ E FR FD D +G I+ AEL + ++G
Sbjct: 40 IREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 17 VLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF 76
+ L FR D D S+ E +G + + + R+ D N G L LEEF
Sbjct: 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 77 LEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVI 117
L M ++ AAF L+ GD ++T +L V
Sbjct: 96 LRALRPPMSQAREA-VIAAAFAKLDRSGDGVVTVDDLRGVY 135
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 97 FESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
F L+ DG L E + + LG+ L A+ + + D +G G + E+
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
V+ F+ FD D G I EL + S+G + S E++ E+++ G DG+++ +F++M
Sbjct: 78 FVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLK-GVPVKDGMVNYHDFVQM 136
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMM--RQGDTNNDGLLSLEEFLEM 79
E F FD D IT +++ I ++G + ++ +++ + N ++ EEFL M
Sbjct: 10 EAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPM 69
Query: 80 -----NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIA 134
N KD G+ + ++ + +G+ + GAEL V+ LG ++ + +E++
Sbjct: 70 LQAAANNKDQ--GTFEDFVE-GLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK 126
Query: 135 SMDGDGDGAVSFE 147
+ D +G +++E
Sbjct: 127 GQE-DSNGCINYE 138
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
VE R FD + +G++ GAEL + ++G + +EE+V E+M+ G +++G ++ E F++
Sbjct: 85 FVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFVK 142
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMM--RQGDTNNDGLLSLEEFLEM 79
E F FD D IT +++ I ++G + ++ +++ + N ++ EEFL M
Sbjct: 12 EAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPM 71
Query: 80 -----NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIA 134
N KD G+ + ++ + +G+ + GAEL V+ LG ++ + +E++
Sbjct: 72 LQAAANNKDQ--GTFEDFVE-GLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK 128
Query: 135 SMDGDGDGAVSFE 147
+ D +G +++E
Sbjct: 129 GQE-DSNGCINYE 140
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
VE R FD + +G++ GAEL + ++G + +EE+V E+M+ G +++G ++ E F++
Sbjct: 87 FVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFVK 144
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFL 77
L E F+ D+DN G+IT EL VG E +++++M D + G + EF+
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFI 82
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF 76
L E FR D + G I L I S+G +E+++ M+ + DT+ G + EEF
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
LK AF L+ + ++ L ++++LG L+ + + +IA D DG G V +E+ + +
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKCL 68
Query: 153 VNS 155
+ S
Sbjct: 69 MMS 71
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 7 LSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTN 66
SE T ++ FR +D DN G I EL + GYR S++ ++R+ D
Sbjct: 60 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQ 117
Query: 67 NDGLLSLEEFLE 78
G ++ ++F++
Sbjct: 118 GRGQIAFDDFIQ 129
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 16 HVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEE 75
+ L E F D D DG I +L +F+S+G ++++ M+++ G L+
Sbjct: 14 QMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTA 69
Query: 76 FLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
FL + + + + L+ AF + DG + L +++EN+G S + + +
Sbjct: 70 FLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNV 126
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 19 SLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
L F+ FD D +G I+ EL+ +F + + S+ +EM+ D+NNDG + EEF +
Sbjct: 427 KLESAFQKFDQDGNGKISVDELASVFG-LDHLESK-TWKEMISGIDSNNDGDVDFEEFCK 484
Query: 79 MNTK 82
M K
Sbjct: 485 MIQK 488
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 17/148 (11%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVG--------YRASEEDVREMMRQGDTNNDGLL 71
L + FR D + DG + EL ++ + E +V ++ D + +G +
Sbjct: 348 LTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYI 407
Query: 72 SLEEFLEMNTKDMELGSL--GNLLKAAFESLNLDGDDILTGAELHEVIENLGV-GLSLAD 128
EF+ T M+ SL + L++AF+ + DG+ ++ EL V G+ L
Sbjct: 408 DYSEFV---TVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV---FGLDHLESKT 461
Query: 129 CQEIIASMDGDGDGAVSFEDLQLIVNSL 156
+E+I+ +D + DG V FE+ ++ L
Sbjct: 462 WKEMISGIDSNNDGDVDFEEFCKMIQKL 489
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 86 LGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQ------EIIASMDGD 139
L S N L AF +LD D+ ++ EL +V+ + VG++++D Q I D D
Sbjct: 108 LNSRSNKLHFAFRLYDLDKDEKISRDELLQVL-RMMVGVNISDEQLGSIADRTIQEADQD 166
Query: 140 GDGAVSFEDL 149
GD A+SF +
Sbjct: 167 GDSAISFTEF 176
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 19 SLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
L F+ FD D +G I+ EL+ +F + + S+ +EM+ D+NNDG + EEF +
Sbjct: 144 KLESAFQKFDQDGNGKISVDELASVF-GLDHLESKT-WKEMISGIDSNNDGDVDFEEFCK 201
Query: 79 MNTK 82
M K
Sbjct: 202 MIQK 205
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
Query: 1 MAESRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVG--------YRAS 52
MA EET+ L + FR D + DG + EL ++ +
Sbjct: 52 MASKLTSQEETKELTDI------FRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQI 105
Query: 53 EEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELGSL--GNLLKAAFESLNLDGDDILTG 110
E +V ++ D + +G + EF+ T M+ SL + L++AF+ + DG+ ++
Sbjct: 106 ESEVDAILGAADFDRNGYIDYSEFV---TVAMDRKSLLSKDKLESAFQKFDQDGNGKISV 162
Query: 111 AELHEVIENLGV-GLSLADCQEIIASMDGDGDGAVSFEDLQLIVNSL 156
EL V G+ L +E+I+ +D + DG V FE+ ++ L
Sbjct: 163 DELASV---FGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKL 206
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 7 LSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTN 66
LSEE + + E F FD++ GSI EL ++G+ + ++ E+M + D
Sbjct: 1 LSEEQKQ-----EIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDRE 55
Query: 67 NDGLLSLEEFLEMNTKDME 85
+G + ++FL++ T+ ++
Sbjct: 56 GNGYIGFDDFLDIMTEKIK 74
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 11 TETLNHVLSLVETFRAFDSDNDGSITGAELS-GIFNSVGYRASEEDVREMMRQGDTNNDG 69
T L+ + + F D D G++ EL G F G R S + MMR DT+ +G
Sbjct: 44 TIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPG-GIRLSPQTALRMMRIFDTDFNG 102
Query: 70 LLSLEEFLEMNTKDMELG 87
+S EF+ M K MEL
Sbjct: 103 HISFYEFMAM-YKFMELA 119
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
VE R FD + +G++ GAEL + ++G + +EE+V E+M+ G +++G ++ E F++
Sbjct: 83 FVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFVK 140
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMM--RQGDTNNDGLLSLEEFLEM 79
E F FD D IT +++ I ++G + ++ +++ + N ++ EEFL M
Sbjct: 8 EAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFEEFLPM 67
Query: 80 -----NTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIA 134
N KD G+ + ++ + +G+ + GAEL V+ LG ++ + +E++
Sbjct: 68 LQAAANNKDQ--GTFEDFVE-GLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK 124
Query: 135 SMDGDGDGAVSFE 147
+ D +G +++E
Sbjct: 125 GQE-DSNGCINYE 136
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 12/72 (16%)
Query: 24 FRAFDSDNDGSITGAEL----SGIFNSVG---YRASEED-----VREMMRQGDTNNDGLL 71
F +D + DG IT E+ I++ +G Y +ED V ++ D N DG++
Sbjct: 144 FNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVV 203
Query: 72 SLEEFLEMNTKD 83
+++EF+E KD
Sbjct: 204 TIDEFIESCQKD 215
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 19 SLVETFRAFDSDNDGSITGAELSGIFNSVGYR-------------ASEEDVREMMRQGDT 65
L+ F+ +D DN+G I+ E+ I +++ Y+ E+ V ++ D
Sbjct: 100 KLIWAFQLYDLDNNGLISYDEMLRIVDAI-YKMVGSMVKLPEDEDTPEKRVNKIFNMMDK 158
Query: 66 NNDGLLSLEEFLEMNTKDMELGS 88
N DG L+LEEF E + +D + S
Sbjct: 159 NKDGQLTLEEFCEGSKRDPTIVS 181
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 14 LNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSL 73
N++ ++ FD+D G+I +EL G F + G+ +E ++R+ ++ G +
Sbjct: 84 WNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRY-SDESGNMDF 142
Query: 74 EEFLEMNTKDMELGSLGNLLKAAFESLNLDG 104
+ F+ L L + + AF+SL+ DG
Sbjct: 143 DNFISC------LVRLDAMFR-AFKSLDKDG 166
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 123 GLSLADCQEIIASMDGDGDGAVSFEDLQLIVNSL 156
G + C+ ++A MD D G + FE+ + + N++
Sbjct: 54 GFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI 87
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDME 85
DGSI+ EL + +G + E+++EM+ + D + G + +EFL M + M+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK 86
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED- 148
N KAAF+ L +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 149 LQLIVNSL 156
L ++V S+
Sbjct: 78 LVMMVRSM 85
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDME 85
DGSI+ EL + +G + E+++EM+ + D + G + +EFL M + M+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK 86
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED- 148
N KAAF+ L +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 149 LQLIVNSL 156
L ++V S+
Sbjct: 78 LVMMVRSM 85
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDME 85
DGSI+ EL + +G + E+++EM+ + D + G + +EFL M + M+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK 86
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED- 148
N KAAF+ L +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 149 LQLIVNSL 156
L ++V S+
Sbjct: 78 LVMMVRSM 85
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
N KAAF+ D +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDME 85
DG I+ EL + +G + E+++EM+ + D + G + +EFL M + M+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMK 86
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 51 ASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+EED+ ++M+ D NNDG + +EFL+M
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKM 30
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
N KAAF+ D +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDME 85
DG I+ EL + +G + E+++EM+ + D + G + +EFL M + M+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMK 86
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
KAAF+ + DG ++ EL V+ LG + + II +D DG G + FE+ ++
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVM 81
Query: 153 V 153
+
Sbjct: 82 M 82
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 64 DTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLG-- 121
D N DG + EF++ + G+L L+ AF+ +LD D +T E+ ++++ +
Sbjct: 73 DENKDGRIEFSEFIQALSV-TSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQM 131
Query: 122 VGLSLADCQE----------IIASMDGDGDGAVSFEDLQ 150
VG ++ +E I A MD + DG ++ ++ Q
Sbjct: 132 VGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQ 170
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 19 SLVETFRAFDSDNDGSITGAEL----SGIFNSVGY--------RASEEDVREMMRQGDTN 66
L F+ +D DNDG IT E+ I+ VG E+ V + D N
Sbjct: 100 KLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKN 159
Query: 67 NDGLLSLEEFLEMNTKD 83
DG L+L+EF E + D
Sbjct: 160 ADGKLTLQEFQEGSKAD 176
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
F FD + DG I +E + +E +R + D +NDG ++ E L++
Sbjct: 69 FNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDI 124
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFL 77
FRA D++ D +I+ E F +G + DTNNDGLLSLEEF+
Sbjct: 100 FRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPAS--FDAIDTNNDGLLSLEEFV 151
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 23/146 (15%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNS------VGYRASEEDV----REMMRQG-----D 64
+ F FD D +G I ++ SG + V R+ E + QG D
Sbjct: 6 IAARFTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAGIAD 65
Query: 65 TNNDGLLSLEEFL-----EMNTKDMELGSLGN-LLKAAFESLNLDGDDILTGAELHEVIE 118
+ D ++ EEF+ + K + L AA + DGD +T A+ +
Sbjct: 66 RDGDQRITREEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVTVADTARALT 125
Query: 119 NLGVGLSLADCQEIIASMDGDGDGAV 144
GV LA ++ A++D DGDG V
Sbjct: 126 AFGVPEDLA--RQAAAALDTDGDGKV 149
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 23/146 (15%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNS------VGYRASEEDV----REMMRQG-----D 64
+ F FD D +G I ++ SG + V R+ E + QG D
Sbjct: 6 IAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIAD 65
Query: 65 TNNDGLLSLEEFL-----EMNTKDMELGSLGN-LLKAAFESLNLDGDDILTGAELHEVIE 118
+ D ++ EEF+ + K + L AA + DGD +T A+ +
Sbjct: 66 RDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALT 125
Query: 119 NLGVGLSLADCQEIIASMDGDGDGAV 144
GV LA ++ A++D DGDG V
Sbjct: 126 AFGVPEDLA--RQAAAALDTDGDGKV 149
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 33.5 bits (75), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNT 81
+ F +FD+D G++ EL ++G+R S + V + ++ TN G ++ ++++
Sbjct: 107 QHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTN--GKITFDDYIACCV 164
Query: 82 K 82
K
Sbjct: 165 K 165
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
N KAAF+ L +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
Query: 150 QLIVNSLL 157
+++ +
Sbjct: 78 LVMMARCM 85
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDME 85
DG I+ EL + +G + E+++EM+ + D + G + +E+L M + M+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMARCMK 86
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 22 ETFRAFDSDNDGSITGAELSGI---FNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
E F D D G I EL G+ F++ G ++ + + ++ GD+++DG + +EF +
Sbjct: 45 EVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAK 104
Query: 79 M 79
M
Sbjct: 105 M 105
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
N KAAF+ L +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDME 85
DG I+ EL + +G + E+++EM+ + D + G + +EFL M + M+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMK 86
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 33.1 bits (74), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
N KAAF+ L +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDME 85
DG I+ EL + +G + E+++EM+ + D + G + +E+L M + M+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMVRCMK 86
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 33.1 bits (74), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 19 SLVETFRAFDSDNDGSITGAELSGIFNSVGYRA---------SEEDVREMMRQGDTNNDG 69
L F+ +D D +G I EL I ++ RA +EE + + D N DG
Sbjct: 89 KLRWYFKLYDVDGNGCIDRGELLNIIKAI--RAINRCNEAMTAEEFTNMVFDKIDINGDG 146
Query: 70 LLSLEEFLEMNTKD 83
LSLEEF+E KD
Sbjct: 147 ELSLEEFMEGVQKD 160
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 33.1 bits (74), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 19 SLVETFRAFDSDNDGSITGAEL----SGIFNSVG---YRASEEDVRE-----MMRQGDTN 66
L TF +D + DG I E+ I++ +G Y +ED ++ D N
Sbjct: 93 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 152
Query: 67 NDGLLSLEEFLEMNTKD 83
DG+++L+EFLE +D
Sbjct: 153 KDGIVTLDEFLESXQED 169
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 33.1 bits (74), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 21/89 (23%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYR------------------ASEE 54
TL H L TF+ +D D +G I EL I S+ Y+ EE
Sbjct: 92 TLEHKLKW--TFKIYDKDRNGCIDRQELLDIVESI-YKLKKACSVEVEAEQQGKLLTPEE 148
Query: 55 DVREMMRQGDTNNDGLLSLEEFLEMNTKD 83
V + D N DG LSL EF+E +D
Sbjct: 149 VVDRIFLLVDENGDGQLSLNEFVEGARRD 177
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
FRAFD++ D +I E N V E ++ + D + +G + +E L++
Sbjct: 65 FRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDI 120
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 19 SLVETFRAFDSDNDGSITGAEL----SGIFNSVG---YRASEED-----VREMMRQGDTN 66
L TF +D + DG I E+ I++ +G Y +ED V ++ D N
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 149
Query: 67 NDGLLSLEEFLE 78
DG+++L+EFLE
Sbjct: 150 KDGIVTLDEFLE 161
>pdb|2SAS|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Amphioxus Refined At 2.4 Angstroms Resolution
Length = 185
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 17/125 (13%)
Query: 31 NDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMEL---- 86
N GS++ A+ + S+ E++ R++ + D N D ++S EE+L M K +
Sbjct: 42 NKGSLSDADYKSMQASL-----EDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSV 96
Query: 87 ----GSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDG 142
N + F+ +++ GD I+ E +N L AD + + DG G
Sbjct: 97 ADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF--QLQCADVPAVYNVI-TDG-G 152
Query: 143 AVSFE 147
V+F+
Sbjct: 153 KVTFD 157
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 25/111 (22%)
Query: 64 DTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESL---------------NLDGDDIL 108
D N+DG + +F +M T+ E+ G+L A ++S+ +++ DD++
Sbjct: 19 DMNHDGSIQDNDFEDMMTRYKEVNK-GSLSDADYKSMQASLEDEWRDLKGRADINKDDVV 77
Query: 109 TGAELHEVIEN-LGVGLSLAD----CQEIIA----SMDGDGDGAVSFEDLQ 150
+ E + E + S+AD CQ I MD GDG V E+ Q
Sbjct: 78 SWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQ 128
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query: 19 SLVETFRAFDSDNDGSITGAEL----SGIFNSVG---YRASEEDVRE-----MMRQGDTN 66
L TF +D + DG I E+ I++ +G Y +ED ++ D N
Sbjct: 126 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 185
Query: 67 NDGLLSLEEFLE 78
DG+++L+EFLE
Sbjct: 186 KDGIVTLDEFLE 197
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 32.7 bits (73), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 33 GSITGAELSGIFNSVGYRA-SEEDVREMMRQGDTNNDGLLSLEEF---LEMNTKDMELGS 88
G IT E I++ A + + + R D N+DG L +E+ L M + G
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTS----AGK 96
Query: 89 LGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
L+ AF ++DG+ ++ E+ E++ + +S D + +
Sbjct: 97 TNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 140
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 32.7 bits (73), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 33 GSITGAELSGIFNSVGYRA-SEEDVREMMRQGDTNNDGLLSLEEF---LEMNTKDMELGS 88
G IT E I++ A + + + R D N+DG L +E+ L M + G
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTS----AGK 96
Query: 89 LGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
L+ AF ++DG+ ++ E+ E++ + +S D + +
Sbjct: 97 TNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 140
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
KAAF+ + DG ++ EL V+ LG + + II +D DG G + FE+ ++
Sbjct: 11 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 70
Query: 153 V 153
+
Sbjct: 71 M 71
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 32.7 bits (73), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 22 ETFRAFDSDNDGSITGAELSGI---FNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF 76
+ F D D DG I EL I F+S S ++ + +M GD + DG + +EEF
Sbjct: 45 KVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 32.7 bits (73), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
KAAF+ + DG ++ EL V+ LG + + II +D DG G + FE+ ++
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 153 V 153
+
Sbjct: 82 M 82
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 32.7 bits (73), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 33 GSITGAELSGIFNSVGYRA-SEEDVREMMRQGDTNNDGLLSLEEF---LEMNTKDMELGS 88
G IT E I++ A + + + R D N+DG L +E+ L M + G
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTS----AGK 96
Query: 89 LGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
L+ AF ++DG+ ++ E+ E++ + +S D + +
Sbjct: 97 TNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 140
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 33 GSITGAELSGIFNSVGYRA-SEEDVREMMRQGDTNNDGLLSLEEF---LEMNTKDMELGS 88
G IT E I++ A + + + R D N+DG L +E+ L M + G
Sbjct: 42 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTS----AGK 97
Query: 89 LGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEI 132
L+ AF ++DG+ ++ E+ E++ + +S D + +
Sbjct: 98 TNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 141
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 32 DGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDME 85
DG I+ EL + +G + E+++EM+ + D + G + +EFL M + M+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMK 86
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 91 NLLKAAFESLNLDGDD-ILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
N KAAF+ +D ++ EL +V+ LG + + QE+I +D DG G V F++
Sbjct: 18 NEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 14 LNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSL 73
N++ ++ FD D G+I +EL G F + G+ +E + M+ + ++ G +
Sbjct: 73 WNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEH-LYSMIIRRYSDEGGNMDF 131
Query: 74 EEFLEMNTKDMELGSLGNLLKAAFESLNLDG 104
+ F+ L L + + AF+SL+ DG
Sbjct: 132 DNFISC------LVRLDAMFR-AFKSLDKDG 155
Score = 29.6 bits (65), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 123 GLSLADCQEIIASMDGDGDGAVSFEDLQLIVNSL 156
G + C+ ++A MD D G + FE+ + + N++
Sbjct: 43 GFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI 76
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVG-----YRASEEDVREM----MRQGDTNNDGLLSLE 74
FR FD D+DG++ +LS + N + R S +++++ + + D + DG ++L
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 163
Query: 75 EFLEMNTKDMELGS 88
EF + ++ + S
Sbjct: 164 EFQHVISRSPDFAS 177
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 15/125 (12%)
Query: 11 TETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASE--------EDVREMMRQ 62
+ L ++T+R +D+D+ G I EL + +A++ E M++
Sbjct: 96 CQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKL 155
Query: 63 GDTNNDGLLSLEEFLEMNT-------KDMELGSLGNLLKAAFESLNLDGDDILTGAELHE 115
D+NNDG L L E + K + G AFE + DG+ + EL
Sbjct: 156 FDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDA 215
Query: 116 VIENL 120
++++L
Sbjct: 216 LLKDL 220
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 93 LKAAFESLNL-DGD-DILTGAELHEVIENLGVGL--SLADCQEIIASMDGDGDGAVSFED 148
+K AFE +GD + ++ EL V++ LG L ++ E+I +D +GDG VSFE+
Sbjct: 7 IKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEE 66
Query: 149 LQLIVNSL 156
+++ +
Sbjct: 67 FLVMMKKI 74
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGYR--ASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
E F A + D + I+ EL + ++G + EM+ + D N DG +S EEFL M
Sbjct: 12 EVFAAKEGDPN-QISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVM 70
Query: 80 NTK 82
K
Sbjct: 71 MKK 73
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query: 19 SLVETFRAFDSDNDGSITGAEL----SGIFNSVG---YRASEED-----VREMMRQGDTN 66
L TF +D + DG I E+ I++ +G Y ED V ++ D N
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKN 149
Query: 67 NDGLLSLEEFLE 78
DG+++L+EFLE
Sbjct: 150 KDGIVTLDEFLE 161
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVG-----YRASEEDVREM----MRQGDTNNDGLLSLE 74
FR FD D+DG++ +LS + N + R S +++++ + + D + DG ++L
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 194
Query: 75 EFLEMNTKDMELGS 88
EF + ++ + S
Sbjct: 195 EFQHVISRSPDFAS 208
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 24 FRAFDSDNDGSITGAELSGI---FNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
FR D+D G + G EL F S +E + + +M D + DG + +EF EM
Sbjct: 47 FRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEM 105
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGY-RASEEDVREMMRQGDTNNDGLLSLEEFLEMN 80
E F D + DG I +L F ++G E++ M+++ G ++ FL M
Sbjct: 11 EAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEAS----GPINFTVFLTMF 66
Query: 81 TKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDG 140
+ ++ +++ AF+ L+ DG + + L E++ G + + + + A+ D
Sbjct: 67 GEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDV 126
Query: 141 DGAVSFEDLQLIV 153
G V ++++ ++
Sbjct: 127 AGNVDYKNICYVI 139
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 8 SEETETLNHVLSLVETFRAFDSDNDGSIT--GAELSGIFNS--VGYRASEED---VREMM 60
S TET + SL+ F+ + + S+T E N+ + +++D + MM
Sbjct: 1 SRPTETERCIESLIAVFQKYAGKDGHSVTLSKTEFLSFMNTELAAFTKNQKDPGVLDRMM 60
Query: 61 RQGDTNNDGLLSLEEFLEM 79
++ D N+DG L +EFL +
Sbjct: 61 KKLDLNSDGQLDFQEFLNL 79
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 28 DSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTKDMELG 87
D + DG I E + ++G S+ + E Q DTN +G LSL+E L +D G
Sbjct: 112 DKNADGQINADEFAAWLTALGM--SKAEAAEAFNQVDTNGNGELSLDELLTA-VRDFHFG 168
Query: 88 SL 89
L
Sbjct: 169 RL 170
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGY-RASEEDVREMMRQGDTNNDGLLSLEEFLEMN 80
E F D + DG I +L F ++G E++ M+++ G ++ FL M
Sbjct: 29 EAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEAS----GPINFTVFLTMF 84
Query: 81 TKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDG 140
+ ++ +++ AF+ L+ DG + + L E++ G + + + + A+ D
Sbjct: 85 GEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDV 144
Query: 141 DGAVSFEDLQLIV 153
G V ++++ ++
Sbjct: 145 AGNVDYKNICYVI 157
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEE 75
F FD D G+IT E G SEED + + D +N G L ++E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDE 170
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEE 75
F FD D G+IT E G S+ED R D +N G L ++E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEE 75
F FD D G+IT E G S+ED R D +N G L ++E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEE 75
F FD D G+IT E G S+ED R D +N G L ++E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 93 LKAAFESLNLDGD----DILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 148
LK FE + +GD L +L G+S D E+ +D +GDG VSFE+
Sbjct: 7 LKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMSTLD--ELFEELDKNGDGEVSFEE 64
Query: 149 LQLIVNSL 156
Q++V +
Sbjct: 65 FQVLVKKI 72
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNT 81
+ F +FDSD G++ EL ++G+R + + V + ++ T+ G ++ ++++
Sbjct: 76 QHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTS--GKITFDDYIACCV 133
Query: 82 K 82
K
Sbjct: 134 K 134
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/139 (18%), Positives = 61/139 (43%), Gaps = 5/139 (3%)
Query: 16 HVLSLVETFRAFDSDNDGSITGAELSGIFNSVGY-RASEEDVREMMRQGDTNNDGLLSLE 74
+ E F D + DG I +L F ++G E++ M+++ G ++
Sbjct: 10 QIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEAS----GPINFT 65
Query: 75 EFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIA 134
FL M + ++ +++ AF+ L+ DG + + L E++ + + + + A
Sbjct: 66 VFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWA 125
Query: 135 SMDGDGDGAVSFEDLQLIV 153
+ D G V ++++ ++
Sbjct: 126 AFPPDVAGNVDYKNICYVI 144
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 13 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMM 60
T + V E F+ D D DG I+ ++ F+S+G +E+++ M+
Sbjct: 52 TQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMV 99
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEM 79
+V F FD + DG L + G + S+++V + + + + +GL+ +++F ++
Sbjct: 128 IVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQI 186
Query: 80 NTK 82
TK
Sbjct: 187 LTK 189
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 6 PLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDT 65
P + NH+ F FD DN+G I E + ++ EE + D
Sbjct: 57 PFGSPEDFANHL------FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDL 110
Query: 66 NNDGLLSLEEFLEM 79
N+DG ++ +E L +
Sbjct: 111 NHDGYITFDEMLTI 124
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 14/73 (19%)
Query: 19 SLVETFRAFDSDNDGSITGAELSGIFNSVGYR-------------ASEEDVREMMRQGDT 65
L F +D ++DG IT E+ I SV Y+ E V+++ + D
Sbjct: 100 KLSWAFELYDLNHDGYITFDEMLTIVASV-YKMMGSMVTLNEDEATPEMRVKKIFKLMDK 158
Query: 66 NNDGLLSLEEFLE 78
N DG ++L+EF E
Sbjct: 159 NEDGYITLDEFRE 171
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 123 GLSLADCQEIIASMDGDGDGAVSFEDLQLIVNSL 156
G+S D E+ +D +GDG VSFE+ Q++V +
Sbjct: 42 GMSTLD--ELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNT 81
+ F + D+D G++ EL ++G+R S + V + ++ TN G ++ ++++
Sbjct: 107 QHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTN--GKITFDDYIACCV 164
Query: 82 K 82
K
Sbjct: 165 K 165
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 123 GLSLADCQEIIASMDGDGDGAVSFEDLQLIVNSL 156
G+S D E+ +D +GDG VSFE+ Q++V +
Sbjct: 46 GMSTLD--ELFEELDKNGDGEVSFEEFQVLVKKI 77
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 123 GLSLADCQEIIASMDGDGDGAVSFEDLQLIVNSL 156
G+S D E+ +D +GDG VSFE+ Q++V +
Sbjct: 43 GMSTLD--ELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 30.4 bits (67), Expect = 0.39, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 38/85 (44%)
Query: 23 TFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLEMNTK 82
+F FD G + + S+GY E + +M D N G+++ + F++ ++
Sbjct: 730 SFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSR 789
Query: 83 DMELGSLGNLLKAAFESLNLDGDDI 107
+ + + A+F+ L D + I
Sbjct: 790 ETADTDTADQVMASFKILAGDKNYI 814
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEE 75
F FD D G+IT E G S+ED R D +N G L ++E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 170
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 123 GLSLADCQEIIASMDGDGDGAVSFEDLQLIVNSL 156
G+S D E+ +D +GDG VSFE+ Q++V +
Sbjct: 42 GMSTLD--ELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 123 GLSLADCQEIIASMDGDGDGAVSFEDLQLIVNSL 156
G+S D E+ +D +GDG VSFE+ Q++V +
Sbjct: 43 GMSTLD--ELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 30.4 bits (67), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 57 REMMRQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEV 116
+ + + D N DG LSL+EF E+ + +++K FE +++DG+ L E
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVK-FFEEIDVDGNGELNADEFTSC 62
Query: 117 IENL 120
IE +
Sbjct: 63 IEKM 66
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 131 EIIASMDGDGDGAVSFEDLQLIVNSL 156
E+ +D +GDG VSFE+ Q++V +
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 131 EIIASMDGDGDGAVSFEDLQLIVNSL 156
E+ +D +GDG VSFE+ Q++V +
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDLQLI 152
KAAF+ + DG ++ L V+ LG + + II +D DG G + FE+ ++
Sbjct: 22 FKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 153 V 153
+
Sbjct: 82 M 82
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 100 LNLDGDDI-LTGAELHEVIENLGV--------GLSLADCQEIIASMDGDGDGAVSFEDLQ 150
+ L GDD+ ++ EL ++ + G + C+ ++A MD D G + FE+ +
Sbjct: 22 VQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFK 81
Query: 151 LIVNSL 156
+ N++
Sbjct: 82 YLWNNI 87
Score = 29.6 bits (65), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 14 LNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQ 62
N++ ++ FD+D G+I EL G F + G+ ++ ++R+
Sbjct: 84 WNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRR 132
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 22 ETFRAFDSDNDGSITGAELSGI---FNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF 76
+ F D D G I EL I F+S S ++ + +M GD + DG + +EEF
Sbjct: 9 KVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 66
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 100 LNLDGDDI-LTGAELHEVIENLGV--------GLSLADCQEIIASMDGDGDGAVSFEDLQ 150
+ L GDD+ ++ EL ++ + G + C+ ++A MD D G + FE+ +
Sbjct: 738 VQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFK 797
Query: 151 LIVNSL 156
+ N++
Sbjct: 798 YLWNNI 803
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 14 LNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQ 62
N++ ++ F++D G+I EL G F + G+ ++ ++R+
Sbjct: 800 WNNIKKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRR 848
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 22 ETFRAFDSDNDGSITGAELSGI---FNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF 76
+ F D D G I EL I F+S S ++ + +M GD + DG + +EEF
Sbjct: 45 KVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 22 ETFRAFDSDNDGSITGAELSGI---FNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF 76
+ F D D G I EL I F+S S ++ + +M GD + DG + +EEF
Sbjct: 45 KVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 100 LNLDGDDI-LTGAELHEVIENLGV--------GLSLADCQEIIASMDGDGDGAVSFEDLQ 150
+ L GDD+ ++ EL ++ + G + C+ ++A MD D G + FE+ +
Sbjct: 11 VQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFK 70
Query: 151 LIVNSL 156
+ N++
Sbjct: 71 YLWNNI 76
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 14 LNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQ 62
N++ ++ FD+D G+I EL G F + G+ ++ ++R+
Sbjct: 73 WNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRR 121
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 131 EIIASMDGDGDGAVSFEDLQLIVNSL 156
E+ +D +GDG VSFE+ Q++V +
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 100 LNLDGDDI-LTGAELHEVIENLGV--------GLSLADCQEIIASMDGDGDGAVSFEDLQ 150
+ L GDD+ ++ EL ++ + G + C+ ++A MD D G + FE+ +
Sbjct: 18 VQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFK 77
Query: 151 LIVNSL 156
+ N++
Sbjct: 78 YLWNNI 83
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 14 LNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQ 62
N++ ++ FD+D G+I EL G F + G+ ++ ++R+
Sbjct: 80 WNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRR 128
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 131 EIIASMDGDGDGAVSFEDLQLIVNSL 156
E+ +D +GDG VSFE+ Q++V +
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 20 LVETFRAFDSDNDGSITGAELSGI---FNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF 76
+ + FR D+D G + EL F S +E + + +M D + DG + EEF
Sbjct: 44 VKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEF 103
Query: 77 LEM 79
EM
Sbjct: 104 QEM 106
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 90 GNLLKAAFESLNLDGDDILTGAELHEVIENLGVG---LSLADCQEIIASMDGDGDGAVSF 146
N +K F ++ D L EL ++ G L+ ++ + ++A+ D DGDG +
Sbjct: 41 ANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGA 100
Query: 147 EDLQLIVNS 155
E+ Q +V+S
Sbjct: 101 EEFQEMVHS 109
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFEDL 149
L+ AF + +G+ ++ + E++ L LS D +I +D DG G V FE+
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 20 LVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFL 77
L E FR +D + +G I+ + I + S ED+ M+ + D + G + EEF+
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDG-LLSLEE---FLEM 79
F FD G+I L ++GY + + V++++ + D L+L++ +E+
Sbjct: 10 FTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEV 69
Query: 80 NTKDMELGSLGNL--LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMD 137
N K+++ + AF+ + + ++ +L ++ LG L+ A+ E++ ++
Sbjct: 70 NEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVE 129
Query: 138 GDGDGAVSFE 147
D +G + ++
Sbjct: 130 VDSNGEIDYK 139
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 123 GLSLADCQEIIASMDGDGDGAVSFEDLQLIVNSL 156
G+S D E+ +D GDG VSFE+ Q++V +
Sbjct: 42 GMSTLD--ELFEELDKAGDGEVSFEEFQVLVKKI 73
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 14 LNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQ 62
N++ ++ FD+D G+I EL G F + G+ ++ ++R+
Sbjct: 84 WNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRR 132
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 29.3 bits (64), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 93 LKAAFESLNL-DGD-DILTGAELHEVIE----NLGVGLSLADCQEIIASMDGDGDGAVSF 146
LK+ FE +GD + L+ EL ++I+ +L G D ++ +D +GDG VSF
Sbjct: 9 LKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLD--DLFQELDKNGDGEVSF 66
Query: 147 EDLQLIVNSL 156
E+ Q++V +
Sbjct: 67 EEFQVLVKKI 76
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEE 75
F FD D G+IT E G S+ED R D ++ G L ++E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDE 170
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF 76
F FD + G I L + ++G R ++E+V EM R+ + G + EF
Sbjct: 82 FACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEF 134
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 56/140 (40%), Gaps = 4/140 (2%)
Query: 15 NHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLE 74
+ + E F D + DG I +L + S+G ++E + MM + G ++
Sbjct: 4 SQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA----PGPINFT 59
Query: 75 EFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIA 134
FL M + + ++++ AF + + + L E++ +G + + E+
Sbjct: 60 MFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYR 119
Query: 135 SMDGDGDGAVSFEDLQLIVN 154
D G ++ + I+
Sbjct: 120 EAPIDKKGNFNYVEFTRILK 139
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEE 75
F D D +G+IT E + G S ED E R D + G L ++E
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEE 75
F D D +G+IT E + G S ED E R D + G L ++E
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|2NPI|A Chain A, Clp1-Atp-Pcf11 Complex
pdb|2NPI|B Chain B, Clp1-Atp-Pcf11 Complex
Length = 460
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 20/86 (23%)
Query: 61 RQGDTNNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTG---------- 110
+Q N GL + E KD+ L + L + + L+LD +G
Sbjct: 218 KQPXVKNFGLERINE-----NKDLYLECISQLGQVVGQRLHLDPQVRRSGCIVDTPSISQ 272
Query: 111 -----AELHEVIENLGVGLSLADCQE 131
AELH +IE L V + L C E
Sbjct: 273 LDENLAELHHIIEKLNVNIXLVLCSE 298
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEE 75
F D D +G+I+ E S G S ED E R D + G L ++E
Sbjct: 115 FDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 22 ETFRAFDSDNDGSITGAELSGIFNSV---GYRASEEDVREMMRQGDTNNDGLLSLEEF 76
+ F+A D+D G I EL + S G ++ + + ++ D + DG + ++EF
Sbjct: 46 KVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 103
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 10 ETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDG 69
E + + + SL+ + D+D DG ++ E +VG +++ D N +G
Sbjct: 95 EEKAMAVIQSLI-MYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNG 153
Query: 70 LLSLEEFL 77
+S +EFL
Sbjct: 154 QISRDEFL 161
>pdb|4GXT|A Chain A, The Crystal Structure Of A Conserved Functionally Unknown
Protein From Anaerococcus Prevotii Dsm 20548
Length = 385
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 22 ETFRAFDSDND---GSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEFLE 78
+ F FD DN G + A L +V ++ E+ E++R+ N D +EF
Sbjct: 40 KPFAVFDWDNTSIIGDVEEALLYYXVRNVSFKXDPEEFYELIRK---NVDRKDYPKEFNN 96
Query: 79 MNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEV 116
++ + + + + +K A+E L + D G L EV
Sbjct: 97 LDKQRVNIDLISQDIKRAYEKLYKNLDRFEGGKTLEEV 134
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 24 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEE 75
F FD D GSI+ E G S+ED + + D +N G L ++E
Sbjct: 122 FDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDE 173
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 12 ETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDTNNDGLL 71
E V+ + + D+D DG ++ E +VG +++ D N +G +
Sbjct: 96 EKAXAVIQSLIXYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQI 155
Query: 72 SLEEFL 77
S +EFL
Sbjct: 156 SRDEFL 161
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 22 ETFRAFDSDNDGSITGAELSGI---FNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF 76
+ F D D G I EL I F+S S ++ + +M GD + G + +EEF
Sbjct: 45 KVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEF 102
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 20 LVETFRAFDSDNDGSITGAELSGI---FNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF 76
L E FR D+D G I EL F S + + + + D + DG + EEF
Sbjct: 43 LKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEF 102
Query: 77 LEM 79
EM
Sbjct: 103 QEM 105
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 93 LKAAFESLNLDGDDILTGAELHEVIENLG-VGLSLADCQEIIASMDGDGDGAVSFEDL 149
L F++++ DG +L E E + L G+ + D + +D +G G V+F++
Sbjct: 135 LTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEF 192
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 41 SGIFNSVGYRASEEDVREMMRQGDTNNDGLLSLEEF 76
SGI G S+ED + M+R+GD + DG L+ EF
Sbjct: 66 SGILGIEGM--SKEDAQGMVREGDLDGDGALNQTEF 99
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 26.2 bits (56), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 20 LVETFRAFDSDNDGSITGAELS---GIFNSVGYRA-SEEDVREMMRQGDTNNDGLLSLEE 75
+ + F D D G I EL +F + G RA ++ + + ++ GD++ DG + +EE
Sbjct: 44 IKKAFVFIDQDKSGFIEEDELKLFLQVFKA-GARALTDAETKAFLKAGDSDGDGAIGVEE 102
Query: 76 FLEM 79
++ +
Sbjct: 103 WVAL 106
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 26.2 bits (56), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 20 LVETFRAFDSDNDGSITGAELS---GIFNSVGYRA-SEEDVREMMRQGDTNNDGLLSLEE 75
+ + F D D G I EL +F + G RA ++ + + ++ GD++ DG + +EE
Sbjct: 43 IKKAFVFIDQDKSGFIEEDELKLFLQVFKA-GARALTDAETKAFLKAGDSDGDGAIGVEE 101
Query: 76 FLEM 79
++ +
Sbjct: 102 WVAL 105
>pdb|1SNL|A Chain A, Nmr Solution Structure Of The Calcium-Binding Domain Of
Nucleobindin (Calnuc)
Length = 103
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 59 MMRQGDTNNDGLLSLEEFL 77
+M+ DTN D L++LEEFL
Sbjct: 77 VMKNVDTNQDRLVTLEEFL 95
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.312 0.133 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,440,574
Number of Sequences: 62578
Number of extensions: 177430
Number of successful extensions: 1233
Number of sequences better than 100.0: 328
Number of HSP's better than 100.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 493
Number of HSP's gapped (non-prelim): 629
length of query: 157
length of database: 14,973,337
effective HSP length: 91
effective length of query: 66
effective length of database: 9,278,739
effective search space: 612396774
effective search space used: 612396774
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 47 (22.7 bits)