Query 031593
Match_columns 157
No_of_seqs 114 out of 575
Neff 6.2
Searched_HMMs 13730
Date Mon Mar 25 03:37:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031593.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031593hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1j20a1 c.26.2.1 (A:1-165) Arg 7.0 1.1E+02 0.0077 18.5 1.9 15 43-58 151-165 (165)
2 d1iica1 d.108.1.2 (A:34-218) N 3.8 1E+02 0.0073 21.6 -0.0 8 102-109 4-11 (185)
3 d1d0qa_ g.41.3.2 (A:) Zinc-bin 3.6 2.3E+02 0.016 17.1 1.8 16 45-60 84-99 (102)
4 d1vs6z1 d.325.1.2 (Z:1-70) Rib 3.4 1.4E+02 0.01 17.4 0.5 6 102-107 40-45 (70)
5 d3boea1 c.154.1.1 (A:224-432) 3.3 1.4E+02 0.01 21.0 0.5 27 47-77 174-200 (209)
6 d2axoa1 c.47.1.19 (A:38-262) H 3.3 1.1E+02 0.0082 21.6 -0.1 13 98-110 37-50 (225)
7 d1wwia1 a.22.1.4 (A:1-148) Hyp 3.1 2.9E+02 0.021 18.5 2.0 16 69-84 105-120 (148)
8 d1iq0a1 a.27.1.1 (A:467-592) A 3.1 3.2E+02 0.024 16.8 2.2 17 91-107 62-78 (126)
9 d1r4va_ a.22.1.4 (A:) Hypothet 3.0 2.9E+02 0.021 18.5 2.0 14 71-84 111-124 (151)
10 d2icga1 d.369.1.1 (A:1-158) Un 3.0 3.5E+02 0.025 16.9 2.4 26 40-66 25-50 (158)
No 1
>d1j20a1 c.26.2.1 (A:1-165) Argininosuccinate synthetase, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=7.02 E-value=1.1e+02 Score=18.46 Aligned_cols=15 Identities=20% Similarity=0.306 Sum_probs=10.8
Q ss_pred HHhHHhHHhhcCCCCC
Q 031593 43 HIFSKHVLSHTGVQVP 58 (157)
Q Consensus 43 ~~~~~~~~~~~G~p~p 58 (157)
+...+|..+ .|+|+|
T Consensus 151 ~ei~~ya~~-~~iPvp 165 (165)
T d1j20a1 151 KEMIAYAEA-HGIPVP 165 (165)
T ss_dssp HHHHHHHHH-TTCCCC
T ss_pred HHHHHHHHH-hCCCCC
Confidence 346677665 999988
No 2
>d1iica1 d.108.1.2 (A:34-218) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=3.75 E-value=1e+02 Score=21.58 Aligned_cols=8 Identities=13% Similarity=0.198 Sum_probs=4.8
Q ss_pred hccCCCCC
Q 031593 102 LYDFYNYD 109 (157)
Q Consensus 102 ~H~FW~~~ 109 (157)
-|.||+.|
T Consensus 4 ~hkFW~tQ 11 (185)
T d1iica1 4 DHKFWRTQ 11 (185)
T ss_dssp CCTTGGGS
T ss_pred cCCCcCcC
Confidence 36777644
No 3
>d1d0qa_ g.41.3.2 (A:) Zinc-binding domain of DNA primase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=3.62 E-value=2.3e+02 Score=17.12 Aligned_cols=16 Identities=19% Similarity=0.306 Sum_probs=11.8
Q ss_pred hHHhHHhhcCCCCCch
Q 031593 45 FSKHVLSHTGVQVPDV 60 (157)
Q Consensus 45 ~~~~~~~~~G~p~p~~ 60 (157)
...++++..|+|+|..
T Consensus 84 Av~~La~~~gi~l~~~ 99 (102)
T d1d0qa_ 84 AAKRLAAKAGVDLSVY 99 (102)
T ss_dssp HHHHHHHHHTCCCGGG
T ss_pred HHHHHHHHhCCCCCCc
Confidence 4567777789999853
No 4
>d1vs6z1 d.325.1.2 (Z:1-70) Ribosomal protein L31p {Escherichia coli [TaxId: 562]}
Probab=3.37 E-value=1.4e+02 Score=17.39 Aligned_cols=6 Identities=17% Similarity=0.456 Sum_probs=4.6
Q ss_pred hccCCC
Q 031593 102 LYDFYN 107 (157)
Q Consensus 102 ~H~FW~ 107 (157)
-|+||.
T Consensus 40 ~HPfyT 45 (70)
T d1vs6z1 40 CHPFFT 45 (70)
T ss_dssp SCCBCC
T ss_pred CCCcCc
Confidence 489996
No 5
>d3boea1 c.154.1.1 (A:224-432) Cadmium-specific carbonic anhydrase CdCA1 {Thalassiosira weissflogii [TaxId: 67004]}
Probab=3.34 E-value=1.4e+02 Score=21.01 Aligned_cols=27 Identities=33% Similarity=0.573 Sum_probs=20.0
Q ss_pred HhHHhhcCCCCCchhHHHHHHHHHHHHHHHH
Q 031593 47 KHVLSHTGVQVPDVEIKYLVAAAIALKGIGG 77 (157)
Q Consensus 47 ~~~~~~~G~p~p~~~~~~~~~~~~~~el~gG 77 (157)
.+.++++++..|.. ++.++.-+|.+|+
T Consensus 174 ~Waa~KF~lDv~ky----lv~AAaTVE~L~~ 200 (209)
T d3boea1 174 GWAADKFGLDVPKF----LIAAAATVEMLGG 200 (209)
T ss_dssp HHHHHHTTCCHHHH----HHHHHHHHHHTTC
T ss_pred eeeccccCCchHHH----HHHHHHHHHHhCC
Confidence 35667789888876 7777778887663
No 6
>d2axoa1 c.47.1.19 (A:38-262) Hypothetical protein Atu2684 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=3.31 E-value=1.1e+02 Score=21.65 Aligned_cols=13 Identities=23% Similarity=0.378 Sum_probs=9.5
Q ss_pred HHHHhc-cCCCCCh
Q 031593 98 ATPILY-DFYNYDA 110 (157)
Q Consensus 98 tt~~~H-~FW~~~~ 110 (157)
..+.+| +||++-+
T Consensus 37 i~La~HVdYWd~lG 50 (225)
T d2axoa1 37 VGLSYHVDYWNYLG 50 (225)
T ss_dssp EEEEEECSTTCSSS
T ss_pred EEEEeccccccccC
Confidence 456788 8999853
No 7
>d1wwia1 a.22.1.4 (A:1-148) Hypothetical protein TTHA1479 {Thermus thermophilus [TaxId: 274]}
Probab=3.06 E-value=2.9e+02 Score=18.48 Aligned_cols=16 Identities=13% Similarity=0.264 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHhh
Q 031593 69 AIALKGIGGLLFIFGS 84 (157)
Q Consensus 69 ~~~~el~gGlll~~G~ 84 (157)
+..=+++||+.+++++
T Consensus 105 ~~LP~I~GgL~v~lAr 120 (148)
T d1wwia1 105 NLLPELAGALVVAYAR 120 (148)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHH
Confidence 3467899999999887
No 8
>d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]}
Probab=3.05 E-value=3.2e+02 Score=16.81 Aligned_cols=17 Identities=18% Similarity=0.089 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHhccCCC
Q 031593 91 LLLHQALATPILYDFYN 107 (157)
Q Consensus 91 La~f~v~tt~~~H~FW~ 107 (157)
++-|+.=-+=.||.||+
T Consensus 62 l~~yl~~La~~F~~fY~ 78 (126)
T d1iq0a1 62 LAQYLLDLAASWNAYYN 78 (126)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44455555566899994
No 9
>d1r4va_ a.22.1.4 (A:) Hypothetical protein Aq_328 {Aquifex aeolicus [TaxId: 63363]}
Probab=3.04 E-value=2.9e+02 Score=18.53 Aligned_cols=14 Identities=29% Similarity=0.501 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHhh
Q 031593 71 ALKGIGGLLFIFGS 84 (157)
Q Consensus 71 ~~el~gGlll~~G~ 84 (157)
.-+++||+.+++++
T Consensus 111 lp~I~GgL~v~lAr 124 (151)
T d1r4va_ 111 YRNIMGGLLLMHAD 124 (151)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHhHHHHHHHH
Confidence 56899999999877
No 10
>d2icga1 d.369.1.1 (A:1-158) Uncharacterized protein Lin2918 {Listeria innocua [TaxId: 1642]}
Probab=3.04 E-value=3.5e+02 Score=16.93 Aligned_cols=26 Identities=15% Similarity=0.105 Sum_probs=0.0
Q ss_pred hhHHHhHHhHHhhcCCCCCchhHHHHH
Q 031593 40 PKFHIFSKHVLSHTGVQVPDVEIKYLV 66 (157)
Q Consensus 40 p~~~~~~~~~~~~~G~p~p~~~~~~~~ 66 (157)
|........+++..|+++| .+++.++
T Consensus 25 ~at~E~I~~~E~~LG~~lP-~~Yr~fL 50 (158)
T d2icga1 25 TGTPELIKIYQDALGNEFP-ETYKLFL 50 (158)
T ss_dssp CCCHHHHHHHHHHHTCCCC-HHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCCC-HHHHHHH
Done!