Your job contains 1 sequence.
>031588
MASTGQPPSLKRRDVPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS
GMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLT
DYVKVSKVSVEDMLFDEQDINRSMDRIEVCFLSCCLF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031588
(157 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2206076 - symbol:CPSF73-I "cleavage and polyad... 673 3.6e-66 1
ZFIN|ZDB-GENE-030131-3275 - symbol:cpsf3 "cleavage and po... 484 3.8e-46 1
UNIPROTKB|E2R7R2 - symbol:CPSF3 "Uncharacterized protein"... 474 9.7e-45 1
UNIPROTKB|P79101 - symbol:CPSF3 "Cleavage and polyadenyla... 471 1.2e-44 1
UNIPROTKB|Q9UKF6 - symbol:CPSF3 "Cleavage and polyadenyla... 471 1.2e-44 1
MGI|MGI:1859328 - symbol:Cpsf3 "cleavage and polyadenylat... 471 1.2e-44 1
UNIPROTKB|F1NKW5 - symbol:CPSF3 "Uncharacterized protein"... 471 1.2e-44 1
RGD|1305767 - symbol:Cpsf3 "cleavage and polyadenylation ... 471 1.2e-44 1
UNIPROTKB|G3V6W7 - symbol:Cpsf3 "Protein Cpsf3" species:1... 471 1.2e-44 1
POMBASE|SPAC17G6.16c - symbol:ysh1 "mRNA cleavage and pol... 463 2.5e-43 1
UNIPROTKB|I3LKR1 - symbol:CPSF3 "Uncharacterized protein"... 458 4.3e-43 1
DICTYBASE|DDB_G0274799 - symbol:cpsf3 "cleavage and polya... 452 4.5e-42 1
FB|FBgn0261065 - symbol:Cpsf73 "Cleavage and polyadenylat... 434 2.2e-40 1
SGD|S000004267 - symbol:YSH1 "Putative endoribonuclease" ... 388 4.3e-35 1
WB|WBGene00013460 - symbol:cpsf-3 species:6239 "Caenorhab... 386 5.1e-35 1
UNIPROTKB|C9JZH6 - symbol:CPSF3 "Cleavage and polyadenyla... 366 1.2e-33 1
ASPGD|ASPL0000060573 - symbol:AN0990 species:162425 "Emer... 375 1.5e-33 1
UNIPROTKB|G5E9W3 - symbol:CPSF3 "Cleavage and polyadenyla... 366 5.5e-33 1
CGD|CAL0005344 - symbol:orf19.5486 species:5476 "Candida ... 352 4.3e-31 1
UNIPROTKB|Q59P50 - symbol:YSH1 "Endoribonuclease YSH1" sp... 352 4.3e-31 1
GENEDB_PFALCIPARUM|PF14_0364 - symbol:PF14_0364 "cleavage... 301 2.3e-28 2
UNIPROTKB|Q8IL83 - symbol:PF14_0364 "Cleavage and polyade... 301 2.3e-28 2
UNIPROTKB|F1NV30 - symbol:CPSF3L "Integrator complex subu... 264 5.7e-22 1
UNIPROTKB|Q5ZIH0 - symbol:CPSF3L "Integrator complex subu... 264 5.7e-22 1
UNIPROTKB|C9J979 - symbol:CPSF3L "Integrator complex subu... 255 7.0e-22 1
UNIPROTKB|E9PNS4 - symbol:CPSF3L "Integrator complex subu... 255 7.0e-22 1
MGI|MGI:1919207 - symbol:Cpsf3l "cleavage and polyadenyla... 263 7.3e-22 1
RGD|1306841 - symbol:Cpsf3l "cleavage and polyadenylation... 263 7.3e-22 1
WB|WBGene00008642 - symbol:F10B5.8 species:6239 "Caenorha... 262 9.6e-22 1
FB|FBgn0039691 - symbol:IntS11 "Integrator 11" species:72... 259 1.9e-21 1
UNIPROTKB|E1B7Q9 - symbol:CPSF3L "Integrator complex subu... 259 2.0e-21 1
UNIPROTKB|Q5TA45 - symbol:CPSF3L "Integrator complex subu... 255 5.3e-21 1
UNIPROTKB|E9PIL7 - symbol:CPSF3L "Integrator complex subu... 246 6.3e-21 1
UNIPROTKB|E2QY53 - symbol:CPSF3L "Uncharacterized protein... 254 6.8e-21 1
DICTYBASE|DDB_G0278189 - symbol:ints11 "integrator comple... 251 2.3e-20 1
ZFIN|ZDB-GENE-050522-13 - symbol:cpsf3l "cleavage and pol... 248 3.1e-20 1
UNIPROTKB|E9PI75 - symbol:CPSF3L "Integrator complex subu... 239 3.5e-20 1
UNIPROTKB|E9PIG1 - symbol:CPSF3L "Integrator complex subu... 239 3.5e-20 1
UNIPROTKB|Q2YDM2 - symbol:CPSF3L "Integrator complex subu... 245 6.4e-20 1
UNIPROTKB|F1RJE8 - symbol:CPSF3L "Uncharacterized protein... 243 1.1e-19 1
UNIPROTKB|G3V1S5 - symbol:CPSF3L "Integrator complex subu... 239 2.9e-19 1
UNIPROTKB|E9PQF0 - symbol:CPSF3L "Integrator complex subu... 230 3.1e-19 1
TAIR|locus:2065368 - symbol:CPSF73-II "AT2G01730" species... 237 4.9e-19 1
GENEDB_PFALCIPARUM|PFC0825c - symbol:PFC0825c "cleavage a... 133 1.5e-15 2
UNIPROTKB|O77371 - symbol:PFC0825c "Cleavage and polyaden... 133 1.5e-15 2
UNIPROTKB|H0YBH8 - symbol:INTS9 "Integrator complex subun... 119 1.0e-10 2
UNIPROTKB|E5RK47 - symbol:INTS9 "Integrator complex subun... 114 1.0e-10 2
UNIPROTKB|Q8EJC6 - symbol:SO_0541 "RNA-metabolizing metal... 135 3.3e-08 1
TIGR_CMR|SO_0541 - symbol:SO_0541 "metallo-beta-lactamase... 135 3.3e-08 1
TIGR_CMR|CHY_2049 - symbol:CHY_2049 "metallo-beta-lactama... 133 5.8e-08 1
UNIPROTKB|Q81SC3 - symbol:BA_1737 "Metallo-beta-lactamase... 129 1.2e-07 1
TIGR_CMR|BA_1737 - symbol:BA_1737 "metallo-beta-lactamase... 129 1.2e-07 1
TIGR_CMR|DET_1061 - symbol:DET_1061 "metallo-beta-lactama... 129 1.4e-07 1
UNIPROTKB|E5RG70 - symbol:INTS9 "Integrator complex subun... 110 2.1e-07 2
TIGR_CMR|CPS_2623 - symbol:CPS_2623 "metallo-beta-lactama... 121 9.5e-07 1
UNIPROTKB|Q9KV92 - symbol:VC_0264 "Putative uncharacteriz... 121 9.7e-07 1
TIGR_CMR|VC_0264 - symbol:VC_0264 "conserved hypothetical... 121 9.7e-07 1
UNIPROTKB|G3XAN1 - symbol:INTS9 "Integrator complex subun... 110 1.3e-06 2
MGI|MGI:1098533 - symbol:Ints9 "integrator complex subuni... 111 1.3e-06 2
UNIPROTKB|F1MMA6 - symbol:INTS9 "Integrator complex subun... 110 2.3e-06 2
UNIPROTKB|Q2KJA6 - symbol:INTS9 "Integrator complex subun... 110 2.3e-06 2
UNIPROTKB|F6XI08 - symbol:INTS9 "Uncharacterized protein"... 110 2.3e-06 2
UNIPROTKB|Q9NV88 - symbol:INTS9 "Integrator complex subun... 110 2.3e-06 2
UNIPROTKB|Q81SK8 - symbol:BA_1640 "Ribonuclease J" specie... 118 2.7e-06 1
TIGR_CMR|BA_1640 - symbol:BA_1640 "metallo-beta-lactamase... 118 2.7e-06 1
TIGR_CMR|NSE_0829 - symbol:NSE_0829 "metallo-beta-lactama... 117 3.4e-06 1
RGD|1311539 - symbol:Ints9 "integrator complex subunit 9"... 107 1.1e-05 2
TIGR_CMR|CHY_1157 - symbol:CHY_1157 "metallo-beta-lactama... 112 6.0e-05 1
ZFIN|ZDB-GENE-061013-129 - symbol:ints9 "integrator compl... 103 6.8e-05 2
UNIPROTKB|Q5ZKK2 - symbol:INTS9 "Integrator complex subun... 102 9.6e-05 2
WB|WBGene00017313 - symbol:cpsf-2 species:6239 "Caenorhab... 111 0.00016 1
UNIPROTKB|O17403 - symbol:cpsf-2 "Probable cleavage and p... 111 0.00016 1
DICTYBASE|DDB_G0282473 - symbol:ints9 "integrator complex... 104 0.00019 2
UNIPROTKB|Q74C32 - symbol:GSU1843 "RNA exonuclease, beta-... 107 0.00037 1
TIGR_CMR|GSU_1843 - symbol:GSU_1843 "metallo-beta-lactama... 107 0.00037 1
TIGR_CMR|DET_0438 - symbol:DET_0438 "metallo-beta-lactama... 107 0.00045 1
UNIPROTKB|F1RJQ5 - symbol:INTS9 "Uncharacterized protein"... 107 0.00048 1
TAIR|locus:2172843 - symbol:CPSF100 "cleavage and polyade... 107 0.00066 1
>TAIR|locus:2206076 [details] [associations]
symbol:CPSF73-I "cleavage and polyadenylation specificity
factor 73-I" species:3702 "Arabidopsis thaliana" [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006397 "mRNA processing" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010073 "meristem
maintenance" evidence=RCA] [GO:0016246 "RNA interference"
evidence=RCA] [GO:0031507 "heterochromatin assembly" evidence=RCA]
[GO:0045787 "positive regulation of cell cycle" evidence=RCA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006397
GO:GO:0090305 EMBL:AC018908 GO:GO:0004518 eggNOG:COG1236
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
EMBL:AY140900 EMBL:AY150478 EMBL:AY074280 EMBL:AK316692
EMBL:AK316794 IPI:IPI00533462 PIR:G96635 RefSeq:NP_001031215.1
RefSeq:NP_176297.1 RefSeq:NP_849835.1 UniGene:At.23510
ProteinModelPortal:Q9C952 SMR:Q9C952 IntAct:Q9C952 STRING:Q9C952
PaxDb:Q9C952 PRIDE:Q9C952 EnsemblPlants:AT1G61010.1
EnsemblPlants:AT1G61010.2 EnsemblPlants:AT1G61010.3 GeneID:842393
KEGG:ath:AT1G61010 TAIR:At1g61010 HOGENOM:HOG000203394
InParanoid:Q9C952 KO:K14403 OMA:YVSFSAH PhylomeDB:Q9C952
ProtClustDB:CLSN2681829 Genevestigator:Q9C952 InterPro:IPR021718
Pfam:PF11718 SMART:SM01098 Uniprot:Q9C952
Length = 693
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 128/149 (85%), Positives = 141/149 (94%)
Query: 1 MASTGQPPSLKRRDVPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS 60
MAS+ SLKRR+ P+SR+GDQL + PLGAG+EVGRSCVYMS++GK ILFDCGIHPAYS
Sbjct: 1 MASSST--SLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYS 58
Query: 61 GMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLT 120
GMAALPYFDEIDPS+IDVLLITHFH+DHAASLPYFLEKTTF+GRVFMTHATKAIYKLLLT
Sbjct: 59 GMAALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLT 118
Query: 121 DYVKVSKVSVEDMLFDEQDINRSMDRIEV 149
DYVKVSKVSVEDMLFDEQDIN+SMD+IEV
Sbjct: 119 DYVKVSKVSVEDMLFDEQDINKSMDKIEV 147
>ZFIN|ZDB-GENE-030131-3275 [details] [associations]
symbol:cpsf3 "cleavage and polyadenylation
specific factor 3" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001279 Pfam:PF00753
SMART:SM00849 Pfam:PF07521 ZFIN:ZDB-GENE-030131-3275 GO:GO:0016787
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
KO:K14403 InterPro:IPR021718 Pfam:PF11718 SMART:SM01098 CTD:51692
HOVERGEN:HBG051107 EMBL:AY648793 IPI:IPI00509063
RefSeq:NP_001003836.1 UniGene:Dr.77231 ProteinModelPortal:Q6DRG6
SMR:Q6DRG6 STRING:Q6DRG6 GeneID:324554 KEGG:dre:324554
NextBio:20808833 ArrayExpress:Q6DRG6 Uniprot:Q6DRG6
Length = 690
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 88/139 (63%), Positives = 110/139 (79%)
Query: 11 KRRDVPV-SREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFD 69
++ DVPV + E DQL I PLGAG EVGRSC+ + +KG+ I+ DCGIHP GM ALPY D
Sbjct: 5 RKADVPVPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMVDCGIHPGLEGMDALPYID 64
Query: 70 EIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVS 129
IDP+ ID+LLI+HFHLDH +LP+FL+KT+F GR FMTHATKAIY+ LL+DYVKVS +S
Sbjct: 65 LIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNIS 124
Query: 130 VEDMLFDEQDINRSMDRIE 148
+DML+ E D+ SMD+IE
Sbjct: 125 ADDMLYTETDLEESMDKIE 143
>UNIPROTKB|E2R7R2 [details] [associations]
symbol:CPSF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0016787 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 KO:K14403 OMA:YVSFSAH InterPro:IPR021718 Pfam:PF11718
SMART:SM01098 GeneTree:ENSGT00700000104485 EMBL:AAEX03010701
RefSeq:XP_003639652.1 Ensembl:ENSCAFT00000005417 GeneID:100856414
KEGG:cfa:100856414 Uniprot:E2R7R2
Length = 717
Score = 474 (171.9 bits), Expect = 9.7e-45, P = 9.7e-45
Identities = 90/151 (59%), Positives = 113/151 (74%)
Query: 2 ASTGQPPSLKRRDVPVS----REGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHP 57
A+ PP L+R+ +S E DQL I PLGAG EVGRSC+ + +KG+ I+ DCGIHP
Sbjct: 20 AACSSPP-LRRQISEMSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHP 78
Query: 58 AYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKL 117
GM ALPY D IDP+ ID+LLI+HFHLDH +LP+FL+KT+F GR FMTHATKAIY+
Sbjct: 79 GLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRW 138
Query: 118 LLTDYVKVSKVSVEDMLFDEQDINRSMDRIE 148
LL+DYVKVS +S +DML+ E D+ SMD+IE
Sbjct: 139 LLSDYVKVSNISADDMLYTETDLEESMDKIE 169
>UNIPROTKB|P79101 [details] [associations]
symbol:CPSF3 "Cleavage and polyadenylation specificity
factor subunit 3" species:9913 "Bos taurus" [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=ISS] [GO:0006398 "histone mRNA 3'-end processing"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0008409 "5'-3'
exonuclease activity" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0046872 GO:GO:0003723 GO:GO:0030529 GO:GO:0004521
GO:GO:0005847 eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108
Pfam:PF10996 SMART:SM01027 GO:GO:0006398 HOGENOM:HOG000203394
KO:K14403 OMA:YVSFSAH InterPro:IPR021718 Pfam:PF11718 SMART:SM01098
EMBL:X95906 EMBL:BC104553 IPI:IPI00708839 RefSeq:NP_776709.1
UniGene:Bt.5045 ProteinModelPortal:P79101 SMR:P79101 STRING:P79101
PRIDE:P79101 Ensembl:ENSBTAT00000026303 GeneID:281712
KEGG:bta:281712 CTD:51692 GeneTree:ENSGT00700000104485
HOVERGEN:HBG051107 InParanoid:P79101 OrthoDB:EOG4FN4H6
NextBio:20805634 ArrayExpress:P79101 GO:GO:0008409 Uniprot:P79101
Length = 684
Score = 471 (170.9 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 85/134 (63%), Positives = 106/134 (79%)
Query: 15 VPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPS 74
+P + E DQL I PLGAG EVGRSC+ + +KG+ I+ DCGIHP GM ALPY D IDP+
Sbjct: 4 IP-AEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPA 62
Query: 75 AIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDML 134
ID+LLI+HFHLDH +LP+FL+KT+F GR FMTHATKAIY+ LL+DYVKVS +S +DML
Sbjct: 63 EIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDML 122
Query: 135 FDEQDINRSMDRIE 148
+ E D+ SMD+IE
Sbjct: 123 YTETDLEESMDKIE 136
>UNIPROTKB|Q9UKF6 [details] [associations]
symbol:CPSF3 "Cleavage and polyadenylation specificity
factor subunit 3" species:9606 "Homo sapiens" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008409 "5'-3' exonuclease activity" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006398 "histone mRNA 3'-end processing"
evidence=IDA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=IDA] [GO:0006378 "mRNA
polyadenylation" evidence=TAS] [GO:0006379 "mRNA cleavage"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
EMBL:AF017269 Pfam:PF07521 EMBL:AF171877 EMBL:CH471053
GO:GO:0046872 Reactome:REACT_1675 GO:GO:0006378 GO:GO:0003723
GO:GO:0030529 GO:GO:0006406 GO:GO:0004521 GO:GO:0000398
Reactome:REACT_1788 GO:GO:0005847 GO:GO:0006379 GO:GO:0006369
eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 Reactome:REACT_78 GO:GO:0006398 HOGENOM:HOG000203394
KO:K14403 OMA:YVSFSAH InterPro:IPR021718 Pfam:PF11718 SMART:SM01098
CTD:51692 HOVERGEN:HBG051107 OrthoDB:EOG4FN4H6 GO:GO:0008409
EMBL:AC080162 EMBL:BC011654 EMBL:BC020211 IPI:IPI00007818
RefSeq:NP_057291.1 UniGene:Hs.515972 PDB:2I7T PDB:2I7V PDBsum:2I7T
PDBsum:2I7V ProteinModelPortal:Q9UKF6 SMR:Q9UKF6 DIP:DIP-42501N
MINT:MINT-1742891 STRING:Q9UKF6 PhosphoSite:Q9UKF6 DMDM:18203503
PaxDb:Q9UKF6 PeptideAtlas:Q9UKF6 PRIDE:Q9UKF6 DNASU:51692
Ensembl:ENST00000238112 GeneID:51692 KEGG:hsa:51692 UCSC:uc002qzo.1
GeneCards:GC02P009514 HGNC:HGNC:2326 HPA:HPA034657 MIM:606029
neXtProt:NX_Q9UKF6 PharmGKB:PA26843 InParanoid:Q9UKF6
PhylomeDB:Q9UKF6 ChiTaRS:CPSF3 EvolutionaryTrace:Q9UKF6
GenomeRNAi:51692 NextBio:55702 ArrayExpress:Q9UKF6 Bgee:Q9UKF6
CleanEx:HS_CPSF3 Genevestigator:Q9UKF6 GermOnline:ENSG00000119203
Uniprot:Q9UKF6
Length = 684
Score = 471 (170.9 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 85/134 (63%), Positives = 106/134 (79%)
Query: 15 VPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPS 74
+P + E DQL I PLGAG EVGRSC+ + +KG+ I+ DCGIHP GM ALPY D IDP+
Sbjct: 4 IP-AEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPA 62
Query: 75 AIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDML 134
ID+LLI+HFHLDH +LP+FL+KT+F GR FMTHATKAIY+ LL+DYVKVS +S +DML
Sbjct: 63 EIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDML 122
Query: 135 FDEQDINRSMDRIE 148
+ E D+ SMD+IE
Sbjct: 123 YTETDLEESMDKIE 136
>MGI|MGI:1859328 [details] [associations]
symbol:Cpsf3 "cleavage and polyadenylation specificity
factor 3" species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003729 "mRNA binding" evidence=ISO] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0004521 "endoribonuclease activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=ISO;IDA] [GO:0006378 "mRNA polyadenylation" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006398 "histone
mRNA 3'-end processing" evidence=ISO;IDA] [GO:0008409 "5'-3'
exonuclease activity" evidence=IDA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
MGI:MGI:1859328 GO:GO:0046872 GO:GO:0003723 GO:GO:0030529
GO:GO:0004521 GO:GO:0005847 eggNOG:COG1236 InterPro:IPR022712
InterPro:IPR011108 Pfam:PF10996 SMART:SM01027 GO:GO:0006398
HOGENOM:HOG000203394 KO:K14403 OMA:YVSFSAH InterPro:IPR021718
Pfam:PF11718 SMART:SM01098 CTD:51692 GeneTree:ENSGT00700000104485
HOVERGEN:HBG051107 OrthoDB:EOG4FN4H6 GO:GO:0008409 ChiTaRS:CPSF3
EMBL:AF203969 EMBL:BC023297 IPI:IPI00135099 RefSeq:NP_061283.2
UniGene:Mm.356778 ProteinModelPortal:Q9QXK7 SMR:Q9QXK7
STRING:Q9QXK7 PhosphoSite:Q9QXK7 PaxDb:Q9QXK7 PRIDE:Q9QXK7
Ensembl:ENSMUST00000067284 GeneID:54451 KEGG:mmu:54451
InParanoid:Q8CIM0 NextBio:311332 Bgee:Q9QXK7 CleanEx:MM_CPSF3
Genevestigator:Q9QXK7 GermOnline:ENSMUSG00000054309 Uniprot:Q9QXK7
Length = 684
Score = 471 (170.9 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 85/134 (63%), Positives = 106/134 (79%)
Query: 15 VPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPS 74
+P + E DQL I PLGAG EVGRSC+ + +KG+ I+ DCGIHP GM ALPY D IDP+
Sbjct: 4 IP-AEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPA 62
Query: 75 AIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDML 134
ID+LLI+HFHLDH +LP+FL+KT+F GR FMTHATKAIY+ LL+DYVKVS +S +DML
Sbjct: 63 EIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDML 122
Query: 135 FDEQDINRSMDRIE 148
+ E D+ SMD+IE
Sbjct: 123 YTETDLEESMDKIE 136
>UNIPROTKB|F1NKW5 [details] [associations]
symbol:CPSF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004521
"endoribonuclease activity" evidence=IEA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IEA] [GO:0006398 "histone mRNA 3'-end processing"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 GO:GO:0003723 GO:GO:0004521 GO:GO:0005847
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
OMA:YVSFSAH InterPro:IPR021718 Pfam:PF11718 SMART:SM01098
GeneTree:ENSGT00700000104485 GO:GO:0008409 EMBL:AADN02018718
IPI:IPI00600642 Ensembl:ENSGALT00000026493 Uniprot:F1NKW5
Length = 685
Score = 471 (170.9 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 85/134 (63%), Positives = 106/134 (79%)
Query: 15 VPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPS 74
+P + E DQL I PLGAG EVGRSC+ + +KG+ I+ DCGIHP GM ALPY D IDP+
Sbjct: 4 IP-AEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPA 62
Query: 75 AIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDML 134
ID+LLI+HFHLDH +LP+FL+KT+F GR FMTHATKAIY+ LL+DYVKVS +S +DML
Sbjct: 63 EIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDML 122
Query: 135 FDEQDINRSMDRIE 148
+ E D+ SMD+IE
Sbjct: 123 YTETDLEESMDKIE 136
>RGD|1305767 [details] [associations]
symbol:Cpsf3 "cleavage and polyadenylation specific factor 3,
73kDa" species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=ISO] [GO:0004521 "endoribonuclease activity" evidence=ISO]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=ISO] [GO:0006398 "histone mRNA 3'-end processing"
evidence=ISO] [GO:0008409 "5'-3' exonuclease activity"
evidence=ISO] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 RGD:1305767 GO:GO:0016787 eggNOG:COG1236
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
HOGENOM:HOG000203394 KO:K14403 InterPro:IPR021718 Pfam:PF11718
SMART:SM01098 CTD:51692 HOVERGEN:HBG051107 OrthoDB:EOG4FN4H6
UniGene:Rn.100522 EMBL:BC099817 IPI:IPI00365532
RefSeq:NP_001025201.1 ProteinModelPortal:Q499P4 SMR:Q499P4
STRING:Q499P4 GeneID:298916 KEGG:rno:298916 InParanoid:Q499P4
NextBio:644507 Genevestigator:Q499P4 Uniprot:Q499P4
Length = 685
Score = 471 (170.9 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 85/134 (63%), Positives = 106/134 (79%)
Query: 15 VPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPS 74
+P + E DQL I PLGAG EVGRSC+ + +KG+ I+ DCGIHP GM ALPY D IDP+
Sbjct: 4 IP-AEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPA 62
Query: 75 AIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDML 134
ID+LLI+HFHLDH +LP+FL+KT+F GR FMTHATKAIY+ LL+DYVKVS +S +DML
Sbjct: 63 EIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDML 122
Query: 135 FDEQDINRSMDRIE 148
+ E D+ SMD+IE
Sbjct: 123 YTETDLEESMDKIE 136
>UNIPROTKB|G3V6W7 [details] [associations]
symbol:Cpsf3 "Protein Cpsf3" species:10116 "Rattus
norvegicus" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
RGD:1305767 GO:GO:0016787 InterPro:IPR022712 InterPro:IPR011108
Pfam:PF10996 SMART:SM01027 EMBL:CH473947 OMA:YVSFSAH
InterPro:IPR021718 Pfam:PF11718 SMART:SM01098
GeneTree:ENSGT00700000104485 UniGene:Rn.100522
Ensembl:ENSRNOT00000009652 Uniprot:G3V6W7
Length = 685
Score = 471 (170.9 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 85/134 (63%), Positives = 106/134 (79%)
Query: 15 VPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPS 74
+P + E DQL I PLGAG EVGRSC+ + +KG+ I+ DCGIHP GM ALPY D IDP+
Sbjct: 4 IP-AEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPA 62
Query: 75 AIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDML 134
ID+LLI+HFHLDH +LP+FL+KT+F GR FMTHATKAIY+ LL+DYVKVS +S +DML
Sbjct: 63 EIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDML 122
Query: 135 FDEQDINRSMDRIE 148
+ E D+ SMD+IE
Sbjct: 123 YTETDLEESMDKIE 136
>POMBASE|SPAC17G6.16c [details] [associations]
symbol:ysh1 "mRNA cleavage and polyadenylation
specificity factor complex endoribonuclease subunit Ysh1"
species:4896 "Schizosaccharomyces pombe" [GO:0004521
"endoribonuclease activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=IC]
[GO:0006379 "mRNA cleavage" evidence=IC] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001279 Pfam:PF00753
SMART:SM00849 PomBase:SPAC17G6.16c Pfam:PF07521 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006378
GO:GO:0004521 GO:GO:0005847 GO:GO:0006379 eggNOG:COG1236
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
HOGENOM:HOG000203394 InterPro:IPR021718 Pfam:PF11718 SMART:SM01098
OrthoDB:EOG41ZJK7 PIR:T37848 RefSeq:NP_594263.2 STRING:O13794
EnsemblFungi:SPAC17G6.16c.1 GeneID:2542258 NextBio:20803322
Uniprot:O13794
Length = 757
Score = 463 (168.0 bits), Expect = 2.5e-43, P = 2.5e-43
Identities = 86/135 (63%), Positives = 105/135 (77%)
Query: 14 DVPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDP 73
D PV D L I LGAGNEVGRSC + YKGKT++ D G+HPAY+G++ALP+FDE D
Sbjct: 10 DAPVD-PSDLLEFINLGAGNEVGRSCHVIQYKGKTVMLDAGVHPAYTGLSALPFFDEFDL 68
Query: 74 SAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDM 133
S +DVLLI+HFHLDH ASLPY ++KT F GRVFMTH TKA+ K LL+DYVKVS V +ED
Sbjct: 69 STVDVLLISHFHLDHVASLPYVMQKTNFRGRVFMTHPTKAVCKWLLSDYVKVSNVGMEDQ 128
Query: 134 LFDEQDINRSMDRIE 148
L+DE+D+ + DRIE
Sbjct: 129 LYDEKDLLAAFDRIE 143
>UNIPROTKB|I3LKR1 [details] [associations]
symbol:CPSF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008409 "5'-3' exonuclease activity" evidence=IEA]
[GO:0006398 "histone mRNA 3'-end processing" evidence=IEA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0004521 "endoribonuclease activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0003723 GO:GO:0004521 GO:GO:0005847 InterPro:IPR022712
InterPro:IPR011108 Pfam:PF10996 SMART:SM01027 OMA:YVSFSAH
InterPro:IPR021718 Pfam:PF11718 SMART:SM01098
GeneTree:ENSGT00700000104485 GO:GO:0008409 EMBL:FP312696
Ensembl:ENSSSCT00000027309 Uniprot:I3LKR1
Length = 687
Score = 458 (166.3 bits), Expect = 4.3e-43, P = 4.3e-43
Identities = 85/137 (62%), Positives = 106/137 (77%)
Query: 15 VPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPS 74
+P + E DQL I PLGAG EVGRSC+ + +KG+ I+ DCGIHP GM ALPY D IDP+
Sbjct: 4 IP-AEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPA 62
Query: 75 AIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSK---VSVE 131
ID+LLI+HFHLDH +LP+FL+KT+F GR FMTHATKAIY+ LL+DYVKV K +S +
Sbjct: 63 EIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVRKCSNISAD 122
Query: 132 DMLFDEQDINRSMDRIE 148
DML+ E D+ SMD+IE
Sbjct: 123 DMLYTETDLEESMDKIE 139
>DICTYBASE|DDB_G0274799 [details] [associations]
symbol:cpsf3 "cleavage and polyadenylation
specificity factor 73 kDa subunit" species:44689 "Dictyostelium
discoideum" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;IC] [GO:0006379 "mRNA
cleavage" evidence=ISS] [GO:0006378 "mRNA polyadenylation"
evidence=ISS] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
dictyBase:DDB_G0274799 Pfam:PF07521 GO:GO:0046872 GO:GO:0006378
GenomeReviews:CM000151_GR EMBL:AAFI02000012 GO:GO:0003730
GO:GO:0004519 GO:GO:0005847 GO:GO:0006379 eggNOG:COG1236
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
KO:K14403 OMA:YVSFSAH InterPro:IPR021718 Pfam:PF11718 SMART:SM01098
RefSeq:XP_643926.1 ProteinModelPortal:Q86A79 SMR:Q86A79
STRING:Q86A79 EnsemblProtists:DDB0233696 GeneID:8619353
KEGG:ddi:DDB_G0274799 ProtClustDB:CLSZ2431003 Uniprot:Q86A79
Length = 774
Score = 452 (164.2 bits), Expect = 4.5e-42, P = 4.5e-42
Identities = 83/142 (58%), Positives = 113/142 (79%)
Query: 10 LKRRDVPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFD 69
LKR + + D L I P+G+G+EVGRSCV + YKGK ++FDCG+HPAYSG+ +LP+FD
Sbjct: 22 LKRPLKGGTEDDDILEITPIGSGSEVGRSCVLLKYKGKKVMFDCGVHPAYSGLVSLPFFD 81
Query: 70 EIDPSA--IDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSK 127
I+ ID+LL++HFHLDHAA++PYF+ KT F GRVFMTH TKAIY +LL+DYVKVS
Sbjct: 82 SIESDIPDIDLLLVSHFHLDHAAAVPYFVGKTKFKGRVFMTHPTKAIYGMLLSDYVKVSN 141
Query: 128 VSVED-MLFDEQDINRSMDRIE 148
++ +D MLFD+ D++RS+++IE
Sbjct: 142 ITRDDDMLFDKSDLDRSLEKIE 163
>FB|FBgn0261065 [details] [associations]
symbol:Cpsf73 "Cleavage and polyadenylation specificity
factor 73" species:7227 "Drosophila melanogaster" [GO:0006379 "mRNA
cleavage" evidence=ISS] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=ISS;NAS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS;IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006398 "histone mRNA 3'-end
processing" evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001279
Pfam:PF00753 SMART:SM00849 Pfam:PF07521 EMBL:AE014297 GO:GO:0022008
GO:GO:0003677 GO:GO:0006378 GO:GO:0016787 GO:GO:0005847
GO:GO:0006379 eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108
Pfam:PF10996 SMART:SM01027 GO:GO:0006398 KO:K14403 OMA:YVSFSAH
InterPro:IPR021718 Pfam:PF11718 SMART:SM01098
GeneTree:ENSGT00700000104485 EMBL:AY119128 RefSeq:NP_650738.1
UniGene:Dm.13714 SMR:Q9VE51 IntAct:Q9VE51 MINT:MINT-804945
STRING:Q9VE51 EnsemblMetazoa:FBtr0083690 GeneID:42240
KEGG:dme:Dmel_CG7698 UCSC:CG7698-RA CTD:42240 FlyBase:FBgn0261065
InParanoid:Q9VE51 OrthoDB:EOG4P5HR4 GenomeRNAi:42240 NextBio:827838
Uniprot:Q9VE51
Length = 684
Score = 434 (157.8 bits), Expect = 2.2e-40, P = 2.2e-40
Identities = 78/129 (60%), Positives = 98/129 (75%)
Query: 20 EGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVL 79
E D L I PLGAG EVGRSC+ + +KGK I+ DCGIHP SGM ALPY D I+ ID+L
Sbjct: 14 ESDLLQIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPYVDLIEADEIDLL 73
Query: 80 LITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQD 139
I+HFHLDH +LP+FL KT+F GR FMTHATKAIY+ +L+DY+K+S +S E ML+ E D
Sbjct: 74 FISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKISNISTEQMLYTEAD 133
Query: 140 INRSMDRIE 148
+ SM++IE
Sbjct: 134 LEASMEKIE 142
>SGD|S000004267 [details] [associations]
symbol:YSH1 "Putative endoribonuclease" species:4932
"Saccharomyces cerevisiae" [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006378 "mRNA polyadenylation" evidence=IMP] [GO:0006379 "mRNA
cleavage" evidence=IMP] [GO:0006369 "termination of RNA polymerase
II transcription" evidence=IMP] [GO:0031126 "snoRNA 3'-end
processing" evidence=IMP] [GO:0008380 "RNA splicing" evidence=IMP]
[GO:0034247 "snoRNA splicing" evidence=IMP] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IDA;IPI] [GO:0005849 "mRNA cleavage factor complex"
evidence=IPI] [GO:0004521 "endoribonuclease activity"
evidence=ISS;IMP] [GO:0003723 "RNA binding" evidence=IC]
[GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 SGD:S000004267
Pfam:PF07521 GO:GO:0046872 GO:GO:0006378 EMBL:BK006945
GO:GO:0004521 GO:GO:0005847 GO:GO:0006379 GO:GO:0006369
eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 EMBL:U17245 HOGENOM:HOG000203394 KO:K14403
InterPro:IPR021718 Pfam:PF11718 SMART:SM01098
GeneTree:ENSGT00700000104485 GO:GO:0031126 GO:GO:0034247
OMA:EISFAAH OrthoDB:EOG41ZJK7 PIR:S51413 RefSeq:NP_013379.1
ProteinModelPortal:Q06224 SMR:Q06224 DIP:DIP-2470N IntAct:Q06224
MINT:MINT-375457 STRING:Q06224 PaxDb:Q06224 PeptideAtlas:Q06224
EnsemblFungi:YLR277C GeneID:850983 KEGG:sce:YLR277C CYGD:YLR277c
NextBio:967501 Genevestigator:Q06224 GermOnline:YLR277C
Uniprot:Q06224
Length = 779
Score = 388 (141.6 bits), Expect = 4.3e-35, P = 4.3e-35
Identities = 73/128 (57%), Positives = 95/128 (74%)
Query: 29 LGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDH 88
LG NEVGRSC + YKGKT++ D GIHPAY G+A+LP++DE D S +D+LLI+HFHLDH
Sbjct: 14 LGGSNEVGRSCHILQYKGKTVMLDAGIHPAYQGLASLPFYDEFDLSKVDILLISHFHLDH 73
Query: 89 AASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKV--SVEDM------LFDEQDI 140
AASLPY +++T F GRVFMTH TKAIY+ LL D+V+V+ + S M LF ++D+
Sbjct: 74 AASLPYVMQRTNFQGRVFMTHPTKAIYRWLLRDFVRVTSIGSSSSSMGTKDEGLFSDEDL 133
Query: 141 NRSMDRIE 148
S D+IE
Sbjct: 134 VDSFDKIE 141
>WB|WBGene00013460 [details] [associations]
symbol:cpsf-3 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] InterPro:IPR001279 Pfam:PF00753
SMART:SM00849 Pfam:PF07521 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0016787 eggNOG:COG1236 InterPro:IPR022712
InterPro:IPR011108 Pfam:PF10996 SMART:SM01027 HOGENOM:HOG000203394
KO:K14403 OMA:YVSFSAH InterPro:IPR021718 Pfam:PF11718 SMART:SM01098
GeneTree:ENSGT00700000104485 EMBL:AL132951 RefSeq:NP_502553.2
ProteinModelPortal:Q95PY8 SMR:Q95PY8 STRING:Q95PY8 PaxDb:Q95PY8
EnsemblMetazoa:Y67H2A.1.1 EnsemblMetazoa:Y67H2A.1.2 GeneID:178285
KEGG:cel:CELE_Y67H2A.1 UCSC:Y67H2A.1 CTD:178285 WormBase:Y67H2A.1
InParanoid:Q95PY8 NextBio:900506 Uniprot:Q95PY8
Length = 707
Score = 386 (140.9 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 70/129 (54%), Positives = 92/129 (71%)
Query: 22 DQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLI 81
D L PLG+G EVGRSC + YKGK ++ DCG+HP G+ ALP+ D ++ ID+LLI
Sbjct: 9 DSLCFTPLGSGQEVGRSCHLLEYKGKRVMLDCGVHPGLHGVDALPFVDFVEIENIDLLLI 68
Query: 82 THFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVED--MLFDEQD 139
THFHLDH +LP+ L+KT F G+ FMTHATKAIY++LL DYV++SK D L+ E D
Sbjct: 69 THFHLDHCGALPWLLQKTAFQGKCFMTHATKAIYRMLLGDYVRISKYGGPDRNQLYTEDD 128
Query: 140 INRSMDRIE 148
+ +SM +IE
Sbjct: 129 LEKSMAKIE 137
>UNIPROTKB|C9JZH6 [details] [associations]
symbol:CPSF3 "Cleavage and polyadenylation-specificity
factor subunit 3" species:9606 "Homo sapiens" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004521 "endoribonuclease activity"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA] InterPro:IPR001279 Pfam:PF00753 GO:GO:0003723
GO:GO:0004521 GO:GO:0008409 EMBL:AC080162 HGNC:HGNC:2326
ChiTaRS:CPSF3 IPI:IPI00807384 ProteinModelPortal:C9JZH6 SMR:C9JZH6
STRING:C9JZH6 Ensembl:ENST00000475482 HOGENOM:HOG000191757
ArrayExpress:C9JZH6 Bgee:C9JZH6 Uniprot:C9JZH6
Length = 136
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 65/99 (65%), Positives = 80/99 (80%)
Query: 50 LFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTH 109
+ DCGIHP GM ALPY D IDP+ ID+LLI+HFHLDH +LP+FL+KT+F GR FMTH
Sbjct: 1 MLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTH 60
Query: 110 ATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDRIE 148
ATKAIY+ LL+DYVKVS +S +DML+ E D+ SMD+IE
Sbjct: 61 ATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIE 99
>ASPGD|ASPL0000060573 [details] [associations]
symbol:AN0990 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR001279 Pfam:PF00753
SMART:SM00849 Pfam:PF07521 GO:GO:0005634 EMBL:BN001308
GO:GO:0046872 GO:GO:0006397 GO:GO:0090305 GO:GO:0004519
eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 HOGENOM:HOG000203394 KO:K14403 InterPro:IPR021718
Pfam:PF11718 SMART:SM01098 EMBL:AACD01000015 RefSeq:XP_658594.1
ProteinModelPortal:Q5BEP0 STRING:Q5BEP0
EnsemblFungi:CADANIAT00001661 GeneID:2876766 KEGG:ani:AN0990.2
OMA:EISFAAH OrthoDB:EOG41ZJK7 Uniprot:Q5BEP0
Length = 884
Score = 375 (137.1 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 75/139 (53%), Positives = 95/139 (68%)
Query: 14 DVPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDP 73
D PV D+L LG GNEVGRSC + YKGKT++ D G+HPA G +ALP+FDE D
Sbjct: 15 DEPVD-PSDELAFYCLGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKEGFSALPFFDEFDL 73
Query: 74 SAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKV-SVED 132
S +D+LLI+HFH+DH+++LPY L KT F GRVFMTHATKAIYK L+ D V+V+ S D
Sbjct: 74 STVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVNNTASSSD 133
Query: 133 M---LFDEQDINRSMDRIE 148
L+ E D ++ IE
Sbjct: 134 QRTTLYTEHDHLSTLPLIE 152
>UNIPROTKB|G5E9W3 [details] [associations]
symbol:CPSF3 "Cleavage and polyadenylation-specificity
factor subunit 3" species:9606 "Homo sapiens" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004521 "endoribonuclease activity"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 EMBL:CH471053 GO:GO:0003723 GO:GO:0004521
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
InterPro:IPR021718 Pfam:PF11718 SMART:SM01098 GO:GO:0008409
EMBL:AC080162 UniGene:Hs.515972 HGNC:HGNC:2326 ChiTaRS:CPSF3
ProteinModelPortal:G5E9W3 SMR:G5E9W3 PRIDE:G5E9W3
Ensembl:ENST00000460593 ArrayExpress:G5E9W3 Bgee:G5E9W3
Uniprot:G5E9W3
Length = 647
Score = 366 (133.9 bits), Expect = 5.5e-33, P = 5.5e-33
Identities = 65/99 (65%), Positives = 80/99 (80%)
Query: 50 LFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTH 109
+ DCGIHP GM ALPY D IDP+ ID+LLI+HFHLDH +LP+FL+KT+F GR FMTH
Sbjct: 1 MLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTH 60
Query: 110 ATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDRIE 148
ATKAIY+ LL+DYVKVS +S +DML+ E D+ SMD+IE
Sbjct: 61 ATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIE 99
>CGD|CAL0005344 [details] [associations]
symbol:orf19.5486 species:5476 "Candida albicans" [GO:0042493
"response to drug" evidence=IMP] [GO:0004521 "endoribonuclease
activity" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0034247 "snoRNA splicing"
evidence=IEA] [GO:0031126 "snoRNA 3'-end processing" evidence=IEA]
[GO:0006379 "mRNA cleavage" evidence=IEA] [GO:0006369 "termination
of RNA polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] InterPro:IPR001279 Pfam:PF00753
SMART:SM00849 CGD:CAL0005344 Pfam:PF07521 GO:GO:0005634
GO:GO:0042493 GO:GO:0046872 GO:GO:0006397 GO:GO:0090305
GO:GO:0004519 eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108
Pfam:PF10996 SMART:SM01027 KO:K14403 InterPro:IPR021718
Pfam:PF11718 SMART:SM01098 EMBL:AACQ01000196 EMBL:AACQ01000195
RefSeq:XP_711478.1 RefSeq:XP_711502.1 ProteinModelPortal:Q59P50
STRING:Q59P50 GeneID:3646887 GeneID:3646911 KEGG:cal:CaO19.12941
KEGG:cal:CaO19.5486 Uniprot:Q59P50
Length = 870
Score = 352 (129.0 bits), Expect = 4.3e-31, P = 4.3e-31
Identities = 69/130 (53%), Positives = 92/130 (70%)
Query: 29 LGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDH 88
LG NEVGRSC + YK K I+ D G+HPA SG A+ PYFDE D S +D+LLI+HFH+DH
Sbjct: 105 LGGCNEVGRSCHIIEYKNKVIMLDSGMHPALSGHASFPYFDEYDISKVDILLISHFHVDH 164
Query: 89 AASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVS---VED-------MLFDEQ 138
+ASLPY ++++ F G+VFMTHATKAIY+ L+ D+V+V+ + ED L+ +
Sbjct: 165 SASLPYVMQQSNFRGKVFMTHATKAIYRWLMQDFVRVTSIGNSRSEDGGGGEGSNLYTDD 224
Query: 139 DINRSMDRIE 148
DI +S DRIE
Sbjct: 225 DIMKSFDRIE 234
>UNIPROTKB|Q59P50 [details] [associations]
symbol:YSH1 "Endoribonuclease YSH1" species:237561 "Candida
albicans SC5314" [GO:0042493 "response to drug" evidence=IMP]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 CGD:CAL0005344
Pfam:PF07521 GO:GO:0005634 GO:GO:0042493 GO:GO:0046872
GO:GO:0006397 GO:GO:0090305 GO:GO:0004519 eggNOG:COG1236
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
KO:K14403 InterPro:IPR021718 Pfam:PF11718 SMART:SM01098
EMBL:AACQ01000196 EMBL:AACQ01000195 RefSeq:XP_711478.1
RefSeq:XP_711502.1 ProteinModelPortal:Q59P50 STRING:Q59P50
GeneID:3646887 GeneID:3646911 KEGG:cal:CaO19.12941
KEGG:cal:CaO19.5486 Uniprot:Q59P50
Length = 870
Score = 352 (129.0 bits), Expect = 4.3e-31, P = 4.3e-31
Identities = 69/130 (53%), Positives = 92/130 (70%)
Query: 29 LGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDH 88
LG NEVGRSC + YK K I+ D G+HPA SG A+ PYFDE D S +D+LLI+HFH+DH
Sbjct: 105 LGGCNEVGRSCHIIEYKNKVIMLDSGMHPALSGHASFPYFDEYDISKVDILLISHFHVDH 164
Query: 89 AASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVS---VED-------MLFDEQ 138
+ASLPY ++++ F G+VFMTHATKAIY+ L+ D+V+V+ + ED L+ +
Sbjct: 165 SASLPYVMQQSNFRGKVFMTHATKAIYRWLMQDFVRVTSIGNSRSEDGGGGEGSNLYTDD 224
Query: 139 DINRSMDRIE 148
DI +S DRIE
Sbjct: 225 DIMKSFDRIE 234
>GENEDB_PFALCIPARUM|PF14_0364 [details] [associations]
symbol:PF14_0364 "cleavage and polyadenylation
specifity factor protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0006378 "mRNA
polyadenylation" evidence=ISS] [GO:0006379 "mRNA cleavage"
evidence=ISS] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 GO:GO:0016787 EMBL:AE014187 GO:GO:0005847
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
HOGENOM:HOG000203394 KO:K14403 InterPro:IPR021718 Pfam:PF11718
SMART:SM01098 RefSeq:XP_001348538.1 ProteinModelPortal:Q8IL83
PRIDE:Q8IL83 EnsemblProtists:PF14_0364:mRNA GeneID:811946
KEGG:pfa:PF14_0364 EuPathDB:PlasmoDB:PF3D7_1438500 OMA:CLITHFH
ProtClustDB:CLSZ2457730 Uniprot:Q8IL83
Length = 876
Score = 301 (111.0 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 52/104 (50%), Positives = 72/104 (69%)
Query: 24 LTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITH 83
+ I+ LG +EVGRSCV + +++ DCGIHPA+ G+ LP +D D S +D+ LITH
Sbjct: 4 INIVCLGGASEVGRSCVIIECDKTSVMLDCGIHPAFMGIGCLPIYDAYDISKVDLCLITH 63
Query: 84 FHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSK 127
FH+DH+ +LPY + KT F GR+FMT ATK+I LL DY ++ K
Sbjct: 64 FHMDHSGALPYLINKTRFKGRIFMTEATKSICYLLWNDYARIEK 107
Score = 52 (23.4 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 9/17 (52%), Positives = 15/17 (88%)
Query: 132 DMLFDEQDINRSMDRIE 148
++L+DE DI+++MD IE
Sbjct: 165 NVLYDENDIDKTMDLIE 181
>UNIPROTKB|Q8IL83 [details] [associations]
symbol:PF14_0364 "Cleavage and polyadenylation specificity
factor protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=ISS] InterPro:IPR001279 Pfam:PF00753
SMART:SM00849 Pfam:PF07521 GO:GO:0016787 EMBL:AE014187
GO:GO:0005847 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 HOGENOM:HOG000203394 KO:K14403 InterPro:IPR021718
Pfam:PF11718 SMART:SM01098 RefSeq:XP_001348538.1
ProteinModelPortal:Q8IL83 PRIDE:Q8IL83
EnsemblProtists:PF14_0364:mRNA GeneID:811946 KEGG:pfa:PF14_0364
EuPathDB:PlasmoDB:PF3D7_1438500 OMA:CLITHFH ProtClustDB:CLSZ2457730
Uniprot:Q8IL83
Length = 876
Score = 301 (111.0 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 52/104 (50%), Positives = 72/104 (69%)
Query: 24 LTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITH 83
+ I+ LG +EVGRSCV + +++ DCGIHPA+ G+ LP +D D S +D+ LITH
Sbjct: 4 INIVCLGGASEVGRSCVIIECDKTSVMLDCGIHPAFMGIGCLPIYDAYDISKVDLCLITH 63
Query: 84 FHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSK 127
FH+DH+ +LPY + KT F GR+FMT ATK+I LL DY ++ K
Sbjct: 64 FHMDHSGALPYLINKTRFKGRIFMTEATKSICYLLWNDYARIEK 107
Score = 52 (23.4 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 9/17 (52%), Positives = 15/17 (88%)
Query: 132 DMLFDEQDINRSMDRIE 148
++L+DE DI+++MD IE
Sbjct: 165 NVLYDENDIDKTMDLIE 181
>UNIPROTKB|F1NV30 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0016787 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 OMA:MAVEYMS GeneTree:ENSGT00700000104485
IPI:IPI00571913 EMBL:AADN02040858 Ensembl:ENSGALT00000002586
Uniprot:F1NV30
Length = 600
Score = 264 (98.0 bits), Expect = 5.7e-22, P = 5.7e-22
Identities = 52/131 (39%), Positives = 76/131 (58%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----ID 77
++ + PLGAG +VGRSC+ +S GK ++ DCG+H Y+ P F I + +D
Sbjct: 3 EIKVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGYNDDRRFPDFSYITQNGRLTDFLD 62
Query: 78 VLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFD 136
++I+HFHLDH +LPYF E + G ++MTH TKAI +LL DY K++ E F
Sbjct: 63 CVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTKAICPILLEDYRKITVDKKGETNFFT 122
Query: 137 EQDINRSMDRI 147
Q I M ++
Sbjct: 123 SQMIKDCMKKV 133
>UNIPROTKB|Q5ZIH0 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001279 Pfam:PF00753
SMART:SM00849 Pfam:PF07521 GO:GO:0016787 eggNOG:COG1236
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
HOGENOM:HOG000231294 KO:K13148 GO:GO:0032039 GO:GO:0016180
HOVERGEN:HBG080215 OrthoDB:EOG4GXFMB EMBL:AJ720814 IPI:IPI00571913
RefSeq:NP_001012854.1 UniGene:Gga.13403 ProteinModelPortal:Q5ZIH0
STRING:Q5ZIH0 GeneID:419418 KEGG:gga:419418 CTD:54973
InParanoid:Q5ZIH0 NextBio:20822477 Uniprot:Q5ZIH0
Length = 600
Score = 264 (98.0 bits), Expect = 5.7e-22, P = 5.7e-22
Identities = 52/131 (39%), Positives = 76/131 (58%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----ID 77
++ + PLGAG +VGRSC+ +S GK ++ DCG+H Y+ P F I + +D
Sbjct: 3 EIKVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGYNDDRRFPDFSYITQNGRLTDFLD 62
Query: 78 VLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFD 136
++I+HFHLDH +LPYF E + G ++MTH TKAI +LL DY K++ E F
Sbjct: 63 CVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTKAICPILLEDYRKITVDKKGETNFFT 122
Query: 137 EQDINRSMDRI 147
Q I M ++
Sbjct: 123 SQMIKDCMKKV 133
>UNIPROTKB|C9J979 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9606
"Homo sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 GO:GO:0016787
EMBL:AL139287 InterPro:IPR022712 Pfam:PF10996 HOGENOM:HOG000231294
HGNC:HGNC:26052 ChiTaRS:CPSF3L IPI:IPI00514808
ProteinModelPortal:C9J979 SMR:C9J979 STRING:C9J979
Ensembl:ENST00000434694 ArrayExpress:C9J979 Bgee:C9J979
Uniprot:C9J979
Length = 344
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 50/131 (38%), Positives = 76/131 (58%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----ID 77
++ + PLGAG +VGRSC+ +S GK ++ DCG+H ++ P F I + +D
Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLD 62
Query: 78 VLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFD 136
++I+HFHLDH +LPYF E + G ++MTH T+AI +LL DY K++ E F
Sbjct: 63 CVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFT 122
Query: 137 EQDINRSMDRI 147
Q I M ++
Sbjct: 123 SQMIKDCMKKV 133
>UNIPROTKB|E9PNS4 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9606
"Homo sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 GO:GO:0016787
EMBL:AL139287 HGNC:HGNC:26052 ChiTaRS:CPSF3L IPI:IPI00984775
ProteinModelPortal:E9PNS4 SMR:E9PNS4 Ensembl:ENST00000528879
ArrayExpress:E9PNS4 Bgee:E9PNS4 Uniprot:E9PNS4
Length = 278
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 50/131 (38%), Positives = 76/131 (58%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----ID 77
++ + PLGAG +VGRSC+ +S GK ++ DCG+H ++ P F I + +D
Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLD 62
Query: 78 VLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFD 136
++I+HFHLDH +LPYF E + G ++MTH T+AI +LL DY K++ E F
Sbjct: 63 CVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFT 122
Query: 137 EQDINRSMDRI 147
Q I M ++
Sbjct: 123 SQMIKDCMKKV 133
>MGI|MGI:1919207 [details] [associations]
symbol:Cpsf3l "cleavage and polyadenylation specific factor
3-like" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 MGI:MGI:1919207 GO:GO:0005737 GO:GO:0016787
eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 HOGENOM:HOG000231294 KO:K13148 OMA:MAVEYMS
GeneTree:ENSGT00700000104485 GO:GO:0032039 GO:GO:0016180
HOVERGEN:HBG080215 OrthoDB:EOG4GXFMB CTD:54973 EMBL:AK010425
EMBL:AK090206 EMBL:AK150436 EMBL:AK152740 EMBL:AK167607
EMBL:AK172533 EMBL:BC008240 EMBL:BC011155 IPI:IPI00467084
RefSeq:NP_082296.1 UniGene:Mm.259270 UniGene:Mm.475640
ProteinModelPortal:Q9CWS4 SMR:Q9CWS4 STRING:Q9CWS4
PhosphoSite:Q9CWS4 PaxDb:Q9CWS4 PRIDE:Q9CWS4
Ensembl:ENSMUST00000030901 GeneID:71957 KEGG:mmu:71957
InParanoid:Q9CWS4 NextBio:335052 Bgee:Q9CWS4 Genevestigator:Q9CWS4
GermOnline:ENSMUSG00000029034 Uniprot:Q9CWS4
Length = 600
Score = 263 (97.6 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 52/131 (39%), Positives = 76/131 (58%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----ID 77
++ + PLGAG +VGRSC+ +S GK ++ DCG+H Y+ P F I S +D
Sbjct: 3 EIRVTPLGAGQDVGRSCILVSISGKNVMLDCGMHMGYNDDRRFPDFSYITQSGRLTDFLD 62
Query: 78 VLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFD 136
++I+HFHLDH +LPYF E + G ++MTH T+AI +LL DY K++ E F
Sbjct: 63 CVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFT 122
Query: 137 EQDINRSMDRI 147
Q I M ++
Sbjct: 123 SQMIKDCMKKV 133
>RGD|1306841 [details] [associations]
symbol:Cpsf3l "cleavage and polyadenylation specific factor
3-like" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001279 Pfam:PF00753
SMART:SM00849 Pfam:PF07521 RGD:1306841 GO:GO:0005634 GO:GO:0005737
GO:GO:0016787 eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108
Pfam:PF10996 SMART:SM01027 HOGENOM:HOG000231294 KO:K13148
OMA:MAVEYMS GeneTree:ENSGT00700000104485 HOVERGEN:HBG080215
OrthoDB:EOG4GXFMB CTD:54973 EMBL:BC105303 IPI:IPI00365477
RefSeq:NP_001029064.1 UniGene:Rn.98615 ProteinModelPortal:Q3MHC2
STRING:Q3MHC2 Ensembl:ENSRNOT00000026725 GeneID:298688
KEGG:rno:298688 InParanoid:Q3MHC2 NextBio:644186
Genevestigator:Q3MHC2 GermOnline:ENSRNOG00000019712 Uniprot:Q3MHC2
Length = 600
Score = 263 (97.6 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 52/131 (39%), Positives = 76/131 (58%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----ID 77
++ + PLGAG +VGRSC+ +S GK ++ DCG+H Y+ P F I S +D
Sbjct: 3 EIRVTPLGAGQDVGRSCILVSISGKNVMLDCGMHMGYNDDRRFPDFSYITQSGRLTDFLD 62
Query: 78 VLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFD 136
++I+HFHLDH +LPYF E + G ++MTH T+AI +LL DY K++ E F
Sbjct: 63 CVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFT 122
Query: 137 EQDINRSMDRI 147
Q I M ++
Sbjct: 123 SQMIKDCMKKV 133
>WB|WBGene00008642 [details] [associations]
symbol:F10B5.8 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0009792 EMBL:Z48334 GO:GO:0016787 eggNOG:COG1236
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
HOGENOM:HOG000231294 KO:K13148 OMA:MAVEYMS
GeneTree:ENSGT00700000104485 PIR:T20694 RefSeq:NP_495706.2
ProteinModelPortal:Q9U3K2 SMR:Q9U3K2 STRING:Q9U3K2 PaxDb:Q9U3K2
EnsemblMetazoa:F10B5.8 GeneID:174310 KEGG:cel:CELE_F10B5.8
UCSC:F10B5.8 CTD:174310 WormBase:F10B5.8 InParanoid:Q9U3K2
NextBio:883468 Uniprot:Q9U3K2
Length = 608
Score = 262 (97.3 bits), Expect = 9.6e-22, P = 9.6e-22
Identities = 54/136 (39%), Positives = 76/136 (55%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----ID 77
++ I+PLGAG +VGRSC+ ++ GK I+ DCG+H Y P F I +D
Sbjct: 7 EIKIVPLGAGQDVGRSCILITIGGKNIMVDCGMHMGYQDDRRFPDFSYIGGGGRLTDYLD 66
Query: 78 VLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFD 136
++I+HFHLDH SLP+ E + G ++MT+ TKAI +LL DY KV + E F
Sbjct: 67 CVIISHFHLDHCGSLPHMSEIVGYDGPIYMTYPTKAICPVLLEDYRKVQCDIKGETNFFT 126
Query: 137 EQDINRSMDRIEVCFL 152
DI M ++ C L
Sbjct: 127 SDDIKNCMKKVVGCAL 142
>FB|FBgn0039691 [details] [associations]
symbol:IntS11 "Integrator 11" species:7227 "Drosophila
melanogaster" [GO:0006379 "mRNA cleavage" evidence=ISS] [GO:0005847
"mRNA cleavage and polyadenylation specificity factor complex"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0034472 "snRNA
3'-end processing" evidence=IDA] [GO:0016180 "snRNA processing"
evidence=ISS] [GO:0032039 "integrator complex" evidence=ISS]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001279
SMART:SM00849 Pfam:PF07521 EMBL:AE014297 GO:GO:0022008
GO:GO:0006378 GO:GO:0016787 GO:GO:0005847 GO:GO:0006379
eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 KO:K13148 OMA:MAVEYMS GeneTree:ENSGT00700000104485
GO:GO:0034472 EMBL:AY061097 RefSeq:NP_651721.1 UniGene:Dm.3722
SMR:Q9VAH9 STRING:Q9VAH9 EnsemblMetazoa:FBtr0085476 GeneID:43506
KEGG:dme:Dmel_CG1972 UCSC:CG1972-RA CTD:43506 FlyBase:FBgn0039691
InParanoid:Q9VAH9 OrthoDB:EOG47D7X3 GenomeRNAi:43506 NextBio:834295
Uniprot:Q9VAH9
Length = 597
Score = 259 (96.2 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 56/130 (43%), Positives = 76/130 (58%)
Query: 24 LTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDP-----SAIDV 78
+ I PLGAG +VGRSC+ +S GK I+ DCG+H Y+ P F I P S ID
Sbjct: 4 IKITPLGAGQDVGRSCLLLSMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSHIDC 63
Query: 79 LLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFDE 137
++I+HFHLDH +LPY E ++G ++MTH TKAI +LL D KV+ + E F
Sbjct: 64 VIISHFHLDHCGALPYMSEIVGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTT 123
Query: 138 QDINRSMDRI 147
Q I M ++
Sbjct: 124 QMIKDCMKKV 133
>UNIPROTKB|E1B7Q9 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9913
"Bos taurus" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0016787 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 OMA:MAVEYMS GeneTree:ENSGT00700000104485
EMBL:DAAA02043243 IPI:IPI00971575 Ensembl:ENSBTAT00000010020
Uniprot:E1B7Q9
Length = 598
Score = 259 (96.2 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 51/130 (39%), Positives = 75/130 (57%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----ID 77
++ + PLGAG +VGRSC+ +S GK ++ DCG+H +S P F I S +D
Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFSDDRRFPDFSYITRSGRLTDFLD 62
Query: 78 VLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDE 137
++I+HFHLDH +LPYF E + G ++MT T+AI +LL DY K++ E F
Sbjct: 63 CVIISHFHLDHCGALPYFSEMVGYDGPIYMTQPTQAICPILLEDYRKIAVDKGEANFFTS 122
Query: 138 QDINRSMDRI 147
Q I M ++
Sbjct: 123 QMIKDCMKKV 132
>UNIPROTKB|Q5TA45 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9606
"Homo sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 GO:GO:0005634 GO:GO:0005737 GO:GO:0016787
EMBL:AL139287 eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108
Pfam:PF10996 SMART:SM01027 KO:K13148 HOVERGEN:HBG080215
OrthoDB:EOG4GXFMB CTD:54973 EMBL:AL136813 EMBL:AK000549
EMBL:AK021939 EMBL:AK023356 EMBL:AK297350 EMBL:CR533557
EMBL:BC000675 EMBL:BC007978 EMBL:BC013904 EMBL:BK005728
EMBL:BK005673 IPI:IPI00063404 IPI:IPI00306882 IPI:IPI00514973
RefSeq:NP_001243392.1 RefSeq:NP_060341.2 UniGene:Hs.6449
ProteinModelPortal:Q5TA45 SMR:Q5TA45 IntAct:Q5TA45
MINT:MINT-1482228 STRING:Q5TA45 PhosphoSite:Q5TA45 DMDM:118572557
PaxDb:Q5TA45 PRIDE:Q5TA45 DNASU:54973 Ensembl:ENST00000419704
Ensembl:ENST00000435064 Ensembl:ENST00000450926
Ensembl:ENST00000545578 GeneID:54973 KEGG:hsa:54973 UCSC:uc001aee.1
UCSC:uc001aeh.1 UCSC:uc009vjz.1 GeneCards:GC01M001236
HGNC:HGNC:26052 HPA:HPA028379 HPA:HPA029025 MIM:611354
neXtProt:NX_Q5TA45 PharmGKB:PA142672080 InParanoid:Q5TA45
PhylomeDB:Q5TA45 ChiTaRS:CPSF3L GenomeRNAi:54973 NextBio:58222
ArrayExpress:Q5TA45 Bgee:Q5TA45 Genevestigator:Q5TA45
GermOnline:ENSG00000127054 Uniprot:Q5TA45
Length = 600
Score = 255 (94.8 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 50/131 (38%), Positives = 76/131 (58%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----ID 77
++ + PLGAG +VGRSC+ +S GK ++ DCG+H ++ P F I + +D
Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLD 62
Query: 78 VLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFD 136
++I+HFHLDH +LPYF E + G ++MTH T+AI +LL DY K++ E F
Sbjct: 63 CVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFT 122
Query: 137 EQDINRSMDRI 147
Q I M ++
Sbjct: 123 SQMIKDCMKKV 133
>UNIPROTKB|E9PIL7 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9606
"Homo sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 GO:GO:0016787 EMBL:AL139287
HGNC:HGNC:26052 ChiTaRS:CPSF3L IPI:IPI00977321
ProteinModelPortal:E9PIL7 SMR:E9PIL7 Ensembl:ENST00000534345
ArrayExpress:E9PIL7 Bgee:E9PIL7 Uniprot:E9PIL7
Length = 140
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 50/132 (37%), Positives = 76/132 (57%)
Query: 23 QLTIIPL-GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----I 76
++ + PL GAG +VGRSC+ +S GK ++ DCG+H ++ P F I + +
Sbjct: 3 EIRVTPLVGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFL 62
Query: 77 DVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLF 135
D ++I+HFHLDH +LPYF E + G ++MTH T+AI +LL DY K++ E F
Sbjct: 63 DCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFF 122
Query: 136 DEQDINRSMDRI 147
Q I M ++
Sbjct: 123 TSQMIKDCMKKV 134
>UNIPROTKB|E2QY53 [details] [associations]
symbol:CPSF3L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0016787 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 KO:K13148 OMA:MAVEYMS GeneTree:ENSGT00700000104485
EMBL:AAEX03003844 RefSeq:XP_003639102.1 Ensembl:ENSCAFT00000030626
GeneID:100855777 KEGG:cfa:100855777 Uniprot:E2QY53
Length = 600
Score = 254 (94.5 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 50/131 (38%), Positives = 76/131 (58%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----ID 77
++ + PLGAG +VGRSC+ +S GK ++ DCG+H ++ P F I + +D
Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITRNGRLTDFLD 62
Query: 78 VLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFD 136
++I+HFHLDH +LPYF E + G ++MTH T+AI +LL DY K++ E F
Sbjct: 63 CVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFT 122
Query: 137 EQDINRSMDRI 147
Q I M ++
Sbjct: 123 SQMIKDCMKKV 133
>DICTYBASE|DDB_G0278189 [details] [associations]
symbol:ints11 "integrator complex subunit 11"
species:44689 "Dictyostelium discoideum" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
dictyBase:DDB_G0278189 Pfam:PF07521 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0016787
eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 KO:K13148 RefSeq:XP_642189.1
ProteinModelPortal:Q54YL3 PRIDE:Q54YL3 EnsemblProtists:DDB0234100
GeneID:8621396 KEGG:ddi:DDB_G0278189 OMA:RTIANET
ProtClustDB:CLSZ2729107 Uniprot:Q54YL3
Length = 744
Score = 251 (93.4 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 52/130 (40%), Positives = 75/130 (57%)
Query: 24 LTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----IDV 78
+ ++PLGAG +VGRSCV ++ K I+FDCG+H + P F I + ID
Sbjct: 3 IKVVPLGAGQDVGRSCVIVTIGNKNIMFDCGMHMGMNDARRFPDFSYISKNGQFTKVIDC 62
Query: 79 LLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFDE 137
++ITHFHLDH +LP+F E + G ++MT TKAI +LL DY K++ + E F
Sbjct: 63 VIITHFHLDHCGALPFFTEMCGYDGPIYMTLPTKAICPILLEDYRKITVEKKGETNFFTA 122
Query: 138 QDINRSMDRI 147
Q I M ++
Sbjct: 123 QMIKDCMKKV 132
>ZFIN|ZDB-GENE-050522-13 [details] [associations]
symbol:cpsf3l "cleavage and polyadenylation specific
factor 3-like" species:7955 "Danio rerio" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
ZFIN:ZDB-GENE-050522-13 GO:GO:0016787 GO:GO:0043484
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
OMA:MAVEYMS GeneTree:ENSGT00700000104485 EMBL:CABZ01054885
EMBL:CR846089 IPI:IPI00865509 Ensembl:ENSDART00000102902
Uniprot:E7EXW1
Length = 601
Score = 248 (92.4 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 50/130 (38%), Positives = 74/130 (56%)
Query: 24 LTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----IDV 78
+ + PLGAG +VGRSC+ +S GK I+ DCG+H ++ P F I + +D
Sbjct: 4 IKVTPLGAGQDVGRSCILVSIGGKNIMLDCGMHMGFNDDRRFPDFSYITQNGRLTEFLDC 63
Query: 79 LLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFDE 137
++I+HFHLDH +LPY E + G ++MTH TKAI +LL D+ K++ E F
Sbjct: 64 VIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDFRKITVDKKGETNFFTS 123
Query: 138 QDINRSMDRI 147
Q I M ++
Sbjct: 124 QMIKDCMKKV 133
>UNIPROTKB|E9PI75 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9606
"Homo sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 GO:GO:0016787
EMBL:AL139287 HGNC:HGNC:26052 ChiTaRS:CPSF3L IPI:IPI01011963
ProteinModelPortal:E9PI75 SMR:E9PI75 Ensembl:ENST00000527719
ArrayExpress:E9PI75 Bgee:E9PI75 Uniprot:E9PI75
Length = 209
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 48/124 (38%), Positives = 71/124 (57%)
Query: 30 GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----IDVLLITHF 84
GAG +VGRSC+ +S GK ++ DCG+H ++ P F I + +D ++I+HF
Sbjct: 16 GAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHF 75
Query: 85 HLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFDEQDINRS 143
HLDH +LPYF E + G ++MTH T+AI +LL DY K++ E F Q I
Sbjct: 76 HLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDC 135
Query: 144 MDRI 147
M ++
Sbjct: 136 MKKV 139
>UNIPROTKB|E9PIG1 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9606
"Homo sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 GO:GO:0016787
EMBL:AL139287 HGNC:HGNC:26052 ChiTaRS:CPSF3L IPI:IPI00981641
ProteinModelPortal:E9PIG1 SMR:E9PIG1 Ensembl:ENST00000530031
ArrayExpress:E9PIG1 Bgee:E9PIG1 Uniprot:E9PIG1
Length = 249
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 48/124 (38%), Positives = 71/124 (57%)
Query: 30 GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----IDVLLITHF 84
GAG +VGRSC+ +S GK ++ DCG+H ++ P F I + +D ++I+HF
Sbjct: 57 GAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHF 116
Query: 85 HLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFDEQDINRS 143
HLDH +LPYF E + G ++MTH T+AI +LL DY K++ E F Q I
Sbjct: 117 HLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDC 176
Query: 144 MDRI 147
M ++
Sbjct: 177 MKKV 180
>UNIPROTKB|Q2YDM2 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 GO:GO:0005634 GO:GO:0005737 GO:GO:0016787
eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 HOGENOM:HOG000231294 EMBL:BC110155 IPI:IPI00725178
UniGene:Bt.4894 ProteinModelPortal:Q2YDM2 STRING:Q2YDM2
PRIDE:Q2YDM2 HOVERGEN:HBG080215 InParanoid:Q2YDM2 OrthoDB:EOG4GXFMB
Uniprot:Q2YDM2
Length = 599
Score = 245 (91.3 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 50/131 (38%), Positives = 74/131 (56%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----ID 77
++ + PLGAG +VGRSC+ +S GK ++ DCG+H +S P F S +D
Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFSDDRRFPDFSYNTRSGRLTDFLD 62
Query: 78 VLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFD 136
++I+HFHLDH +LPYF E + G ++MT T+AI +LL DY K++ E F
Sbjct: 63 CVIISHFHLDHCGALPYFSEMVGYDGPIYMTQPTQAICPILLEDYRKIAVDKKGEANFFT 122
Query: 137 EQDINRSMDRI 147
Q I M ++
Sbjct: 123 SQMIKDCMKKV 133
>UNIPROTKB|F1RJE8 [details] [associations]
symbol:CPSF3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0016787 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 KO:K13148 OMA:MAVEYMS GeneTree:ENSGT00700000104485
EMBL:FP102596 RefSeq:XP_003127541.3 Ensembl:ENSSSCT00000003708
GeneID:100523908 KEGG:ssc:100523908 Uniprot:F1RJE8
Length = 599
Score = 243 (90.6 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 45/109 (41%), Positives = 67/109 (61%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----ID 77
++ + PLGAG +VGRSC+ +S GK ++ DCG+H +S P F I +D
Sbjct: 3 EIRVTPLGAGQDVGRSCILVSIGGKNVMLDCGMHMGFSDDRRFPDFSYITRHGRLTDFLD 62
Query: 78 VLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS 126
++I+HFHLDH +LPYF E + G ++MT T+AI +LL DY K++
Sbjct: 63 CVIISHFHLDHCGALPYFSEMVGYDGPIYMTQPTQAICPILLEDYRKIA 111
>UNIPROTKB|G3V1S5 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9606
"Homo sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0016787 EMBL:AL139287 EMBL:CH471183 InterPro:IPR022712
InterPro:IPR011108 Pfam:PF10996 SMART:SM01027 KO:K13148 OMA:MAVEYMS
CTD:54973 UniGene:Hs.6449 GeneID:54973 KEGG:hsa:54973
HGNC:HGNC:26052 ChiTaRS:CPSF3L GenomeRNAi:54973
RefSeq:NP_001243385.1 ProteinModelPortal:G3V1S5 SMR:G3V1S5
Ensembl:ENST00000540437 ArrayExpress:G3V1S5 Bgee:G3V1S5
Uniprot:G3V1S5
Length = 606
Score = 239 (89.2 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 48/124 (38%), Positives = 71/124 (57%)
Query: 30 GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----IDVLLITHF 84
GAG +VGRSC+ +S GK ++ DCG+H ++ P F I + +D ++I+HF
Sbjct: 16 GAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHF 75
Query: 85 HLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVS-KVSVEDMLFDEQDINRS 143
HLDH +LPYF E + G ++MTH T+AI +LL DY K++ E F Q I
Sbjct: 76 HLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDC 135
Query: 144 MDRI 147
M ++
Sbjct: 136 MKKV 139
>UNIPROTKB|E9PQF0 [details] [associations]
symbol:CPSF3L "Integrator complex subunit 11" species:9606
"Homo sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 Pfam:PF00753 GO:GO:0016787 EMBL:AL139287
HGNC:HGNC:26052 ChiTaRS:CPSF3L IPI:IPI00982774
ProteinModelPortal:E9PQF0 SMR:E9PQF0 Ensembl:ENST00000498476
ArrayExpress:E9PQF0 Bgee:E9PQF0 Uniprot:E9PQF0
Length = 167
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 42/98 (42%), Positives = 61/98 (62%)
Query: 30 GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSA-----IDVLLITHF 84
GAG +VGRSC+ +S GK ++ DCG+H ++ P F I + +D ++I+HF
Sbjct: 70 GAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHF 129
Query: 85 HLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDY 122
HLDH +LPYF E + G ++MTH T+AI +LL DY
Sbjct: 130 HLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDY 167
>TAIR|locus:2065368 [details] [associations]
symbol:CPSF73-II "AT2G01730" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0010197 "polar nucleus
fusion" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001279 Pfam:PF00753
SMART:SM00849 Pfam:PF07521 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006397 GO:GO:0090305 EMBL:AC006069
GO:GO:0004518 GO:GO:0010197 eggNOG:COG1236 InterPro:IPR022712
InterPro:IPR011108 Pfam:PF10996 SMART:SM01027 EMBL:AY168923
EMBL:AK221561 IPI:IPI00536069 PIR:D84428 RefSeq:NP_178282.2
UniGene:At.42473 ProteinModelPortal:Q8GUU3 SMR:Q8GUU3 IntAct:Q8GUU3
STRING:Q8GUU3 PaxDb:Q8GUU3 PRIDE:Q8GUU3 EnsemblPlants:AT2G01730.1
GeneID:814702 KEGG:ath:AT2G01730 TAIR:At2g01730
HOGENOM:HOG000231294 InParanoid:Q56XW2 KO:K13148 OMA:MAVEYMS
Genevestigator:Q8GUU3 Uniprot:Q8GUU3
Length = 613
Score = 237 (88.5 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 51/126 (40%), Positives = 73/126 (57%)
Query: 29 LGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPS-----AIDVLLITH 83
LGAG E+G+SCV ++ GK I+FDCG+H P F I S AI ++ITH
Sbjct: 8 LGAGQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAISCIIITH 67
Query: 84 FHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDY--VKVSKVSVEDMLFDEQDIN 141
FH+DH +LPYF E ++G ++M++ TKA+ L+L DY V V + E+ LF I
Sbjct: 68 FHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEE-LFTTTHIA 126
Query: 142 RSMDRI 147
M ++
Sbjct: 127 NCMKKV 132
>GENEDB_PFALCIPARUM|PFC0825c [details] [associations]
symbol:PFC0825c "cleavage and polyadenylation
specificity factor protein, putative" species:5833 "Plasmodium
falciparum" [GO:0006379 "mRNA cleavage" evidence=ISS] [GO:0006378
"mRNA polyadenylation" evidence=ISS] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] InterPro:IPR001279
SMART:SM00849 Pfam:PF07521 GO:GO:0003729 GO:GO:0016787
EMBL:AL844502 GO:GO:0005847 InterPro:IPR022712 InterPro:IPR011108
Pfam:PF10996 SMART:SM01027 KO:K13148 PIR:T18488
RefSeq:XP_001351256.1 ProteinModelPortal:O77371 PRIDE:O77371
EnsemblProtists:PFC0825c:mRNA GeneID:814500 KEGG:pfa:PFC0825c
EuPathDB:PlasmoDB:PF3D7_0318600 HOGENOM:HOG000283200
ProtClustDB:CLSZ2433497 Uniprot:O77371
Length = 1017
Score = 133 (51.9 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 76 IDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLF 135
ID ++I+HFH+DH +LP+F E + G + M++ TKA+ +LL D +V+ + E F
Sbjct: 170 IDCVIISHFHMDHIGALPFFTEILKYRGIILMSYPTKALSPILLLDSCRVTDMKWEKKNF 229
Query: 136 DEQD--INRSMDRIEVCFLSC 154
+ Q +N D + ++C
Sbjct: 230 ERQIKMLNEKSDELLNYNINC 250
Score = 102 (41.0 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFD 69
++ I LGAG VGRSCV + + + ++FDCG H Y P F+
Sbjct: 8 KIIIQVLGAGQTVGRSCVIVELENRKVMFDCGCHLGYKDERKYPNFN 54
>UNIPROTKB|O77371 [details] [associations]
symbol:PFC0825c "Cleavage and polyadenylation specificity
factor protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005847 "mRNA cleavage
and polyadenylation specificity factor complex" evidence=ISS]
InterPro:IPR001279 SMART:SM00849 Pfam:PF07521 GO:GO:0003729
GO:GO:0016787 EMBL:AL844502 GO:GO:0005847 InterPro:IPR022712
InterPro:IPR011108 Pfam:PF10996 SMART:SM01027 KO:K13148 PIR:T18488
RefSeq:XP_001351256.1 ProteinModelPortal:O77371 PRIDE:O77371
EnsemblProtists:PFC0825c:mRNA GeneID:814500 KEGG:pfa:PFC0825c
EuPathDB:PlasmoDB:PF3D7_0318600 HOGENOM:HOG000283200
ProtClustDB:CLSZ2433497 Uniprot:O77371
Length = 1017
Score = 133 (51.9 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 76 IDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLF 135
ID ++I+HFH+DH +LP+F E + G + M++ TKA+ +LL D +V+ + E F
Sbjct: 170 IDCVIISHFHMDHIGALPFFTEILKYRGIILMSYPTKALSPILLLDSCRVTDMKWEKKNF 229
Query: 136 DEQD--INRSMDRIEVCFLSC 154
+ Q +N D + ++C
Sbjct: 230 ERQIKMLNEKSDELLNYNINC 250
Score = 102 (41.0 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFD 69
++ I LGAG VGRSCV + + + ++FDCG H Y P F+
Sbjct: 8 KIIIQVLGAGQTVGRSCVIVELENRKVMFDCGCHLGYKDERKYPNFN 54
>UNIPROTKB|H0YBH8 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9606
"Homo sapiens" [GO:0016180 "snRNA processing" evidence=IEA]
[GO:0032039 "integrator complex" evidence=IEA] InterPro:IPR027074
PANTHER:PTHR11203:SF2 EMBL:AC040975 EMBL:AC131969 HGNC:HGNC:25592
ChiTaRS:INTS9 Ensembl:ENST00000524081 Uniprot:H0YBH8
Length = 223
Score = 119 (46.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 29/85 (34%), Positives = 48/85 (56%)
Query: 65 LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVK 124
LP + ID S +DV+LI+++H A LPY E T F+G V+ T T I +LL +
Sbjct: 77 LPETELIDLSTVDVILISNYHCMMA--LPYITEHTGFTGTVYATEPTVQIGRLLPSPLKD 134
Query: 125 VSKVSVEDMLFDEQDINRSMDRIEV 149
+VS + Q++N ++ +I++
Sbjct: 135 AVEVSTWRRCYTMQEVNSALSKIQL 159
Score = 48 (22.0 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 39 CVYMSYKGKTILFDCGI 55
C + +K TI+ DCG+
Sbjct: 6 CNVLKFKSTTIMLDCGL 22
>UNIPROTKB|E5RK47 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9606
"Homo sapiens" [GO:0016180 "snRNA processing" evidence=IEA]
[GO:0032039 "integrator complex" evidence=IEA] InterPro:IPR027074
PANTHER:PTHR11203:SF2 EMBL:AC040975 EMBL:AC131969 HGNC:HGNC:25592
ChiTaRS:INTS9 IPI:IPI00976000 ProteinModelPortal:E5RK47 SMR:E5RK47
Ensembl:ENST00000518510 ArrayExpress:E5RK47 Bgee:E5RK47
Uniprot:E5RK47
Length = 170
Score = 114 (45.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 31/82 (37%), Positives = 47/82 (57%)
Query: 65 LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVK 124
LP + ID S +DV+LI+++H A LPY E T F+G V+ T T I +LL+ + V
Sbjct: 85 LPETELIDLSTVDVILISNYHCMMA--LPYITEHTGFTGTVYATEPTVQIGRLLMEELVN 142
Query: 125 -VSKV--SVEDMLFDEQDINRS 143
+ +V + L+ +DI RS
Sbjct: 143 FIERVPKAQSASLWKNKDIQRS 164
Score = 48 (22.0 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 39 CVYMSYKGKTILFDCGI 55
C + +K TI+ DCG+
Sbjct: 14 CNVLKFKSTTIMLDCGL 30
>UNIPROTKB|Q8EJC6 [details] [associations]
symbol:SO_0541 "RNA-metabolizing metallo-beta-lactamase
family protein" species:211586 "Shewanella oneidensis MR-1"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001279
Pfam:PF00753 SMART:SM00849 Pfam:PF07521 GO:GO:0016787 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR022712 InterPro:IPR011108
Pfam:PF10996 SMART:SM01027 OMA:MAVEYMS HOGENOM:HOG000244774
KO:K07576 RefSeq:NP_716177.2 ProteinModelPortal:Q8EJC6
DNASU:1168409 GeneID:1168409 KEGG:son:SO_0541 PATRIC:23520762
ProtClustDB:CLSK2516780 Uniprot:Q8EJC6
Length = 480
Score = 135 (52.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMA-ALPYFDEI--DPSAIDVL 79
Q+T+ LGA EV SC ++ GK +L DCG+ G A L + DP I +
Sbjct: 2 QMTLQFLGAAREVTGSCHLVTVAGKHLLLDCGL--IQGGKADELRNHEPFVFDPQTIVAV 59
Query: 80 LITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTD 121
+++H H+DH+ LP L K F G ++ AT + ++L D
Sbjct: 60 VLSHAHIDHSGRLP-LLVKAGFDGPIYTHKATAELCAIMLKD 100
>TIGR_CMR|SO_0541 [details] [associations]
symbol:SO_0541 "metallo-beta-lactamase family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003824 "catalytic activity"
evidence=ISS] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 GO:GO:0016787 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
OMA:MAVEYMS HOGENOM:HOG000244774 KO:K07576 RefSeq:NP_716177.2
ProteinModelPortal:Q8EJC6 DNASU:1168409 GeneID:1168409
KEGG:son:SO_0541 PATRIC:23520762 ProtClustDB:CLSK2516780
Uniprot:Q8EJC6
Length = 480
Score = 135 (52.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMA-ALPYFDEI--DPSAIDVL 79
Q+T+ LGA EV SC ++ GK +L DCG+ G A L + DP I +
Sbjct: 2 QMTLQFLGAAREVTGSCHLVTVAGKHLLLDCGL--IQGGKADELRNHEPFVFDPQTIVAV 59
Query: 80 LITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTD 121
+++H H+DH+ LP L K F G ++ AT + ++L D
Sbjct: 60 VLSHAHIDHSGRLP-LLVKAGFDGPIYTHKATAELCAIMLKD 100
>TIGR_CMR|CHY_2049 [details] [associations]
symbol:CHY_2049 "metallo-beta-lactamase family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001279 Pfam:PF00753
SMART:SM00849 Pfam:PF07521 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0016787 eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108
Pfam:PF10996 SMART:SM01027 RefSeq:YP_360868.1
ProteinModelPortal:Q3AAG6 STRING:Q3AAG6 GeneID:3728507
KEGG:chy:CHY_2049 PATRIC:21277179 HOGENOM:HOG000244774 KO:K07576
OMA:GGRIVHH BioCyc:CHYD246194:GJCN-2048-MONOMER Uniprot:Q3AAG6
Length = 504
Score = 133 (51.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 30/103 (29%), Positives = 51/103 (49%)
Query: 30 GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFD-EIDPSAIDVLLITHFHLDH 88
GA + V SC + G L DCG+ + Y + +P I+ +L+TH H+DH
Sbjct: 7 GAADTVTGSCYLFNVAGHKFLVDCGLFQGPKAIKERNYGEFPFNPREIEFILLTHAHIDH 66
Query: 89 AASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVE 131
+ +P ++K F G ++ T T + ++L D V ++ VE
Sbjct: 67 SGLIPKLVKKG-FKGTIYATEPTVDLAAVMLPDSGHVQEMEVE 108
>UNIPROTKB|Q81SC3 [details] [associations]
symbol:BA_1737 "Metallo-beta-lactamase family protein"
species:1392 "Bacillus anthracis" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 SMART:SM00849 Pfam:PF07521
EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0016787 InterPro:IPR022712
InterPro:IPR011108 Pfam:PF10996 SMART:SM01027 RefSeq:NP_844172.1
RefSeq:YP_018378.1 ProteinModelPortal:Q81SC3 IntAct:Q81SC3
DNASU:1086535 EnsemblBacteria:EBBACT00000009201
EnsemblBacteria:EBBACT00000014472 GeneID:1086535 GeneID:2817971
KEGG:ban:BA_1737 KEGG:bar:GBAA_1737 PATRIC:18781074
HOGENOM:HOG000087450 OMA:SQHERVN ProtClustDB:CLSK2516952
BioCyc:BANT261594:GJ7F-1754-MONOMER Uniprot:Q81SC3
Length = 419
Score = 129 (50.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 30 GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFD-EIDPSAIDVLLITHFHLDH 88
GAG E GRSC ++ K ILFDCGI+ +Y + P + E+ P ++ + ++H H DH
Sbjct: 8 GAG-EYGRSCYFVKNKETKILFDCGINRSYED--SYPKIEREVVPF-LEAVFLSHIHEDH 63
Query: 89 AASLPYFLEKTTFSGRVFMTHATK 112
LP L K + +++ T TK
Sbjct: 64 TMGLP-LLAKYGYKKKIWTTRYTK 86
>TIGR_CMR|BA_1737 [details] [associations]
symbol:BA_1737 "metallo-beta-lactamase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 SMART:SM00849 Pfam:PF07521
EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0016787 InterPro:IPR022712
InterPro:IPR011108 Pfam:PF10996 SMART:SM01027 RefSeq:NP_844172.1
RefSeq:YP_018378.1 ProteinModelPortal:Q81SC3 IntAct:Q81SC3
DNASU:1086535 EnsemblBacteria:EBBACT00000009201
EnsemblBacteria:EBBACT00000014472 GeneID:1086535 GeneID:2817971
KEGG:ban:BA_1737 KEGG:bar:GBAA_1737 PATRIC:18781074
HOGENOM:HOG000087450 OMA:SQHERVN ProtClustDB:CLSK2516952
BioCyc:BANT261594:GJ7F-1754-MONOMER Uniprot:Q81SC3
Length = 419
Score = 129 (50.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 30 GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFD-EIDPSAIDVLLITHFHLDH 88
GAG E GRSC ++ K ILFDCGI+ +Y + P + E+ P ++ + ++H H DH
Sbjct: 8 GAG-EYGRSCYFVKNKETKILFDCGINRSYED--SYPKIEREVVPF-LEAVFLSHIHEDH 63
Query: 89 AASLPYFLEKTTFSGRVFMTHATK 112
LP L K + +++ T TK
Sbjct: 64 TMGLP-LLAKYGYKKKIWTTRYTK 86
>TIGR_CMR|DET_1061 [details] [associations]
symbol:DET_1061 "metallo-beta-lactamase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 GO:GO:0016787 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 OMA:MAVEYMS HOGENOM:HOG000244774 KO:K07576
RefSeq:YP_181776.1 ProteinModelPortal:Q3Z7M3 STRING:Q3Z7M3
GeneID:3229629 KEGG:det:DET1061 PATRIC:21609167
ProtClustDB:CLSK2516599 BioCyc:DETH243164:GJNF-1062-MONOMER
Uniprot:Q3Z7M3
Length = 468
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 37/112 (33%), Positives = 54/112 (48%)
Query: 29 LGAGNEVGRSCVYMSYKGKTILFDCGIHPA--YSGMAALPYFDEIDPSAIDVLLITHFHL 86
LGA V S + +L DCG++ P+ EI P ++ ++I+H H+
Sbjct: 8 LGAARNVTGSRYLIKTDHTQLLVDCGLYQERRLQDRNWQPF--EIPPQSLSAVIISHAHI 65
Query: 87 DHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQ 138
DH LP L K F+G VF T AT I ++ LTD K+ ED F ++
Sbjct: 66 DHCGLLPK-LVKEGFAGPVFATEATAEIARISLTD---AGKLQEEDAAFKKK 113
>UNIPROTKB|E5RG70 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9606
"Homo sapiens" [GO:0016180 "snRNA processing" evidence=IEA]
[GO:0032039 "integrator complex" evidence=IEA] InterPro:IPR027074
PANTHER:PTHR11203:SF2 EMBL:AC040975 EMBL:AC131969 HGNC:HGNC:25592
ChiTaRS:INTS9 IPI:IPI00974179 ProteinModelPortal:E5RG70 SMR:E5RG70
Ensembl:ENST00000523436 ArrayExpress:E5RG70 Bgee:E5RG70
Uniprot:E5RG70
Length = 300
Score = 110 (43.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 65 LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVK 124
LP + ID S +DV+LI+++H A LPY E T F+G V+ T T I +LL+ + V
Sbjct: 85 LPETELIDLSTVDVILISNYHCMMA--LPYITEHTGFTGTVYATEPTVQIGRLLMEELVN 142
Query: 125 -VSKV--SVEDMLFDEQDINR 142
+ +V + L+ +DI R
Sbjct: 143 FIERVPKAQSASLWKNKDIQR 163
Score = 48 (22.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 39 CVYMSYKGKTILFDCGI 55
C + +K TI+ DCG+
Sbjct: 14 CNVLKFKSTTIMLDCGL 30
>TIGR_CMR|CPS_2623 [details] [associations]
symbol:CPS_2623 "metallo-beta-lactamase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 GO:GO:0016787 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG1236 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 HOGENOM:HOG000244774 KO:K07576 RefSeq:YP_269337.1
ProteinModelPortal:Q481D2 STRING:Q481D2 GeneID:3521490
KEGG:cps:CPS_2623 PATRIC:21468305 OMA:HGPMVII
ProtClustDB:CLSK2524370 BioCyc:CPSY167879:GI48-2685-MONOMER
Uniprot:Q481D2
Length = 451
Score = 121 (47.7 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 24 LTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFD-EIDPSAIDVLLIT 82
+ I LG V S ++ IL DCG++ Y + A +D ++D +++T
Sbjct: 1 MNITFLGGTGTVTGSKYFVETSTTKILVDCGLYQGYKWLRARNREPLPLDLKSLDAIVLT 60
Query: 83 HFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTD 121
H HLDH+ +P L K F G V+ AT ++ +LL D
Sbjct: 61 HAHLDHSGFIPA-LYKQGFRGHVYAHQATISLCSILLPD 98
>UNIPROTKB|Q9KV92 [details] [associations]
symbol:VC_0264 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0016787
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
KO:K07576 OMA:CHIDHVG PIR:F82345 RefSeq:NP_229920.1
ProteinModelPortal:Q9KV92 DNASU:2614470 GeneID:2614470
KEGG:vch:VC0264 PATRIC:20079570 ProtClustDB:CLSK2517501
Uniprot:Q9KV92
Length = 455
Score = 121 (47.7 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 29/104 (27%), Positives = 49/104 (47%)
Query: 22 DQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLI 81
+ + ++ G V SC + G+ +L DCG+ + G P E +D L++
Sbjct: 16 NNMEVVHHGGKASVTGSCHELRADGQALLIDCGL---FQGADERPLAVEFALGHVDALIL 72
Query: 82 THFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKV 125
TH H+DH LP+ L ++ T AT + L+L D +K+
Sbjct: 73 THAHIDHIGRLPWLLA-AGLKQPIYSTAATAELVPLMLEDGLKL 115
>TIGR_CMR|VC_0264 [details] [associations]
symbol:VC_0264 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001279
Pfam:PF00753 SMART:SM00849 Pfam:PF07521 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0016787 InterPro:IPR022712
InterPro:IPR011108 Pfam:PF10996 SMART:SM01027 KO:K07576 OMA:CHIDHVG
PIR:F82345 RefSeq:NP_229920.1 ProteinModelPortal:Q9KV92
DNASU:2614470 GeneID:2614470 KEGG:vch:VC0264 PATRIC:20079570
ProtClustDB:CLSK2517501 Uniprot:Q9KV92
Length = 455
Score = 121 (47.7 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 29/104 (27%), Positives = 49/104 (47%)
Query: 22 DQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLI 81
+ + ++ G V SC + G+ +L DCG+ + G P E +D L++
Sbjct: 16 NNMEVVHHGGKASVTGSCHELRADGQALLIDCGL---FQGADERPLAVEFALGHVDALIL 72
Query: 82 THFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKV 125
TH H+DH LP+ L ++ T AT + L+L D +K+
Sbjct: 73 THAHIDHIGRLPWLLA-AGLKQPIYSTAATAELVPLMLEDGLKL 115
>UNIPROTKB|G3XAN1 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9606
"Homo sapiens" [GO:0016180 "snRNA processing" evidence=IEA]
[GO:0032039 "integrator complex" evidence=IEA] InterPro:IPR027074
EMBL:CH471080 InterPro:IPR022712 Pfam:PF10996 SMART:SM01027
PANTHER:PTHR11203:SF2 EMBL:AC040975 EMBL:AC131969 UniGene:Hs.162397
HGNC:HGNC:25592 ChiTaRS:INTS9 ProteinModelPortal:G3XAN1
Ensembl:ENST00000523303 ArrayExpress:G3XAN1 Bgee:G3XAN1
Uniprot:G3XAN1
Length = 525
Score = 110 (43.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 65 LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVK 124
LP + ID S +DV+LI+++H A LPY E T F+G V+ T T I +LL+ + V
Sbjct: 85 LPETELIDLSTVDVILISNYHCMMA--LPYITEHTGFTGTVYATEPTVQIGRLLMEELVN 142
Query: 125 -VSKV--SVEDMLFDEQDINR 142
+ +V + L+ +DI R
Sbjct: 143 FIERVPKAQSASLWKNKDIQR 163
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 39 CVYMSYKGKTILFDCGI 55
C + +K TI+ DCG+
Sbjct: 14 CNVLKFKSTTIMLDCGL 30
>MGI|MGI:1098533 [details] [associations]
symbol:Ints9 "integrator complex subunit 9" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016180 "snRNA processing"
evidence=ISO] [GO:0032039 "integrator complex" evidence=ISO]
InterPro:IPR027074 MGI:MGI:1098533 eggNOG:COG1236
InterPro:IPR022712 Pfam:PF10996 SMART:SM01027 GO:GO:0032039
GO:GO:0016180 CTD:55756 HOGENOM:HOG000045359 HOVERGEN:HBG081802
KO:K13146 OrthoDB:EOG415GCW PANTHER:PTHR11203:SF2
GeneTree:ENSGT00390000001445 EMBL:AK038979 EMBL:AK077634
EMBL:AK136992 EMBL:AK150195 EMBL:BC028953 EMBL:BC055700
IPI:IPI00223422 IPI:IPI00406798 RefSeq:NP_001240660.1
RefSeq:NP_700463.2 UniGene:Mm.71332 ProteinModelPortal:Q8K114
SMR:Q8K114 STRING:Q8K114 PhosphoSite:Q8K114 PaxDb:Q8K114
PRIDE:Q8K114 Ensembl:ENSMUST00000043914 GeneID:210925
KEGG:mmu:210925 UCSC:uc007uiv.1 UCSC:uc007uiw.1 InParanoid:Q8K114
NextBio:373083 Bgee:Q8K114 CleanEx:MM_INTS9 Genevestigator:Q8K114
Uniprot:Q8K114
Length = 658
Score = 111 (44.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 65 LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVK 124
LP + ID S +DV+LI+++H A LPY E T F+G V+ T T I +LL+ + V
Sbjct: 85 LPETELIDLSTVDVILISNYHCMMA--LPYITEHTGFTGTVYATEPTMQIGRLLMEELVN 142
Query: 125 -VSKV--SVEDMLFDEQDINR 142
+ +V + L+ +DI R
Sbjct: 143 FIERVPKAQSASLWKNKDIQR 163
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 39 CVYMSYKGKTILFDCGI 55
C + +K TI+ DCG+
Sbjct: 14 CNVLKFKSTTIMLDCGL 30
>UNIPROTKB|F1MMA6 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9913
"Bos taurus" [GO:0032039 "integrator complex" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] InterPro:IPR027074
InterPro:IPR022712 Pfam:PF10996 SMART:SM01027 GO:GO:0032039
GO:GO:0016180 IPI:IPI00701634 UniGene:Bt.91042
PANTHER:PTHR11203:SF2 GeneTree:ENSGT00390000001445 OMA:PLAMKCV
EMBL:DAAA02021965 EMBL:DAAA02021964 Ensembl:ENSBTAT00000049079
ArrayExpress:F1MMA6 Uniprot:F1MMA6
Length = 658
Score = 110 (43.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 65 LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVK 124
LP + ID S +DV+LI+++H A LPY E T F+G V+ T T I +LL+ + V
Sbjct: 85 LPETELIDLSTVDVILISNYHCMMA--LPYITEHTGFTGTVYATEPTVQIGRLLMEELVN 142
Query: 125 -VSKV--SVEDMLFDEQDINR 142
+ +V + L+ +DI R
Sbjct: 143 FIERVPKAQSASLWKNKDIQR 163
Score = 48 (22.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 39 CVYMSYKGKTILFDCGI 55
C + +K TI+ DCG+
Sbjct: 14 CNVLKFKSTTIMLDCGL 30
>UNIPROTKB|Q2KJA6 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9913
"Bos taurus" [GO:0032039 "integrator complex" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] InterPro:IPR027074
GO:GO:0005634 eggNOG:COG1236 InterPro:IPR022712 Pfam:PF10996
SMART:SM01027 EMBL:BC105437 IPI:IPI00701634 RefSeq:NP_001039828.1
UniGene:Bt.91042 ProteinModelPortal:Q2KJA6 STRING:Q2KJA6
GeneID:533964 KEGG:bta:533964 CTD:55756 HOGENOM:HOG000045359
HOVERGEN:HBG081802 InParanoid:Q2KJA6 KO:K13146 OrthoDB:EOG415GCW
NextBio:20876211 PANTHER:PTHR11203:SF2 Uniprot:Q2KJA6
Length = 658
Score = 110 (43.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 65 LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVK 124
LP + ID S +DV+LI+++H A LPY E T F+G V+ T T I +LL+ + V
Sbjct: 85 LPETELIDLSTVDVILISNYHCMMA--LPYITEHTGFTGTVYATEPTVQIGRLLMEELVN 142
Query: 125 -VSKV--SVEDMLFDEQDINR 142
+ +V + L+ +DI R
Sbjct: 143 FIERVPKAQSASLWKNKDIQR 163
Score = 48 (22.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 39 CVYMSYKGKTILFDCGI 55
C + +K TI+ DCG+
Sbjct: 14 CNVLKFKSTTIMLDCGL 30
>UNIPROTKB|F6XI08 [details] [associations]
symbol:INTS9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032039 "integrator complex" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] InterPro:IPR027074
InterPro:IPR022712 Pfam:PF10996 SMART:SM01027 CTD:55756 KO:K13146
PANTHER:PTHR11203:SF2 GeneTree:ENSGT00390000001445 OMA:PLAMKCV
Ensembl:ENSCAFT00000013124 EMBL:AAEX03014336 RefSeq:XP_543216.2
GeneID:486090 KEGG:cfa:486090 Uniprot:F6XI08
Length = 658
Score = 110 (43.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 65 LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVK 124
LP + ID S +DV+LI+++H A LPY E T F+G V+ T T I +LL+ + V
Sbjct: 85 LPETELIDLSTVDVILISNYHCMMA--LPYITEHTGFTGTVYATEPTVQIGRLLMEELVN 142
Query: 125 -VSKV--SVEDMLFDEQDINR 142
+ +V + L+ +DI R
Sbjct: 143 FIERVPKAQSASLWKNKDIQR 163
Score = 48 (22.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 39 CVYMSYKGKTILFDCGI 55
C + +K TI+ DCG+
Sbjct: 14 CNVLKFKSTTIMLDCGL 30
>UNIPROTKB|Q9NV88 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9606
"Homo sapiens" [GO:0005515 "protein binding" evidence=IPI]
[GO:0016180 "snRNA processing" evidence=IDA] [GO:0032039
"integrator complex" evidence=IDA] InterPro:IPR027074
eggNOG:COG1236 InterPro:IPR022712 Pfam:PF10996 SMART:SM01027
GO:GO:0032039 EMBL:U96629 GO:GO:0016180 CTD:55756
HOGENOM:HOG000045359 HOVERGEN:HBG081802 KO:K13146 OrthoDB:EOG415GCW
PANTHER:PTHR11203:SF2 OMA:PLAMKCV EMBL:AK001733 EMBL:AK298468
EMBL:AK300593 EMBL:AC040975 EMBL:AC131969 EMBL:BC025267
EMBL:BK005726 EMBL:BK005674 IPI:IPI00290514 IPI:IPI00871167
RefSeq:NP_001138631.1 RefSeq:NP_001166033.1 RefSeq:NP_060720.2
UniGene:Hs.162397 ProteinModelPortal:Q9NV88 SMR:Q9NV88
IntAct:Q9NV88 STRING:Q9NV88 PhosphoSite:Q9NV88 DMDM:119371246
PaxDb:Q9NV88 PRIDE:Q9NV88 DNASU:55756 Ensembl:ENST00000416984
Ensembl:ENST00000521022 Ensembl:ENST00000521777 GeneID:55756
KEGG:hsa:55756 UCSC:uc003xha.3 GeneCards:GC08M028625
HGNC:HGNC:25592 MIM:611352 neXtProt:NX_Q9NV88 PharmGKB:PA162392192
InParanoid:Q9NV88 PhylomeDB:Q9NV88 ChiTaRS:INTS9 GenomeRNAi:55756
NextBio:60763 ArrayExpress:Q9NV88 Bgee:Q9NV88 CleanEx:HS_INTS9
Genevestigator:Q9NV88 GermOnline:ENSG00000104299 Uniprot:Q9NV88
Length = 658
Score = 110 (43.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 65 LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVK 124
LP + ID S +DV+LI+++H A LPY E T F+G V+ T T I +LL+ + V
Sbjct: 85 LPETELIDLSTVDVILISNYHCMMA--LPYITEHTGFTGTVYATEPTVQIGRLLMEELVN 142
Query: 125 -VSKV--SVEDMLFDEQDINR 142
+ +V + L+ +DI R
Sbjct: 143 FIERVPKAQSASLWKNKDIQR 163
Score = 48 (22.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 39 CVYMSYKGKTILFDCGI 55
C + +K TI+ DCG+
Sbjct: 14 CNVLKFKSTTIMLDCGL 30
>UNIPROTKB|Q81SK8 [details] [associations]
symbol:BA_1640 "Ribonuclease J" species:1392 "Bacillus
anthracis" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001279 InterPro:IPR001587 InterPro:IPR004613
Pfam:PF00753 PIRSF:PIRSF004803 PROSITE:PS01292 SMART:SM00849
Pfam:PF07521 GO:GO:0046872 EMBL:AE016879 GenomeReviews:AE016879_GR
GO:GO:0003723 GO:GO:0016788 InterPro:IPR011108 HOGENOM:HOG000280201
KO:K12574 PANTHER:PTHR11203:SF22 TIGRFAMs:TIGR00649
RefSeq:NP_844087.1 ProteinModelPortal:Q81SK8 DNASU:1086943
EnsemblBacteria:EBBACT00000008733 GeneID:1086943 KEGG:ban:BA_1640
PATRIC:18780866 ProtClustDB:CLSK916310 Uniprot:Q81SK8
Length = 549
Score = 118 (46.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 22 DQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIH-PAYS--GM-AALP---YFDEIDPS 74
+ L+I+ LG NE+G++ + Y+ ++ DCG P S G+ +P Y E +
Sbjct: 6 NNLSIVALGGVNEIGKNMYAIQYENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQE-NKE 64
Query: 75 AIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDY 122
I L++TH H DH +PYFL++ ++ T T + ++ L ++
Sbjct: 65 KIRGLVVTHGHEDHIGGIPYFLKQLNVP--IYATRLTLGLIEIKLKEH 110
>TIGR_CMR|BA_1640 [details] [associations]
symbol:BA_1640 "metallo-beta-lactamase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 InterPro:IPR001587
InterPro:IPR004613 Pfam:PF00753 PIRSF:PIRSF004803 PROSITE:PS01292
SMART:SM00849 Pfam:PF07521 GO:GO:0046872 EMBL:AE016879
GenomeReviews:AE016879_GR GO:GO:0003723 GO:GO:0016788
InterPro:IPR011108 HOGENOM:HOG000280201 KO:K12574
PANTHER:PTHR11203:SF22 TIGRFAMs:TIGR00649 RefSeq:NP_844087.1
ProteinModelPortal:Q81SK8 DNASU:1086943
EnsemblBacteria:EBBACT00000008733 GeneID:1086943 KEGG:ban:BA_1640
PATRIC:18780866 ProtClustDB:CLSK916310 Uniprot:Q81SK8
Length = 549
Score = 118 (46.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 22 DQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIH-PAYS--GM-AALP---YFDEIDPS 74
+ L+I+ LG NE+G++ + Y+ ++ DCG P S G+ +P Y E +
Sbjct: 6 NNLSIVALGGVNEIGKNMYAIQYENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQE-NKE 64
Query: 75 AIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDY 122
I L++TH H DH +PYFL++ ++ T T + ++ L ++
Sbjct: 65 KIRGLVVTHGHEDHIGGIPYFLKQLNVP--IYATRLTLGLIEIKLKEH 110
>TIGR_CMR|NSE_0829 [details] [associations]
symbol:NSE_0829 "metallo-beta-lactamase family, beta-CASP
subfamily" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0016070 "RNA
metabolic process" evidence=ISS] InterPro:IPR001279
InterPro:IPR004613 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
GO:GO:0016787 EMBL:CP000237 GenomeReviews:CP000237_GR
InterPro:IPR011108 eggNOG:COG0595 PANTHER:PTHR11203:SF22
HOGENOM:HOG000280200 RefSeq:YP_506699.1 ProteinModelPortal:Q2GCU7
STRING:Q2GCU7 GeneID:3931644 KEGG:nse:NSE_0829 PATRIC:22681653
KO:K07021 OMA:MRDDDKL ProtClustDB:CLSK2528128
BioCyc:NSEN222891:GHFU-835-MONOMER Uniprot:Q2GCU7
Length = 542
Score = 117 (46.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 22 DQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEI--DPSAID-- 77
+ L +PLG E+G + YKG+ I+ DCG A A LP D + D S I+
Sbjct: 4 NNLIFLPLGGTGEIGMNVTLYGYKGRWIMIDCG---AGFADAELPGIDIVVADISFIEER 60
Query: 78 -----VLLITHFHLDHAASLPYFLEK 98
++ITH H DH +LPY ++
Sbjct: 61 KDDLLAIIITHIHEDHCGALPYLWDR 86
>RGD|1311539 [details] [associations]
symbol:Ints9 "integrator complex subunit 9" species:10116
"Rattus norvegicus" [GO:0016180 "snRNA processing"
evidence=IEA;ISO] [GO:0032039 "integrator complex"
evidence=IEA;ISO] InterPro:IPR027074 RGD:1311539 InterPro:IPR022712
Pfam:PF10996 SMART:SM01027 GO:GO:0032039 GO:GO:0016180
PANTHER:PTHR11203:SF2 GeneTree:ENSGT00390000001445 IPI:IPI00362364
Ensembl:ENSRNOT00000018071 Uniprot:F1M365
Length = 659
Score = 107 (42.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 65 LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVK 124
LP + ID S +DV+LI+++H A LPY E T F+G V+ T T I +LL+ + V
Sbjct: 86 LPETELIDLSTVDVILISNYHCMMA--LPYITEHTGFTGTVYATEPTMQIGRLLMEELVN 143
Query: 125 -VSKV--SVEDMLFDEQDINR 142
+ +V + L+ ++I R
Sbjct: 144 FIERVPKAQSASLWKNKEIQR 164
Score = 48 (22.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 39 CVYMSYKGKTILFDCGI 55
C + +K TI+ DCG+
Sbjct: 15 CNVLKFKSTTIMLDCGL 31
>TIGR_CMR|CHY_1157 [details] [associations]
symbol:CHY_1157 "metallo-beta-lactamase family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001279
InterPro:IPR004613 Pfam:PF00753 PIRSF:PIRSF004803 SMART:SM00849
Pfam:PF07521 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0003723 GO:GO:0016788 InterPro:IPR011108 eggNOG:COG0595
HOGENOM:HOG000280201 KO:K12574 PANTHER:PTHR11203:SF22
TIGRFAMs:TIGR00649 RefSeq:YP_360002.1 ProteinModelPortal:Q3ACY2
STRING:Q3ACY2 GeneID:3726430 KEGG:chy:CHY_1157 PATRIC:21275454
OMA:FLVDSTN BioCyc:CHYD246194:GJCN-1156-MONOMER Uniprot:Q3ACY2
Length = 554
Score = 112 (44.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 15 VPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGI-HPAYS--GM-AALP---Y 67
+P+ ++G +L IIPLG E+G++ + + Y I+ D G+ P G+ +P Y
Sbjct: 1 MPI-KDG-RLQIIPLGGLGEIGKNMMVIKYNDAIIVIDAGLMFPEEELLGIDMVIPDMSY 58
Query: 68 FDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTD 121
E + + +L+TH H DH +PYFL++ F V+ T T + L +
Sbjct: 59 LIE-NKEKVKAVLLTHGHEDHIGGMPYFLKQ--FDVPVYGTRLTLGLLSAKLKE 109
>ZFIN|ZDB-GENE-061013-129 [details] [associations]
symbol:ints9 "integrator complex subunit 9"
species:7955 "Danio rerio" [GO:0016180 "snRNA processing"
evidence=IEA] [GO:0032039 "integrator complex" evidence=IEA]
InterPro:IPR027074 ZFIN:ZDB-GENE-061013-129 eggNOG:COG1236
InterPro:IPR022712 Pfam:PF10996 SMART:SM01027 CTD:55756
HOGENOM:HOG000045359 HOVERGEN:HBG081802 KO:K13146 OrthoDB:EOG415GCW
PANTHER:PTHR11203:SF2 GeneTree:ENSGT00390000001445
EMBL:CABZ01076623 EMBL:CABZ01078246 EMBL:CABZ01078247
EMBL:CABZ01078248 EMBL:CABZ01078249 EMBL:BC124793 IPI:IPI00800641
RefSeq:NP_001070738.1 UniGene:Dr.116109 Ensembl:ENSDART00000097865
GeneID:768124 KEGG:dre:768124 InParanoid:Q08BB6 NextBio:20918446
Uniprot:Q08BB6
Length = 658
Score = 103 (41.3 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 65 LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYV 123
LP + +D S IDV+LI+++H A LPY E T F+G V+ T T I +LL+ + V
Sbjct: 85 LPEKELLDLSTIDVILISNYHCMMA--LPYITEHTGFTGTVYATEPTLQIGRLLMEELV 141
Score = 48 (22.0 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 39 CVYMSYKGKTILFDCGI 55
C + +K TI+ DCG+
Sbjct: 14 CNVLKFKSTTIMLDCGL 30
>UNIPROTKB|Q5ZKK2 [details] [associations]
symbol:INTS9 "Integrator complex subunit 9" species:9031
"Gallus gallus" [GO:0016180 "snRNA processing" evidence=IEA]
[GO:0032039 "integrator complex" evidence=IEA] InterPro:IPR027074
eggNOG:COG1236 InterPro:IPR022712 Pfam:PF10996 SMART:SM01027
GO:GO:0032039 GO:GO:0016180 CTD:55756 HOGENOM:HOG000045359
HOVERGEN:HBG081802 KO:K13146 OrthoDB:EOG415GCW
PANTHER:PTHR11203:SF2 EMBL:AJ720082 IPI:IPI00651516
RefSeq:NP_001026271.1 UniGene:Gga.21113 ProteinModelPortal:Q5ZKK2
STRING:Q5ZKK2 Ensembl:ENSGALT00000026848 GeneID:422023
KEGG:gga:422023 GeneTree:ENSGT00390000001445 InParanoid:Q5ZKK2
OMA:PLAMKCV NextBio:20824712 Uniprot:Q5ZKK2
Length = 658
Score = 102 (41.0 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 65 LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYV 123
LP + +D S +DV+LI+++H A LPY E T F+G V+ T T I +LL+ + V
Sbjct: 85 LPETELLDLSTVDVILISNYHCMMA--LPYITEYTGFTGTVYATEPTVQIGRLLMEELV 141
Score = 48 (22.0 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 39 CVYMSYKGKTILFDCGI 55
C + +K TI+ DCG+
Sbjct: 14 CNVLKFKSTTIMLDCGL 30
>WB|WBGene00017313 [details] [associations]
symbol:cpsf-2 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0040027 "negative regulation
of vulval development" evidence=IMP] InterPro:IPR001279
InterPro:IPR027075 SMART:SM00849 Pfam:PF07521 GO:GO:0005634
GO:GO:0009792 GO:GO:0016246 GO:GO:0006397 GO:GO:0003723
GO:GO:0016787 GO:GO:0000910 GO:GO:0040035 GO:GO:0040027
eggNOG:COG1236 KO:K14402 InterPro:IPR022712 InterPro:IPR025069
InterPro:IPR011108 PANTHER:PTHR11203:SF5 Pfam:PF10996 Pfam:PF13299
SMART:SM01027 GeneTree:ENSGT00700000104551 HOGENOM:HOG000264343
OMA:NNPFQFK EMBL:FO080529 PIR:T32487 RefSeq:NP_504822.1
ProteinModelPortal:O17403 SMR:O17403 STRING:O17403 PaxDb:O17403
EnsemblMetazoa:F09G2.4 GeneID:179103 KEGG:cel:CELE_F09G2.4
CTD:179103 WormBase:F09G2.4 InParanoid:O17403 NextBio:903938
Uniprot:O17403
Length = 843
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 30 GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDP--SAIDVLLITHFHLD 87
GA +E G C + G IL DCG + L YF+E+ P I +LI+H
Sbjct: 12 GAKDE-GPLCYLLQVDGDYILLDCGWDERFG----LQYFEELKPFIPKISAVLISHPDPL 66
Query: 88 HAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDML-FDEQDINRSMDR 146
H LPY + K + V+ T + ++ + D V S + VE+ + D++ + ++
Sbjct: 67 HLGGLPYLVSKCGLTAPVYATVPVYKMGQMFIYDMV-YSHLDVEEFEHYTLDDVDTAFEK 125
Query: 147 IE 148
+E
Sbjct: 126 VE 127
>UNIPROTKB|O17403 [details] [associations]
symbol:cpsf-2 "Probable cleavage and polyadenylation
specificity factor subunit 2" species:6239 "Caenorhabditis elegans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001279
InterPro:IPR027075 SMART:SM00849 Pfam:PF07521 GO:GO:0005634
GO:GO:0009792 GO:GO:0016246 GO:GO:0006397 GO:GO:0003723
GO:GO:0016787 GO:GO:0000910 GO:GO:0040035 GO:GO:0040027
eggNOG:COG1236 KO:K14402 InterPro:IPR022712 InterPro:IPR025069
InterPro:IPR011108 PANTHER:PTHR11203:SF5 Pfam:PF10996 Pfam:PF13299
SMART:SM01027 GeneTree:ENSGT00700000104551 HOGENOM:HOG000264343
OMA:NNPFQFK EMBL:FO080529 PIR:T32487 RefSeq:NP_504822.1
ProteinModelPortal:O17403 SMR:O17403 STRING:O17403 PaxDb:O17403
EnsemblMetazoa:F09G2.4 GeneID:179103 KEGG:cel:CELE_F09G2.4
CTD:179103 WormBase:F09G2.4 InParanoid:O17403 NextBio:903938
Uniprot:O17403
Length = 843
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 30 GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDP--SAIDVLLITHFHLD 87
GA +E G C + G IL DCG + L YF+E+ P I +LI+H
Sbjct: 12 GAKDE-GPLCYLLQVDGDYILLDCGWDERFG----LQYFEELKPFIPKISAVLISHPDPL 66
Query: 88 HAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVKVSKVSVEDML-FDEQDINRSMDR 146
H LPY + K + V+ T + ++ + D V S + VE+ + D++ + ++
Sbjct: 67 HLGGLPYLVSKCGLTAPVYATVPVYKMGQMFIYDMV-YSHLDVEEFEHYTLDDVDTAFEK 125
Query: 147 IE 148
+E
Sbjct: 126 VE 127
>DICTYBASE|DDB_G0282473 [details] [associations]
symbol:ints9 "integrator complex subunit 9"
species:44689 "Dictyostelium discoideum" [GO:0032039 "integrator
complex" evidence=IEA] [GO:0016180 "snRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR027074 dictyBase:DDB_G0282473
GO:GO:0005634 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG1236 InterPro:IPR022712 Pfam:PF10996 SMART:SM01027
KO:K13146 PANTHER:PTHR11203:SF2 RefSeq:XP_640069.1
ProteinModelPortal:Q54SH0 EnsemblProtists:DDB0234099 GeneID:8623598
KEGG:ddi:DDB_G0282473 OMA:DDFSTID ProtClustDB:CLSZ2729002
Uniprot:Q54SH0
Length = 712
Score = 104 (41.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 66 PYFDEIDP-SAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVK 124
P F+ ID S ID++LI+++ +A LP+ E T F G+++ T T I KLLL + V+
Sbjct: 106 PQFEMIDDFSTIDMILISNYTNIYA--LPFITEYTNFQGKIYATEPTVQIGKLLLEELVQ 163
Query: 125 VSK 127
+ K
Sbjct: 164 MDK 166
Score = 43 (20.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 39 CVYMSYKGKTILFDCGI 55
C + YK IL DC +
Sbjct: 14 CFLLEYKNVKILLDCAL 30
>UNIPROTKB|Q74C32 [details] [associations]
symbol:GSU1843 "RNA exonuclease, beta-lactamase fold
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001279 Pfam:PF00753
SMART:SM00849 Pfam:PF07521 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0004527 InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996
SMART:SM01027 HOGENOM:HOG000244774 KO:K07576 RefSeq:NP_952893.1
ProteinModelPortal:Q74C32 GeneID:2688625 KEGG:gsu:GSU1843
PATRIC:22026545 OMA:CHIDHVG ProtClustDB:CLSK2516562
BioCyc:GSUL243231:GH27-1786-MONOMER Uniprot:Q74C32
Length = 475
Score = 107 (42.7 bits), Expect = 0.00037, P = 0.00037
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 49 ILFDCGIHPAYSGMAA--LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVF 106
IL DCG+ G P+ D + L++TH H+DH +P+ L F G ++
Sbjct: 27 ILIDCGLLQGNDGAGGKRFPFID-FPLDRVKGLVLTHVHIDHCGRIPHLLG-AGFQGPIW 84
Query: 107 MTHATKAIYKLLLTDYVKVSKVSVEDML 134
+ A+ + L+L D VKV E ++
Sbjct: 85 CSEASALLLPLVLEDAVKVGITRDEHLI 112
>TIGR_CMR|GSU_1843 [details] [associations]
symbol:GSU_1843 "metallo-beta-lactamase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
Pfam:PF07521 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004527
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
HOGENOM:HOG000244774 KO:K07576 RefSeq:NP_952893.1
ProteinModelPortal:Q74C32 GeneID:2688625 KEGG:gsu:GSU1843
PATRIC:22026545 OMA:CHIDHVG ProtClustDB:CLSK2516562
BioCyc:GSUL243231:GH27-1786-MONOMER Uniprot:Q74C32
Length = 475
Score = 107 (42.7 bits), Expect = 0.00037, P = 0.00037
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 49 ILFDCGIHPAYSGMAA--LPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVF 106
IL DCG+ G P+ D + L++TH H+DH +P+ L F G ++
Sbjct: 27 ILIDCGLLQGNDGAGGKRFPFID-FPLDRVKGLVLTHVHIDHCGRIPHLLG-AGFQGPIW 84
Query: 107 MTHATKAIYKLLLTDYVKVSKVSVEDML 134
+ A+ + L+L D VKV E ++
Sbjct: 85 CSEASALLLPLVLEDAVKVGITRDEHLI 112
>TIGR_CMR|DET_0438 [details] [associations]
symbol:DET_0438 "metallo-beta-lactamase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001279 InterPro:IPR004613 Pfam:PF00753
PIRSF:PIRSF004803 SMART:SM00849 Pfam:PF07521 GO:GO:0046872
GO:GO:0003723 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0016788
InterPro:IPR011108 eggNOG:COG0595 HOGENOM:HOG000280201 KO:K12574
PANTHER:PTHR11203:SF22 TIGRFAMs:TIGR00649 OMA:FLVDSTN
RefSeq:YP_181182.1 ProteinModelPortal:Q3Z9B7 STRING:Q3Z9B7
GeneID:3230229 KEGG:det:DET0438 PATRIC:21607945
ProtClustDB:CLSK837476 BioCyc:DETH243164:GJNF-438-MONOMER
Uniprot:Q3Z9B7
Length = 551
Score = 107 (42.7 bits), Expect = 0.00045, P = 0.00045
Identities = 28/105 (26%), Positives = 51/105 (48%)
Query: 23 QLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGI-HPAYSGMA---ALPYFDEI--DPSAI 76
+L I+PLG E+G++ + + Y IL DCG+ P + +P + + +
Sbjct: 5 KLKIVPLGGLGEIGKNMMSVEYGEDIILIDCGLMFPEEEMLGIDLVIPDISYVLENREKV 64
Query: 77 DVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTD 121
++ITH H DH +LPY L + ++ T T+ + + L +
Sbjct: 65 RGIVITHGHEDHIGALPYILPQINVP--IYCTKLTQGLISVKLKE 107
>UNIPROTKB|F1RJQ5 [details] [associations]
symbol:INTS9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032039 "integrator complex" evidence=IEA] [GO:0016180
"snRNA processing" evidence=IEA] InterPro:IPR027074
InterPro:IPR022712 Pfam:PF10996 SMART:SM01027 PANTHER:PTHR11203:SF2
GeneTree:ENSGT00390000001445 OMA:PLAMKCV EMBL:CU407017
Ensembl:ENSSSCT00000010615 Uniprot:F1RJQ5
Length = 576
Score = 107 (42.7 bits), Expect = 0.00048, P = 0.00048
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 66 PYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTDYVK- 124
P + ID S +DV+LI+++H A LPY E T F+G V+ T T I +LL+ + V
Sbjct: 4 PQTELIDLSTVDVILISNYHCMMA--LPYITEHTGFTGTVYATEPTVQIGRLLMEELVNF 61
Query: 125 VSKV--SVEDMLFDEQDINR 142
+ +V + L+ +DI R
Sbjct: 62 IERVPKAQSASLWKNKDIQR 81
>TAIR|locus:2172843 [details] [associations]
symbol:CPSF100 "cleavage and polyadenylation specificity
factor 100" species:3702 "Arabidopsis thaliana" [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=NAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=ISS;NAS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0006379 "mRNA
cleavage" evidence=ISS] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006306 "DNA methylation" evidence=RCA] [GO:0006342 "chromatin
silencing" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006397 "mRNA processing" evidence=RCA] [GO:0007267 "cell-cell
signaling" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016569 "covalent chromatin modification"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] InterPro:IPR001279 InterPro:IPR027075
Pfam:PF00753 SMART:SM00849 GO:GO:0009506 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006378 EMBL:AB005244 GO:GO:0003723
GO:GO:0016787 GO:GO:0005847 GO:GO:0006379 eggNOG:COG1236 KO:K14402
InterPro:IPR022712 InterPro:IPR025069 PANTHER:PTHR11203:SF5
Pfam:PF10996 Pfam:PF13299 SMART:SM01027 EMBL:AF283277 EMBL:AY034982
EMBL:BT004374 IPI:IPI00521104 RefSeq:NP_197776.1 UniGene:At.25191
ProteinModelPortal:Q9LKF9 SMR:Q9LKF9 IntAct:Q9LKF9 STRING:Q9LKF9
PaxDb:Q9LKF9 PRIDE:Q9LKF9 EnsemblPlants:AT5G23880.1 GeneID:832453
KEGG:ath:AT5G23880 TAIR:At5g23880 HOGENOM:HOG000264343
InParanoid:Q9LKF9 OMA:NNPFQFK PhylomeDB:Q9LKF9
ProtClustDB:CLSN2686300 Genevestigator:Q9LKF9 GermOnline:AT5G23880
GO:GO:0035194 Uniprot:Q9LKF9
Length = 739
Score = 107 (42.7 bits), Expect = 0.00066, P = 0.00066
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 21 GDQLTIIPL-GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVL 79
G + + PL G NE S + +S G L DCG + + P + S ID +
Sbjct: 2 GTSVQVTPLCGVYNENPLSYL-VSIDGFNFLIDCGWNDLFDTSLLEP-LSRV-ASTIDAV 58
Query: 80 LITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKL-LLTDYVK-VSKVSVEDM-LFD 136
L++H H +LPY +++ S V+ AT+ +++L LLT Y + +S+ V D LF
Sbjct: 59 LLSHPDTLHIGALPYAMKQLGLSAPVY---ATEPVHRLGLLTMYDQFLSRKQVSDFDLFT 115
Query: 137 EQDINRSMDRI 147
DI+ + +
Sbjct: 116 LDDIDSAFQNV 126
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 157 157 0.00079 106 3 11 22 0.44 31
30 0.42 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 78
No. of states in DFA: 557 (59 KB)
Total size of DFA: 136 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.17u 0.15s 15.32t Elapsed: 00:00:01
Total cpu time: 15.18u 0.15s 15.33t Elapsed: 00:00:01
Start: Thu May 9 14:13:21 2013 End: Thu May 9 14:13:22 2013