Query 031590
Match_columns 157
No_of_seqs 138 out of 1284
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 03:33:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031590.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031590hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3osx_A 60 kDa chaperonin; alph 100.0 1.6E-70 5.6E-75 444.4 12.8 152 1-155 15-173 (201)
2 3m6c_A 60 kDa chaperonin 1; ch 100.0 2.3E-70 8E-75 441.9 11.9 152 1-155 8-166 (194)
3 1srv_A Protein (groel (HSP60 c 100.0 2.2E-68 7.5E-73 414.0 11.3 137 1-140 2-145 (145)
4 3rtk_A 60 kDa chaperonin 2; he 100.0 4.2E-40 1.4E-44 298.3 12.8 152 1-155 191-349 (546)
5 1kp8_A Groel protein; chaperon 100.0 8E-40 2.7E-44 296.3 14.2 151 1-154 192-349 (547)
6 1we3_A CPN60(groel); chaperoni 100.0 5.2E-39 1.8E-43 290.5 11.8 152 1-155 191-349 (543)
7 1iok_A Chaperonin 60; chaperon 100.0 3.8E-39 1.3E-43 291.7 10.9 151 1-154 193-350 (545)
8 3iyg_E T-complex protein 1 sub 99.9 1.8E-22 6.3E-27 180.8 9.3 127 1-142 206-357 (515)
9 3p9d_E T-complex protein 1 sub 99.8 1.3E-21 4.5E-26 177.3 7.9 127 1-142 243-400 (562)
10 3p9d_A T-complex protein 1 sub 99.8 1.9E-21 6.5E-26 176.1 6.4 121 1-141 222-378 (559)
11 3aq1_B Thermosome subunit; gro 99.8 5.3E-21 1.8E-25 171.0 7.0 119 1-141 170-318 (500)
12 3iyg_H T-complex protein 1 sub 99.8 1.3E-20 4.5E-25 169.1 8.9 123 1-142 205-357 (515)
13 1a6d_A Thermosome (alpha subun 99.8 5.3E-21 1.8E-25 172.7 5.7 119 1-141 216-364 (545)
14 1q3q_A Thermosome alpha subuni 99.8 9.1E-21 3.1E-25 171.2 6.4 120 1-142 219-368 (548)
15 1a6d_B Thermosome (beta subuni 99.8 1.9E-20 6.3E-25 168.9 5.9 119 1-141 217-365 (543)
16 3p9d_C T-complex protein 1 sub 99.8 2E-20 6.9E-25 170.8 5.7 132 1-154 223-411 (590)
17 3ruv_A Chaperonin, CPN; double 99.8 4.2E-20 1.4E-24 166.7 7.1 122 1-143 212-362 (543)
18 3ko1_A Chaperonin; 9-fold symm 99.8 9.8E-20 3.4E-24 164.9 8.0 122 1-143 226-376 (553)
19 3iyg_Z T-complex protein 1 sub 99.8 1E-18 3.6E-23 156.8 8.9 121 1-143 202-361 (517)
20 3p9d_D T-complex protein 1 sub 99.8 1.3E-18 4.6E-23 156.5 9.4 109 1-130 213-353 (528)
21 3iyg_B T-complex protein 1 sub 99.8 1.3E-18 4.5E-23 155.9 9.1 116 1-139 205-351 (513)
22 3iyg_D T-complex protein 1 sub 99.7 2.9E-18 9.9E-23 153.9 9.6 115 1-132 206-346 (518)
23 3iyg_A T-complex protein 1 sub 99.7 8E-18 2.7E-22 151.3 8.2 121 1-142 208-363 (529)
24 3p9d_F T-complex protein 1 sub 99.7 1.6E-18 5.5E-23 156.4 3.3 121 1-142 213-372 (546)
25 3p9d_G T-complex protein 1 sub 99.7 2.3E-17 7.8E-22 149.2 8.6 121 1-140 218-368 (550)
26 3iyg_Q T-complex protein 1 sub 99.7 1.7E-16 5.8E-21 142.1 10.7 113 1-131 205-338 (512)
27 3p9d_B T-complex protein 1 sub 99.7 2.9E-17 1E-21 147.5 4.1 116 1-139 212-358 (527)
28 3iyg_G T-complex protein 1 sub 99.6 1.9E-16 6.4E-21 142.0 7.9 120 1-141 206-355 (515)
29 3p9d_H T-complex protein 1 sub 99.5 5.8E-15 2E-19 133.9 3.4 115 1-139 226-373 (568)
30 1ass_A Thermosome; chaperonin, 97.8 7.1E-05 2.4E-09 57.6 8.6 110 18-142 15-153 (159)
31 1gml_A T-complex protein 1 sub 97.3 0.00077 2.6E-08 52.5 7.7 108 17-139 20-157 (178)
32 2dun_A POL MU, DNA polymerase 44.3 5 0.00017 30.2 0.1 26 87-112 22-47 (133)
33 3v7e_A Ribosome-associated pro 39.4 14 0.00047 24.7 1.8 34 46-79 23-57 (82)
34 2coe_A Deoxynucleotidyltransfe 38.8 22 0.00074 25.9 2.9 25 87-111 32-56 (120)
35 3n2l_A OPRT, oprtase, orotate 33.7 20 0.00068 28.8 2.2 69 2-83 49-126 (238)
36 2pt7_G HP1451, hypothetical pr 31.1 24 0.00081 26.7 2.1 32 66-101 63-94 (152)
37 4a5z_A MITD1, MIT domain-conta 27.0 1E+02 0.0035 23.7 5.0 99 8-141 27-130 (163)
38 1lh0_A OMP synthase; loop clos 25.4 21 0.00072 27.5 0.9 67 2-81 24-99 (213)
39 3m3h_A OPRT, oprtase, orotate 23.5 19 0.00064 28.8 0.3 65 3-82 49-119 (234)
40 3dez_A OPRT, oprtase, orotate 21.7 25 0.00085 28.2 0.7 65 3-82 61-131 (243)
41 3v7q_A Probable ribosomal prot 20.5 62 0.0021 22.1 2.5 18 50-67 36-53 (101)
42 2aee_A OPRT, oprtase, orotate 20.3 36 0.0012 25.9 1.3 31 50-82 68-99 (211)
No 1
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=1.6e-70 Score=444.44 Aligned_cols=152 Identities=24% Similarity=0.367 Sum_probs=149.4
Q ss_pred CccCCccccccc-CCCCCceEEeeCceEEeecccccchHHHHHHH--HhhcCCceEEEecccccchhhhhhcccccCcce
Q 031590 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (157)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~~le~p~IL~td~kIs~~~~ilp~L--~~~~~rpLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (157)
|||||||+|||| ||+++|+++|+|||||+||+|||+++|++|+| +++.+||||||||||++|||+|||+||+||+++
T Consensus 15 ~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg~l~ 94 (201)
T 3osx_A 15 MQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRGIVK 94 (201)
T ss_dssp EEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHTSCC
T ss_pred cEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccceEE
Confidence 799999999999 99999999999999999999999999999999 889999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCcEEeec---cccCCCCCCCCceeeEEEEeCCceEEEcCCCChHHHHHHHHHh
Q 031590 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKELLYQMTRWLSLVGLVASLLLKKDVHRF 153 (157)
Q Consensus 78 v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~---~~l~~v~~~~LG~a~~v~vtkd~T~i~~g~g~~~~I~~Rv~qi 153 (157)
|| |||| ||||+||++|+||||+|||+||++ ++|+++++++||+|++|+||||+|+|++|.|++++|++||+||
T Consensus 95 v~AVKAP---gFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 95 VASVKAP---GFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp EEEEECS---SCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred EEEEeCC---CCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99 9999 999999999999999999999999 8999999999999999999999999999999999999999998
Q ss_pred hh
Q 031590 154 FM 155 (157)
Q Consensus 154 ~~ 155 (157)
-.
T Consensus 172 r~ 173 (201)
T 3osx_A 172 RQ 173 (201)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 2
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.3e-70 Score=441.91 Aligned_cols=152 Identities=25% Similarity=0.355 Sum_probs=149.5
Q ss_pred CccCCccccccc-CCCCCceEEeeCceEEeecccccchHHHHHHH--HhhcCCceEEEecccccchhhhhhcccccCcce
Q 031590 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (157)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~~le~p~IL~td~kIs~~~~ilp~L--~~~~~rpLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (157)
|||||||+|||| ||+++|+++|+|||||+||+|||+++|++|+| +.+.+||||||||||++|||+|||+||+||+++
T Consensus 8 mqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNklrg~l~ 87 (194)
T 3m6c_A 8 IGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNAIRKTLK 87 (194)
T ss_dssp EEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHHHHTSSC
T ss_pred eEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhhccceEE
Confidence 899999999999 99999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCcEEeec---cccCCCCCCCCceeeEEEEeCCceEEEcCCCChHHHHHHHHHh
Q 031590 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKELLYQMTRWLSLVGLVASLLLKKDVHRF 153 (157)
Q Consensus 78 v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~---~~l~~v~~~~LG~a~~v~vtkd~T~i~~g~g~~~~I~~Rv~qi 153 (157)
|| |||| ||||+||++|+|||++|||+||++ ++|+++++++||+|++|+||||+|+|++|.|++++|++||+||
T Consensus 88 v~AVKAP---gfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv~qI 164 (194)
T 3m6c_A 88 AVAVKGP---YFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRAKHL 164 (194)
T ss_dssp EEEEECS---SCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred EEEEECC---CCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99 9999 999999999999999999999999 8999999999999999999999999999999999999999998
Q ss_pred hh
Q 031590 154 FM 155 (157)
Q Consensus 154 ~~ 155 (157)
-.
T Consensus 165 r~ 166 (194)
T 3m6c_A 165 RA 166 (194)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 3
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=2.2e-68 Score=413.97 Aligned_cols=137 Identities=26% Similarity=0.417 Sum_probs=135.0
Q ss_pred CccCCccccccc-CCCCCceEEeeCceEEeecccccchHHHHHHH--HhhcCCceEEEecccccchhhhhhcccccCcce
Q 031590 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (157)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~~le~p~IL~td~kIs~~~~ilp~L--~~~~~rpLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (157)
|||||||+|||| ||+++|+++|||||||+||+|||+++|++|+| +++++||||||||||++|||+|||+||+||+++
T Consensus 2 mqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l~ 81 (145)
T 1srv_A 2 YQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLS 81 (145)
T ss_dssp EEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSCC
T ss_pred ccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccce
Confidence 899999999999 99999999999999999999999999999999 889999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCcEEeec---cccCCCCCCCCceeeEEEEeCCceEEEcCC
Q 031590 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKELLYQMTRWLSLVGL 140 (157)
Q Consensus 78 v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~---~~l~~v~~~~LG~a~~v~vtkd~T~i~~g~ 140 (157)
|| |||| ||||+||++|+|||++|||+||++ ++|+++++++||+|++|+||||+|+|++|.
T Consensus 82 v~AVKAP---gfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G~ 145 (145)
T 1srv_A 82 VAAVKAP---GFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGK 145 (145)
T ss_dssp EEEEECC---SSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEEC
T ss_pred EEEEeCC---CcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCCC
Confidence 99 9999 999999999999999999999999 999999999999999999999999999874
No 4
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=4.2e-40 Score=298.34 Aligned_cols=152 Identities=26% Similarity=0.414 Sum_probs=148.0
Q ss_pred CccCCccccccc-CCCCCceEEeeCceEEeecccccchHHHHHHH--HhhcCCceEEEecccccchhhhhhcccccCcce
Q 031590 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (157)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~~le~p~IL~td~kIs~~~~ilp~L--~~~~~rpLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (157)
|+|||||+|||| ||+++|..+++||+||++|.||+++++++|+| +.+.|+||||++++|+++||++|+.|++||+++
T Consensus 191 m~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~ 270 (546)
T 3rtk_A 191 MRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFK 270 (546)
T ss_dssp EEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCC
T ss_pred EEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceE
Confidence 689999999999 99999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCcEEeec---cccCCCCCCCCceeeEEEEeCCceEEEcCCCChHHHHHHHHHh
Q 031590 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKELLYQMTRWLSLVGLVASLLLKKDVHRF 153 (157)
Q Consensus 78 v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~---~~l~~v~~~~LG~a~~v~vtkd~T~i~~g~g~~~~I~~Rv~qi 153 (157)
|+ ||+| +||++|++.|+|||++|||+++++ ++++++++++||+|+++++++|+|+++.|.+++++++.||+||
T Consensus 271 v~aVk~~---~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i 347 (546)
T 3rtk_A 271 SVAVKAP---GFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQI 347 (546)
T ss_dssp EEEEECS---SCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHH
T ss_pred EEEeccc---cccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHH
Confidence 99 9999 999999999999999999999997 6899999999999999999999999999999999999999998
Q ss_pred hh
Q 031590 154 FM 155 (157)
Q Consensus 154 ~~ 155 (157)
-.
T Consensus 348 ~~ 349 (546)
T 3rtk_A 348 RQ 349 (546)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 5
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=8e-40 Score=296.34 Aligned_cols=151 Identities=25% Similarity=0.382 Sum_probs=147.7
Q ss_pred CccCCccccccc-CCCCCceEEeeCceEEeecccccchHHHHHHH--HhhcCCceEEEecccccchhhhhhcccccCcce
Q 031590 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (157)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~~le~p~IL~td~kIs~~~~ilp~L--~~~~~rpLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (157)
|+|||||+|||| ||+++|.++++||+||++|.||+++++++|+| +.+.++||||++++|+++||++|+.|++||+++
T Consensus 192 ~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~ 271 (547)
T 1kp8_A 192 MQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVK 271 (547)
T ss_dssp EEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSC
T ss_pred EEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhccccccee
Confidence 689999999999 99999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCcEEeec---cccCCCCCCCCceeeEEEEeCCceEEEcCCCChHHHHHHHHHh
Q 031590 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKELLYQMTRWLSLVGLVASLLLKKDVHRF 153 (157)
Q Consensus 78 v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~---~~l~~v~~~~LG~a~~v~vtkd~T~i~~g~g~~~~I~~Rv~qi 153 (157)
|| ||+| +||++|++.|+|||++|||+++++ ++++++++++||+|+++++++|+|+++.|.++++++++|++||
T Consensus 272 v~aVk~~---~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i 348 (547)
T 1kp8_A 272 VAAVKAP---GFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQI 348 (547)
T ss_dssp EEEEECS---SCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred EEEEecc---ccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHH
Confidence 99 9999 999999999999999999999998 7899999999999999999999999999999999999999998
Q ss_pred h
Q 031590 154 F 154 (157)
Q Consensus 154 ~ 154 (157)
-
T Consensus 349 ~ 349 (547)
T 1kp8_A 349 R 349 (547)
T ss_dssp H
T ss_pred H
Confidence 4
No 6
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=5.2e-39 Score=290.53 Aligned_cols=152 Identities=24% Similarity=0.360 Sum_probs=147.8
Q ss_pred CccCCccccccc-CCCCCceEEeeCceEEeecccccchHHHHHHH--HhhcCCceEEEecccccchhhhhhcccccCcce
Q 031590 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (157)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~~le~p~IL~td~kIs~~~~ilp~L--~~~~~rpLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (157)
|+|||||+|||| ||+++|.++++||+||++|.||+++++++|+| +.+.++||||++++|+++||++|+.|++||+++
T Consensus 191 ~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~ 270 (543)
T 1we3_A 191 YQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLS 270 (543)
T ss_dssp EEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCC
T ss_pred EEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhcccccee
Confidence 689999999999 99999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCcEEeec---cccCCCCCCCCceeeEEEEeCCceEEEcCCCChHHHHHHHHHh
Q 031590 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKELLYQMTRWLSLVGLVASLLLKKDVHRF 153 (157)
Q Consensus 78 v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~---~~l~~v~~~~LG~a~~v~vtkd~T~i~~g~g~~~~I~~Rv~qi 153 (157)
|+ ||+| +||++|++.|+|||++|||+++++ ++++++++++||+|+++++++|+|+++.|.+++++++.|++||
T Consensus 271 v~aVk~~---~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i 347 (543)
T 1we3_A 271 VAAVKAP---GFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGI 347 (543)
T ss_dssp EEEEECS---SSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred EEEEecc---chhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHH
Confidence 99 9999 999999999999999999999998 7899999999999999999999999999999999999999998
Q ss_pred hh
Q 031590 154 FM 155 (157)
Q Consensus 154 ~~ 155 (157)
-.
T Consensus 348 ~~ 349 (543)
T 1we3_A 348 KK 349 (543)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 7
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=3.8e-39 Score=291.65 Aligned_cols=151 Identities=28% Similarity=0.389 Sum_probs=111.1
Q ss_pred CccCCccccccc-CCCCCceEEeeCceEEeecccccchHHHHHHH--HhhcCCceEEEecccccchhhhhhcccccCcce
Q 031590 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (157)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~~le~p~IL~td~kIs~~~~ilp~L--~~~~~rpLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (157)
|+|||||+|||| ||+++|.++++||+||++|.||+++++++|+| +.+.++||||++++|+++||.+|+.|++||+++
T Consensus 193 ~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~ 272 (545)
T 1iok_A 193 MQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLK 272 (545)
T ss_dssp EECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------
T ss_pred EEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccce
Confidence 689999999999 99999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCcEEeec---cccCCCCCCCCceeeEEEEeCCceEEEcCCCChHHHHHHHHHh
Q 031590 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKELLYQMTRWLSLVGLVASLLLKKDVHRF 153 (157)
Q Consensus 78 v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~---~~l~~v~~~~LG~a~~v~vtkd~T~i~~g~g~~~~I~~Rv~qi 153 (157)
|+ ||+| +||++|++.|+|||++|||+++++ ++++++++++||+|+++++++|+|+++.|.++++++++|++||
T Consensus 273 v~aVk~~---~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i 349 (545)
T 1iok_A 273 IAAVKAP---GFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQI 349 (545)
T ss_dssp CEEEECS---CCTTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHH
T ss_pred eEEEecc---hhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHH
Confidence 99 9999 999999999999999999999997 7899999999999999999999999999999999999999998
Q ss_pred h
Q 031590 154 F 154 (157)
Q Consensus 154 ~ 154 (157)
-
T Consensus 350 ~ 350 (545)
T 1iok_A 350 R 350 (545)
T ss_dssp H
T ss_pred H
Confidence 5
No 8
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.87 E-value=1.8e-22 Score=180.84 Aligned_cols=127 Identities=14% Similarity=0.078 Sum_probs=113.1
Q ss_pred CccCCccccccc-CCCCC-ceEEeeCceEEe-----ecccccchHHH-----------HHHH--HhhcCCceEEEecccc
Q 031590 1 MKLKWRPVSSYF-TNQKA-KDCVLENPFLLI-----LENMIVSKNIV-----------EQAI--AQADSRPLLIVAEDVE 60 (157)
Q Consensus 1 m~fdrGylSpyf-td~~~-~~~~le~p~IL~-----td~kIs~~~~i-----------lp~L--~~~~~rpLlIIAedv~ 60 (157)
|+|||||+|||| ++.++ +.+.|+.||.+. ++.+|++++++ .|.+ +.+.|+||+|++++|+
T Consensus 206 ~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~ 285 (515)
T 3iyg_E 206 VIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFD 285 (515)
T ss_pred EEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCC
Confidence 689999999999 99875 889999999998 78899999997 6777 8889999999999999
Q ss_pred cchhhhhhcccccCcceEEeecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEE-----eCCceE
Q 031590 61 DKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLY-----QMTRWL 135 (157)
Q Consensus 61 ~eaL~tLv~Nk~rg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~v-----tkd~T~ 135 (157)
++||.+|+.|++++ |+.+ + +..|+|||.+|||++++. ++++++++||+|+++.+ ++|+++
T Consensus 286 ~~al~~L~~~~I~~-----v~~v---~-----k~~le~ia~~tGa~ii~~--l~~l~~~~LG~a~~v~~~~ig~~k~~~~ 350 (515)
T 3iyg_E 286 DEANHLLLQNDLPA-----VRWV---G-----GPEIELIAIATGGRIVPR--FSELTAEKLGFAGLVKEISFGTTKDKML 350 (515)
T ss_pred HHHHHHHHHCCCEE-----Eecc---C-----HHHHHHHHHHhCCEEecc--cccCCHHHCCcceEEEEEEeccccceEE
Confidence 99999999999875 5666 3 668999999999999985 77889999999999999 788888
Q ss_pred EEcCCCC
Q 031590 136 SLVGLVA 142 (157)
Q Consensus 136 i~~g~g~ 142 (157)
++.|.++
T Consensus 351 ~~~g~~~ 357 (515)
T 3iyg_E 351 VIEQCKN 357 (515)
T ss_pred EEEcCCC
Confidence 8877554
No 9
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=99.84 E-value=1.3e-21 Score=177.27 Aligned_cols=127 Identities=16% Similarity=0.115 Sum_probs=112.0
Q ss_pred CccCCccccccc-CCC-------CCceEEeeCceEEeec-----ccccchHH-----------HHHHH--HhhcCCceEE
Q 031590 1 MKLKWRPVSSYF-TNQ-------KAKDCVLENPFLLILE-----NMIVSKNI-----------VEQAI--AQADSRPLLI 54 (157)
Q Consensus 1 m~fdrGylSpyf-td~-------~~~~~~le~p~IL~td-----~kIs~~~~-----------ilp~L--~~~~~rpLlI 54 (157)
|+|||||+|||| ++. +.+.+.|+.||.+..+ .+|+++++ +.|.+ +.+.|+||+|
T Consensus 243 mv~dk~~~sp~m~~~~~~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI 322 (562)
T 3p9d_E 243 VILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVI 322 (562)
T ss_dssp EEESSCCCTTSCCC-----TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCE
T ss_pred EEEecCCCCCCcCcccccccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 689999999999 986 8888999999999866 68999998 67988 8899999999
Q ss_pred EecccccchhhhhhcccccCcceEEeecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEE-----
Q 031590 55 VAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLY----- 129 (157)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~v----- 129 (157)
++++|+++||.+|+.|++++ |+.| + ++.|+|||.+|||++++. ++++++++||+|+++.+
T Consensus 323 ~~~~I~~~Al~~L~~~~I~~-----v~~v---~-----k~~le~ia~~TGa~iis~--l~~l~~~~LG~a~~v~~~~ig~ 387 (562)
T 3p9d_E 323 CQWGFDDEANHLLLQNDLPA-----VRWV---G-----GQELEHIAISTNGRIVPR--FQDLSKDKLGTCSRIYEQEFGT 387 (562)
T ss_dssp ECSSCCSHHHHHHHTTTCCC-----EECC---C-----TTTHHHHHHHHCCCEEES--SSCCCTTSCEECSCEEEECCSS
T ss_pred EeCCCCHHHHHHHHHCCCEE-----Eecc---C-----HHHHHHHHHHhCCEEEec--cccCCHHHCCcceEEEEEEecc
Confidence 99999999999999999986 6777 3 567999999999999986 78899999999999999
Q ss_pred eCCceEEEcCCCC
Q 031590 130 QMTRWLSLVGLVA 142 (157)
Q Consensus 130 tkd~T~i~~g~g~ 142 (157)
++|+++++.|.++
T Consensus 388 ~~~~~~~i~g~~~ 400 (562)
T 3p9d_E 388 TKDRMLIIEQSKE 400 (562)
T ss_dssp SSCCEEEECCCSC
T ss_pred CCceEEEEecCCC
Confidence 6888888887554
No 10
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=99.83 E-value=1.9e-21 Score=176.14 Aligned_cols=121 Identities=14% Similarity=0.222 Sum_probs=103.9
Q ss_pred CccCCccccccc-CCCCCceEEee--CceEEeecccc-------------cchHH-----------HHHHH--HhhcCCc
Q 031590 1 MKLKWRPVSSYF-TNQKAKDCVLE--NPFLLILENMI-------------VSKNI-----------VEQAI--AQADSRP 51 (157)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~~le--~p~IL~td~kI-------------s~~~~-----------ilp~L--~~~~~rp 51 (157)
|.||+||+|||| + +++ ||+||++|.++ ++.++ ++|++ +.+.|+|
T Consensus 222 ~v~dk~~~~~~m~~-------~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~ 294 (559)
T 3p9d_A 222 YALNCTVASQAMPK-------RIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQ 294 (559)
T ss_dssp ECCCCCCSSTTSCS-------EECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred EEEeecccCCCcce-------eeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 689999999998 4 566 99999999997 56666 78888 8899999
Q ss_pred eEEEecccccchhhhhhcccccCcceEEeecCCCCCchhhHhhhhhhhhhhhCcEEeec---ccc-CCCCCCCCceeeEE
Q 031590 52 LLIVAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATN-VSFMPLMLGSCKEL 127 (157)
Q Consensus 52 LlIIAedv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~---~~l-~~v~~~~LG~a~~v 127 (157)
|+|++++|+++||.+|+.|++ + .+++.|+..|+|||.+|||+++++ +++ +++++++||+|+++
T Consensus 295 lvI~~~~I~~~al~~L~~~~I------~-------av~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v 361 (559)
T 3p9d_A 295 VVLTTKGIDDLCLKEFVEAKI------M-------GVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEV 361 (559)
T ss_dssp EEEESSCCCGGGTHHHHHTTC------E-------EESSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEE
T ss_pred EEEEcCCCCHHHHHHHHHcCC------c-------eEccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEE
Confidence 999999999999999999985 2 234556888999999999999999 343 78999999999999
Q ss_pred E---EeCCceEEEcCCC
Q 031590 128 L---YQMTRWLSLVGLV 141 (157)
Q Consensus 128 ~---vtkd~T~i~~g~g 141 (157)
. +++++++++.|.+
T Consensus 362 ~~~~ig~~~~~~~~g~~ 378 (559)
T 3p9d_A 362 VQAKFSDDECILIKGTS 378 (559)
T ss_dssp EEEECSSCEEECEEEES
T ss_pred EEEEEcCceEEEEEcCC
Confidence 9 6888888887643
No 11
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=99.82 E-value=5.3e-21 Score=170.98 Aligned_cols=119 Identities=12% Similarity=0.118 Sum_probs=99.0
Q ss_pred CccCCcccccccCCCCCceEEeeCceEEeeccc-------------ccchHHH-----------HHHH--HhhcCCceEE
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENM-------------IVSKNIV-----------EQAI--AQADSRPLLI 54 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le~p~IL~td~k-------------Is~~~~i-----------lp~L--~~~~~rpLlI 54 (157)
|.|||||+|||| ..+++||+||++|.+ |++++++ .|.+ +.+.++||+|
T Consensus 170 ~v~dk~~~~~~m------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi 243 (500)
T 3aq1_B 170 LVIDKERSHPNM------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVF 243 (500)
T ss_dssp EEESCCCSSTTS------CSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCSEEE
T ss_pred eEEeecCCCCCC------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEE
Confidence 679999999999 226899999999999 9999997 9999 8899999999
Q ss_pred EecccccchhhhhhcccccCcceEE-eecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEEe---
Q 031590 55 VAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQ--- 130 (157)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~vt--- 130 (157)
++++|+++||.+|+.|+ ++ |+ +.|++.|+|||.+|||++++. ++++++++||+|+++.++
T Consensus 244 ~~~~I~~~al~~L~~~~------I~av~--------~~~k~~le~ia~~tGa~iis~--l~~~~~~~LG~a~~v~~~~ig 307 (500)
T 3aq1_B 244 CQKGIDDMAQYYIEKAG------IYAVR--------RVKKSDLKRLSKVTGATIIQD--LDQITTEDVGTAGLVEEKEVR 307 (500)
T ss_dssp ESSCBCHHHHHHHHHTT------CEEEC--------SCCHHHHHHHHHHHCCCCBSC--TTCCCSTTCEEEEEEEEEECS
T ss_pred ECCCcCHHHHHHHHHCC------EEEEE--------eCCHHHHHHHHHHhCCeEecc--cccCCHhHCCCceEEEEEEec
Confidence 99999999999999986 34 53 567889999999999999985 788999999999999998
Q ss_pred CCceEEEcCCC
Q 031590 131 MTRWLSLVGLV 141 (157)
Q Consensus 131 kd~T~i~~g~g 141 (157)
+++++++.|.+
T Consensus 308 ~~~~~~~~g~~ 318 (500)
T 3aq1_B 308 GGKMTYVTGCQ 318 (500)
T ss_dssp SSEEEEEEEET
T ss_pred CeEEEEEECCC
Confidence 78888887644
No 12
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.82 E-value=1.3e-20 Score=169.07 Aligned_cols=123 Identities=11% Similarity=0.132 Sum_probs=103.4
Q ss_pred CccCCccccccc-CCCCCceEEeeCceEEeecc-------------cccchHHH-----------HHHH--HhhcCCceE
Q 031590 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILEN-------------MIVSKNIV-----------EQAI--AQADSRPLL 53 (157)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~~le~p~IL~td~-------------kIs~~~~i-----------lp~L--~~~~~rpLl 53 (157)
|+|||||.|||| |+++ +++||+||++|. +|++++++ .|.+ +.+.|.||+
T Consensus 205 ~~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vv 280 (515)
T 3iyg_H 205 VAFKKTFSYAGFEMQPK----KYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVV 280 (515)
T ss_pred eEEecCccCcccccCCc----cccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence 689999999999 9887 799999999999 69999998 5556 788999999
Q ss_pred EEecccccchhhhhhcccccCcceEEeecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEEe---
Q 031590 54 IVAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQ--- 130 (157)
Q Consensus 54 IIAedv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~vt--- 130 (157)
|.+++|++ +++..+| .+|.+ .+++.|+..|+|||.+|||+++++ ++++++++||+|+++.++
T Consensus 281 i~~~~I~d--la~~~l~-~~gI~----------~v~~~~k~~leria~~tGa~ii~~--l~~~~~~~LG~a~~v~~~~ig 345 (515)
T 3iyg_H 281 LSKLPIGD--VATQYFA-DRDMF----------CAGRVPEEDLKRTMMACGGSIQTS--VNALSSDVLGRCQVFEETQIG 345 (515)
T ss_pred EECCcccH--HHHHHHH-HcCCc----------ccccccHHHHHHHHHHhCCEEeec--cccCCHHHCCcccEEEEEEEc
Confidence 99999985 7777787 57764 234566889999999999999986 678889999999999988
Q ss_pred CCceEEEcCCCC
Q 031590 131 MTRWLSLVGLVA 142 (157)
Q Consensus 131 kd~T~i~~g~g~ 142 (157)
+++++++.|.++
T Consensus 346 ~~~~~~i~g~~~ 357 (515)
T 3iyg_H 346 GERYNFFTGCPK 357 (515)
T ss_pred CeEEEEEecCCC
Confidence 477777766443
No 13
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=99.82 E-value=5.3e-21 Score=172.67 Aligned_cols=119 Identities=16% Similarity=0.249 Sum_probs=103.6
Q ss_pred CccCCcccccccCCCCCceEEeeCceEEeeccc-------------ccchHHH-----------HHHH--HhhcCCceEE
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENM-------------IVSKNIV-----------EQAI--AQADSRPLLI 54 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le~p~IL~td~k-------------Is~~~~i-----------lp~L--~~~~~rpLlI 54 (157)
|.|||||.||||. ..++||+||++|.+ |++++++ .|.+ +.+.++||||
T Consensus 216 ~v~dk~~~~~~m~------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi 289 (545)
T 1a6d_A 216 IVIDKEKVHSKMP------DVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVL 289 (545)
T ss_dssp EEESCCCSCTTSC------SEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEeccCCCCCCc------ceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 6799999999991 24899999999999 9999997 8988 8899999999
Q ss_pred EecccccchhhhhhcccccCcceEE-eecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEEe---
Q 031590 55 VAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQ--- 130 (157)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~vt--- 130 (157)
++++|+++||.+|+.|+ ++ |+ +.|++.|+|||.+|||++++. ++++++++||+|+++.++
T Consensus 290 ~~~~I~~~al~~L~~~~------I~av~--------~~~k~~le~ia~~tGa~iis~--l~~~~~~~LG~a~~v~~~~ig 353 (545)
T 1a6d_A 290 CQKGIDDVAQHYLAKEG------IYAVR--------RVKKSDMEKLAKATGAKIVTD--LDDLTPSVLGEAETVEERKIG 353 (545)
T ss_dssp ESSCBCHHHHHHHHHHT------CEEEC--------SCCHHHHHHHHHHHCCCEESS--GGGCCGGGCEEEEEEEEEEET
T ss_pred ECCCccHHHHHHHHHCC------eeEec--------cCCHHHHHHHHHHhCCeeecc--cccCCHHHCCCceEEEEEEec
Confidence 99999999999999986 34 53 467889999999999999985 778899999999999997
Q ss_pred CCceEEEcCCC
Q 031590 131 MTRWLSLVGLV 141 (157)
Q Consensus 131 kd~T~i~~g~g 141 (157)
+++++++.|.+
T Consensus 354 ~~~~~~~~g~~ 364 (545)
T 1a6d_A 354 DDRMTFVMGCK 364 (545)
T ss_dssp TEEEEEEEEES
T ss_pred CceEEEEecCC
Confidence 57777776643
No 14
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=99.81 E-value=9.1e-21 Score=171.24 Aligned_cols=120 Identities=15% Similarity=0.186 Sum_probs=105.3
Q ss_pred CccCCcccccccCCCCCceEEeeCceEEeeccc-------------ccchHHH-----------HHHH--HhhcCCceEE
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENM-------------IVSKNIV-----------EQAI--AQADSRPLLI 54 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le~p~IL~td~k-------------Is~~~~i-----------lp~L--~~~~~rpLlI 54 (157)
|.||+||.||||. ..++||+||++|.+ |++.+++ .|.+ +.+.++||+|
T Consensus 219 ~v~dk~~~~~~m~------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi 292 (548)
T 1q3q_A 219 VVIDKEVVHPRMP------KRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVF 292 (548)
T ss_dssp EEESCCCSSTTSC------SEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEeccCCCCCCc------ceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEE
Confidence 6799999999991 24899999999999 9999997 8888 8899999999
Q ss_pred EecccccchhhhhhcccccCcceEE-eecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEEe---
Q 031590 55 VAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQ--- 130 (157)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~vt--- 130 (157)
++++|+++||.+|+.|+ ++ |+ +.|++.|+|||.+|||++++. ++++++++||+|+++.++
T Consensus 293 ~~~~I~~~al~~L~~~~------I~av~--------~~~k~~le~ia~~tGa~ii~~--l~~~~~~~LG~a~~v~~~~ig 356 (548)
T 1q3q_A 293 VQKGIDDLAQHYLAKYG------IMAVR--------RVKKSDMEKLAKATGAKIVTN--VKDLTPEDLGYAEVVEERKLA 356 (548)
T ss_dssp ESSCBCHHHHHHHHHTT------CEEEC--------SCCHHHHHHHHHHHCCCCBSS--GGGCCGGGCEEESEEEEEEET
T ss_pred EcCCcCHHHHHHHHHCC------cEEEc--------cCCHHHHHHHHHHhCCeEecc--cccCCHHHCCCceEEEEEEec
Confidence 99999999999999986 34 53 467889999999999999985 778899999999999997
Q ss_pred CCceEEEcCCCC
Q 031590 131 MTRWLSLVGLVA 142 (157)
Q Consensus 131 kd~T~i~~g~g~ 142 (157)
+++++++.|.++
T Consensus 357 ~~~~~~~~g~~~ 368 (548)
T 1q3q_A 357 GENMIFVEGCKN 368 (548)
T ss_dssp TEEEEEEECCSS
T ss_pred CceEEEEecCCC
Confidence 788888877543
No 15
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=99.80 E-value=1.9e-20 Score=168.92 Aligned_cols=119 Identities=14% Similarity=0.172 Sum_probs=103.7
Q ss_pred CccCCcccccccCCCCCceEEeeCceEEeeccc-------------ccchHHH-----------HHHH--HhhcCCceEE
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENM-------------IVSKNIV-----------EQAI--AQADSRPLLI 54 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le~p~IL~td~k-------------Is~~~~i-----------lp~L--~~~~~rpLlI 54 (157)
|.|||||.||||. ..++||+||++|.+ |++.+++ .|.+ +.+.++||+|
T Consensus 217 ~v~dk~~~~~~m~------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi 290 (543)
T 1a6d_B 217 IIVDKEKVHPGMP------DVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVI 290 (543)
T ss_dssp EEESCCCSSTTSC------SEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEecCCCCCCCc------ceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 6799999999991 24899999999999 9999997 8888 8899999999
Q ss_pred EecccccchhhhhhcccccCcceEE-eecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEEe---
Q 031590 55 VAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQ--- 130 (157)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~vt--- 130 (157)
++++|+++||.+|+.|+ ++ |+ +.|+..|+|||.+|||++++. ++++++++||+|+++.+.
T Consensus 291 ~~~~I~~~al~~L~~~~------I~av~--------~v~k~~le~ia~~tGa~iis~--l~~l~~~~LG~a~~v~~~~ig 354 (543)
T 1a6d_B 291 TQKGIDDMAQHYLSRAG------IYAVR--------RVKKSDMDKLAKATGASIVST--IDEISSSDLGTAERVEQVKVG 354 (543)
T ss_dssp ESSCBCHHHHHHHHHTT------CEEEC--------SCCHHHHHHHHHHHTCCEESC--GGGCCGGGCEEEEEEEEEEET
T ss_pred ECCCcCHHHHHHHHHCC------eeEec--------cCCHHHHHHHHHHhCCceecc--cccCCHHHCCCceEEEEEEec
Confidence 99999999999999986 34 54 457889999999999999985 778889999999999997
Q ss_pred CCceEEEcCCC
Q 031590 131 MTRWLSLVGLV 141 (157)
Q Consensus 131 kd~T~i~~g~g 141 (157)
+++++++.|.+
T Consensus 355 ~~~~~~~~g~~ 365 (543)
T 1a6d_B 355 EDYMTFVTGCK 365 (543)
T ss_dssp TEEEEEEEEES
T ss_pred CceEEEEecCC
Confidence 77777776643
No 16
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=99.80 E-value=2e-20 Score=170.81 Aligned_cols=132 Identities=17% Similarity=0.178 Sum_probs=98.3
Q ss_pred CccCCcccccccCCCCCceEEeeCceEEeecc-----c--------ccchHHHHHHH-H------------hhcCCceEE
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILEN-----M--------IVSKNIVEQAI-A------------QADSRPLLI 54 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le~p~IL~td~-----k--------Is~~~~ilp~L-~------------~~~~rpLlI 54 (157)
|.||+|+ +++ +|..+++||+||++|. | |++++++.|+| . .+ .+|+||
T Consensus 223 mvfdk~~-----~~~-~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~-~g~~vI 295 (590)
T 3p9d_C 223 VLLNKDV-----VHP-KMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILA-VRPTLV 295 (590)
T ss_dssp EEECCCC-----SCT-TSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHT-TCCSEE
T ss_pred EEEeccc-----CCC-CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHh-cCCcEE
Confidence 3566663 455 6888999999999999 5 67788888877 2 23 369999
Q ss_pred Eecc-cccchhhhhhcccccCcceEEeecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCce-eeEEE---E
Q 031590 55 VAED-VEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGS-CKELL---Y 129 (157)
Q Consensus 55 IAed-v~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~-a~~v~---v 129 (157)
||++ |+++|+.+|+-|++ + .||+.|++.|+|||++|||++++. ++++++++||+ |+++. +
T Consensus 296 I~e~~I~d~Al~~L~k~~I----------~---av~~~~k~~le~ia~~TGa~iis~--l~~~~~~~LG~~a~~v~~~~i 360 (590)
T 3p9d_C 296 ITEKGVSDLAQHYLLKGGC----------S---VLRRVKKSDNNRIARVTGATIVNR--VEDLKESDVGTNCGLFKVEMI 360 (590)
T ss_dssp CCSSCCCTHHHHHHHHTTC----------C---CCCCCCHHHHHHHHHHHTCCCCSC--STTCCTTSCBCCCSEEECCEE
T ss_pred EecCCcCHHHHHHHHhccc----------e---eeccCCHHHHHHHHHHhCCceeec--ccCCCHHHhCCcCCEEEEEEE
Confidence 9999 99999999987642 4 678889999999999999999985 78899999999 99996 6
Q ss_pred eCCceEEEcCCCChHH--------------------------HHHHHHHhh
Q 031590 130 QMTRWLSLVGLVASLL--------------------------LKKDVHRFF 154 (157)
Q Consensus 130 tkd~T~i~~g~g~~~~--------------------------I~~Rv~qi~ 154 (157)
++|+|+++.|.++++. |++|++||-
T Consensus 361 g~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~ 411 (590)
T 3p9d_C 361 GDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKIS 411 (590)
T ss_dssp TTEECEEECC-----------------------------------------
T ss_pred cCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHH
Confidence 8899999999998888 999999874
No 17
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=99.80 E-value=4.2e-20 Score=166.73 Aligned_cols=122 Identities=14% Similarity=0.100 Sum_probs=103.3
Q ss_pred CccCCcccccccCCCCCceEEeeCceEEeecc-------------cccchHH-----------HHHHH--HhhcCCceEE
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILEN-------------MIVSKNI-----------VEQAI--AQADSRPLLI 54 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le~p~IL~td~-------------kIs~~~~-----------ilp~L--~~~~~rpLlI 54 (157)
|+|||||+|||| ..+++||+||++|. +|+++++ +.|.+ +.+.+.||+|
T Consensus 212 ~v~dk~~~~~~m------~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi 285 (543)
T 3ruv_A 212 VLVDKERVSAQM------PKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLF 285 (543)
T ss_dssp EEESCCCSCTTS------CSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred eEEeccccCccc------cccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 679999999998 33689999999999 7899988 56666 7888999999
Q ss_pred EecccccchhhhhhcccccCcceEEeecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEEe---C
Q 031590 55 VAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQ---M 131 (157)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~vt---k 131 (157)
++++|+++|+.+|+ .+|.+. |+.. |+..|+|||.+|||++++. ++++++++||+|+++.++ +
T Consensus 286 ~~~~I~~~al~~L~---~~gI~~--v~~v--------~k~~le~ia~~tGa~iis~--l~~l~~~~LG~a~~v~~~~ig~ 350 (543)
T 3ruv_A 286 CQKGIDDLAQHYLA---KEGIVA--ARRV--------KKSDMEKLAKATGANVIAA--IAALSAQDLGDAGLVEERKISG 350 (543)
T ss_dssp ESSCBCHHHHHHHH---HTTCEE--ECSC--------CHHHHHHHHHHHCCCEESC--GGGCCGGGCEEEEEEEEEEETT
T ss_pred EeCCccHHHHHHHH---HcCcEE--EeeC--------CHHHHHHHHHHhCCceecc--cccCCHHHCCcccEEEEEEeCC
Confidence 99999999999997 356543 4433 4678999999999999986 778899999999999988 7
Q ss_pred CceEEEcCCCCh
Q 031590 132 TRWLSLVGLVAS 143 (157)
Q Consensus 132 d~T~i~~g~g~~ 143 (157)
|+++++.|.+++
T Consensus 351 ~~~~~i~g~~~~ 362 (543)
T 3ruv_A 351 DSMIFVEECKHP 362 (543)
T ss_dssp EEEEEEECCSSC
T ss_pred ceEEEEECCCCC
Confidence 888888886653
No 18
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=99.79 E-value=9.8e-20 Score=164.86 Aligned_cols=122 Identities=15% Similarity=0.156 Sum_probs=103.0
Q ss_pred CccCCcccccccCCCCCceEEeeCceEEeecc-------------cccchHH-----------HHHHH--HhhcCCceEE
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILEN-------------MIVSKNI-----------VEQAI--AQADSRPLLI 54 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le~p~IL~td~-------------kIs~~~~-----------ilp~L--~~~~~rpLlI 54 (157)
|.|||||+|||| ..+++||+||++|. +|++.++ +.|.+ +.+.|.||+|
T Consensus 226 ~v~dk~~~~~~m------~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI 299 (553)
T 3ko1_A 226 IVVDKEVVHPGM------PKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVII 299 (553)
T ss_dssp EEECSCBSCTTS------CSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred EEecccccCCCC------ccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEE
Confidence 689999999998 22589999999999 7899998 55666 7889999999
Q ss_pred EecccccchhhhhhcccccCcceEEeecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEEe---C
Q 031590 55 VAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQ---M 131 (157)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~vt---k 131 (157)
++++|+++||.+|+ .+|.+. |+.. |+..|+|||.+|||++++. ++++++++||+|+++.++ +
T Consensus 300 ~~~~I~~~al~~L~---~~gI~~--v~~v--------~k~~leria~~tGa~ivs~--l~~l~~~~LG~a~~v~~~~ig~ 364 (553)
T 3ko1_A 300 CQKGIDEVAQSYLA---KKGVLA--VRRA--------KKSDLEKLARATGGRVVSN--IDEISEQDLGYASLIEERKVGE 364 (553)
T ss_dssp CSSCBCSHHHHHHH---HHTCEE--ECCC--------CHHHHHHHHTTTTCCEESC--GGGCCSSSSEECSEEECCCCSS
T ss_pred eccChHHHHHHHHH---hcchhh--hhhh--------hhhhHHHHHHhhCCeeecc--cccCChhhcchHHHHHHhhcCc
Confidence 99999999999997 356543 4433 4678999999999999985 778899999999999987 8
Q ss_pred CceEEEcCCCCh
Q 031590 132 TRWLSLVGLVAS 143 (157)
Q Consensus 132 d~T~i~~g~g~~ 143 (157)
|+++++.|.+++
T Consensus 365 d~~~~i~g~~~~ 376 (553)
T 3ko1_A 365 DKMVFVEGAKNP 376 (553)
T ss_dssp SCCEEEESCSSS
T ss_pred ceEEEeccCCCC
Confidence 888888876553
No 19
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.76 E-value=1e-18 Score=156.84 Aligned_cols=121 Identities=11% Similarity=0.148 Sum_probs=100.5
Q ss_pred CccCCcccccccCCCCCceEEeeCceEEeecccc-------------------------------cchHHHHHHH--H-h
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENMI-------------------------------VSKNIVEQAI--A-Q 46 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le~p~IL~td~kI-------------------------------s~~~~ilp~L--~-~ 46 (157)
|.||+||+|||| ..+++||+||++|.++ +.+++|+|++ + .
T Consensus 202 ~v~dk~~~~p~m------~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~ 275 (517)
T 3iyg_Z 202 LVLDHGARHPDM------KKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCG 275 (517)
T ss_pred EEEeccCCCCCc------cccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 689999999985 5679999999999987 3578888888 3 4
Q ss_pred hcCCceEEEe-cccccchhhhhhcccccCcceEEeecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCC-Ccee
Q 031590 47 ADSRPLLIVA-EDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLM-LGSC 124 (157)
Q Consensus 47 ~~~rpLlIIA-edv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~-LG~a 124 (157)
+.++|||||+ ++|+++|+..|..| |.+. |+.. ++..|+|||.+|||++++. ++++++++ ||+|
T Consensus 276 ~~~~~lvIi~~~~I~d~al~~L~~~---gI~~--v~~v--------~~~~leria~~tGa~iv~~--l~~l~~~~~LG~a 340 (517)
T 3iyg_Z 276 DSDKGFVVINQKGIDPFSLDALAKE---GIIA--LRRA--------KRRNMERLTLACGGIALNS--LDDLNPDCLLGHA 340 (517)
T ss_pred ccCCceEEEecccCCHHHHHHHHHC---CCEE--EEec--------CHHHHHHHHHHhCCEEecc--hhhCcccccCCcc
Confidence 5789999998 99999999999875 4332 5655 1456999999999999985 77889999 9999
Q ss_pred eEE---EEeCCceEEEcCCCCh
Q 031590 125 KEL---LYQMTRWLSLVGLVAS 143 (157)
Q Consensus 125 ~~v---~vtkd~T~i~~g~g~~ 143 (157)
+ + .+.+++++++.|.+++
T Consensus 341 ~-v~e~~ig~~~~~~~~g~~~~ 361 (517)
T 3iyg_Z 341 G-VYEYTLGEEKFTFIEKCNNP 361 (517)
T ss_pred e-EEEEEEcCceEEEEeCCCCc
Confidence 9 9 8889999888886654
No 20
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=99.76 E-value=1.3e-18 Score=156.48 Aligned_cols=109 Identities=11% Similarity=0.014 Sum_probs=94.8
Q ss_pred CccCCcccccccCCCCCceEEeeCceEEeeccccc-------------chHH-----------HHHHH--HhhcCCceEE
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENMIV-------------SKNI-----------VEQAI--AQADSRPLLI 54 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le~p~IL~td~kIs-------------~~~~-----------ilp~L--~~~~~rpLlI 54 (157)
|.||+||+|||| |..+++||+||++|.+++ +.++ ++|.+ +.+.|.||+|
T Consensus 213 ~v~dk~~~~~~~-----m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi 287 (528)
T 3p9d_D 213 VVLTQTAIKSAG-----GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLL 287 (528)
T ss_dssp CBCCCCCCCSSS-----CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEeecccCccc-----CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 789999999998 566899999999999987 5554 78888 8899999999
Q ss_pred Eeccc-----ccchhhhhhcccccCcceEE-eecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEE
Q 031590 55 VAEDV-----EDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELL 128 (157)
Q Consensus 55 IAedv-----~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~ 128 (157)
++++| +++||..|+.|+ ++ |+-+ |+..|+|||.+|||+++++ ++++++++||+|+++.
T Consensus 288 ~~~~I~~~a~~~~al~~L~~~~------I~av~~~--------~k~~le~ia~~tGa~ii~~--~~~l~~~~LG~a~~v~ 351 (528)
T 3p9d_D 288 IQKSILRDAVNDLALHFLSKLN------IMVVKDI--------EREEIEFLSKGLGCKPIAD--IELFTEDRLDSADLVE 351 (528)
T ss_dssp ESSCSCTTSCSCHHHHHHTTTS------CCEEECC--------CTHHHHHHHHHHTCCCCSC--STTCCSSSEEEESCEE
T ss_pred EeCCcccccCCHHHHHHHHHcC------cEEEEeC--------CHHHHHHHHHHHCCEEecc--cccCCHHHCCcccEEE
Confidence 99999 888888888775 34 7766 3667999999999999987 5788899999999998
Q ss_pred Ee
Q 031590 129 YQ 130 (157)
Q Consensus 129 vt 130 (157)
++
T Consensus 352 ~~ 353 (528)
T 3p9d_D 352 EI 353 (528)
T ss_dssp CC
T ss_pred EE
Confidence 77
No 21
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=99.76 E-value=1.3e-18 Score=155.93 Aligned_cols=116 Identities=19% Similarity=0.182 Sum_probs=99.1
Q ss_pred CccCCcccccccCCCCCceEEeeCceEEeecc--------------cccchHHHHH-----------HH--HhhcCCceE
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILEN--------------MIVSKNIVEQ-----------AI--AQADSRPLL 53 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le~p~IL~td~--------------kIs~~~~ilp-----------~L--~~~~~rpLl 53 (157)
|.||+||.|| |..+++||+||++|. +|++.+++.| .+ +.+.|+||+
T Consensus 205 ~v~dk~~~~~-------m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vv 277 (513)
T 3iyg_B 205 FLLDKKIGVN-------QPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCF 277 (513)
T ss_pred EEEeccccCC-------CceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 6899999988 566899999999998 7999999987 45 788999999
Q ss_pred EEecccccchhhhhhcccccCcceEE-eecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEE---E
Q 031590 54 IVAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELL---Y 129 (157)
Q Consensus 54 IIAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~---v 129 (157)
|++++|+++||..|.- .+++ ||.| +|. .|+|||.+|||++++. ++++++++||+|+++. +
T Consensus 278 i~~~~I~~~al~~L~~------~~I~av~~~---~~~-----~le~ia~~tGa~ii~~--l~~l~~~~LG~a~~v~~~~i 341 (513)
T 3iyg_B 278 INRQLIYNYPEQLFGA------AGVMAIEHA---DFV-----GVERLALVTGGEIAST--FDHPELVKLGSCKLIEEVMI 341 (513)
T ss_pred EEcCCccHHHHHHHHH------cCceEEecC---CHH-----HHHHHHHHhCCEEecc--cccCCHhHCCcccEEEEEEE
Confidence 9999999999998874 4567 9999 774 4899999999999985 6788999999999998 5
Q ss_pred eCCceEEEcC
Q 031590 130 QMTRWLSLVG 139 (157)
Q Consensus 130 tkd~T~i~~g 139 (157)
..++++++.|
T Consensus 342 g~~~~~~~~g 351 (513)
T 3iyg_B 342 GEDKLIHFSG 351 (513)
T ss_pred CCeEEEEEec
Confidence 5666555554
No 22
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.75 E-value=2.9e-18 Score=153.87 Aligned_cols=115 Identities=14% Similarity=0.118 Sum_probs=101.6
Q ss_pred CccCCcccc--ccc-CCCCC--ceEEeeCceEEeecc--cccchH-----------HHHHHH--HhhcCCceEEE-----
Q 031590 1 MKLKWRPVS--SYF-TNQKA--KDCVLENPFLLILEN--MIVSKN-----------IVEQAI--AQADSRPLLIV----- 55 (157)
Q Consensus 1 m~fdrGylS--pyf-td~~~--~~~~le~p~IL~td~--kIs~~~-----------~ilp~L--~~~~~rpLlII----- 55 (157)
|+||+||.| ||+ +|++- ..+.||+|++. ++. +|++++ .++|.+ +.+.|+||+|+
T Consensus 206 ~~~dk~~~~~mp~~i~n~kIlll~~~Le~~k~~-~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~ 284 (518)
T 3iyg_D 206 LVLTQKVANSGITRVEKAKIGLIQFCLSAPKTD-MDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSIL 284 (518)
T ss_pred EEEecccccCCCccccCceEEEEEeeccccccc-cCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecccc
Confidence 689999999 999 99887 68999999998 788 688886 478888 88999999999
Q ss_pred ecccccchhhhhhcccccCcceEE-eecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEEeCC
Q 031590 56 AEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQMT 132 (157)
Q Consensus 56 Aedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~vtkd 132 (157)
+++|+++||.+|+.|+ ++ ||.| ++++ |+|||.+|||+++++ ++++++++||+|+++.+.+.
T Consensus 285 ~~~I~~~Al~~L~~~~------I~av~~~---~~~~-----le~ia~~tGa~ii~~--l~~l~~~~LG~a~~v~~~~~ 346 (518)
T 3iyg_D 285 RDALSDLALHFLNKMK------IMVVKDI---ERED-----IEFICKTIGTKPVAH--VDQFTADMLGSAELAEEVSL 346 (518)
T ss_pred ccCcCHHHHHHHHHcC------cEEEecC---CHHH-----HHHHHHHhCCEEecc--cccCCHHHCCcCcEEEEEEe
Confidence 9999999999999873 56 9999 7754 899999999999988 67889999999999988654
No 23
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.72 E-value=8e-18 Score=151.33 Aligned_cols=121 Identities=15% Similarity=0.163 Sum_probs=100.7
Q ss_pred CccCCccccccc-CCCCCceEEeeCceEEeecccc-------------------cchHH-----HHHHH--HhhcCCceE
Q 031590 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMI-------------------VSKNI-----VEQAI--AQADSRPLL 53 (157)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~~le~p~IL~td~kI-------------------s~~~~-----ilp~L--~~~~~rpLl 53 (157)
|.||+||.|||| + .++||+|+++|..+ +++.+ +.|.+ +.+.|.+|+
T Consensus 208 ~v~dk~~~~~~m~~-------~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvv 280 (529)
T 3iyg_A 208 YALNCVVGSQGMPK-------RIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVI 280 (529)
T ss_pred eEEecCcccccCCc-------ccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 689999999999 7 47899999999943 33332 77777 889999999
Q ss_pred EEecccccchhhhhhcccccCcceEE-eecCCCCCchhhHhhhhhhhhhhhCcEEeec---cc-cCCCCCCCCceeeEEE
Q 031590 54 IVAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---AT-NVSFMPLMLGSCKELL 128 (157)
Q Consensus 54 IIAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~---~~-l~~v~~~~LG~a~~v~ 128 (157)
|++++|+++|+.+|+.|+ ++ |+. .|+..|++||.+|||+++++ ++ ++++++++||+|+++.
T Consensus 281 i~~~~I~d~al~~L~~~g------I~av~~--------v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~ 346 (529)
T 3iyg_A 281 LTTGGIDDMCLKYFVEAG------AMAVRR--------VLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVV 346 (529)
T ss_pred EECCCCCHHHHHHHHHcC------Cceecc--------CCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEE
Confidence 999999999999999995 34 553 46778999999999999998 33 4678899999999998
Q ss_pred ---EeCCceEEEcCCCC
Q 031590 129 ---YQMTRWLSLVGLVA 142 (157)
Q Consensus 129 ---vtkd~T~i~~g~g~ 142 (157)
+.+++++++.|.++
T Consensus 347 ~~~ig~~~~~~~~g~~~ 363 (529)
T 3iyg_A 347 QERICDDELILIKNTKA 363 (529)
T ss_pred EEEeCCceEEEEEcCCC
Confidence 88888888887554
No 24
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=99.71 E-value=1.6e-18 Score=156.40 Aligned_cols=121 Identities=12% Similarity=0.210 Sum_probs=94.4
Q ss_pred CccCCcccccccCCCCCceEEeeCceEEeeccccc-------------------------------chHHHHHHH--Hhh
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENMIV-------------------------------SKNIVEQAI--AQA 47 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le~p~IL~td~kIs-------------------------------~~~~ilp~L--~~~ 47 (157)
|.||+||.||+ |..+++||+||++|.+++ .+++|+|++ +.+
T Consensus 213 ~v~dk~~~~~~------m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~ 286 (546)
T 3p9d_F 213 LVLDHGGRHPD------MPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCG 286 (546)
T ss_dssp CEESCCCCSSS------SCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred EEEeccccccc------CcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 67999999995 456799999999984432 467788877 455
Q ss_pred --cCCceEEEec-ccccchhhhhhcccccCcceEEeecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCcee
Q 031590 48 --DSRPLLIVAE-DVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSC 124 (157)
Q Consensus 48 --~~rpLlIIAe-dv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a 124 (157)
.++|+|||++ +|+++||.+|+.|++ .+|+.. . +..|+|||.+|||++++. ++++++++||+|
T Consensus 287 ~~~g~~~vIi~~k~I~~~Al~~L~~~gI-----~~vr~v-------~-~~~leria~~tGa~ii~~--l~~l~~~~LG~a 351 (546)
T 3p9d_F 287 MDPDKGFVIINQKGIDPMSLDVFAKHNI-----LALRRA-------K-RRNMERLQLVTGGEAQNS--VEDLSPQILGFS 351 (546)
T ss_dssp ------CEEEESSCCCHHHHHHHTTTTC-----EEECCC-------C-HHHHHHHHHTTTBCCCCC--CSSCSTTCCBCC
T ss_pred hccCCceEEEecCcCcHHHHHHHHHCCC-----eeEecC-------C-HHHHHHHHHHhCCEEecc--hhhCCHhHCCcc
Confidence 7899999997 999999999999975 236766 2 347899999999999985 788999999999
Q ss_pred eEE---EEeCCceEEEcCCCC
Q 031590 125 KEL---LYQMTRWLSLVGLVA 142 (157)
Q Consensus 125 ~~v---~vtkd~T~i~~g~g~ 142 (157)
+++ .+++++++++.|.++
T Consensus 352 ~~v~~~~ig~~~~~~i~g~~~ 372 (546)
T 3p9d_F 352 GLVYQETIGEEKFTYVTENTD 372 (546)
T ss_dssp CCBCBCCCSSCCCEECSSCSC
T ss_pred cEEEEEEecCceEEEEecCCC
Confidence 999 788888888887554
No 25
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=99.70 E-value=2.3e-17 Score=149.22 Aligned_cols=121 Identities=14% Similarity=0.182 Sum_probs=98.7
Q ss_pred CccCCccccccc-CCCCCceEEeeCceEEeeccc-------------ccchHHHHHH-----------H--HhhcCCceE
Q 031590 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENM-------------IVSKNIVEQA-----------I--AQADSRPLL 53 (157)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~~le~p~IL~td~k-------------Is~~~~ilp~-----------L--~~~~~rpLl 53 (157)
|+|||||+|||| +++++ ++||+||++|.+ |++++++.|+ + +.+.+.+|+
T Consensus 218 ~~~dk~~~s~yf~~~~~~----~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vV 293 (550)
T 3p9d_G 218 VAFKKTFSYAGFEQQPKK----FNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIV 293 (550)
T ss_dssp EEECCCSSCTTCSCSCSC----CSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEE
T ss_pred EEEeccccccccccCccc----ccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 689999999999 99886 999999999998 7888888884 4 678899999
Q ss_pred EEecccccchhhhhhcccccCcceEEeecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEE---e
Q 031590 54 IVAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLY---Q 130 (157)
Q Consensus 54 IIAedv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~v---t 130 (157)
|++++|++ +++..+| .+|.+.+ ++.|+..|++||..|||++++. ++++++++||+|+++.+ .
T Consensus 294 i~~~~I~d--la~~~L~-~~gI~~v----------~~v~k~~lerIa~~tGa~iis~--l~~l~~~~LG~a~~v~~~~ig 358 (550)
T 3p9d_G 294 LSKLPIGD--LATQFFA-DRNIFCA----------GRVSADDMNRVIQAVGGSIQST--TSDIKPEHLGTCALFEEMQIG 358 (550)
T ss_dssp EESSCCCH--HHHHTTG-GGTCEEE----------ECCCTTHHHHHHHHTCCCCBSS--GGGCCGGGCCCCSBCCCCCCS
T ss_pred EECCCccH--HHHHHHH-HcCCccc----------cCcCHHHHHHHHHHhCCceecc--hhhCCHHHcCCceEEEEEEeC
Confidence 99999985 6666777 4565432 3445678999999999999985 67788999999999987 4
Q ss_pred CCceEEEcCC
Q 031590 131 MTRWLSLVGL 140 (157)
Q Consensus 131 kd~T~i~~g~ 140 (157)
+++++++.|.
T Consensus 359 ~e~~~~~~g~ 368 (550)
T 3p9d_G 359 SERYNLFQGC 368 (550)
T ss_dssp SSCCEEEBCC
T ss_pred CeEEEEEecC
Confidence 5666666653
No 26
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.67 E-value=1.7e-16 Score=142.12 Aligned_cols=113 Identities=19% Similarity=0.170 Sum_probs=97.1
Q ss_pred CccCCccccccc-CCCC-CceEEeeCce-EEeeccc----ccchHHHHHH-------H------HhhcCCceEEEecccc
Q 031590 1 MKLKWRPVSSYF-TNQK-AKDCVLENPF-LLILENM----IVSKNIVEQA-------I------AQADSRPLLIVAEDVE 60 (157)
Q Consensus 1 m~fdrGylSpyf-td~~-~~~~~le~p~-IL~td~k----Is~~~~ilp~-------L------~~~~~rpLlIIAedv~ 60 (157)
|+|||||.| | ++.+ .+.+.|+.|| ++.+|.| |++++|++|+ | +.+.|+||+|++++|+
T Consensus 205 ~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~ 282 (512)
T 3iyg_Q 205 MVFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVA 282 (512)
T ss_pred EEEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCcc
Confidence 689999987 8 8777 6777899999 9999999 9999999998 5 5678999999999998
Q ss_pred cchhhhhhcccccCcceEE-eecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEEeC
Q 031590 61 DKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQM 131 (157)
Q Consensus 61 ~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~vtk 131 (157)
+.++. .+|+ .+++ ||.| ++++ |+|||.+|||++++. ++++++++||+|+++.+++
T Consensus 283 ~la~~--~l~k----~~I~av~~~---~~~d-----le~ia~~tGa~iis~--l~~~~~~~LG~a~~v~~~~ 338 (512)
T 3iyg_Q 283 DMALH--YANK----YNIMLVRLN---SKWD-----LRRLCKTVGATALPR--LNPPVLEEMGHCDSVYLSE 338 (512)
T ss_pred HHHHH--HHHH----CCeEEEEeC---CHHH-----HHHHHHHhCCEEecc--cccCCHHHCCcccEEEEEE
Confidence 85544 3344 5678 9999 8766 899999999999985 7788899999999998875
No 27
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=99.66 E-value=2.9e-17 Score=147.51 Aligned_cols=116 Identities=21% Similarity=0.216 Sum_probs=96.4
Q ss_pred CccCCcccccccCCCCCceEEeeCceEEee------------ccc--ccchHHH-----------HHHH--HhhcCCceE
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLIL------------ENM--IVSKNIV-----------EQAI--AQADSRPLL 53 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le~p~IL~t------------d~k--Is~~~~i-----------lp~L--~~~~~rpLl 53 (157)
|+|||||.||| +++ ++||+||++ +.+ |++++++ +|.+ +.+.|.||+
T Consensus 212 ~~~dk~~~~~~---p~~----~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vv 284 (527)
T 3p9d_B 212 FILAKKFGNNQ---PKR----IENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTF 284 (527)
T ss_dssp CCCSCCCSSSC---CSC----CSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEE
T ss_pred EEEecccCCCC---Cee----eecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 78999999998 454 368888884 455 7788776 5777 788999999
Q ss_pred EEecccccchhhhhhcccccCcceEE-eecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEE---E
Q 031590 54 IVAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELL---Y 129 (157)
Q Consensus 54 IIAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~---v 129 (157)
|++++|++++|.+|..|+ ++ |+.| ++++ |++||..|||++++. +++++.++||+|+++. +
T Consensus 285 i~~~~I~~~al~~L~~~~------i~av~~~---~~~d-----le~ia~~tGa~iv~~--~~~~~~~~LG~a~~v~~~~i 348 (527)
T 3p9d_B 285 INRQLIYDYPEQLFTDLG------INSIEHA---DFEG-----VERLALVTGGEVVST--FDEPSKCKLGECDVIEEIML 348 (527)
T ss_dssp ESSCCCTTTHHHHHHHTC------BCCCCCC---HHHH-----HHHHHHHTCCCCCST--TSCCTTSCEECSBCCBCCCS
T ss_pred EECCCCCHHHHHHHHHCC------CEEEecC---CHHH-----HHHHHHHhCCEEecc--hhhCCHHHCCCCcEEEEEEe
Confidence 999999999999999886 45 9999 7776 899999999999987 6788899999999998 5
Q ss_pred eCCceEEEcC
Q 031590 130 QMTRWLSLVG 139 (157)
Q Consensus 130 tkd~T~i~~g 139 (157)
.+++++++.|
T Consensus 349 g~~~~~~~~g 358 (527)
T 3p9d_B 349 GEQPFLKFSG 358 (527)
T ss_dssp SSCCBCCBCS
T ss_pred cceEEEEEEC
Confidence 5666655554
No 28
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.65 E-value=1.9e-16 Score=142.03 Aligned_cols=120 Identities=11% Similarity=0.161 Sum_probs=97.0
Q ss_pred CccCCcccccccCCCCCceEEeeCceEEeecc-------------cccchHHHHHHH-H-----------hhcCCceEEE
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILEN-------------MIVSKNIVEQAI-A-----------QADSRPLLIV 55 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le~p~IL~td~-------------kIs~~~~ilp~L-~-----------~~~~rpLlII 55 (157)
|.||+||.||+| ..+++||+||++|. +|++++++.|+| . ....+|.|||
T Consensus 206 ~v~dk~~~~~~m------~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi 279 (515)
T 3iyg_G 206 VMINKDVTHPRM------RRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVI 279 (515)
T ss_pred EEEeCCCCCCCC------cceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 689999999954 56899999999999 999999999998 1 1235799999
Q ss_pred ecc-cccchhhhhhcccccCcceEEeecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCce-eeEEEEeCC-
Q 031590 56 AED-VEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGS-CKELLYQMT- 132 (157)
Q Consensus 56 Aed-v~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~-a~~v~vtkd- 132 (157)
+++ |++.|+..|.- ..++ .+++.|+..|+|||.+|||+++++ ++++++++||+ |+.+++++.
T Consensus 280 ~~~~I~~~al~~L~~------~~I~-------av~~~~k~~leria~~tGa~ii~~--l~~l~~~~LG~~a~~v~~~~~g 344 (515)
T 3iyg_G 280 TEKGISDLAQHYLMR------ANIT-------AIRRVRKTDNNRIARACGARIVSR--PEELREEDVGTGAGLLEIKKIG 344 (515)
T ss_pred ECCccCHHHHHHHHH------CCce-------eeccCCHHHHHHHHHHhCCeeecc--ccccChhhcCCcccEEEEEEEC
Confidence 996 88888887652 2233 346778899999999999999987 67888999999 999988764
Q ss_pred --ceEEEcCCC
Q 031590 133 --RWLSLVGLV 141 (157)
Q Consensus 133 --~T~i~~g~g 141 (157)
+++++.|.+
T Consensus 345 ~~~~~~i~g~~ 355 (515)
T 3iyg_G 345 DEYFTFITECK 355 (515)
T ss_pred CceEEEEeCCC
Confidence 566666543
No 29
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=99.50 E-value=5.8e-15 Score=133.94 Aligned_cols=115 Identities=11% Similarity=0.042 Sum_probs=93.6
Q ss_pred CccCCcccccccCCCCCceEEee---CceEEeeccc-------------ccchHHHHH-----------HH--HhhcCCc
Q 031590 1 MKLKWRPVSSYFTNQKAKDCVLE---NPFLLILENM-------------IVSKNIVEQ-----------AI--AQADSRP 51 (157)
Q Consensus 1 m~fdrGylSpyftd~~~~~~~le---~p~IL~td~k-------------Is~~~~ilp-----------~L--~~~~~rp 51 (157)
|.|||||. +|..+++ ||+||++|.+ |++.+++.| .+ +.+.+.|
T Consensus 226 ~v~dk~~~--------~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~ 297 (568)
T 3p9d_H 226 MVFNREPE--------GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVE 297 (568)
T ss_dssp CCBSSCBS--------SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEeeccc--------CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 56777772 4555677 9999999998 889999988 45 6788999
Q ss_pred eEEEecccccchhhhhhcccccCcceEE-eecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEEe
Q 031590 52 LLIVAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQ 130 (157)
Q Consensus 52 LlIIAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~vt 130 (157)
|+|++++|+++|+..|+-|+ ++ ||.| ++ ..|++||.+|||+++++ ++++++++||+|+++.++
T Consensus 298 vvi~~~~I~~~al~~L~~~g------I~av~~v---~~-----~~leria~~tGa~ivs~--l~~l~~~~LG~a~~v~~~ 361 (568)
T 3p9d_H 298 CIVAGAGVGELALHYLNRYG------ILVLKVP---SK-----FELRRLCRVCGATPLPR--LGAPTPEELGLVETVKTM 361 (568)
T ss_dssp EEEECSCCCHHHHHHHHHHT------CEEECCC---CH-----HHHHHHHHHHSCCCCSS--SSCCCGGGCEECSCCCCC
T ss_pred EEEECCCcChHHHHHHHHCC------eEEEecC---CH-----HHHHHHHHHhCCEEEec--cccCCHHHCCcceEEEEE
Confidence 99999999999999998763 56 9999 53 45999999999999987 677889999999998776
Q ss_pred C---CceEEEcC
Q 031590 131 M---TRWLSLVG 139 (157)
Q Consensus 131 k---d~T~i~~g 139 (157)
+ ++++++.|
T Consensus 362 ~ig~~~~~~~~g 373 (568)
T 3p9d_H 362 EIGGDRVTVFKQ 373 (568)
T ss_dssp EETTEECBCCCC
T ss_pred EecCceEEEEec
Confidence 5 44444443
No 30
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=97.85 E-value=7.1e-05 Score=57.59 Aligned_cols=110 Identities=14% Similarity=0.212 Sum_probs=78.2
Q ss_pred ceEEeeCceEEeeccccc-------------chHHHHHHH-------------HhhcCCceEEEecccccchhhhhhccc
Q 031590 18 KDCVLENPFLLILENMIV-------------SKNIVEQAI-------------AQADSRPLLIVAEDVEDKLIGSLILGK 71 (157)
Q Consensus 18 ~~~~le~p~IL~td~kIs-------------~~~~ilp~L-------------~~~~~rpLlIIAedv~~eaL~tLv~Nk 71 (157)
|.-.++||.|++.|-.++ +..++..++ +.+.|--+++.-..|++.|+..|.=+.
T Consensus 15 mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~g 94 (159)
T 1ass_A 15 MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG 94 (159)
T ss_dssp SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESSCBCHHHHHHHHHTT
T ss_pred CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECCccCHHHHHHHHHCC
Confidence 444678999999987554 455555544 445677788888899999988765433
Q ss_pred ccCcceEEeecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCceeeEEEEe---CCceEEEcCCCC
Q 031590 72 TCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQ---MTRWLSLVGLVA 142 (157)
Q Consensus 72 ~rg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~a~~v~vt---kd~T~i~~g~g~ 142 (157)
+-+ |+-. ++.-|+-||-.|||++++. +++++.+.||+|..+... .++.+++.|..+
T Consensus 95 ----I~~-v~~v--------~~~dleria~atGa~iv~~--~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~ 153 (159)
T 1ass_A 95 ----IYA-VRRV--------KKSDMEKLAKATGAKIVTD--LDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN 153 (159)
T ss_dssp ----CEE-ECSC--------CHHHHHHHHHHHTCCCBSS--TTSCCTTSCEEEEEEEEEEETTEEEEEEESCC-
T ss_pred ----CEE-EccC--------CHHHHHHHHHHhCCeeeCc--cccCCcccCccceEEEEEEECCeEEEEEECCCC
Confidence 222 3333 1345789999999999987 567788999999998775 467788777543
No 31
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=97.30 E-value=0.00077 Score=52.51 Aligned_cols=108 Identities=11% Similarity=0.128 Sum_probs=71.7
Q ss_pred CceEEeeCceEEeeccccc-------------chHHHHHHH-------------HhhcCCceEEEecccccchhhhhhcc
Q 031590 17 AKDCVLENPFLLILENMIV-------------SKNIVEQAI-------------AQADSRPLLIVAEDVEDKLIGSLILG 70 (157)
Q Consensus 17 ~~~~~le~p~IL~td~kIs-------------~~~~ilp~L-------------~~~~~rpLlIIAedv~~eaL~tLv~N 70 (157)
+|.-.++||.|++.|-.++ +.+++-+++ +...|--+++.-..|++.|+..|.-+
T Consensus 20 ~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~ 99 (178)
T 1gml_A 20 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRA 99 (178)
T ss_dssp TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHT
T ss_pred CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEECCcccHHHHHHHHHC
Confidence 3555678999999887655 233333333 45567778888889999998877544
Q ss_pred cccCcceEEeecCCCCCchhhHhhhhhhhhhhhCcEEeeccccCCCCCCCCce-eeEEEEe---CCceEEEcC
Q 031590 71 KTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGS-CKELLYQ---MTRWLSLVG 139 (157)
Q Consensus 71 k~rg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~v~~~~LG~-a~~v~vt---kd~T~i~~g 139 (157)
. +-+ |+-. .+.-|+-||-.|||++++. +++++++.||+ |..+... .++.+++.|
T Consensus 100 g----I~~-vr~v--------~~~dleria~atGa~iv~~--~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~g 157 (178)
T 1gml_A 100 N----VTA-IRRV--------RKTDNNRIARACGARIVSR--PEELREDDVGTGAGLLEIKKIGDEYFTFITD 157 (178)
T ss_dssp T----CEE-ECCC--------CHHHHHHHHHHHCCCEESC--GGGCCGGGSBCCEEEEEEEEETTEEEEEEEE
T ss_pred C----CEE-EecC--------CHHHHHHHHHHhCCeEeCC--hhhCChhhhCCcccEEEEEEECCeEEEEEEC
Confidence 3 222 3333 1345789999999999987 45677889999 8888743 244444444
No 32
>2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A*
Probab=44.27 E-value=5 Score=30.17 Aligned_cols=26 Identities=23% Similarity=0.353 Sum_probs=23.4
Q ss_pred CchhhHhhhhhhhhhhhCcEEeeccc
Q 031590 87 DYEKETKAIMDDLAILTGGQVLNGAT 112 (157)
Q Consensus 87 gfG~~rk~~L~DiAilTGg~vi~~~~ 112 (157)
+.|..|++.|..+|.--|++|...++
T Consensus 22 kmG~sRr~fL~~la~~kGf~v~~~~S 47 (133)
T 2dun_A 22 RMGRSRRAFLTGLARSKGFRVLDACS 47 (133)
T ss_dssp HHCSHHHHHHHHHHHHHTEEECSSCC
T ss_pred CcCHHHHHHHHHHHHhcCCEeccccC
Confidence 78999999999999999999987744
No 33
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=39.38 E-value=14 Score=24.65 Aligned_cols=34 Identities=21% Similarity=0.103 Sum_probs=20.8
Q ss_pred hhcC-CceEEEecccccchhhhhhcccccCcceEE
Q 031590 46 QADS-RPLLIVAEDVEDKLIGSLILGKTCLQNKVS 79 (157)
Q Consensus 46 ~~~~-rpLlIIAedv~~eaL~tLv~Nk~rg~l~v~ 79 (157)
.+.+ --|+|||+|++++....+..-=....++++
T Consensus 23 i~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~ 57 (82)
T 3v7e_A 23 LKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVS 57 (82)
T ss_dssp HTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEE
T ss_pred HHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEE
Confidence 3444 489999999999755543322222346665
No 34
>2coe_A Deoxynucleotidyltransferase, terminal variant; BRCT domain, DNA polymerase, teminal deoxynucleotidyltransferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.80 E-value=22 Score=25.90 Aligned_cols=25 Identities=24% Similarity=0.227 Sum_probs=23.1
Q ss_pred CchhhHhhhhhhhhhhhCcEEeecc
Q 031590 87 DYEKETKAIMDDLAILTGGQVLNGA 111 (157)
Q Consensus 87 gfG~~rk~~L~DiAilTGg~vi~~~ 111 (157)
+.|..|.+++..+|...|++|.+.+
T Consensus 32 ~~g~~R~~~l~~l~r~~G~~V~~~l 56 (120)
T 2coe_A 32 KMGTTRRALLMELARRKGFRVENEL 56 (120)
T ss_dssp TTCHHHHHHHHHHHHHHTCEECSSC
T ss_pred ccchHHHHHHHHHHHHcCCEEeecc
Confidence 8899999999999999999998764
No 35
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=33.68 E-value=20 Score=28.83 Aligned_cols=69 Identities=12% Similarity=0.028 Sum_probs=43.1
Q ss_pred ccCCcccccccCCCCCceEEeeCceEEeecccccchHHHHHHH---HhhcC-CceEEEecccccchhhhhhccccc----
Q 031590 2 KLKWRPVSSYFTNQKAKDCVLENPFLLILENMIVSKNIVEQAI---AQADS-RPLLIVAEDVEDKLIGSLILGKTC---- 73 (157)
Q Consensus 2 ~fdrGylSpyftd~~~~~~~le~p~IL~td~kIs~~~~ilp~L---~~~~~-rpLlIIAedv~~eaL~tLv~Nk~r---- 73 (157)
.+-+|..||||-|. + .+.+|- ..+.+...| +...+ .+=+|++-+..|-.+++.+..++.
T Consensus 49 ~L~SG~~Sp~y~d~-~---ll~~p~---------~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g 115 (238)
T 3n2l_A 49 TLKSGRKSPYFFNA-G---LFNTGR---------DLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHD 115 (238)
T ss_dssp ECSSSCEEEEEECG-G---GCCBHH---------HHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSC
T ss_pred EecCCCcccEEEEC-C---CCCCHH---------HHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhC
Confidence 35689999999332 2 122332 133344444 22323 578999999999999999988862
Q ss_pred CcceEE-eecC
Q 031590 74 LQNKVS-IAKP 83 (157)
Q Consensus 74 g~l~v~-VkaP 83 (157)
-.++.+ ++-+
T Consensus 116 ~~vp~~~~RK~ 126 (238)
T 3n2l_A 116 VDTPYCFNRKE 126 (238)
T ss_dssp CCCBEEEECCC
T ss_pred CCccEEEEeec
Confidence 246777 6543
No 36
>2pt7_G HP1451, hypothetical protein; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori}
Probab=31.14 E-value=24 Score=26.71 Aligned_cols=32 Identities=9% Similarity=0.069 Sum_probs=26.2
Q ss_pred hhhcccccCcceEEeecCCCCCchhhHhhhhhhhhh
Q 031590 66 SLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAI 101 (157)
Q Consensus 66 tLv~Nk~rg~l~v~VkaP~~~gfG~~rk~~L~DiAi 101 (157)
.+++|+..+ ++|.+-+- +|=++|++.|+.+|.
T Consensus 63 ~~~vn~~~~-~~V~LDve---~YRerReetL~~lA~ 94 (152)
T 2pt7_G 63 FNWIHPTYG-YSIRLEIS---TFLQNQEKVMDTQLQ 94 (152)
T ss_dssp HHHHHHHHS-CEEEEEET---THHHHHHHHHHHHHH
T ss_pred HHHhhhcCC-ceEEEEhH---HhHHHHHHHHHHHHH
Confidence 366888766 66667778 999999999999985
No 37
>4a5z_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; 2.30A {Homo sapiens}
Probab=26.96 E-value=1e+02 Score=23.69 Aligned_cols=99 Identities=11% Similarity=0.186 Sum_probs=54.8
Q ss_pred cccccCCCCCceEEeeCceEEeecccccchHHHHHHH--HhhcCCceEEEecccccchhhhhhcccccCcceEE-eecCC
Q 031590 8 VSSYFTNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNKVS-IAKPH 84 (157)
Q Consensus 8 lSpyftd~~~~~~~le~p~IL~td~kIs~~~~ilp~L--~~~~~rpLlIIAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~ 84 (157)
..||+++ ...++.+++|||=.. ..++-++.++ +++.. +..-.+- ++.|+
T Consensus 27 Fg~YL~~-~~~~I~IeDPYIR~~----hQi~NfvrF~Ellvk~~-----------------------~~~~~I~L~T~~d 78 (163)
T 4a5z_A 27 FREYLNE-TVTEVWIEDPYIRHT----HQLYNFLRFCEMLIKRP-----------------------CKVKTIHLLTSLD 78 (163)
T ss_dssp HGGGCCT-TCCEEEEECSCCCSH----HHHHHHHHHHHHHHC-------------------------CCCCEEEEEECCC
T ss_pred HHHHHhC-CceEEEEECCccccH----HHHHHHHHHHHHHHhcC-----------------------CCccEEEEEeCCc
Confidence 4799944 345899999998432 3345555555 33331 1111133 77775
Q ss_pred CCCchhhHhhhhhhhhhhh--CcEEeeccccCCCCCCCCceeeEEEEeCCceEEEcCCC
Q 031590 85 EDDYEKETKAIMDDLAILT--GGQVLNGATNVSFMPLMLGSCKELLYQMTRWLSLVGLV 141 (157)
Q Consensus 85 ~~gfG~~rk~~L~DiAilT--Gg~vi~~~~l~~v~~~~LG~a~~v~vtkd~T~i~~g~g 141 (157)
++...+.+++.|+.|.--. .|-.+. ...++ + -..++|..+ +.++|.=|.|
T Consensus 79 ~~~~~~~Q~~~L~~ik~sL~~~gI~l~-~~fs~-t----iHDR~I~~d-nGW~IkiGRG 130 (163)
T 4a5z_A 79 EGIEQVQQSRGLQEIEESLRSHGVLLE-VQYSS-S----IHDREIRFN-NGWMIKIGRG 130 (163)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHTTCEEE-EEECT-T----CCCCEEEET-TSEEEEETTT
T ss_pred cccCHHHHHHHHHHHHHHHHHCCCEEE-EEeCC-C----ccceEEEec-CCeEEEECCC
Confidence 4335778889999986533 332221 22211 1 145565555 6788877766
No 38
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=25.39 E-value=21 Score=27.53 Aligned_cols=67 Identities=13% Similarity=-0.013 Sum_probs=42.7
Q ss_pred ccCCcccccccCCCCCceEEeeCceEEeecccccchHHHHHHH---Hhhc-CCceEEEecccccchhhhhhcccc----c
Q 031590 2 KLKWRPVSSYFTNQKAKDCVLENPFLLILENMIVSKNIVEQAI---AQAD-SRPLLIVAEDVEDKLIGSLILGKT----C 73 (157)
Q Consensus 2 ~fdrGylSpyftd~~~~~~~le~p~IL~td~kIs~~~~ilp~L---~~~~-~rpLlIIAedv~~eaL~tLv~Nk~----r 73 (157)
.+.+|.-||||-|. + ++.+.+ ..+.+...| +... ..|-+|++-+..|-.+++.+..++ .
T Consensus 24 ~l~SG~~s~~y~d~-~----------ll~~~~--~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~ 90 (213)
T 1lh0_A 24 TLKSGRKSPYFFNA-G----------LFNTGR--DLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHD 90 (213)
T ss_dssp ECTTSCEEEEEECG-G----------GCCBHH--HHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHC
T ss_pred EECCCCcccEEEec-C----------ccCCHH--HHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhC
Confidence 36689999999332 1 122221 234455555 3332 357899999999999999998888 2
Q ss_pred CcceEE-ee
Q 031590 74 LQNKVS-IA 81 (157)
Q Consensus 74 g~l~v~-Vk 81 (157)
-.++++ ++
T Consensus 91 ~~~~~~~~r 99 (213)
T 1lh0_A 91 KDLPYCFNR 99 (213)
T ss_dssp CCCBEEEEC
T ss_pred CCCCEEEEE
Confidence 246666 55
No 39
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=23.50 E-value=19 Score=28.77 Aligned_cols=65 Identities=8% Similarity=0.091 Sum_probs=36.7
Q ss_pred cCCccccccc-CCCCCceEEeeCceEEeecccccchHHHHHHH---Hhhc-CCceEEEecccccchhhhhhcccccCcce
Q 031590 3 LKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI---AQAD-SRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (157)
Q Consensus 3 fdrGylSpyf-td~~~~~~~le~p~IL~td~kIs~~~~ilp~L---~~~~-~rpLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (157)
+-.|..|||| ... ..+.+| .-.+.+...| +... ..+=+|++-+-.+-.+++.+..++. ++
T Consensus 49 l~SG~~Sp~Y~d~~----~~~~~p---------~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~--~p 113 (234)
T 3m3h_A 49 WSSGMKSPIYCDNR----LTLSYP---------KVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMD--LP 113 (234)
T ss_dssp CTTSCEESEEECGG----GGGGCH---------HHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHT--CC
T ss_pred cCcCCcCCEEEeCH----HhccCH---------HHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcC--CC
Confidence 4588899998 433 123333 1122344444 2222 2577999999999999998888875 45
Q ss_pred EE-eec
Q 031590 78 VS-IAK 82 (157)
Q Consensus 78 v~-Vka 82 (157)
.+ ++.
T Consensus 114 ~~~vrk 119 (234)
T 3m3h_A 114 MCYVRS 119 (234)
T ss_dssp EEEEC-
T ss_pred EEEEEE
Confidence 55 543
No 40
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=21.71 E-value=25 Score=28.23 Aligned_cols=65 Identities=15% Similarity=0.194 Sum_probs=37.8
Q ss_pred cCCccccccc-CCCCCceEEeeCceEEeecccccchHHHHHHH---Hhhc-CCceEEEecccccchhhhhhcccccCcce
Q 031590 3 LKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI---AQAD-SRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (157)
Q Consensus 3 fdrGylSpyf-td~~~~~~~le~p~IL~td~kIs~~~~ilp~L---~~~~-~rpLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (157)
+-.|..|||| ... ..+.+|- -.+.+...| +... ..+=+|++-+..+=.+++.+..++. ++
T Consensus 61 L~SG~~Sp~Y~d~~----~~l~~p~---------~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~--~p 125 (243)
T 3dez_A 61 WASGIKSPIYTDNR----ITLSYPE---------TRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMN--LP 125 (243)
T ss_dssp C---CEESEEECTT----GGGGCHH---------HHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTT--CC
T ss_pred eCCCCCCCEEEeCH----HhccCHH---------HHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcC--CC
Confidence 3478999988 543 1233441 122333333 2222 2577999999999999999888875 45
Q ss_pred EE-eec
Q 031590 78 VS-IAK 82 (157)
Q Consensus 78 v~-Vka 82 (157)
.+ ++.
T Consensus 126 ~~~vrk 131 (243)
T 3dez_A 126 LAYIRS 131 (243)
T ss_dssp EEEECS
T ss_pred EEEEEE
Confidence 55 543
No 41
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=20.49 E-value=62 Score=22.07 Aligned_cols=18 Identities=17% Similarity=0.342 Sum_probs=13.8
Q ss_pred CceEEEecccccchhhhh
Q 031590 50 RPLLIVAEDVEDKLIGSL 67 (157)
Q Consensus 50 rpLlIIAedv~~eaL~tL 67 (157)
--|+|||+|.++....-+
T Consensus 36 a~lViiA~D~~~~~~~~i 53 (101)
T 3v7q_A 36 AKLVLLTEDASSNTAKKV 53 (101)
T ss_dssp CSEEEEETTSCHHHHHHH
T ss_pred eeEEEEeccccccchhhh
Confidence 478899999988765554
No 42
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=20.35 E-value=36 Score=25.94 Aligned_cols=31 Identities=16% Similarity=0.130 Sum_probs=23.3
Q ss_pred CceEEEecccccchhhhhhcccccCcceEE-eec
Q 031590 50 RPLLIVAEDVEDKLIGSLILGKTCLQNKVS-IAK 82 (157)
Q Consensus 50 rpLlIIAedv~~eaL~tLv~Nk~rg~l~v~-Vka 82 (157)
.+.+|++-+-.|-.++..+..++. ++++ ++.
T Consensus 68 ~~d~vv~v~~~g~~~a~~la~~l~--~p~~~~rk 99 (211)
T 2aee_A 68 EVEVIAGTATAGIPHGAIIADKMT--LPFAYIRS 99 (211)
T ss_dssp TCCEEEEETTTTHHHHHHHHHHHT--CCEEEECS
T ss_pred CCCEEEEeccCcHHHHHHHHHHhC--CCEEEEEe
Confidence 578999999999888888888775 4444 443
Done!