BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031597
(156 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04616|Y4115_ARATH Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis
thaliana GN=At4g01150 PE=1 SV=1
Length = 164
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/146 (62%), Positives = 114/146 (78%), Gaps = 10/146 (6%)
Query: 1 MAATAYAAVLTPRVPSTTTVKVKSSHCFALPCLPPRS-STPPFSSSIKQVSES--RRFPL 57
+AA++ AV+ PRVP+ +T C A+P LPPRS F+ +K VS + ++ L
Sbjct: 5 VAASSSMAVMVPRVPAVST------RCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVEL 58
Query: 58 LQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSV 117
L+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV
Sbjct: 59 LKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSV 117
Query: 118 PLLPKLLELIGLGYTGWFVYRYLLFK 143
PLLPK++EL+GLGYTGWFVYRYLLFK
Sbjct: 118 PLLPKVMELVGLGYTGWFVYRYLLFK 143
>sp|Q8LCA1|TMP14_ARATH Thylakoid membrane phosphoprotein 14 kDa, chloroplastic
OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2
Length = 174
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%)
Query: 81 KEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVPLLPKLLELIGLGYTGWFVYRYL 140
+E W+ V++K + +VA+W S+ ++ AI+ +PL+P +LEL+G+GYTGWF Y+ L
Sbjct: 91 QEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNL 150
Query: 141 LFK 143
+FK
Sbjct: 151 VFK 153
>sp|Q119Z5|SYE_TRIEI Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101)
GN=gltX PE=3 SV=1
Length = 881
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 95 LYGGGAIVAVWLS--STIVGAINSVPLLPKLLELIGLGYTGWFVYRYLL 141
L+G A+V + + + ++ A++ +P+L + ELIG+ Y WFVYRYLL
Sbjct: 809 LFGWLALVILTFTFMAVVIEALDGIPILSIIFELIGVIYLVWFVYRYLL 857
>sp|Q8YX97|SYV_NOSS1 Valine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=valS PE=3 SV=1
Length = 1014
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 44 SSIKQVSESRRFPLLQ----VRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGGG 99
++++ SES R L+ ++ + ET T+ A + S + +K K+ L+ G
Sbjct: 796 ANLQTDSESERQILMAGQSYIKDLAKVETLTIAAGQQPSTVTKKKPQKGLKTIGLVIAGL 855
Query: 100 AIVAVWLSSTIVGAINSVPLLPKLLELIGLGYTGWFVYRYLL 141
+ V L+ + +++VP L E++GLGY+ WFV R LL
Sbjct: 856 VFLRVALA--VADTVDNVPFLGTFFEIVGLGYSAWFVTRNLL 895
>sp|B4EW02|RNB_PROMH Exoribonuclease 2 OS=Proteus mirabilis (strain HI4320) GN=rnb PE=3
SV=1
Length = 647
Score = 34.3 bits (77), Expect = 0.31, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 29 ALPCLPPRSSTPPFSSSIKQVSESRRFPLLQVRASSSEETSTV-DADELFS 78
A+PC P +S T PF+ V+E RR PL + +E T + D D+ F+
Sbjct: 111 AIPCRPIKSLTHPFADQDWAVAEMRRHPLKGDKHFQAELTDFITDKDDHFA 161
>sp|Q6DFG0|RH21A_XENLA Rho GTPase-activating protein 21-A OS=Xenopus laevis GN=arhgap21-a
PE=2 SV=1
Length = 1926
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 67 ETSTVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVPLLPKLLE 125
+ VD D +DLK K +A+ K + G I L S I+ + ++ P LPKLLE
Sbjct: 1434 DKQNVDKD---ADLKAKANALSFKDADNIKGTNIITEDKLESDIMHSESTSPCLPKLLE 1489
>sp|Q2YDN1|GP161_BOVIN G protein-coupled receptor 161 OS=Bos taurus GN=GPR161 PE=2 SV=1
Length = 528
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 32 CLPPRSSTPPFSSSIKQVSESRRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKS 91
C P R S+ F ++Q+ E+ + P+L V+A + D + L + A+E ++
Sbjct: 422 CPPKRRSSVTFEDEVEQIKEAAKNPILHVKADVHK-----SLDSYATSLAK---AIEAEA 473
Query: 92 TVLLYGGGAIVAVWLSSTIVGAIN 115
+ L+G A+ V L++ V I
Sbjct: 474 KINLFGEEALPGVLLTARTVPGIG 497
>sp|Q74JY4|MURG_LACJO UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Lactobacillus johnsonii (strain CNCM
I-12250 / La1 / NCC 533) GN=murG PE=3 SV=1
Length = 370
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 42 FSSSIKQVSESRRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGG 98
F + KQ SE ++ L++ S++ ++ + + D+ +KWD N TVL++GG
Sbjct: 147 FDDAAKQFSEKKK--LVKTGNPRSQQVLGLNKENI--DIAKKWDLNPNMPTVLIFGG 199
>sp|P79102|CP3AS_BOVIN Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1
Length = 507
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 33 LPPRSSTPPFSSSIKQVSESR-------RFPLLQVRASSSEETSTVDADELFSDLKEKWD 85
L P+S+ F+ S+K++ ESR R LLQ+ +S+ + +D + SD++
Sbjct: 240 LFPKSTVDFFTKSVKKIKESRLTDKQMNRVDLLQLMI-NSQNSKEIDNHKALSDIE---- 294
Query: 86 AVENKSTVLLYGGGAIVAVWLSSTI 110
+ +ST+ ++GG + LS I
Sbjct: 295 -LVAQSTIFIFGGYETTSSTLSFII 318
>sp|Q042P9|MURG_LACGA UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Lactobacillus gasseri (strain ATCC 33323
/ DSM 20243) GN=murG PE=3 SV=1
Length = 370
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 42 FSSSIKQVSESRRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGG 98
F + KQ SE ++ L++ S++ ++ D + DL +KW N TVL++GG
Sbjct: 147 FDDAAKQFSEKKK--LVKTGNPRSQQVLGLNKDNV--DLAKKWGLNPNMPTVLIFGG 199
>sp|P0CJ84|HTPG_BACFR Chaperone protein htpG OS=Bacteroides fragilis (strain YCH46)
GN=htpG PE=3 SV=1
Length = 681
Score = 30.8 bits (68), Expect = 3.9, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 37 SSTPPFSSSIKQVSESRRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLY 96
++ P + ++ V++ R + E+ TV+ DEL +DL +KWD ++ + +
Sbjct: 584 AAIAPIQTELEDVTKRRDALKKKQEGKKDEDIPTVEKDEL-NDLDKKWDELKQQKDSIFA 642
Query: 97 G 97
G
Sbjct: 643 G 643
>sp|Q03696|NGCA_CHICK Neuronal-glial cell adhesion molecule OS=Gallus gallus PE=1 SV=2
Length = 1266
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 11 TPRVPS--TTTVKVKSSHCFALPCLPPRSSTPP----FSSSIKQVSESRRFPLLQ 59
TP+ P T V+V+ LPC PP S+ PP +S I +++ R + Q
Sbjct: 131 TPQWPKEKVTPVEVEEGDPVVLPCDPPESAVPPKIYWLNSDIVHIAQDERVSMGQ 185
>sp|Q9RNV1|FTSK_SPOUR DNA translocase FtsK OS=Sporosarcina ureae GN=ftsK PE=3 SV=1
Length = 780
Score = 30.0 bits (66), Expect = 6.1, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 22 VKSSHCFALPCLPPRSSTPPFSSSIKQVSESRRFPLLQVRASSSEETSTVDADELFSDLK 81
V +S A+ P +S P SS ++ ++ + ++Q + S ++E ST+D + +D
Sbjct: 239 VDTSEMEAVQENPEPASEPIISSFTAKIEQATQPEIVQEKQSKAQEDSTLDPKDPVTDYP 298
Query: 82 EKWDAVENKSTVL 94
EN+S VL
Sbjct: 299 VMGGEQENESYVL 311
>sp|P11927|KAR1_YEAST Cell division control protein KAR1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KAR1 PE=1 SV=2
Length = 433
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 9 VLTPRVPSTTTVKVKSSHCFALPCLPPRSSTPPFSSSIKQVSESRRFPLLQVRASSSEET 68
VL R P K K SH P + +SS+ SS+ + + PL + + +S+ T
Sbjct: 168 VLNTRNP-----KSKESHIKVKPIINNKSSSQRKSSAALRKQLGKPLPLPYLNSPNSDST 222
Query: 69 STVD-ADELFSD--LKEKWDAVENKSTVLLYGGGAIVAVWLSS 108
T+ +E+F+D L++K + +E+K LL+ +V L S
Sbjct: 223 PTLQRKEEVFTDEVLQKKRELIESKWHRLLFHDKKMVEKKLES 265
>sp|P16320|NOF_DROME 120.7 kDa protein in NOF-FB transposable element OS=Drosophila
melanogaster GN=NOF PE=4 SV=2
Length = 1056
Score = 30.0 bits (66), Expect = 6.6, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 90 KSTVLLYGGGAIVAVWLSSTIVGAINSVPLLPKLLELIGLGYTGWFVYRYLL 141
K +L+ GG++ VW+ ++ N+ P L+E++ Y F Y+ LL
Sbjct: 770 KQDEILHNGGSMGPVWIGKQLLQFKNTCP-FDSLVEILSTAYIDNFYYKSLL 820
>sp|Q8A9B8|HTPG_BACTN Chaperone protein HtpG OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=htpG
PE=3 SV=1
Length = 681
Score = 29.6 bits (65), Expect = 6.9, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 41 PFSSSIKQVSESRRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYG 97
P + + VS+ R + E+ T + DEL ++L +KWD ++NK + G
Sbjct: 588 PIQTEMNSVSKRRNELKDSQKDKKEEDIPTAEKDEL-NELDKKWDELKNKKEGIFAG 643
>sp|Q55E54|COROB_DICDI Coronin-B OS=Dictyostelium discoideum GN=corB PE=1 SV=1
Length = 962
Score = 29.3 bits (64), Expect = 9.3, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 14 VPSTTTVKVKSSHCFALPCLPPRSSTPPFSSSIKQVSESRRFPLLQVRASSSEETSTVDA 73
+P T + KS FA P +ST P SSI +S + P+L V + S+ D
Sbjct: 344 IPITFNMSRKSKSTFADDLFPNTASTKPSLSSIDWLSGENKQPIL-VSLNPSDNQINNDL 402
Query: 74 DEL 76
D+L
Sbjct: 403 DDL 405
>sp|Q46VW9|MNMG_CUPPJ tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Cupriavidus pinatubonensis (strain JMP134 / LMG 1197)
GN=mnmG PE=3 SV=1
Length = 646
Score = 29.3 bits (64), Expect = 9.8, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 83 KWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVPLLPKLLE 125
+WDA K + + + W++ TI+ A ++VPLL K +E
Sbjct: 463 RWDAFNRKRDAVSRETERLKSTWVNPTILPAEDAVPLLGKPIE 505
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,774,644
Number of Sequences: 539616
Number of extensions: 1908714
Number of successful extensions: 7356
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 7342
Number of HSP's gapped (non-prelim): 36
length of query: 156
length of database: 191,569,459
effective HSP length: 107
effective length of query: 49
effective length of database: 133,830,547
effective search space: 6557696803
effective search space used: 6557696803
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)