Query 031597
Match_columns 156
No_of_seqs 138 out of 183
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 03:43:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031597.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031597hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xkta_ c.69.1.22 (A:) Fatty a 37.6 16 0.0011 23.9 3.6 51 69-119 62-114 (286)
2 d1v54j_ f.23.4.1 (J:) Mitochon 34.8 21 0.0015 22.3 3.6 48 77-138 5-52 (58)
3 d1pjaa_ c.69.1.13 (A:) Palmito 33.4 8.7 0.00063 25.1 1.7 40 70-109 50-89 (268)
4 d2zjre1 d.141.1.1 (E:83-172) R 19.3 5.7 0.00041 26.6 -1.5 19 123-141 4-22 (90)
5 d1rl6a2 d.141.1.1 (A:82-170) R 17.2 6.4 0.00047 26.3 -1.6 12 123-134 4-15 (89)
6 d1i5pa3 f.1.3.1 (A:1-263) delt 16.7 61 0.0044 24.5 3.9 52 74-132 32-83 (263)
7 d2j01h2 d.141.1.1 (H:83-171) R 13.2 9.5 0.00069 25.4 -1.6 18 123-140 4-21 (89)
8 d1qrva_ a.21.1.1 (A:) HMG-D {D 10.4 93 0.0068 18.3 2.7 22 70-91 28-49 (73)
9 d1bn7a_ c.69.1.8 (A:) Haloalka 10.1 1.5E+02 0.011 19.3 3.9 83 28-110 30-116 (291)
10 d2qamg2 d.141.1.1 (G:82-176) R 10.0 13 0.00096 25.0 -1.8 18 123-140 4-21 (95)
No 1
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.60 E-value=16 Score=23.91 Aligned_cols=51 Identities=22% Similarity=0.137 Sum_probs=33.8
Q ss_pred CccchhHHHHHHHHHHHhc--ccchhhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 031597 69 STVDADELFSDLKEKWDAV--ENKSTVLLYGGGAIVAVWLSSTIVGAINSVPL 119 (156)
Q Consensus 69 ss~~~~Ei~~~l~e~Wd~~--e~k~~vl~~g~gaival~v~~~vl~AId~iPL 119 (156)
.+.+.+|+..++-+...+. +.++.++|.-.|+.|++.+..-.-+.+.++.+
T Consensus 62 ~~~~~~~~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~ 114 (286)
T d1xkta_ 62 PLDSIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPT 114 (286)
T ss_dssp CCSCHHHHHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHHHHC------
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHHHHcCCCcee
Confidence 4456778888777777766 34777888889999999988766565544433
No 2
>d1v54j_ f.23.4.1 (J:) Mitochondrial cytochrome c oxidase subunit VIIa {Cow (Bos taurus) [TaxId: 9913]}
Probab=34.78 E-value=21 Score=22.32 Aligned_cols=48 Identities=13% Similarity=0.076 Sum_probs=29.1
Q ss_pred HHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHhhhheehhhhh
Q 031597 77 FSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVPLLPKLLELIGLGYTGWFVYR 138 (156)
Q Consensus 77 ~~~l~e~Wd~~e~k~~vl~~g~gaival~v~~~vl~AId~iPLlp~llELVGlgyt~WF~yR 138 (156)
+.+.|..++.-++.+--+=.|..=.+-..+..++ -++|++|+.|+.|-
T Consensus 5 v~e~Qk~FQ~~~g~PVhLKGG~~D~~LYr~Tm~L--------------~~~G~~~s~~~l~~ 52 (58)
T d1v54j_ 5 VAEKQKLFQEDNGLPVHLKGGATDNILYRVTMTL--------------CLGGTLYSLYCLGW 52 (58)
T ss_dssp HHHHHHHHHCSSCCCTTTTTCHHHHHHHHHHHHH--------------HHHHHHHHHHHHHH
T ss_pred hHHHHHHhcCCCCceEEecCCcchHHHHHHHHHH--------------HHHHHHHHHHHHHH
Confidence 3466777777666555444444444444444443 36899999988774
No 3
>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.41 E-value=8.7 Score=25.11 Aligned_cols=40 Identities=13% Similarity=0.091 Sum_probs=32.4
Q ss_pred ccchhHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Q 031597 70 TVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSST 109 (156)
Q Consensus 70 s~~~~Ei~~~l~e~Wd~~e~k~~vl~~g~gaival~v~~~ 109 (156)
..+.+++.+++.+..++..+|..++|.-.|+.+++.++.-
T Consensus 50 ~~~~~~~~~~l~~~l~~l~~~~~lvGhS~GG~ia~~~a~~ 89 (268)
T d1pjaa_ 50 WEQVQGFREAVVPIMAKAPQGVHLICYSQGGLVCRALLSV 89 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEETHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhccCCeEEEEccccHHHHHHHHHHH
Confidence 3456778888888888888888888888999999887654
No 4
>d2zjre1 d.141.1.1 (E:83-172) Ribosomal protein L6 {Deinococcus radiodurans [TaxId: 1299]}
Probab=19.25 E-value=5.7 Score=26.65 Aligned_cols=19 Identities=32% Similarity=0.401 Sum_probs=12.9
Q ss_pred HHHHHhhhheehhhhhhhc
Q 031597 123 LLELIGLGYTGWFVYRYLL 141 (156)
Q Consensus 123 llELVGlgyt~WF~yRyLl 141 (156)
-|||+|+||=+-.--++|.
T Consensus 4 ~L~lvGVGYra~~~g~~L~ 22 (90)
T d2zjre1 4 NLELRGVGFRAKLTGKALE 22 (90)
T ss_dssp EEECBSTTCCCCCBTTBCB
T ss_pred EEEEEEEEEEEEecCCEEE
Confidence 3799999997654444443
No 5
>d1rl6a2 d.141.1.1 (A:82-170) Ribosomal protein L6 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=17.16 E-value=6.4 Score=26.30 Aligned_cols=12 Identities=50% Similarity=0.924 Sum_probs=9.4
Q ss_pred HHHHHhhhheeh
Q 031597 123 LLELIGLGYTGW 134 (156)
Q Consensus 123 llELVGlgyt~W 134 (156)
-|||+|+||=+-
T Consensus 4 ~L~lvGVGYra~ 15 (89)
T d1rl6a2 4 ALELVGVGYRAS 15 (89)
T ss_dssp EEEEESTTCEEE
T ss_pred EEEEEEEEEEEE
Confidence 478999999654
No 6
>d1i5pa3 f.1.3.1 (A:1-263) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]}
Probab=16.66 E-value=61 Score=24.51 Aligned_cols=52 Identities=21% Similarity=0.268 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHhhhhe
Q 031597 74 DELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVPLLPKLLELIGLGYT 132 (156)
Q Consensus 74 ~Ei~~~l~e~Wd~~e~k~~vl~~g~gaival~v~~~vl~AId~iPLlp~llELVGlgyt 132 (156)
+++-|+..| |++.....- ++..+|. +.+.++.++-.+..-+-+-.|+|++|-
T Consensus 32 ~~~~k~w~~-~~~~~~~~~-~~~ivg~-----i~s~l~~~l~~~~~~~ils~l~~~lwP 83 (263)
T d1i5pa3 32 DTIQKEWME-WKRTDHSLY-VAPVVGT-----VSSFLLKKVGSLIGKRILSELWGIIFP 83 (263)
T ss_dssp HHHHHHHHH-HHHHSCCCS-CCTHHHH-----HHHHHHHHHTSTTCCCCHHHHHHHHSG
T ss_pred ccchhhHHH-HHhcCcchh-HHHHHHH-----HHHHHHHhhhhHhHHHHHHHHHHHHcC
Confidence 556666666 776544332 2222222 223333343333333345577787764
No 7
>d2j01h2 d.141.1.1 (H:83-171) Ribosomal protein L6 {Thermus thermophilus [TaxId: 274]}
Probab=13.16 E-value=9.5 Score=25.45 Aligned_cols=18 Identities=39% Similarity=0.547 Sum_probs=13.0
Q ss_pred HHHHHhhhheehhhhhhh
Q 031597 123 LLELIGLGYTGWFVYRYL 140 (156)
Q Consensus 123 llELVGlgyt~WF~yRyL 140 (156)
-|||+|+||=+.---++|
T Consensus 4 ~LelvGVGYra~~~g~~L 21 (89)
T d2j01h2 4 ELLIKGIGYRARLVGRAL 21 (89)
T ss_dssp EECCCSSSCEECCBTTBE
T ss_pred EEEEEEEEEEEEEeCCEE
Confidence 479999999876544444
No 8
>d1qrva_ a.21.1.1 (A:) HMG-D {Drosophila melanogaster [TaxId: 7227]}
Probab=10.39 E-value=93 Score=18.33 Aligned_cols=22 Identities=27% Similarity=0.428 Sum_probs=18.3
Q ss_pred ccchhHHHHHHHHHHHhcccch
Q 031597 70 TVDADELFSDLKEKWDAVENKS 91 (156)
Q Consensus 70 s~~~~Ei~~~l~e~Wd~~e~k~ 91 (156)
..+..||.+.+.+.|...++|-
T Consensus 28 ~~~~~eisk~l~~~Wk~~~eK~ 49 (73)
T d1qrva_ 28 GIKVTEVAKRGGELWRAMKDKS 49 (73)
T ss_dssp TCCHHHHHHHHHHHHHHCSCCH
T ss_pred CCCHHHHHHHHHHHhcChhHHH
Confidence 3567899999999999988764
No 9
>d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]}
Probab=10.08 E-value=1.5e+02 Score=19.29 Aligned_cols=83 Identities=11% Similarity=0.042 Sum_probs=46.3
Q ss_pred ccccCCCCCCCCCCCCCc-cccccccCccceeeeecccC--CCCCccchhHHHHHHHHHHHhccc-chhhHHHHHHHHHH
Q 031597 28 FALPCLPPRSSTPPFSSS-IKQVSESRRFPLLQVRASSS--EETSTVDADELFSDLKEKWDAVEN-KSTVLLYGGGAIVA 103 (156)
Q Consensus 28 ~~lp~lp~R~~~~~~~~~-~~~~~~s~~~~~l~vrass~--~esss~~~~Ei~~~l~e~Wd~~e~-k~~vl~~g~gaiva 103 (156)
+.+.++|+=..+...=.+ +..+...-++..+..+.-+. ......+.++..+++.+.-++++. +..++|.-.|+.++
T Consensus 30 p~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia 109 (291)
T d1bn7a_ 30 TPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALG 109 (291)
T ss_dssp SCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCSCCCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCccccccccccchhHHHHHHhhhhhhhccccccccccccccchh
Confidence 357777763322111011 12333333444445554331 223344677888888888888764 55577777888888
Q ss_pred HHHHHHH
Q 031597 104 VWLSSTI 110 (156)
Q Consensus 104 l~v~~~v 110 (156)
+.+...-
T Consensus 110 ~~~a~~~ 116 (291)
T d1bn7a_ 110 FHWAKRN 116 (291)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 8776543
No 10
>d2qamg2 d.141.1.1 (G:82-176) Ribosomal protein L6 {Escherichia coli [TaxId: 562]}
Probab=10.04 E-value=13 Score=25.02 Aligned_cols=18 Identities=28% Similarity=0.493 Sum_probs=12.6
Q ss_pred HHHHHhhhheehhhhhhh
Q 031597 123 LLELIGLGYTGWFVYRYL 140 (156)
Q Consensus 123 llELVGlgyt~WF~yRyL 140 (156)
-|||+|+||=+..--++|
T Consensus 4 ~L~lvGVGYRa~~~g~~L 21 (95)
T d2qamg2 4 KLQLVGVGYRAAVKGNVI 21 (95)
T ss_dssp CCCBCSSSCCCCCCTTEE
T ss_pred EEEEEeEEEEEEEcCCEE
Confidence 479999999776544443
Done!