BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031598
(156 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255536817|ref|XP_002509475.1| protein with unknown function [Ricinus communis]
gi|223549374|gb|EEF50862.1| protein with unknown function [Ricinus communis]
Length = 206
Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/137 (99%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSRVV
Sbjct: 121 VVLGNKIDVDGGNSRVV 137
>gi|224103431|ref|XP_002313053.1| predicted protein [Populus trichocarpa]
gi|118485510|gb|ABK94609.1| unknown [Populus trichocarpa]
gi|222849461|gb|EEE87008.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/137 (98%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVDGGNSRVV
Sbjct: 121 VVLGNKVDVDGGNSRVV 137
>gi|77745448|gb|ABB02623.1| unknown [Solanum tuberosum]
gi|78191474|gb|ABB29958.1| unknown [Solanum tuberosum]
Length = 206
Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/137 (97%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVDGGNSRVV
Sbjct: 121 VVLGNKVDVDGGNSRVV 137
>gi|356538781|ref|XP_003537879.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Glycine max]
gi|356538783|ref|XP_003537880.1| PREDICTED: ras-related protein Rab7-like isoform 2 [Glycine max]
Length = 206
Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 134/137 (97%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKID+DGGNSRVV
Sbjct: 121 VVIGNKIDIDGGNSRVV 137
>gi|449465391|ref|XP_004150411.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|449508065|ref|XP_004163207.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|34484308|gb|AAQ72787.1| putative GTP-binding protein [Cucumis sativus]
Length = 206
Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/137 (98%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVDGGNSRVV
Sbjct: 121 VVLGNKVDVDGGNSRVV 137
>gi|408784807|gb|AFU91386.1| small GTP binding protein [Arachis hypogaea]
Length = 206
Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 133/137 (97%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNK+D+DGGNSRVV
Sbjct: 121 VVIGNKVDIDGGNSRVV 137
>gi|351726788|ref|NP_001238418.1| uncharacterized protein LOC100305642 [Glycine max]
gi|255626165|gb|ACU13427.1| unknown [Glycine max]
Length = 206
Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 134/137 (97%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKID+DGGNSRVV
Sbjct: 121 VVIGNKIDIDGGNSRVV 137
>gi|224080323|ref|XP_002306097.1| predicted protein [Populus trichocarpa]
gi|118481635|gb|ABK92759.1| unknown [Populus trichocarpa]
gi|222849061|gb|EEE86608.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 134/137 (97%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFD+LNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDHLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVDGGNSRVV
Sbjct: 121 VVLGNKVDVDGGNSRVV 137
>gi|297741446|emb|CBI32577.3| unnamed protein product [Vitis vinifera]
Length = 253
Score = 281 bits (719), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 134/137 (97%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 48 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 107
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 108 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 167
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVDGGNSRVV
Sbjct: 168 VVLGNKVDVDGGNSRVV 184
>gi|388507798|gb|AFK41965.1| unknown [Lotus japonicus]
Length = 206
Score = 281 bits (718), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 133/137 (97%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKID+DGGNSRVV
Sbjct: 121 VVIGNKIDIDGGNSRVV 137
>gi|1370186|emb|CAA98170.1| RAB7C [Lotus japonicus]
Length = 206
Score = 281 bits (718), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 133/137 (97%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKID+DGGNSRVV
Sbjct: 121 VVIGNKIDIDGGNSRVV 137
>gi|357473205|ref|XP_003606887.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355507942|gb|AES89084.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 206
Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/137 (97%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQA+PSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQANPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKID+DGGNSRVV
Sbjct: 121 VVIGNKIDIDGGNSRVV 137
>gi|359475302|ref|XP_003631644.1| PREDICTED: ras-related protein Rab7-like [Vitis vinifera]
gi|147783576|emb|CAN61313.1| hypothetical protein VITISV_013388 [Vitis vinifera]
Length = 206
Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/137 (97%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVDGGNSRVV
Sbjct: 121 VVLGNKVDVDGGNSRVV 137
>gi|297830542|ref|XP_002883153.1| hypothetical protein ARALYDRAFT_898258 [Arabidopsis lyrata subsp.
lyrata]
gi|297328993|gb|EFH59412.1| hypothetical protein ARALYDRAFT_898258 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/137 (96%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V++GNK+DVDGGNSRVV
Sbjct: 121 VLIGNKVDVDGGNSRVV 137
>gi|293332671|ref|NP_001169258.1| uncharacterized protein LOC100383121 [Zea mays]
gi|242088493|ref|XP_002440079.1| hypothetical protein SORBIDRAFT_09g025620 [Sorghum bicolor]
gi|223975857|gb|ACN32116.1| unknown [Zea mays]
gi|241945364|gb|EES18509.1| hypothetical protein SORBIDRAFT_09g025620 [Sorghum bicolor]
gi|413946071|gb|AFW78720.1| hypothetical protein ZEAMMB73_253903 [Zea mays]
gi|414591123|tpg|DAA41694.1| TPA: hypothetical protein ZEAMMB73_061376 [Zea mays]
Length = 206
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/137 (97%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSRVV
Sbjct: 121 VLLGNKVDVDGGNSRVV 137
>gi|3914557|sp|Q40787.1|RAB7_CENCI RecName: Full=Ras-related protein Rab7
gi|1155265|gb|AAA85273.1| possible apospory-associated protein [Cenchrus ciliaris]
Length = 206
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/137 (97%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSRVV
Sbjct: 121 VLLGNKVDVDGGNSRVV 137
>gi|115464893|ref|NP_001056046.1| Os05g0516600 [Oryza sativa Japonica Group]
gi|46575953|gb|AAT01314.1| putative GTP-binding protein Rab7a [Oryza sativa Japonica Group]
gi|113579597|dbj|BAF17960.1| Os05g0516600 [Oryza sativa Japonica Group]
gi|215767238|dbj|BAG99466.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767294|dbj|BAG99522.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632232|gb|EEE64364.1| hypothetical protein OsJ_19205 [Oryza sativa Japonica Group]
Length = 206
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/137 (97%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSRVV
Sbjct: 121 VLLGNKVDVDGGNSRVV 137
>gi|357132966|ref|XP_003568099.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 206
Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/137 (97%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSRVV
Sbjct: 121 VLLGNKVDVDGGNSRVV 137
>gi|326494438|dbj|BAJ90488.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/137 (97%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSRVV
Sbjct: 121 VLLGNKVDVDGGNSRVV 137
>gi|217071054|gb|ACJ83887.1| unknown [Medicago truncatula]
gi|388493264|gb|AFK34698.1| unknown [Medicago truncatula]
Length = 206
Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 132/137 (96%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYV+KKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVDKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQA+PSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQANPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKID+DGGNSRVV
Sbjct: 121 VVIGNKIDIDGGNSRVV 137
>gi|357132958|ref|XP_003568095.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 206
Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/137 (97%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSRVV
Sbjct: 121 VLLGNKVDVDGGNSRVV 137
>gi|400923|sp|P31022.1|RAB7_PEA RecName: Full=Ras-related protein Rab7
gi|20756|emb|CAA46600.1| RAS-related GTP-binding protein [Pisum sativum]
Length = 206
Score = 278 bits (712), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 132/137 (96%), Positives = 137/137 (100%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS+KSFDNLNNWREEFLIQA+PSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSVKSFDNLNNWREEFLIQANPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKID+DGGNSRVV
Sbjct: 121 VVIGNKIDIDGGNSRVV 137
>gi|194695376|gb|ACF81772.1| unknown [Zea mays]
Length = 214
Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 133/137 (97%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNL+NWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSRVV
Sbjct: 121 VLLGNKVDVDGGNSRVV 137
>gi|388509354|gb|AFK42743.1| unknown [Lotus japonicus]
Length = 206
Score = 278 bits (710), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 132/137 (96%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRR TLLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRGTLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKID+DGGNSRVV
Sbjct: 121 VVIGNKIDIDGGNSRVV 137
>gi|219887285|gb|ACL54017.1| unknown [Zea mays]
gi|413949817|gb|AFW82466.1| hypothetical protein ZEAMMB73_831449 [Zea mays]
Length = 206
Score = 278 bits (710), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 133/137 (97%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNL+NWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSRVV
Sbjct: 121 VLLGNKVDVDGGNSRVV 137
>gi|326505594|dbj|BAJ95468.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326533112|dbj|BAJ93528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 277 bits (709), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 132/137 (96%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ+EDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQYEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+D+DGGNSRVV
Sbjct: 121 VLLGNKVDIDGGNSRVV 137
>gi|15230211|ref|NP_188512.1| Ras-related protein Rab-7A [Arabidopsis thaliana]
gi|75273925|sp|Q9LS94.1|RAG3F_ARATH RecName: Full=Ras-related protein RABG3f; Short=AtRABG3f; AltName:
Full=Ras-related protein Rab71; Short=AtRab71; AltName:
Full=Ras-related protein Rab7B; Short=AtRab7B
gi|9293907|dbj|BAB01810.1| RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|14334928|gb|AAK59641.1| putative GTP binding protein [Arabidopsis thaliana]
gi|15718408|dbj|BAB68371.1| AtRab71 [Arabidopsis thaliana]
gi|16323368|gb|AAL15178.1| putative GTP binding protein [Arabidopsis thaliana]
gi|332642631|gb|AEE76152.1| Ras-related protein Rab-7A [Arabidopsis thaliana]
Length = 206
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/137 (95%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V++GNK+DVD GNSRVV
Sbjct: 121 VLIGNKVDVDDGNSRVV 137
>gi|218197104|gb|EEC79531.1| hypothetical protein OsI_20631 [Oryza sativa Indica Group]
Length = 206
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/137 (97%), Positives = 135/137 (98%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVD GNSRVV
Sbjct: 121 VLLGNKVDVDSGNSRVV 137
>gi|29293694|gb|AAO67728.1| small GTP binding protein [Oryza sativa Indica Group]
Length = 206
Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/137 (96%), Positives = 135/137 (98%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGD+GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDTGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVD GNSRVV
Sbjct: 121 VLLGNKVDVDSGNSRVV 137
>gi|15222098|ref|NP_175355.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
gi|79319588|ref|NP_001031161.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
gi|75215673|sp|Q9XI98.1|RAG3E_ARATH RecName: Full=Ras-related protein RABG3e; Short=AtRABG3e; AltName:
Full=Ras-related protein Rab74; Short=AtRab74
gi|5430767|gb|AAD43167.1|AC007504_22 Putative RAB7 GTP-binding Protein [Arabidopsis thaliana]
gi|15718414|dbj|BAB68374.1| AtRab74 [Arabidopsis thaliana]
gi|28416619|gb|AAO42840.1| At1g49300 [Arabidopsis thaliana]
gi|110743311|dbj|BAE99544.1| hypothetical protein [Arabidopsis thaliana]
gi|332194293|gb|AEE32414.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
gi|332194294|gb|AEE32415.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
Length = 206
Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/137 (95%), Positives = 136/137 (99%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF++LNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKIDVDGG+SRVV
Sbjct: 121 VVIGNKIDVDGGSSRVV 137
>gi|147828269|emb|CAN75406.1| hypothetical protein VITISV_010510 [Vitis vinifera]
Length = 207
Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/137 (96%), Positives = 134/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSRVV
Sbjct: 121 VVLGNKIDVDGGNSRVV 137
>gi|225442589|ref|XP_002284408.1| PREDICTED: ras-related protein Rab7 [Vitis vinifera]
gi|297743251|emb|CBI36118.3| unnamed protein product [Vitis vinifera]
Length = 207
Score = 275 bits (702), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 132/137 (96%), Positives = 134/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSRVV
Sbjct: 121 VVLGNKIDVDGGNSRVV 137
>gi|224073923|ref|XP_002304199.1| predicted protein [Populus trichocarpa]
gi|118481755|gb|ABK92817.1| unknown [Populus trichocarpa]
gi|118489463|gb|ABK96534.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222841631|gb|EEE79178.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/137 (95%), Positives = 134/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDR+FTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRMFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSRVV
Sbjct: 121 VVLGNKIDVDGGNSRVV 137
>gi|116783756|gb|ABK23074.1| unknown [Picea sitchensis]
gi|116792182|gb|ABK26263.1| unknown [Picea sitchensis]
gi|224284728|gb|ACN40095.1| unknown [Picea sitchensis]
gi|224286503|gb|ACN40958.1| unknown [Picea sitchensis]
Length = 206
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/137 (95%), Positives = 135/137 (98%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MSARRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSFDNLNNWR+EFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVLKSFDNLNNWRDEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSRVV
Sbjct: 121 VVLGNKIDVDGGNSRVV 137
>gi|148466386|gb|ABQ65168.1| Rab7 [Prosopis juliflora]
Length = 207
Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/137 (95%), Positives = 134/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLN+WREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSRVV
Sbjct: 121 VVLGNKIDVDGGNSRVV 137
>gi|255549976|ref|XP_002516039.1| protein with unknown function [Ricinus communis]
gi|223544944|gb|EEF46459.1| protein with unknown function [Ricinus communis]
Length = 207
Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/137 (95%), Positives = 134/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFED+LFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDKLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSRVV
Sbjct: 121 VVLGNKIDVDGGNSRVV 137
>gi|351721665|ref|NP_001237217.1| uncharacterized protein LOC100305824 [Glycine max]
gi|356521867|ref|XP_003529572.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
gi|1370188|emb|CAA98171.1| RAB7D [Lotus japonicus]
gi|255626709|gb|ACU13699.1| unknown [Glycine max]
Length = 207
Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/137 (94%), Positives = 134/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLN+WREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSRV+
Sbjct: 121 VVLGNKIDVDGGNSRVI 137
>gi|21536526|gb|AAM60858.1| GTP binding protein, putative [Arabidopsis thaliana]
Length = 206
Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 130/137 (94%), Positives = 135/137 (98%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNN REEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNRREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V++GNK+DVD GNSRVV
Sbjct: 121 VLIGNKVDVDDGNSRVV 137
>gi|116672840|gb|ABK15561.1| small GTPase Rab2 [Capsicum annuum]
Length = 205
Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/137 (94%), Positives = 133/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSG GKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRL+TLQ
Sbjct: 1 MASRRRMLLKVIILGDSGAGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLYTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSRVV
Sbjct: 121 VVLGNKIDVDGGNSRVV 137
>gi|357468399|ref|XP_003604484.1| Ras-related protein Rab7 [Medicago truncatula]
gi|217075638|gb|ACJ86179.1| unknown [Medicago truncatula]
gi|355505539|gb|AES86681.1| Ras-related protein Rab7 [Medicago truncatula]
gi|388494386|gb|AFK35259.1| unknown [Medicago truncatula]
Length = 207
Score = 271 bits (693), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 130/137 (94%), Positives = 134/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLN+WREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNHWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSRVV
Sbjct: 121 VVLGNKIDVDGGNSRVV 137
>gi|3914550|sp|O24461.1|RAB7_PRUAR RecName: Full=Ras-related protein Rab7
gi|2317874|gb|AAB71504.1| Rab7 GTP binding protein [Prunus armeniaca]
Length = 207
Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 130/137 (94%), Positives = 134/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLNNWREEFLIQA+PSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSRVV
Sbjct: 121 VVLGNKIDVDGGNSRVV 137
>gi|7388049|sp|Q9XER8.1|RAB7_GOSHI RecName: Full=Ras-related protein Rab7
gi|4545231|gb|AAD22451.1|AF116243_1 RAS-related GTP-binding protein [Gossypium hirsutum]
Length = 207
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/137 (94%), Positives = 134/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQF+DRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVDGGNSRVV
Sbjct: 121 VVLGNKVDVDGGNSRVV 137
>gi|388520895|gb|AFK48509.1| unknown [Lotus japonicus]
Length = 207
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/137 (94%), Positives = 133/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVII GDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIIFGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLN+WREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSRV+
Sbjct: 121 VVLGNKIDVDGGNSRVI 137
>gi|449448032|ref|XP_004141770.1| PREDICTED: ras-related protein RABG3d-like isoform 1 [Cucumis
sativus]
Length = 206
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/137 (94%), Positives = 133/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQLDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVDGGNSRVV
Sbjct: 121 VVLGNKVDVDGGNSRVV 137
>gi|449491738|ref|XP_004158989.1| PREDICTED: ras-related protein RABG3d-like isoform 1 [Cucumis
sativus]
Length = 206
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/137 (94%), Positives = 133/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQLDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVDGGNSRVV
Sbjct: 121 VVLGNKVDVDGGNSRVV 137
>gi|346467497|gb|AEO33593.1| hypothetical protein [Amblyomma maculatum]
Length = 229
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/134 (96%), Positives = 131/134 (97%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
RRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGAD LTKEVQFEDRLFTLQIWD
Sbjct: 28 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADLLTKEVQFEDRLFTLQIWD 87
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDPDNFPFVVL
Sbjct: 88 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 147
Query: 124 GNKIDVDGGNSRVV 137
GNK+DVDGGNSRVV
Sbjct: 148 GNKVDVDGGNSRVV 161
>gi|224059082|ref|XP_002299707.1| predicted protein [Populus trichocarpa]
gi|222846965|gb|EEE84512.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/137 (93%), Positives = 133/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV FEDRLFTLQ
Sbjct: 1 MATRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVHFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DVN MKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSRVV
Sbjct: 121 VVLGNKIDVDGGNSRVV 137
>gi|168064632|ref|XP_001784264.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
gi|162664184|gb|EDQ50913.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
Length = 206
Score = 267 bits (683), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 127/137 (92%), Positives = 132/137 (96%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q
Sbjct: 1 MSARKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNL NWR+EFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLENWRDEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVDGGNSRVV
Sbjct: 121 VVLGNKVDVDGGNSRVV 137
>gi|357454943|ref|XP_003597752.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355486800|gb|AES68003.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/135 (94%), Positives = 132/135 (97%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQ EDRLFTLQIW
Sbjct: 5 SRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQVEDRLFTLQIW 64
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLN+WREEFLIQASPSDP+NFPFVV
Sbjct: 65 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNHWREEFLIQASPSDPENFPFVV 124
Query: 123 LGNKIDVDGGNSRVV 137
LGNK+DVDGGNSRVV
Sbjct: 125 LGNKVDVDGGNSRVV 139
>gi|623588|gb|AAA74118.1| putative [Nicotiana tabacum]
Length = 206
Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/137 (91%), Positives = 133/137 (97%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+QFEDRL+TLQ
Sbjct: 1 MAARRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEIQFEDRLYTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVY VN MKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYYVNVMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
+VLGNKIDVDGGNSRVV
Sbjct: 121 IVLGNKIDVDGGNSRVV 137
>gi|302784056|ref|XP_002973800.1| rab family GTPase [Selaginella moellendorffii]
gi|302803686|ref|XP_002983596.1| rab family GTPase [Selaginella moellendorffii]
gi|300148839|gb|EFJ15497.1| rab family GTPase [Selaginella moellendorffii]
gi|300158132|gb|EFJ24755.1| rab family GTPase [Selaginella moellendorffii]
Length = 207
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/137 (91%), Positives = 132/137 (96%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+RTLLK IILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q
Sbjct: 1 MASRKRTLLKAIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNL+NWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLDNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
+VLGNK+DVDGGNSRVV
Sbjct: 121 IVLGNKVDVDGGNSRVV 137
>gi|623590|gb|AAA74119.1| putative [Nicotiana tabacum]
Length = 205
Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/137 (93%), Positives = 133/137 (97%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPS +LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSPA-NVLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 60 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 119
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+D+DGGNSRVV
Sbjct: 120 VVLGNKVDIDGGNSRVV 136
>gi|15218194|ref|NP_175638.1| RAB GTPase homolog G3D [Arabidopsis thaliana]
gi|297852978|ref|XP_002894370.1| hypothetical protein ARALYDRAFT_474344 [Arabidopsis lyrata subsp.
lyrata]
gi|75169431|sp|Q9C820.1|RAG3D_ARATH RecName: Full=Ras-related protein RABG3d; Short=AtRABG3d; AltName:
Full=Ras-related protein Rab72; Short=AtRab72
gi|12323132|gb|AAG51552.1|AC037424_17 GTP-binding protein RAB7D, putative; 63624-64923 [Arabidopsis
thaliana]
gi|15718410|dbj|BAB68372.1| AtRab72 [Arabidopsis thaliana]
gi|18389228|gb|AAL67057.1| putative GTP-binding protein RAB7D [Arabidopsis thaliana]
gi|20465885|gb|AAM20047.1| putative GTP-binding protein RAB7D [Arabidopsis thaliana]
gi|297340212|gb|EFH70629.1| hypothetical protein ARALYDRAFT_474344 [Arabidopsis lyrata subsp.
lyrata]
gi|332194656|gb|AEE32777.1| RAB GTPase homolog G3D [Arabidopsis thaliana]
Length = 206
Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/137 (91%), Positives = 131/137 (95%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK DVDGG SRVV
Sbjct: 121 VVLGNKTDVDGGKSRVV 137
>gi|168021899|ref|XP_001763478.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
gi|162685271|gb|EDQ71667.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
Length = 206
Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/137 (91%), Positives = 132/137 (96%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q
Sbjct: 1 MSARKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNL+NWR+EFLIQASPSD +NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLDNWRDEFLIQASPSDQENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVDGGNSRVV
Sbjct: 121 VVLGNKVDVDGGNSRVV 137
>gi|115435424|ref|NP_001042470.1| Os01g0227300 [Oryza sativa Japonica Group]
gi|56784369|dbj|BAD82408.1| putative RAB7D [Oryza sativa Japonica Group]
gi|113532001|dbj|BAF04384.1| Os01g0227300 [Oryza sativa Japonica Group]
gi|215687298|dbj|BAG91885.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765542|dbj|BAG87239.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187795|gb|EEC70222.1| hypothetical protein OsI_00983 [Oryza sativa Indica Group]
gi|222618023|gb|EEE54155.1| hypothetical protein OsJ_00961 [Oryza sativa Japonica Group]
Length = 207
Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/137 (91%), Positives = 130/137 (94%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF+ LN+WREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSR V
Sbjct: 121 VVLGNKIDVDGGNSRTV 137
>gi|3914539|sp|P93267.1|RAB7_MESCR RecName: Full=Ras-related protein Rab7A
gi|1842069|gb|AAB47557.1| Nt-rab7a homolog [Mesembryanthemum crystallinum]
Length = 207
Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/151 (82%), Positives = 137/151 (90%), Gaps = 2/151 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLK+IILGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKE+QFEDRLFTLQ
Sbjct: 1 MASRRRKLLKIIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKELQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVN MKSF++LN WREEFLIQASP+DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLTYDVNVMKSFESLNRWREEFLIQASPADPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVVCFGEEGSSMVCLQR 151
V+LGNKIDVDGG+ RVV E+ + C+ +
Sbjct: 121 VLLGNKIDVDGGSGRVV--SEKKAKAWCMSK 149
>gi|116781281|gb|ABK22035.1| unknown [Picea sitchensis]
gi|116793125|gb|ABK26622.1| unknown [Picea sitchensis]
Length = 206
Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 125/151 (82%), Positives = 138/151 (91%), Gaps = 2/151 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q
Sbjct: 1 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSFDNL+NWR+EFLIQA+P+DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVIKSFDNLDNWRQEFLIQANPTDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVCFGEEGSSMVCLQR 151
VVLGNK DVDGG+SRVV E+ + M C +
Sbjct: 121 VVLGNKTDVDGGHSRVV--SEKKAKMWCAAK 149
>gi|56417345|gb|AAV90623.1| Rab7 [Cenchrus americanus]
Length = 207
Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/137 (89%), Positives = 130/137 (94%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRR LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MATRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF+ LNNWREEFL+QASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNNWREEFLLQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNKIDVDGGNSR +
Sbjct: 121 VLLGNKIDVDGGNSRTI 137
>gi|15233284|ref|NP_188231.1| RAB GTPase-like protein G3C [Arabidopsis thaliana]
gi|75274463|sp|Q9LW76.1|RAG3C_ARATH RecName: Full=Ras-related protein RABG3c; Short=AtRABG3c; AltName:
Full=Ras-related protein Rab73; Short=AtRab73; AltName:
Full=Ras-related protein Rab7D; Short=AtRab7D
gi|9294457|dbj|BAB02676.1| RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|15718412|dbj|BAB68373.1| AtRab73 [Arabidopsis thaliana]
gi|21536921|gb|AAM61253.1| putative RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|30102532|gb|AAP21184.1| At3g16100 [Arabidopsis thaliana]
gi|110735857|dbj|BAE99904.1| putative RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|332642250|gb|AEE75771.1| RAB GTPase-like protein G3C [Arabidopsis thaliana]
Length = 206
Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/137 (90%), Positives = 130/137 (94%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV DVN MKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK DVDGG SRVV
Sbjct: 121 VVLGNKTDVDGGKSRVV 137
>gi|297830192|ref|XP_002882978.1| hypothetical protein ARALYDRAFT_479064 [Arabidopsis lyrata subsp.
lyrata]
gi|297328818|gb|EFH59237.1| hypothetical protein ARALYDRAFT_479064 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/137 (90%), Positives = 130/137 (94%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV DVN MKSF+NLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK DVDGG SRVV
Sbjct: 121 VVLGNKTDVDGGKSRVV 137
>gi|226494367|ref|NP_001150039.1| ras-related protein Rab7 [Zea mays]
gi|195618620|gb|ACG31140.1| ras-related protein Rab7 [Zea mays]
gi|195625594|gb|ACG34627.1| ras-related protein Rab7 [Zea mays]
gi|195636256|gb|ACG37596.1| ras-related protein Rab7 [Zea mays]
gi|223949159|gb|ACN28663.1| unknown [Zea mays]
Length = 207
Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/137 (90%), Positives = 129/137 (94%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRR LLKVIILGDSGVGKTSLMNQYVN +FSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MATRRRMLLKVIILGDSGVGKTSLMNQYVNNRFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF+ LNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVSKSFEKLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDVDGGNSR V
Sbjct: 121 VVLGNKIDVDGGNSRTV 137
>gi|326512278|dbj|BAJ96120.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 207
Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/137 (90%), Positives = 129/137 (94%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN KFSNQYKATIGADFLTKEV+ +DRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVKIDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF+ LNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNKIDVDGGNSR V
Sbjct: 121 VLLGNKIDVDGGNSRTV 137
>gi|357128479|ref|XP_003565900.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 207
Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/137 (90%), Positives = 129/137 (94%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN KFSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF+ LN+WREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNSWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNKIDVDGGNSR V
Sbjct: 121 VLLGNKIDVDGGNSRTV 137
>gi|307106915|gb|EFN55159.1| hypothetical protein CHLNCDRAFT_35566 [Chlorella variabilis]
Length = 207
Score = 257 bits (657), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 121/137 (88%), Positives = 130/137 (94%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+RTLLKVIILGDSGVGKTSLMNQYVNKKFS+QYKATIGADFLTKEVQ +DRL T+Q
Sbjct: 1 MASRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSSQYKATIGADFLTKEVQVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS K+FDNL NWR+EFLIQASPSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKTFDNLENWRDEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DV+GG +R V
Sbjct: 121 VVLGNKVDVEGGKARQV 137
>gi|168034819|ref|XP_001769909.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
gi|162678815|gb|EDQ65269.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
Length = 214
Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/145 (86%), Positives = 132/145 (91%), Gaps = 8/145 (5%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q
Sbjct: 1 MSARKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQ--------ASP 112
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNL+NWR+EFLIQ ASP
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLDNWRDEFLIQATFTLRLTASP 120
Query: 113 SDPDNFPFVVLGNKIDVDGGNSRVV 137
SD +NFPFVVLGNK+DVDGGNSRVV
Sbjct: 121 SDQENFPFVVLGNKVDVDGGNSRVV 145
>gi|357132960|ref|XP_003568096.1| PREDICTED: ras-related protein Rab7-like isoform 2 [Brachypodium
distachyon]
Length = 199
Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/137 (92%), Positives = 129/137 (94%), Gaps = 7/137 (5%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 -------ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 113
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSRVV
Sbjct: 114 VLLGNKVDVDGGNSRVV 130
>gi|255075683|ref|XP_002501516.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226516780|gb|ACO62774.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 206
Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 120/137 (87%), Positives = 129/137 (94%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+RTLLKVIILGDSGVGKTSLMNQYVN+KFS QYKATIGADFLTKEVQ +DRL T+Q
Sbjct: 1 MASRKRTLLKVIILGDSGVGKTSLMNQYVNRKFSKQYKATIGADFLTKEVQVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DVN+ K+FDNL NWR+EFLIQASP+DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVHDVNTAKTFDNLENWRDEFLIQASPNDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK DVDGG SRVV
Sbjct: 121 VVLGNKTDVDGGASRVV 137
>gi|413946072|gb|AFW78721.1| hypothetical protein ZEAMMB73_253903 [Zea mays]
gi|414591124|tpg|DAA41695.1| TPA: hypothetical protein ZEAMMB73_061376 [Zea mays]
Length = 197
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/137 (91%), Positives = 127/137 (92%), Gaps = 9/137 (6%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSG YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSG---------YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 51
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 52 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 111
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSRVV
Sbjct: 112 VLLGNKVDVDGGNSRVV 128
>gi|384253777|gb|EIE27251.1| Rab7/RabG-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 208
Score = 249 bits (635), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/133 (87%), Positives = 128/133 (96%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+RTLLKVIILGDSGVGKTSLMNQYVNKKFS+QYKATIGADFLTKEVQ +DRL T+QIWDT
Sbjct: 7 KRTLLKVIILGDSGVGKTSLMNQYVNKKFSSQYKATIGADFLTKEVQVDDRLVTMQIWDT 66
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERFQSLGVAFYRGADCCVLVYDVNS K+F+NL+NWR+EFLIQASPS+PDNFPFVVLG
Sbjct: 67 AGQERFQSLGVAFYRGADCCVLVYDVNSQKTFENLDNWRDEFLIQASPSNPDNFPFVVLG 126
Query: 125 NKIDVDGGNSRVV 137
NK+D+D G SRVV
Sbjct: 127 NKVDMDEGRSRVV 139
>gi|224062828|ref|XP_002300895.1| predicted protein [Populus trichocarpa]
gi|118486942|gb|ABK95304.1| unknown [Populus trichocarpa]
gi|222842621|gb|EEE80168.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 248 bits (634), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 115/137 (83%), Positives = 127/137 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSTRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN M+SFD L+NW EEFL QA+PSDP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQATPSDPRTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKID+DGGNSRVV
Sbjct: 121 ILLGNKIDIDGGNSRVV 137
>gi|225463105|ref|XP_002264356.1| PREDICTED: ras-related protein Rab7 isoform 1 [Vitis vinifera]
gi|297739360|emb|CBI29350.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 115/137 (83%), Positives = 127/137 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSARRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN M+SFD L+NW EEFL QA+PSDP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPSDPKTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKID+DGGNSRVV
Sbjct: 121 ILLGNKIDIDGGNSRVV 137
>gi|357132968|ref|XP_003568100.1| PREDICTED: ras-related protein Rab7-like isoform 2 [Brachypodium
distachyon]
Length = 196
Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 123/137 (89%), Positives = 126/137 (91%), Gaps = 10/137 (7%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+ SLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
Sbjct: 61 V----------SLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 110
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSRVV
Sbjct: 111 VLLGNKVDVDGGNSRVV 127
>gi|1370182|emb|CAA98168.1| RAB7A [Lotus japonicus]
Length = 205
Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/137 (84%), Positives = 126/137 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW EEFL QA+PSDP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSDPRTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKID+DGGNSRVV
Sbjct: 121 ILLGNKIDIDGGNSRVV 137
>gi|408797124|gb|AFU92144.1| small GTP binding protein [Arachis hypogaea]
Length = 205
Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/137 (85%), Positives = 125/137 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSMRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD+L NW EEFL QA+PSDP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLENWHEEFLKQANPSDPRMFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VLGNKID+DGGNSRVV
Sbjct: 121 TVLGNKIDIDGGNSRVV 137
>gi|217071676|gb|ACJ84198.1| unknown [Medicago truncatula]
Length = 221
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 114/137 (83%), Positives = 126/137 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MALRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW EEFL QA+PS+P FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNK+D+DGGNSRVV
Sbjct: 121 ILLGNKVDIDGGNSRVV 137
>gi|358344498|ref|XP_003636326.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502261|gb|AES83464.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 221
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 114/137 (83%), Positives = 126/137 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MALRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW EEFL QA+PS+P FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNK+D+DGGNSRVV
Sbjct: 121 ILLGNKVDIDGGNSRVV 137
>gi|224085264|ref|XP_002307527.1| predicted protein [Populus trichocarpa]
gi|118487254|gb|ABK95455.1| unknown [Populus trichocarpa]
gi|222856976|gb|EEE94523.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 245 bits (626), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 113/137 (82%), Positives = 125/137 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSG GKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSARRRTLLKVIVLGDSGAGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCC LVYDVN M+SFD L+NW EEFL QA+PSDP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCALVYDVNVMRSFDTLDNWHEEFLKQANPSDPKTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKID+DGGNSRVV
Sbjct: 121 ILLGNKIDIDGGNSRVV 137
>gi|623592|gb|AAA74120.1| putative [Nicotiana tabacum]
Length = 204
Score = 245 bits (626), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 114/137 (83%), Positives = 126/137 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMN+YV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSMRRRTLLKVIVLGDSGVGKTSLMNRYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN M+SFDNL+NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDNLDNWHEEFLKQANPPDPKTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKID+DGGNSRVV
Sbjct: 121 ILLGNKIDIDGGNSRVV 137
>gi|226500938|ref|NP_001140557.1| uncharacterized protein LOC100272622 [Zea mays]
gi|194689390|gb|ACF78779.1| unknown [Zea mays]
gi|413949816|gb|AFW82465.1| hypothetical protein ZEAMMB73_831449 [Zea mays]
Length = 195
Score = 245 bits (625), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/137 (89%), Positives = 125/137 (91%), Gaps = 11/137 (8%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
SLGVAFYRGADCCVLVYDVNSMKSFDNL+NWREEFLIQASPSDPDNFPF
Sbjct: 61 -----------SLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDPDNFPF 109
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSRVV
Sbjct: 110 VLLGNKVDVDGGNSRVV 126
>gi|356576109|ref|XP_003556176.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
gi|3914559|sp|Q43463.1|RAB7_SOYBN RecName: Full=Ras-related protein Rab7
gi|414834|gb|AAA34004.1| Rab7p [Glycine max]
Length = 206
Score = 244 bits (624), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 115/137 (83%), Positives = 124/137 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKID+DGGNSRVV
Sbjct: 121 ILLGNKIDIDGGNSRVV 137
>gi|358344496|ref|XP_003636325.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502260|gb|AES83463.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 206
Score = 244 bits (624), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 114/137 (83%), Positives = 126/137 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MALRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW EEFL QA+PS+P FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNK+D+DGGNSRVV
Sbjct: 121 ILLGNKVDIDGGNSRVV 137
>gi|351727491|ref|NP_001235371.1| uncharacterized protein LOC100499740 [Glycine max]
gi|255626217|gb|ACU13453.1| unknown [Glycine max]
Length = 206
Score = 244 bits (623), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 115/137 (83%), Positives = 124/137 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKID+DGGNSRVV
Sbjct: 121 ILLGNKIDIDGGNSRVV 137
>gi|255572331|ref|XP_002527104.1| protein with unknown function [Ricinus communis]
gi|223533527|gb|EEF35267.1| protein with unknown function [Ricinus communis]
Length = 205
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/137 (83%), Positives = 125/137 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSVRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN M+SFD L+NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDALDNWHEEFLKQANPPDPKTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKID+DGGNSRVV
Sbjct: 121 ILLGNKIDIDGGNSRVV 137
>gi|115439561|ref|NP_001044060.1| Os01g0714900 [Oryza sativa Japonica Group]
gi|57899823|dbj|BAD87568.1| putative rab7 protein [Oryza sativa Japonica Group]
gi|113533591|dbj|BAF05974.1| Os01g0714900 [Oryza sativa Japonica Group]
gi|215767050|dbj|BAG99278.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 207
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/135 (85%), Positives = 123/135 (91%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVNS +SFD LN W +EFL QASPSDP FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFIL 123
Query: 123 LGNKIDVDGGNSRVV 137
LGNKIDVDGG SRVV
Sbjct: 124 LGNKIDVDGGKSRVV 138
>gi|255647251|gb|ACU24093.1| unknown [Glycine max]
Length = 206
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/137 (83%), Positives = 124/137 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNK+D+DGGNSRVV
Sbjct: 121 ILLGNKVDIDGGNSRVV 137
>gi|303277387|ref|XP_003057987.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460644|gb|EEH57938.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 206
Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/137 (82%), Positives = 128/137 (93%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+RTLLKVIILGDSGVGKTSLMNQYVN+KFS QYKATIGADFLTKEVQ +DRL T+Q
Sbjct: 1 MASRKRTLLKVIILGDSGVGKTSLMNQYVNRKFSKQYKATIGADFLTKEVQVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVN+ K+F+N++NWR+EFLIQA+P+D D+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLTYDVNAGKTFENIDNWRDEFLIQANPADADSFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVD G +RVV
Sbjct: 121 VVLGNKVDVDEGKARVV 137
>gi|242058511|ref|XP_002458401.1| hypothetical protein SORBIDRAFT_03g032810 [Sorghum bicolor]
gi|241930376|gb|EES03521.1| hypothetical protein SORBIDRAFT_03g032810 [Sorghum bicolor]
Length = 206
Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/135 (85%), Positives = 123/135 (91%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVNS +SFD LN W +EFL QASPSDP FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFIL 123
Query: 123 LGNKIDVDGGNSRVV 137
LGNKIDVDGG SRVV
Sbjct: 124 LGNKIDVDGGKSRVV 138
>gi|449444034|ref|XP_004139780.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|449502892|ref|XP_004161772.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
Length = 205
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/137 (83%), Positives = 125/137 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSFRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW +EFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKID+DGGNSRVV
Sbjct: 121 ILLGNKIDIDGGNSRVV 137
>gi|3914558|sp|Q41640.1|RAB7_VIGAC RecName: Full=Ras-related protein Rab7
gi|414842|gb|AAA34242.1| Rab7p [Vigna aconitifolia]
Length = 206
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/137 (82%), Positives = 125/137 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGD+GVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDTGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVN MKSFD L+NW EEFL QA+P DP +FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQANPPDPRSFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKID+DGGNSRVV
Sbjct: 121 ILLGNKIDIDGGNSRVV 137
>gi|223973683|gb|ACN31029.1| unknown [Zea mays]
Length = 206
Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 115/135 (85%), Positives = 122/135 (90%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVA YRGADCCVLVYDVNS +SFD LN W +EFL QASPSDP FPF++
Sbjct: 64 DTAGQERFQSLGVALYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFIL 123
Query: 123 LGNKIDVDGGNSRVV 137
LGNKIDVDGG SRVV
Sbjct: 124 LGNKIDVDGGKSRVV 138
>gi|388492594|gb|AFK34363.1| unknown [Medicago truncatula]
Length = 206
Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 113/137 (82%), Positives = 125/137 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MALRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW EEFL QA+P +P FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPFNPSTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNK+D+DGGNSRVV
Sbjct: 121 ILLGNKVDIDGGNSRVV 137
>gi|255634504|gb|ACU17616.1| unknown [Glycine max]
Length = 206
Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 114/137 (83%), Positives = 123/137 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGAD +TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADSVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKID+DGGNSRVV
Sbjct: 121 ILLGNKIDIDGGNSRVV 137
>gi|326512418|dbj|BAJ99564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 241 bits (614), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 115/135 (85%), Positives = 121/135 (89%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYV+ KFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVN KSFD LN W +EFL QASPSDP FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVNVNKSFDTLNTWHDEFLNQASPSDPKTFPFIL 123
Query: 123 LGNKIDVDGGNSRVV 137
LGNKIDVDGG SRVV
Sbjct: 124 LGNKIDVDGGKSRVV 138
>gi|242055889|ref|XP_002457090.1| hypothetical protein SORBIDRAFT_03g001085 [Sorghum bicolor]
gi|241929065|gb|EES02210.1| hypothetical protein SORBIDRAFT_03g001085 [Sorghum bicolor]
Length = 239
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/130 (87%), Positives = 120/130 (92%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+VI G+ GVGKTSLMNQYVN +FSNQYKATIGADFLTKEVQ +DRLFTLQIWDTAGQ
Sbjct: 40 FLRVIFFGERGVGKTSLMNQYVNNRFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 99
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERFQSLGVAFYRGADCCVLVYDVN KSF+ LNNWREEFLIQASPSDP+NFPFVVLGNKI
Sbjct: 100 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNNWREEFLIQASPSDPENFPFVVLGNKI 159
Query: 128 DVDGGNSRVV 137
DVDGGNSR V
Sbjct: 160 DVDGGNSRTV 169
>gi|15219943|ref|NP_173688.1| Ras-related protein Rab7 [Arabidopsis thaliana]
gi|3914521|sp|O04157.1|RAG3B_ARATH RecName: Full=Ras-related protein RABG3b; Short=AtRABG3b; AltName:
Full=Ras-related protein Rab75; Short=AtRab75
gi|2065015|emb|CAA70951.1| GTP-binding protein Rab7 [Arabidopsis thaliana]
gi|2505866|emb|CAA72904.1| GTP-binding protein Rab7 [Arabidopsis thaliana]
gi|3287684|gb|AAC25512.1| Strong similaity to gb|Y09821 GTP-binding protein Rab7 from A.
thaliana. EST gb|T76449 comes from this gene
[Arabidopsis thaliana]
gi|15718416|dbj|BAB68375.1| AtRab75 [Arabidopsis thaliana]
gi|88193796|gb|ABD42987.1| At1g22740 [Arabidopsis thaliana]
gi|332192158|gb|AEE30279.1| Ras-related protein Rab7 [Arabidopsis thaliana]
Length = 203
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/137 (81%), Positives = 125/137 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVIILGDSGVGKTSLMNQYVN KFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSF++L+NW EFL +ASP DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNK+D+DGGNSRVV
Sbjct: 121 ILLGNKVDIDGGNSRVV 137
>gi|15234026|ref|NP_192710.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|75164695|sp|Q948K8.1|RAG3A_ARATH RecName: Full=Ras-related protein RABG3a; Short=AtRABG3a; AltName:
Full=Ras-related protein Rab76; Short=AtRab76
gi|15718418|dbj|BAB68376.1| AtRab76 [Arabidopsis thaliana]
gi|110738224|dbj|BAF01041.1| AtRab76 [Arabidopsis thaliana]
gi|119360063|gb|ABL66760.1| At4g09720 [Arabidopsis thaliana]
gi|332657383|gb|AEE82783.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 206
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/137 (81%), Positives = 123/137 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q ++L TLQ
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCC LVYDVN ++SFDNL W EEFL QASPSDP FPF
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
+VLGNKIDVDGG+SRVV
Sbjct: 121 IVLGNKIDVDGGSSRVV 137
>gi|218197170|gb|EEC79597.1| hypothetical protein OsI_20781 [Oryza sativa Indica Group]
Length = 206
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/135 (81%), Positives = 122/135 (90%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYVNKKFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCC+LVYDVN+ +SF+ LN W +EFL QASPSDP +FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFIL 123
Query: 123 LGNKIDVDGGNSRVV 137
LGNKID+D GN R +
Sbjct: 124 LGNKIDIDAGNRRAI 138
>gi|297845296|ref|XP_002890529.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336371|gb|EFH66788.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 205
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/137 (83%), Positives = 124/137 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVIILGDSGVGKTSLMNQYVN KFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSIRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSFD+L+NW EFL +ASP DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNYLKSFDSLDNWHAEFLKRASPRDPMAFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNK+DVDGGNSRVV
Sbjct: 121 ILLGNKVDVDGGNSRVV 137
>gi|359495179|ref|XP_003634933.1| PREDICTED: ras-related protein Rab7 isoform 2 [Vitis vinifera]
Length = 216
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/148 (77%), Positives = 127/148 (85%), Gaps = 11/148 (7%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSARRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQ----------- 109
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN M+SFD L+NW EEFL Q
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQVHDAFFIPLFL 120
Query: 110 ASPSDPDNFPFVVLGNKIDVDGGNSRVV 137
A+PSDP FPF++LGNKID+DGGNSRVV
Sbjct: 121 ANPSDPKTFPFILLGNKIDIDGGNSRVV 148
>gi|297809149|ref|XP_002872458.1| AtRABG3a [Arabidopsis lyrata subsp. lyrata]
gi|297318295|gb|EFH48717.1| AtRABG3a [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/137 (81%), Positives = 123/137 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q ++L TLQ
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCC LVYDVN ++SFDNL W EEFL QASPSDP FPF
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
+VLGNK+DVDGG+SRVV
Sbjct: 121 IVLGNKVDVDGGSSRVV 137
>gi|115465131|ref|NP_001056165.1| Os05g0536900 [Oryza sativa Japonica Group]
gi|113579716|dbj|BAF18079.1| Os05g0536900 [Oryza sativa Japonica Group]
gi|215740455|dbj|BAG97111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632372|gb|EEE64504.1| hypothetical protein OsJ_19355 [Oryza sativa Japonica Group]
Length = 206
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/135 (81%), Positives = 122/135 (90%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYVNKKFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCC+LVYDVN+ +SF+ LN W +EFL QASPSDP +FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFIL 123
Query: 123 LGNKIDVDGGNSRVV 137
LGNKID+D GN R +
Sbjct: 124 LGNKIDIDAGNRRAI 138
>gi|357136165|ref|XP_003569676.1| PREDICTED: ras-related protein Rab7-like [Brachypodium distachyon]
Length = 206
Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/135 (84%), Positives = 121/135 (89%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYV+ KFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVN +SFD LN W +EFL QASPSDP FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVNVNRSFDTLNTWHDEFLNQASPSDPKTFPFIL 123
Query: 123 LGNKIDVDGGNSRVV 137
LGNKIDVDGG SRVV
Sbjct: 124 LGNKIDVDGGKSRVV 138
>gi|358344494|ref|XP_003636324.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502259|gb|AES83462.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/140 (81%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQY---VNKKFSNQYKATIGADFLTKEVQFEDRLF 57
M RRRTLLKVI+LGDSGVGKTSLMNQY V+KKFS QYKATIGADF+TKE+Q +DRL
Sbjct: 1 MALRRRTLLKVIVLGDSGVGKTSLMNQYPLYVHKKFSQQYKATIGADFVTKELQIDDRLV 60
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L+NW EEFL QA+PS+P
Sbjct: 61 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPST 120
Query: 118 FPFVVLGNKIDVDGGNSRVV 137
FPF++LGNK+D+DGGNSRVV
Sbjct: 121 FPFILLGNKVDIDGGNSRVV 140
>gi|1370184|emb|CAA98169.1| RAB7B [Lotus japonicus]
Length = 205
Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/137 (80%), Positives = 124/137 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+K+FS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSTRRRTLLKVIVLGDSGVGKTSLMNQYVHKRFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGV+FYRGADCCVLVYDVN M+SFD L+ W EEFL QA+P D FPF
Sbjct: 61 IWDTAGQERFQSLGVSFYRGADCCVLVYDVNVMRSFDTLDTWHEEFLKQANPPDTRTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKID+DGGNSRVV
Sbjct: 121 ILLGNKIDIDGGNSRVV 137
>gi|379134821|gb|AFC93432.1| Ras-like protein [Triticum aestivum]
Length = 206
Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 114/135 (84%), Positives = 120/135 (88%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSGVGKTSLMNQYV+ KFS QYKATIGADF+ KEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVAKEVLIEDRLVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVN KSFD LN W +EFL QASPSDP FPF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVNVNKSFDTLNTWHDEFLNQASPSDPKTFPFIL 123
Query: 123 LGNKIDVDGGNSRVV 137
LGNKIDVDGG SRVV
Sbjct: 124 LGNKIDVDGGKSRVV 138
>gi|358055191|dbj|GAA98960.1| hypothetical protein E5Q_05648 [Mixia osmundae IAM 14324]
Length = 753
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 108/137 (78%), Positives = 125/137 (91%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLK+IILGDSGVGKTSLM Q+VNK+FSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKIIILGDSGVGKTSLMGQFVNKRFSNQYKATIGADFLTKEVMIDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DPD+FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
+VLGNKID++ + RVV
Sbjct: 121 IVLGNKIDME-DSKRVV 136
>gi|388511052|gb|AFK43592.1| unknown [Lotus japonicus]
Length = 205
Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/137 (80%), Positives = 124/137 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+K+FS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSTRRRTLLKVIVLGDSGVGKTSLMNQYVHKRFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGV+FYRGADCCVLVYDVN M+SFD L+ W EEFL QA+P D FPF
Sbjct: 61 IWDTAGQERFQSLGVSFYRGADCCVLVYDVNVMRSFDTLDTWHEEFLKQANPPDTRTFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKID+DGGNSRVV
Sbjct: 121 ILLGNKIDIDGGNSRVV 137
>gi|412985742|emb|CCO16942.1| unknown [Bathycoccus prasinos]
Length = 206
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/138 (81%), Positives = 124/138 (89%), Gaps = 1/138 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR-LFTL 59
M +R+RTLLK+IILGDSGVGKTSLMNQYVN+KFS QYKATIGADFLTKEV+ +D L T+
Sbjct: 1 MSARKRTLLKLIILGDSGVGKTSLMNQYVNRKFSKQYKATIGADFLTKEVKIDDENLVTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ +SF NL NWREEFL QASP+D +NFP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNERSFQNLENWREEFLAQASPADAENFP 120
Query: 120 FVVLGNKIDVDGGNSRVV 137
F+VLGNK D DGG SRVV
Sbjct: 121 FIVLGNKTDQDGGQSRVV 138
>gi|147819924|emb|CAN62813.1| hypothetical protein VITISV_031882 [Vitis vinifera]
Length = 205
Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 109/137 (79%), Positives = 124/137 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + RRTLLKVI+LGDSGVGKTSLMNQYV KKFS QYKATIGADF+TKE+Q +D+L TLQ
Sbjct: 1 MAAPRRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELQIDDKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLG AFYRGADCCVLVYDVN +KSF++L +W EEFL QA P++P+ FPF
Sbjct: 61 LWDTAGQERFQSLGSAFYRGADCCVLVYDVNVLKSFESLQSWHEEFLKQADPAEPEXFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVDGGNSRVV
Sbjct: 121 VVLGNKVDVDGGNSRVV 137
>gi|170084125|ref|XP_001873286.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650838|gb|EDR15078.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 203
Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 110/132 (83%), Positives = 121/132 (91%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KIDV+ G +V
Sbjct: 123 KIDVEEGKRQVT 134
>gi|169844390|ref|XP_001828916.1| RAB small monomeric GTPase [Coprinopsis cinerea okayama7#130]
gi|116510028|gb|EAU92923.1| RAB small monomeric GTPase [Coprinopsis cinerea okayama7#130]
Length = 203
Score = 234 bits (597), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 110/132 (83%), Positives = 121/132 (91%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KIDV+ G +V
Sbjct: 123 KIDVEEGKRQVT 134
>gi|393247992|gb|EJD55499.1| hypothetical protein AURDEDRAFT_50434 [Auricularia delicata
TFB-10046 SS5]
Length = 203
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/132 (83%), Positives = 120/132 (90%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DPDNFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPDNFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KIDV+ +V
Sbjct: 123 KIDVEESKRQVT 134
>gi|225438533|ref|XP_002279477.1| PREDICTED: ras-related protein Rab7 [Vitis vinifera]
gi|296082518|emb|CBI21523.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/137 (79%), Positives = 124/137 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + RRTLLKVI+LGDSGVGKTSLMNQYV KKFS QYKATIGADF+TKE+Q +D+L TLQ
Sbjct: 1 MAAPRRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELQIDDKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLG AFYRGADCCVLVYDVN +KSF++L +W EEFL QA P++P+ FPF
Sbjct: 61 LWDTAGQERFQSLGSAFYRGADCCVLVYDVNVLKSFESLQSWHEEFLKQADPAEPEVFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DVDGGNSRVV
Sbjct: 121 VVLGNKVDVDGGNSRVV 137
>gi|406867361|gb|EKD20399.1| ras-related protein-like protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 205
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/137 (81%), Positives = 124/137 (90%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPD+FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPDSFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDV+ N RV+
Sbjct: 121 VVLGNKIDVE-ENKRVI 136
>gi|409083335|gb|EKM83692.1| hypothetical protein AGABI1DRAFT_81446 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201611|gb|EKV51534.1| hypothetical protein AGABI2DRAFT_133199 [Agaricus bisporus var.
bisporus H97]
Length = 203
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/132 (83%), Positives = 121/132 (91%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KIDV+ G +V
Sbjct: 123 KIDVEEGKRQVT 134
>gi|4538902|emb|CAB39639.1| rab7-like protein [Arabidopsis thaliana]
gi|7267667|emb|CAB78095.1| rab7-like protein [Arabidopsis thaliana]
Length = 208
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/139 (79%), Positives = 122/139 (87%), Gaps = 2/139 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQ--YVNKKFSNQYKATIGADFLTKEVQFEDRLFT 58
M +RRRTLLKVI+LGDSGVGKTSLMN YV+KKFS QYKATIGADF+TKE+Q ++L T
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNHFRYVHKKFSMQYKATIGADFVTKELQIGEKLVT 60
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNF 118
LQIWDTAGQERFQSLG AFYRGADCC LVYDVN ++SFDNL W EEFL QASPSDP F
Sbjct: 61 LQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTF 120
Query: 119 PFVVLGNKIDVDGGNSRVV 137
PF+VLGNKIDVDGG+SRVV
Sbjct: 121 PFIVLGNKIDVDGGSSRVV 139
>gi|281200692|gb|EFA74910.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/137 (79%), Positives = 125/137 (91%), Gaps = 2/137 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++++ LLKVIILGD+GVGKTSLMNQYVNKKFSNQYKATIGADFLTKE+ +DR+ T+Q
Sbjct: 1 MATKKKVLLKVIILGDTGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN K+F+NL++WR+EFLIQA P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKID++ N RVV
Sbjct: 121 VVLGNKIDLE--NQRVV 135
>gi|238584079|ref|XP_002390448.1| hypothetical protein MPER_10266 [Moniliophthora perniciosa FA553]
gi|215453864|gb|EEB91378.1| hypothetical protein MPER_10266 [Moniliophthora perniciosa FA553]
Length = 203
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/132 (82%), Positives = 120/132 (90%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KIDV+ +V
Sbjct: 123 KIDVEENKRQVT 134
>gi|30024664|gb|AAP13582.1|AF407337_1 Ras-related protein Rab7 [Lentinula edodes]
Length = 203
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/132 (82%), Positives = 120/132 (90%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KIDV+ +V
Sbjct: 123 KIDVEENKRQVT 134
>gi|154309394|ref|XP_001554031.1| GTPase Rab7 [Botryotinia fuckeliana B05.10]
gi|156058234|ref|XP_001595040.1| hypothetical protein SS1G_03128 [Sclerotinia sclerotiorum 1980]
gi|154700916|gb|EDO00655.1| hypothetical protein SS1G_03128 [Sclerotinia sclerotiorum 1980
UF-70]
gi|347837376|emb|CCD51948.1| similar to ras-related protein rab-7a [Botryotinia fuckeliana]
Length = 205
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/137 (81%), Positives = 124/137 (90%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDV+ N RV+
Sbjct: 121 VVLGNKIDVE-ENKRVI 136
>gi|409051435|gb|EKM60911.1| hypothetical protein PHACADRAFT_247132 [Phanerochaete carnosa
HHB-10118-sp]
Length = 203
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/131 (83%), Positives = 120/131 (91%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRV 136
KIDV+ +V
Sbjct: 123 KIDVEESKRQV 133
>gi|302694835|ref|XP_003037096.1| hypothetical protein SCHCODRAFT_72805 [Schizophyllum commune H4-8]
gi|300110793|gb|EFJ02194.1| hypothetical protein SCHCODRAFT_72805 [Schizophyllum commune H4-8]
Length = 203
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/132 (82%), Positives = 120/132 (90%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KIDV+ +V
Sbjct: 123 KIDVEENKRQVT 134
>gi|428177507|gb|EKX46386.1| hypothetical protein GUITHDRAFT_152339 [Guillardia theta CCMP2712]
Length = 206
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/137 (80%), Positives = 124/137 (90%), Gaps = 2/137 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSARKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVNVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
WDTAGQERFQSLGVAFYRGADCCVLV+DVN K+F+NL++WR+EFLIQA P DP+NFPF
Sbjct: 61 TWDTAGQERFQSLGVAFYRGADCCVLVFDVNVAKTFENLDSWRDEFLIQAGPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKID++ N RVV
Sbjct: 121 VVLGNKIDLE--NQRVV 135
>gi|223649382|gb|ACN11449.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/130 (83%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|440640707|gb|ELR10626.1| Ras-like protein Rab7 [Geomyces destructans 20631-21]
Length = 205
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/137 (81%), Positives = 124/137 (90%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKIDV+ N R++
Sbjct: 121 VVLGNKIDVE-ENKRMI 136
>gi|392597178|gb|EIW86500.1| hypothetical protein CONPUDRAFT_114884 [Coniophora puteana
RWD-64-598 SS2]
Length = 203
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/132 (82%), Positives = 120/132 (90%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KIDV+ +V
Sbjct: 123 KIDVEENKRQVT 134
>gi|393218537|gb|EJD04025.1| hypothetical protein FOMMEDRAFT_19344 [Fomitiporia mediterranea
MF3/22]
Length = 203
Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/132 (82%), Positives = 120/132 (90%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KIDV+ +V
Sbjct: 123 KIDVEENKRQVT 134
>gi|332022976|gb|EGI63242.1| Ras-related protein Rab-7a [Acromyrmex echinatior]
Length = 207
Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/131 (81%), Positives = 121/131 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV EDR+ T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D++
Sbjct: 121 VVLGNKVDLES 131
>gi|390604173|gb|EIN13564.1| hypothetical protein PUNSTDRAFT_48509 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 203
Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/132 (82%), Positives = 120/132 (90%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KIDV+ +V
Sbjct: 123 KIDVEENKRQVT 134
>gi|307188292|gb|EFN73084.1| Ras-related protein Rab-7a [Camponotus floridanus]
Length = 207
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/131 (81%), Positives = 121/131 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV EDR+ T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D++
Sbjct: 121 VVLGNKVDLES 131
>gi|307204727|gb|EFN83308.1| Ras-related protein Rab-7a [Harpegnathos saltator]
Length = 207
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/131 (81%), Positives = 121/131 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV EDR+ T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D++
Sbjct: 121 VVLGNKVDLES 131
>gi|402218984|gb|EJT99059.1| hypothetical protein DACRYDRAFT_24137 [Dacryopinax sp. DJM-731 SS1]
Length = 202
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 108/131 (82%), Positives = 120/131 (91%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRV 136
K+DV+ +V
Sbjct: 123 KVDVEESKRQV 133
>gi|322792890|gb|EFZ16723.1| hypothetical protein SINV_13124 [Solenopsis invicta]
Length = 209
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 107/131 (81%), Positives = 121/131 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV EDR+ T+Q
Sbjct: 3 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRIVTMQ 62
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 63 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNFPF 122
Query: 121 VVLGNKIDVDG 131
VVLGNK+D++
Sbjct: 123 VVLGNKVDLES 133
>gi|238480271|ref|NP_001154217.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|332657385|gb|AEE82785.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 217
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 112/148 (75%), Positives = 123/148 (83%), Gaps = 11/148 (7%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q ++L TLQ
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQ----------- 109
IWDTAGQERFQSLG AFYRGADCC LVYDVN ++SFDNL W EEFL Q
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMWTIAE 120
Query: 110 ASPSDPDNFPFVVLGNKIDVDGGNSRVV 137
ASPSDP FPF+VLGNKIDVDGG+SRVV
Sbjct: 121 ASPSDPKTFPFIVLGNKIDVDGGSSRVV 148
>gi|47218980|emb|CAG02018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 111/149 (74%), Positives = 128/149 (85%), Gaps = 2/149 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVCFGEEGSSMVCL 149
VVLGNKID++ N +V E ++MV +
Sbjct: 121 VVLGNKIDLE--NRQVSPDEAEPAAMVAV 147
>gi|53830716|gb|AAU95201.1| putative Rab7 [Oncometopia nigricans]
Length = 206
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MATRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV S SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPTSFKDLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|169779179|ref|XP_001824054.1| Ras-related protein Rab7 [Aspergillus oryzae RIB40]
gi|46403855|gb|AAS92973.1| vacuolar biogenesis protein [Aspergillus parasiticus]
gi|46403857|gb|AAS92974.1| vacuolar biogenesis protein [Aspergillus parasiticus]
gi|83772793|dbj|BAE62921.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391874233|gb|EIT83154.1| Ras-related GTPase [Aspergillus oryzae 3.042]
Length = 205
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 108/130 (83%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKIDV+
Sbjct: 121 VVIGNKIDVE 130
>gi|334186419|ref|NP_001190694.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|332657386|gb|AEE82786.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 211
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 111/142 (78%), Positives = 122/142 (85%), Gaps = 5/142 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q ++L TLQ
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQA-----SPSDP 115
IWDTAGQERFQSLG AFYRGADCC LVYDVN ++SFDNL W EEFL QA PSDP
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMCPSDP 120
Query: 116 DNFPFVVLGNKIDVDGGNSRVV 137
FPF+VLGNKIDVDGG+SRVV
Sbjct: 121 KTFPFIVLGNKIDVDGGSSRVV 142
>gi|392571674|gb|EIW64846.1| hypothetical protein TRAVEDRAFT_159540 [Trametes versicolor
FP-101664 SS1]
Length = 203
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 108/132 (81%), Positives = 120/132 (90%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KID++ +V
Sbjct: 123 KIDMEESKRQVT 134
>gi|330801205|ref|XP_003288620.1| hypothetical protein DICPUDRAFT_92126 [Dictyostelium purpureum]
gi|325081347|gb|EGC34866.1| hypothetical protein DICPUDRAFT_92126 [Dictyostelium purpureum]
Length = 203
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 109/137 (79%), Positives = 124/137 (90%), Gaps = 2/137 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE+ +DR+ T+Q
Sbjct: 1 MATKKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVN K+F+NL++WR+EFLIQA P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKID++ N RVV
Sbjct: 121 VVLGNKIDLE--NQRVV 135
>gi|66825113|ref|XP_645911.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548667|sp|P36411.1|RAB7A_DICDI RecName: Full=Ras-related protein Rab-7A
gi|414971|gb|AAA80152.1| Rab7 [Dictyostelium discoideum]
gi|60474031|gb|EAL71968.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 203
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 109/137 (79%), Positives = 124/137 (90%), Gaps = 2/137 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE+ +DR+ T+Q
Sbjct: 1 MATKKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVN K+F+NL++WR+EFLIQA P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKID++ N RVV
Sbjct: 121 VVLGNKIDLE--NQRVV 135
>gi|121713784|ref|XP_001274503.1| Rab small monomeric GTPase Rab7, putative [Aspergillus clavatus
NRRL 1]
gi|119402656|gb|EAW13077.1| Rab small monomeric GTPase Rab7, putative [Aspergillus clavatus
NRRL 1]
Length = 205
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 108/130 (83%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKIDV+
Sbjct: 121 VVIGNKIDVE 130
>gi|395334162|gb|EJF66538.1| hypothetical protein DICSQDRAFT_130795 [Dichomitus squalens
LYAD-421 SS1]
Length = 203
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 108/132 (81%), Positives = 120/132 (90%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KID++ +V
Sbjct: 123 KIDMEESKRQVT 134
>gi|449550712|gb|EMD41676.1| hypothetical protein CERSUDRAFT_79308 [Ceriporiopsis subvermispora
B]
Length = 203
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/131 (82%), Positives = 120/131 (91%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRV 136
KID++ +V
Sbjct: 123 KIDMEENKRQV 133
>gi|407922523|gb|EKG15620.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 205
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/130 (83%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRR+ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRRKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDTLDSWRDEFLIQASPMDPESFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKIDV+
Sbjct: 121 VVIGNKIDVE 130
>gi|159465968|ref|XP_001691181.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500075|sp|Q39573.1|YPTC5_CHLRE RecName: Full=GTP-binding protein YPTC5
gi|806726|gb|AAA82728.1| YptC5 [Chlamydomonas reinhardtii]
gi|158279153|gb|EDP04914.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 206
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/137 (76%), Positives = 124/137 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++R LLKVIILGDSGVGKTSLMNQYV KKF+ +YKATIGADFLTKE++ +D+ T+Q
Sbjct: 1 MSTKKRRLLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCCVLV+DVN+ KSFD+L+NWR+EF+IQA P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQAGPPDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
+VLGNKID +GG+SR V
Sbjct: 121 MVLGNKIDENGGSSRQV 137
>gi|389742197|gb|EIM83384.1| hypothetical protein STEHIDRAFT_123821 [Stereum hirsutum FP-91666
SS1]
Length = 203
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/132 (81%), Positives = 120/132 (90%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KID++ +V
Sbjct: 123 KIDMEENKRQVT 134
>gi|73913048|gb|AAZ91462.1| RAB7 [Hordeum vulgare]
Length = 184
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/137 (78%), Positives = 120/137 (87%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRRTLLKVI+LGDSGVGKTSLMNQYVNKKFS QYKATIGADFLTKEV EDRL TLQ
Sbjct: 1 MAPRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFLTKEVLIEDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ ++F+ L W +EF+ QA PSDP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNAKRTFNTLGTWHDEFINQAGPSDPKQFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
+++GNK+D+D G+ RVV
Sbjct: 121 ILVGNKVDLDSGSRRVV 137
>gi|255582823|ref|XP_002532185.1| protein with unknown function [Ricinus communis]
gi|223528133|gb|EEF30203.1| protein with unknown function [Ricinus communis]
Length = 209
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 119/134 (88%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+RR LLKVI+LGDSGVGKTSLMNQYV KKFS QYKATIGADF+TKE+Q E+++ TLQIWD
Sbjct: 8 KRRALLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELQLEEKVVTLQIWD 67
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLG AFYRGADCCVLVYDVN KSF+ LNNW EEF+ QA P PD FPF++L
Sbjct: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKSFETLNNWHEEFIKQADPIYPDAFPFILL 127
Query: 124 GNKIDVDGGNSRVV 137
GNKID+DGGNSRVV
Sbjct: 128 GNKIDIDGGNSRVV 141
>gi|291510246|gb|ADE10079.1| Rab7 [Tremella fuciformis]
Length = 206
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 121/130 (93%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLT+E+ +DR+ T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTRELVVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L+ WR+EFL+QASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFEALDGWRDEFLVQASPHDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDME 130
>gi|367024323|ref|XP_003661446.1| hypothetical protein MYCTH_2300844 [Myceliophthora thermophila ATCC
42464]
gi|347008714|gb|AEO56201.1| hypothetical protein MYCTH_2300844 [Myceliophthora thermophila ATCC
42464]
Length = 205
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/130 (83%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|209155660|gb|ACI34062.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|449302434|gb|EMC98443.1| hypothetical protein BAUCODRAFT_23209 [Baudoinia compniacensis UAMH
10762]
Length = 205
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/137 (80%), Positives = 123/137 (89%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP+ FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDTLDSWRDEFLIQASPMDPEGFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+DV G + RV+
Sbjct: 121 VVLGNKVDV-GEDKRVI 136
>gi|81251485|gb|ABB70064.1| WSSV receptor Rab7 [Penaeus monodon]
gi|254212147|gb|ACT65737.1| Rab7 [Litopenaeus vannamei]
gi|305693531|gb|ADM66002.1| Rab7 [Penaeus monodon]
Length = 205
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/131 (81%), Positives = 120/131 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKILLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S +F +L++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|333466057|gb|AEF33797.1| Rab7 [Fenneropenaeus chinensis]
Length = 237
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 33 MASRKKILLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 92
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S +F +L++WR+EFLIQASP DPD+FPF
Sbjct: 93 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFPF 152
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 153 VVLGNKIDLE 162
>gi|171692347|ref|XP_001911098.1| hypothetical protein [Podospora anserina S mat+]
gi|170946122|emb|CAP72923.1| unnamed protein product [Podospora anserina S mat+]
Length = 205
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/130 (83%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|452843439|gb|EME45374.1| hypothetical protein DOTSEDRAFT_71187 [Dothistroma septosporum
NZE10]
Length = 205
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+DV+
Sbjct: 121 VVLGNKVDVE 130
>gi|378726191|gb|EHY52650.1| Ras-like protein Rab7 [Exophiala dermatitidis NIH/UT8656]
Length = 205
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/151 (73%), Positives = 129/151 (85%), Gaps = 3/151 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DR+ TLQ
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSTSYKATIGADFLTKEVTVDDRIVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVVCFGEEGSSMVCLQR 151
VV+GNKID+ G R++ ++ + C QR
Sbjct: 121 VVIGNKIDL-GEERRMI--SQKRALAYCQQR 148
>gi|225706886|gb|ACO09289.1| Ras-related protein Rab-7 [Osmerus mordax]
Length = 205
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|429862214|gb|ELA36871.1| rab small monomeric gtpase [Colletotrichum gloeosporioides Nara
gc5]
Length = 205
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/130 (83%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|57524756|ref|NP_001005591.1| uncharacterized protein LOC449549 [Danio rerio]
gi|51895902|gb|AAH82296.1| Zgc:100918 [Danio rerio]
Length = 205
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|218511591|gb|ACK77787.1| RAB7 [Cyprinus carpio]
Length = 204
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|402085554|gb|EJT80452.1| Ras-like protein Rab7 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 205
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/130 (83%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|255954027|ref|XP_002567766.1| Pc21g07250 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589477|emb|CAP95622.1| Pc21g07250 [Penicillium chrysogenum Wisconsin 54-1255]
gi|336289865|gb|AEI31006.1| PcvA [Penicillium chrysogenum]
Length = 205
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/137 (79%), Positives = 124/137 (90%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKIDV+ N R++
Sbjct: 121 VVIGNKIDVE-ENKRMI 136
>gi|225718862|gb|ACO15277.1| Ras-related protein Rab-7a [Caligus clemensi]
gi|225719168|gb|ACO15430.1| Ras-related protein Rab-7a [Caligus clemensi]
Length = 205
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +D+L T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDQLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDV SF +L +WR+EFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCYDVTDTNSFSSLESWRDEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D++
Sbjct: 121 VVLGNKVDLEN 131
>gi|119478910|ref|XP_001259484.1| Rab small monomeric GTPase Rab7, putative [Neosartorya fischeri
NRRL 181]
gi|119407638|gb|EAW17587.1| Rab small monomeric GTPase Rab7, putative [Neosartorya fischeri
NRRL 181]
Length = 205
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKIDV+
Sbjct: 121 VVIGNKIDVE 130
>gi|209150114|gb|ACI33008.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKILLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|425772158|gb|EKV10572.1| Rab small monomeric GTPase Rab7, putative [Penicillium digitatum
Pd1]
gi|425777445|gb|EKV15619.1| Rab small monomeric GTPase Rab7, putative [Penicillium digitatum
PHI26]
Length = 205
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/137 (79%), Positives = 123/137 (89%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP+ FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPETFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKIDV+ N R++
Sbjct: 121 VVIGNKIDVE-ENKRMI 136
>gi|296415700|ref|XP_002837524.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633396|emb|CAZ81715.1| unnamed protein product [Tuber melanosporum]
Length = 205
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MATKKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPD+FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPDSFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|357132794|ref|XP_003568013.1| PREDICTED: ras-related protein Rab7-like [Brachypodium distachyon]
Length = 207
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 119/134 (88%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADFLTKEV EDRL TLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFLTKEVLIEDRLVTLQIWD 64
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVLVYDVN+ +SF+ L W +EF+ QA PSDP +FPF+++
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLVYDVNAKRSFNTLGTWHDEFINQAGPSDPKHFPFILV 124
Query: 124 GNKIDVDGGNSRVV 137
GNK+D D G+ RVV
Sbjct: 125 GNKVDQDAGSRRVV 138
>gi|310792516|gb|EFQ28043.1| Ras family protein [Glomerella graminicola M1.001]
gi|380489971|emb|CCF36344.1| Ras-like protein Rab7 [Colletotrichum higginsianum]
Length = 205
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/130 (83%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|198423784|ref|XP_002128753.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 206
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/139 (79%), Positives = 124/139 (89%), Gaps = 3/139 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTMPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVVCF 139
VV+GNKID++ +RVV +
Sbjct: 121 VVIGNKIDLE---NRVVSY 136
>gi|317037167|ref|XP_001398680.2| Ras-related protein Rab7 [Aspergillus niger CBS 513.88]
gi|350630527|gb|EHA18899.1| hypothetical protein ASPNIDRAFT_54109 [Aspergillus niger ATCC 1015]
Length = 205
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKIDV+
Sbjct: 121 VVIGNKIDVE 130
>gi|328771241|gb|EGF81281.1| hypothetical protein BATDEDRAFT_87536 [Batrachochytrium
dendrobatidis JAM81]
Length = 209
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/135 (78%), Positives = 121/135 (89%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRR+ LLKVIILGDSGVGKTSLMNQYVN KFS QYKATIGADFLTKEV E+R T+QIW
Sbjct: 4 SRRKVLLKVIILGDSGVGKTSLMNQYVNSKFSTQYKATIGADFLTKEVMVEERSVTMQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCC LVYDVN++KSFDNL++WR+EFL+QA+P DP+NFPFVV
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCALVYDVNNVKSFDNLDSWRDEFLLQANPRDPENFPFVV 123
Query: 123 LGNKIDVDGGNSRVV 137
+GNK+DV+ +V
Sbjct: 124 IGNKVDVEDSKRQVT 138
>gi|148223285|ref|NP_001087006.1| RAB7, member RAS oncogene family [Xenopus laevis]
gi|50414980|gb|AAH77884.1| Rab7-prov protein [Xenopus laevis]
Length = 207
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKF+NQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D++
Sbjct: 121 VVLGNKVDLEN 131
>gi|13027392|ref|NP_076440.1| ras-related protein Rab-7a [Rattus norvegicus]
gi|1710001|sp|P09527.2|RAB7A_RAT RecName: Full=Ras-related protein Rab-7a; AltName: Full=Ras-related
protein BRL-RAS; AltName: Full=Ras-related protein p23
gi|51247924|pdb|1VG0|B Chain B, The Crystal Structures Of The Rep-1 Protein In Complex
With Monoprenylated Rab7 Protein
gi|51247926|pdb|1VG8|A Chain A, Gppnhp-Bound Rab7
gi|51247927|pdb|1VG8|B Chain B, Gppnhp-Bound Rab7
gi|51247928|pdb|1VG8|C Chain C, Gppnhp-Bound Rab7
gi|51247929|pdb|1VG8|D Chain D, Gppnhp-Bound Rab7
gi|9837359|gb|AAG00543.1|AF286535_1 GTP-binding protein RAB7 [Rattus norvegicus]
gi|505565|emb|CAA31053.1| unnamed protein product [Rattus rattus]
gi|47938948|gb|AAH72470.1| RAB7A, member RAS oncogene family [Rattus norvegicus]
gi|71891601|dbj|BAE16999.1| RAB7 [Rattus norvegicus]
gi|71891603|dbj|BAE17000.1| RAB7 [Rattus norvegicus]
gi|149036684|gb|EDL91302.1| RAB7, member RAS oncogene family, isoform CRA_a [Rattus norvegicus]
Length = 207
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|149036685|gb|EDL91303.1| RAB7, member RAS oncogene family, isoform CRA_b [Rattus norvegicus]
Length = 206
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|321465562|gb|EFX76562.1| hypothetical protein DAPPUDRAFT_231190 [Daphnia pulex]
Length = 208
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRR+ LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRRKILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV S SF +L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPTSFKDLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+D++
Sbjct: 121 VVLGNKVDLE 130
>gi|453085622|gb|EMF13665.1| hypothetical protein SEPMUDRAFT_148889 [Mycosphaerella populorum
SO2202]
Length = 205
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKILLKVIILGDSGVGKTSLMNQYVNKKFSQSYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+DV+
Sbjct: 121 VVLGNKVDVE 130
>gi|56118925|ref|NP_001008026.1| RAB7A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|147905326|ref|NP_001083352.1| RAB7A, member RAS oncogene family [Xenopus laevis]
gi|38014729|gb|AAH60401.1| MGC68523 protein [Xenopus laevis]
gi|51704077|gb|AAH80905.1| RAB7A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267364|emb|CAJ82793.1| rab7,member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 207
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 105/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKF+NQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D++
Sbjct: 121 VVLGNKVDLEN 131
>gi|410919497|ref|XP_003973221.1| PREDICTED: ras-related protein Rab-7a-like [Takifugu rubripes]
gi|47229587|emb|CAG06783.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|116206514|ref|XP_001229066.1| hypothetical protein CHGG_02550 [Chaetomium globosum CBS 148.51]
gi|88183147|gb|EAQ90615.1| hypothetical protein CHGG_02550 [Chaetomium globosum CBS 148.51]
Length = 205
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSKKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRRVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|34147513|ref|NP_004628.4| ras-related protein Rab-7a [Homo sapiens]
gi|148747526|ref|NP_033031.2| ras-related protein Rab-7a [Mus musculus]
gi|126336249|ref|XP_001366922.1| PREDICTED: ras-related protein Rab-7a-like [Monodelphis domestica]
gi|296225983|ref|XP_002758722.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Callithrix
jacchus]
gi|296225985|ref|XP_002758723.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Callithrix
jacchus]
gi|301764537|ref|XP_002917684.1| PREDICTED: ras-related protein Rab-7a-like [Ailuropoda melanoleuca]
gi|332261783|ref|XP_003279946.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Nomascus
leucogenys]
gi|332817831|ref|XP_526302.3| PREDICTED: ras-related protein Rab-7a isoform 3 [Pan troglodytes]
gi|395516722|ref|XP_003762536.1| PREDICTED: ras-related protein Rab-7a [Sarcophilus harrisii]
gi|395847153|ref|XP_003796248.1| PREDICTED: ras-related protein Rab-7a [Otolemur garnettii]
gi|397518563|ref|XP_003829454.1| PREDICTED: ras-related protein Rab-7a [Pan paniscus]
gi|403268248|ref|XP_003926190.1| PREDICTED: ras-related protein Rab-7a [Saimiri boliviensis
boliviensis]
gi|410037454|ref|XP_003950229.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Pan troglodytes]
gi|410037456|ref|XP_003950230.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Pan troglodytes]
gi|410951826|ref|XP_003982594.1| PREDICTED: ras-related protein Rab-7a-like [Felis catus]
gi|426342010|ref|XP_004036309.1| PREDICTED: ras-related protein Rab-7a-like [Gorilla gorilla
gorilla]
gi|441665150|ref|XP_004091796.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Nomascus
leucogenys]
gi|1709999|sp|P51149.1|RAB7A_HUMAN RecName: Full=Ras-related protein Rab-7a
gi|46397834|sp|P51150.2|RAB7A_MOUSE RecName: Full=Ras-related protein Rab-7a
gi|20379060|gb|AAM21090.1|AF498942_1 small GTP binding protein RAB7 [Homo sapiens]
gi|1089893|emb|CAA63763.1| RAB7 protein [Homo sapiens]
gi|12836622|dbj|BAB23738.1| unnamed protein product [Mus musculus]
gi|13435456|gb|AAH04597.1| RAB7, member RAS oncogene family [Mus musculus]
gi|33870783|gb|AAH08721.2| RAB7A, member RAS oncogene family [Homo sapiens]
gi|56269740|gb|AAH86793.1| RAB7, member RAS oncogene family [Mus musculus]
gi|60688670|gb|AAH13728.2| RAB7A, member RAS oncogene family [Homo sapiens]
gi|71060033|emb|CAJ18560.1| Rab7 [Mus musculus]
gi|74143376|dbj|BAE24180.1| unnamed protein product [Mus musculus]
gi|74178374|dbj|BAE32452.1| unnamed protein product [Mus musculus]
gi|74185227|dbj|BAE30093.1| unnamed protein product [Mus musculus]
gi|74186523|dbj|BAE34750.1| unnamed protein product [Mus musculus]
gi|74195255|dbj|BAE28355.1| unnamed protein product [Mus musculus]
gi|74213341|dbj|BAE35490.1| unnamed protein product [Mus musculus]
gi|74220348|dbj|BAE31401.1| unnamed protein product [Mus musculus]
gi|112292967|dbj|BAF02861.1| Rab7 [Mus musculus]
gi|119599708|gb|EAW79302.1| RAB7, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148666823|gb|EDK99239.1| mCG130610 [Mus musculus]
gi|168277952|dbj|BAG10954.1| Ras-related protein Rab-7a [synthetic construct]
gi|355564540|gb|EHH21040.1| hypothetical protein EGK_04016 [Macaca mulatta]
gi|355786382|gb|EHH66565.1| hypothetical protein EGM_03582 [Macaca fascicularis]
gi|380785041|gb|AFE64396.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380785043|gb|AFE64397.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380816414|gb|AFE80081.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380816416|gb|AFE80082.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383410517|gb|AFH28472.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383410519|gb|AFH28473.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383421483|gb|AFH33955.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383421485|gb|AFH33956.1| ras-related protein Rab-7a [Macaca mulatta]
gi|384949354|gb|AFI38282.1| ras-related protein Rab-7a [Macaca mulatta]
gi|410226154|gb|JAA10296.1| RAB7A, member RAS oncogene family [Pan troglodytes]
gi|410226162|gb|JAA10300.1| RAB7A, member RAS oncogene family [Pan troglodytes]
gi|417397111|gb|JAA45589.1| Putative ras-related protein rab-7a [Desmodus rotundus]
gi|431913713|gb|ELK15203.1| Ras-related protein Rab-7a [Pteropus alecto]
gi|432103477|gb|ELK30581.1| Ras-related protein Rab-7a [Myotis davidii]
gi|444512838|gb|ELV10180.1| Ras-related protein Rab-7a [Tupaia chinensis]
Length = 207
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|197098410|ref|NP_001127416.1| ras-related protein Rab-7a [Pongo abelii]
gi|75070701|sp|Q5R9Y4.1|RAB7A_PONAB RecName: Full=Ras-related protein Rab-7a
gi|55729388|emb|CAH91426.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|327265951|ref|XP_003217771.1| PREDICTED: ras-related protein Rab-7a-like [Anolis carolinensis]
gi|387017942|gb|AFJ51089.1| ras-related protein Rab-7a-like [Crotalus adamanteus]
Length = 207
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|50979156|ref|NP_001003316.1| ras-related protein Rab-7a [Canis lupus familiaris]
gi|131797|sp|P18067.1|RAB7A_CANFA RecName: Full=Ras-related protein Rab-7a
gi|164058|gb|AAA30890.1| GTP-binding protein (rab7) [Canis lupus familiaris]
Length = 207
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|51247925|pdb|1VG1|A Chain A, Gdp-bound Rab7
gi|51247931|pdb|1VG9|B Chain B, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247933|pdb|1VG9|D Chain D, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247935|pdb|1VG9|F Chain F, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247937|pdb|1VG9|H Chain H, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
Length = 185
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|348510369|ref|XP_003442718.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
gi|410920241|ref|XP_003973592.1| PREDICTED: ras-related protein Rab-7a-like [Takifugu rubripes]
gi|317419023|emb|CBN81061.1| Ras-related protein Rab-7a [Dicentrarchus labrax]
gi|380706269|gb|AFD97434.1| Rab7 GTPase [Epinephelus coioides]
Length = 207
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|224066111|ref|XP_002198172.1| PREDICTED: ras-related protein Rab-7a [Taeniopygia guttata]
Length = 207
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|189199544|ref|XP_001936109.1| GTP-binding protein yptV5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330921971|ref|XP_003299638.1| hypothetical protein PTT_10680 [Pyrenophora teres f. teres 0-1]
gi|187983208|gb|EDU48696.1| GTP-binding protein yptV5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311326561|gb|EFQ92235.1| hypothetical protein PTT_10680 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFL+QASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKIDV+
Sbjct: 121 VVIGNKIDVE 130
>gi|260799919|ref|XP_002594905.1| hypothetical protein BRAFLDRAFT_289556 [Branchiostoma floridae]
gi|229280143|gb|EEN50916.1| hypothetical protein BRAFLDRAFT_289556 [Branchiostoma floridae]
Length = 205
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV +F +L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTMPNTFKSLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
V+LGNK+D+D
Sbjct: 121 VLLGNKVDLD 130
>gi|398406058|ref|XP_003854495.1| ras-related protein-like protein [Zymoseptoria tritici IPO323]
gi|339474378|gb|EGP89471.1| ras-related protein-like protein [Zymoseptoria tritici IPO323]
Length = 205
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+DV+
Sbjct: 121 VVLGNKVDVE 130
>gi|367037165|ref|XP_003648963.1| hypothetical protein THITE_2107012 [Thielavia terrestris NRRL 8126]
gi|346996224|gb|AEO62627.1| hypothetical protein THITE_2107012 [Thielavia terrestris NRRL 8126]
Length = 205
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLV+DVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|432860022|ref|XP_004069352.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Oryzias
latipes]
gi|432860024|ref|XP_004069353.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Oryzias
latipes]
Length = 206
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|451851944|gb|EMD65242.1| hypothetical protein COCSADRAFT_36566 [Cochliobolus sativus ND90Pr]
gi|451995245|gb|EMD87713.1| hypothetical protein COCHEDRAFT_1023128 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFL+QASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKIDV+
Sbjct: 121 VVIGNKIDVE 130
>gi|354482839|ref|XP_003503603.1| PREDICTED: ras-related protein Rab-7a-like [Cricetulus griseus]
gi|344253367|gb|EGW09471.1| Ras-related protein Rab-7a [Cricetulus griseus]
Length = 207
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|50754381|ref|XP_414359.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Gallus gallus]
gi|326927938|ref|XP_003210144.1| PREDICTED: ras-related protein Rab-7a-like [Meleagris gallopavo]
gi|363738555|ref|XP_003642026.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Gallus gallus]
gi|449276664|gb|EMC85096.1| Ras-related protein Rab-7a [Columba livia]
Length = 207
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|169613615|ref|XP_001800224.1| hypothetical protein SNOG_09938 [Phaeosphaeria nodorum SN15]
gi|111061153|gb|EAT82273.1| hypothetical protein SNOG_09938 [Phaeosphaeria nodorum SN15]
Length = 205
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFL+QASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKIDV+
Sbjct: 121 VVIGNKIDVE 130
>gi|41055538|ref|NP_957222.1| ras-related protein Rab-7a [Danio rerio]
gi|32451664|gb|AAH54602.1| RAB7, member RAS oncogene family [Danio rerio]
gi|160774333|gb|AAI55203.1| Rab7 protein [Danio rerio]
Length = 207
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|1050551|emb|CAA61797.1| rab7 [Mus musculus]
Length = 207
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|302416853|ref|XP_003006258.1| GTP-binding protein ypt7 [Verticillium albo-atrum VaMs.102]
gi|261355674|gb|EEY18102.1| GTP-binding protein ypt7 [Verticillium albo-atrum VaMs.102]
gi|346974303|gb|EGY17755.1| GTP-binding protein YPTC5 [Verticillium dahliae VdLs.17]
Length = 205
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSTRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|384496448|gb|EIE86939.1| vacuolar biogenesis protein [Rhizopus delemar RA 99-880]
Length = 206
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/127 (83%), Positives = 117/127 (92%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+QIWD
Sbjct: 5 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 64
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVL YDVN+ KSF+ L+ WR+EFL+QASP DPD FPFV+L
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLAYDVNNSKSFEALDQWRDEFLVQASPRDPDRFPFVLL 124
Query: 124 GNKIDVD 130
GNKIDV+
Sbjct: 125 GNKIDVE 131
>gi|85103291|ref|XP_961487.1| GTP-binding protein YPTC5 [Neurospora crassa OR74A]
gi|336274761|ref|XP_003352134.1| hypothetical protein SMAC_02569 [Sordaria macrospora k-hell]
gi|30580489|sp|Q9C2L8.1|RAB7_NEUCR RecName: Full=Probable Ras-related protein Rab7
gi|12718294|emb|CAC28856.1| probable GTPase Rab7 protein [Neurospora crassa]
gi|28923033|gb|EAA32251.1| GTP-binding protein YPTC5 [Neurospora crassa OR74A]
gi|336473057|gb|EGO61217.1| hypothetical protein NEUTE1DRAFT_116033 [Neurospora tetrasperma
FGSC 2508]
gi|350293695|gb|EGZ74780.1| putative ras-related protein Rab7 [Neurospora tetrasperma FGSC
2509]
gi|380092213|emb|CCC09989.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDME 130
>gi|392580232|gb|EIW73359.1| hypothetical protein TREMEDRAFT_42329 [Tremella mesenterica DSM
1558]
Length = 206
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 104/130 (80%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLT+E+ +DR+ T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTRELVVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L+ WR+EFL+QASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFEALDGWRDEFLVQASPHDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDME 130
>gi|348551446|ref|XP_003461541.1| PREDICTED: ras-related protein Rab-7a-like [Cavia porcellus]
Length = 207
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|187607630|ref|NP_001119836.1| ras-related protein Rab-7a [Ovis aries]
gi|184191121|gb|ACC76773.1| RAS oncogene family-like 7A [Ovis aries]
gi|385281368|gb|AFI57836.1| ras-related protein Rab-7A [Capra hircus]
Length = 207
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|317575785|ref|NP_001187403.1| ras-related protein rab-7a [Ictalurus punctatus]
gi|308322921|gb|ADO28598.1| ras-related protein rab-7a [Ictalurus punctatus]
Length = 205
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 107/131 (81%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVN KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|156396428|ref|XP_001637395.1| predicted protein [Nematostella vectensis]
gi|156224507|gb|EDO45332.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 118/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV SF L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|167466099|dbj|BAG06944.1| WSDV receptor Rab7 [Marsupenaeus japonicus]
Length = 205
Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGK SLMNQ+VNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKILLKVIILGDSGVGKASLMNQFVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S +F +L++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|396475893|ref|XP_003839885.1| similar to ras-related protein Rab-7a [Leptosphaeria maculans JN3]
gi|312216456|emb|CBX96406.1| similar to ras-related protein Rab-7a [Leptosphaeria maculans JN3]
Length = 205
Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFL+QASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKIDV+
Sbjct: 121 VVIGNKIDVE 130
>gi|156543352|ref|XP_001607917.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Nasonia
vitripennis]
gi|156543354|ref|XP_001607924.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVAAPSTFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+D++
Sbjct: 121 VVLGNKVDLE 130
>gi|432857138|ref|XP_004068548.1| PREDICTED: ras-related protein Rab-7a-like [Oryzias latipes]
Length = 207
Score = 228 bits (580), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|296474622|tpg|DAA16737.1| TPA: ras-related protein Rab-7a [Bos taurus]
gi|440895046|gb|ELR47337.1| Ras-related protein Rab-7a [Bos grunniens mutus]
Length = 207
Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|78045539|ref|NP_001030253.1| ras-related protein Rab-7a [Bos taurus]
gi|108860919|sp|Q3T0F5.1|RAB7A_BOVIN RecName: Full=Ras-related protein Rab-7a
gi|74354082|gb|AAI02416.1| RAB7A, member RAS oncogene family [Bos taurus]
Length = 207
Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|336376735|gb|EGO05070.1| hypothetical protein SERLA73DRAFT_174086 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389693|gb|EGO30836.1| hypothetical protein SERLADRAFT_455120 [Serpula lacrymans var.
lacrymans S7.9]
Length = 203
Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 107/132 (81%), Positives = 119/132 (90%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVVVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP++FPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPESFPFVVLGN 122
Query: 126 KIDVDGGNSRVV 137
KIDV+ +V
Sbjct: 123 KIDVEENKRQVT 134
>gi|344275957|ref|XP_003409777.1| PREDICTED: ras-related protein Rab-7a-like [Loxodonta africana]
Length = 207
Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|212529382|ref|XP_002144848.1| Rab small monomeric GTPase Rab7, putative [Talaromyces marneffei
ATCC 18224]
gi|210074246|gb|EEA28333.1| Rab small monomeric GTPase Rab7, putative [Talaromyces marneffei
ATCC 18224]
Length = 206
Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 108/137 (78%), Positives = 124/137 (90%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKIDV+ N R++
Sbjct: 121 VVIGNKIDVE-ENKRMI 136
>gi|388581470|gb|EIM21778.1| hypothetical protein WALSEDRAFT_32360 [Wallemia sebi CBS 633.66]
Length = 208
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 108/137 (78%), Positives = 123/137 (89%), Gaps = 1/137 (0%)
Query: 1 MPSRRRT-LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTL 59
MP+ ++T LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DR+ T+
Sbjct: 1 MPAPKKTVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVVDDRVVTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFP
Sbjct: 61 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFETLDSWRDEFLIQASPQDPVNFP 120
Query: 120 FVVLGNKIDVDGGNSRV 136
FVVLGNKID++ V
Sbjct: 121 FVVLGNKIDMEDSKRAV 137
>gi|149728225|ref|XP_001488351.1| PREDICTED: ras-related protein Rab-7a-like [Equus caballus]
Length = 207
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|284794146|pdb|3LAW|A Chain A, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794147|pdb|3LAW|B Chain B, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794148|pdb|3LAW|C Chain C, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794149|pdb|3LAW|D Chain D, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794150|pdb|3LAW|E Chain E, Structure Of Gtp-Bound L129f Mutant Rab7
Length = 207
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID +
Sbjct: 121 VVLGNKIDFEN 131
>gi|340904912|gb|EGS17280.1| rab small monomeric GTPase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 205
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLV+DVN+ KSFD L++WR+EFLIQASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|389634909|ref|XP_003715107.1| Ras-like protein Rab7 [Magnaporthe oryzae 70-15]
gi|351647440|gb|EHA55300.1| Ras-like protein Rab7 [Magnaporthe oryzae 70-15]
gi|440475602|gb|ELQ44271.1| GTP-binding protein ypt7 [Magnaporthe oryzae Y34]
gi|440481863|gb|ELQ62400.1| GTP-binding protein ypt7 [Magnaporthe oryzae P131]
Length = 205
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLV+DVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|60729663|pir||JC8006 Rab7 protein - sea anemone (Aiptasia pulchella)
gi|33621866|gb|AAQ23388.1| Rab7 [Aiptasia pulchella]
Length = 205
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 118/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|348507922|ref|XP_003441504.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
Length = 207
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|1174149|gb|AAA86640.1| small GTP binding protein Rab7 [Homo sapiens]
Length = 207
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/131 (79%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFL+QASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLVQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D++
Sbjct: 121 VVLGNKVDLEN 131
>gi|413946251|gb|AFW78900.1| hypothetical protein ZEAMMB73_911919 [Zea mays]
Length = 206
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 119/134 (88%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADFLTKEV DRL TLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVSKKFSQQYKATIGADFLTKEVLIGDRLVTLQIWD 64
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVLVYDVN +SF+ L+ W +EFL QA PSDP FPF+++
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLVYDVNVKRSFNTLDTWHDEFLNQAGPSDPQRFPFILV 124
Query: 124 GNKIDVDGGNSRVV 137
GNKID+DGG+ R+V
Sbjct: 125 GNKIDLDGGSKRMV 138
>gi|19918938|dbj|BAB88682.1| small GTPase AvaA [Emericella nidulans]
gi|259489719|tpe|CBF90222.1| TPA: Small GTPase AvaA [Source:UniProtKB/TrEMBL;Acc:Q8TGD9]
[Aspergillus nidulans FGSC A4]
Length = 205
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ +LKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVMLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKID++
Sbjct: 121 VVIGNKIDME 130
>gi|229367508|gb|ACQ58734.1| Ras-related protein Rab-7a [Anoplopoma fimbria]
Length = 207
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAF+RGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFHRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|242763676|ref|XP_002340622.1| Rab small monomeric GTPase Rab7, putative [Talaromyces stipitatus
ATCC 10500]
gi|218723818|gb|EED23235.1| Rab small monomeric GTPase Rab7, putative [Talaromyces stipitatus
ATCC 10500]
Length = 206
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/137 (78%), Positives = 124/137 (90%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKIDV+ N R++
Sbjct: 121 VVIGNKIDVE-ENKRMI 136
>gi|184186121|ref|NP_001116983.1| rab7 GTPase homolog SUrab7 [Strongylocentrotus purpuratus]
Length = 205
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DR T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRFVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV S SF +L++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPNSFKSLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+D+D
Sbjct: 121 VVLGNKVDLD 130
>gi|119174482|ref|XP_001239602.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303314345|ref|XP_003067181.1| Ras-related protein Rab7, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240106849|gb|EER25036.1| Ras-related protein Rab7, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320037457|gb|EFW19394.1| vacuolar biogenesis protein [Coccidioides posadasii str. Silveira]
gi|392869802|gb|EAS28327.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 205
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/130 (80%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNKK+S YKATIGAD+LTKEV +DRL T+Q
Sbjct: 1 MATRKKVLLKVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+NL++WR+EFLIQA P DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFENLDSWRDEFLIQACPRDPESFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+DVD
Sbjct: 121 VVLGNKVDVD 130
>gi|50345016|ref|NP_001002178.1| ras-related protein rab-7-like [Danio rerio]
gi|49117792|gb|AAH72717.1| Zgc:91909 [Danio rerio]
gi|182888604|gb|AAI63969.1| Zgc:91909 protein [Danio rerio]
Length = 204
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 118/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVN KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQAS SDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID+D
Sbjct: 121 VVLGNKIDLD 130
>gi|296420204|ref|XP_002839665.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635859|emb|CAZ83856.1| unnamed protein product [Tuber melanosporum]
Length = 202
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/134 (81%), Positives = 117/134 (87%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ R+ LKVIILGDSGVGKTSLMNQYVNK FS YKATIGADFLTK+V +DRL TL +W
Sbjct: 2 ATRKKFLKVIILGDSGVGKTSLMNQYVNKVFSVSYKATIGADFLTKDVMVDDRLVTLTLW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFDNLN+WR+EFLIQASP DPD FPFVV
Sbjct: 62 DTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDNLNSWRDEFLIQASPRDPDTFPFVV 121
Query: 123 LGNKIDVDGGNSRV 136
LGNKIDVD RV
Sbjct: 122 LGNKIDVDESKRRV 135
>gi|297825041|ref|XP_002880403.1| hypothetical protein ARALYDRAFT_481052 [Arabidopsis lyrata subsp.
lyrata]
gi|297326242|gb|EFH56662.1| hypothetical protein ARALYDRAFT_481052 [Arabidopsis lyrata subsp.
lyrata]
Length = 211
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/135 (77%), Positives = 120/135 (88%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+ RTLLKVI+LGDSGVGKTSLMNQYV KKF+ QYKATIGADF+TKE+ +++ TLQIW
Sbjct: 4 SKNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKPVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGADCCVLVYDVN++KSF+ LNNW EFL QA+P +PD FPFV+
Sbjct: 64 DTAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPDTFPFVL 123
Query: 123 LGNKIDVDGGNSRVV 137
+GNK DVDGGNSRVV
Sbjct: 124 IGNKTDVDGGNSRVV 138
>gi|209155278|gb|ACI33871.1| Ras-related protein Rab-7a [Salmo salar]
Length = 201
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 54 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 113
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 114 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 173
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 174 VVLGNKIDLE 183
>gi|241752313|ref|XP_002401040.1| RAB-9 and, putative [Ixodes scapularis]
gi|215508295|gb|EEC17749.1| RAB-9 and, putative [Ixodes scapularis]
gi|442759143|gb|JAA71730.1| Hypothetical protein [Ixodes ricinus]
Length = 204
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 117/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILG+SGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV EDRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV SF L +WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPASFKALESWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNK+D+D
Sbjct: 121 VVIGNKVDLD 130
>gi|443722950|gb|ELU11591.1| hypothetical protein CAPTEDRAFT_21782 [Capitella teleta]
Length = 205
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 118/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTVPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKID++
Sbjct: 121 VVIGNKIDLE 130
>gi|320168875|gb|EFW45774.1| ras family protein [Capsaspora owczarzaki ATCC 30864]
Length = 206
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +D+L T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDKLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL +DV + K+F+ L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCFDVTTPKTFETLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|405954307|gb|EKC21785.1| Ras-related protein Rab-7a [Crassostrea gigas]
gi|405961849|gb|EKC27591.1| Ras-related protein Rab-7a [Crassostrea gigas]
Length = 205
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F +L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTMPNTFKSLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKID++
Sbjct: 121 VVIGNKIDLE 130
>gi|240849471|ref|NP_001155484.1| ras-related protein Rab-7-like [Acyrthosiphon pisum]
gi|239791100|dbj|BAH72062.1| ACYPI002607 [Acyrthosiphon pisum]
Length = 209
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDS VGKTSLMNQYVNKKF+NQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MATRKKVLLKVIILGDSSVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV S SF +L+ WR+EFLIQASPSDPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPGSFKSLDGWRDEFLIQASPSDPDHFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+D+D
Sbjct: 121 VVLGNKVDLD 130
>gi|380449163|gb|AFD54570.1| Ras-related protein Rab7 [Litopenaeus vannamei]
Length = 205
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/131 (80%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIJLGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKILLKVIJLGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S +F +L++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDG 131
VVL NKID++
Sbjct: 121 VVLXNKIDLEN 131
>gi|452985489|gb|EME85246.1| hypothetical protein MYCFIDRAFT_61188 [Pseudocercospora fijiensis
CIRAD86]
Length = 205
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/128 (82%), Positives = 118/128 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPF 120
Query: 121 VVLGNKID 128
VVLGNK+D
Sbjct: 121 VVLGNKVD 128
>gi|449681808|ref|XP_002160165.2| PREDICTED: ras-related protein Rab-7a-like [Hydra magnipapillata]
Length = 206
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/128 (82%), Positives = 118/128 (92%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+QIW
Sbjct: 4 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLV+DV + SF L++WR+EFLIQASP DP+NFPFVV
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNSFKTLDSWRDEFLIQASPRDPENFPFVV 123
Query: 123 LGNKIDVD 130
LGNK+D++
Sbjct: 124 LGNKVDLE 131
>gi|240275387|gb|EER38901.1| vacuolar biogenesis protein [Ajellomyces capsulatus H143]
gi|325091228|gb|EGC44538.1| vacuolar biogenesis protein [Ajellomyces capsulatus H88]
Length = 317
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 121/130 (93%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVI+LGDSGVGKTSLMNQYVNKK+S+ YKATIGAD+LTK+V +DRL TLQ
Sbjct: 113 MATRKKLLLKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQ 172
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 173 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDPESFPF 232
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 233 VVLGNKIDVE 242
>gi|308321783|gb|ADO28034.1| ras-related protein rab-7a [Ictalurus furcatus]
Length = 207
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 118/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV EDRL TLQ
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++ R+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPTTFKTLDSGRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
+VLGNKID++
Sbjct: 121 LVLGNKIDLE 130
>gi|237835873|ref|XP_002367234.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211964898|gb|EEB00094.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221506090|gb|EEE31725.1| ehrab7g protein, putative [Toxoplasma gondii VEG]
Length = 432
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/128 (79%), Positives = 119/128 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP +++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK+V +D+ T+Q
Sbjct: 223 MPPKKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTVQ 282
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + KSF++L +W+EEFLIQ+SPSDPD+FPF
Sbjct: 283 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPSDPDSFPF 342
Query: 121 VVLGNKID 128
VV+GNK+D
Sbjct: 343 VVVGNKVD 350
>gi|363807114|ref|NP_001242593.1| uncharacterized protein LOC100787120 [Glycine max]
gi|255645135|gb|ACU23066.1| unknown [Glycine max]
gi|255645145|gb|ACU23071.1| unknown [Glycine max]
Length = 207
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/137 (75%), Positives = 119/137 (86%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
+ R+RTLLK+I+LGDSGVGKTSLMNQYV +KFS QYKATIGADF+TKE+Q +D+L TLQ
Sbjct: 3 ISQRKRTLLKIIVLGDSGVGKTSLMNQYVYRKFSQQYKATIGADFVTKEIQVDDKLVTLQ 62
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF SLG AFYRGADCCVLVYDVN K+FD LNNW +EFL Q +DP+ FPF
Sbjct: 63 IWDTAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDEFLKQGDMNDPEAFPF 122
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSR V
Sbjct: 123 VLLGNKVDVDGGNSRRV 139
>gi|4105819|gb|AAD02565.1| Rab7 [Homo sapiens]
Length = 207
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/131 (80%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFL KEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLIKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|58260438|ref|XP_567629.1| RAB small monomeric GTPase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117371|ref|XP_772912.1| hypothetical protein CNBK2830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321264105|ref|XP_003196770.1| RAB small monomeric GTPase [Cryptococcus gattii WM276]
gi|50255530|gb|EAL18265.1| hypothetical protein CNBK2830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229710|gb|AAW46112.1| RAB small monomeric GTPase, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317463247|gb|ADV24983.1| RAB small monomeric GTPase, putative [Cryptococcus gattii WM276]
Length = 206
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLT+E+ +DR+ T+Q
Sbjct: 1 MATRKKHLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTRELVVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L+ WR+EFL+QASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNKSFEALDGWRDEFLVQASPHDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDME 130
>gi|313212632|emb|CBY36582.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/130 (80%), Positives = 118/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FS+QYKATIGADFLTKEV +DR+ TLQ
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKEVLVDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F +L +WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKSLESWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKID++
Sbjct: 121 VVIGNKIDLE 130
>gi|320593309|gb|EFX05718.1| rab small monomeric GTPase [Grosmannia clavigera kw1407]
Length = 670
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 117/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLK+IILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MASRKKVLLKIIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVPVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLV+DVN+ KSF+ + WR+EFL+QASP DPDNFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFEAIEGWRDEFLVQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|221484856|gb|EEE23146.1| rab9, putative [Toxoplasma gondii GT1]
Length = 432
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/128 (79%), Positives = 119/128 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP +++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK+V +D+ T+Q
Sbjct: 223 MPPKKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTVQ 282
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + KSF++L +W+EEFLIQ+SPSDPD+FPF
Sbjct: 283 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPSDPDSFPF 342
Query: 121 VVLGNKID 128
VV+GNK+D
Sbjct: 343 VVVGNKVD 350
>gi|340368936|ref|XP_003383006.1| PREDICTED: ras-related protein Rab-7a-like [Amphimedon
queenslandica]
Length = 206
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/130 (80%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RR+ LLKVIILGDSGVGKTSLMNQYVNKKF++QYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSARRKVLLKVIILGDSGVGKTSLMNQYVNKKFTSQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTNANTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKID++
Sbjct: 121 VVIGNKIDLE 130
>gi|110777801|ref|XP_001120025.1| PREDICTED: ras-related protein Rab-7a-like [Apis mellifera]
Length = 207
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/130 (80%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S ++ LLKVIILGDSGVGKTSLMNQYV+KKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MASHKKILLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+D++
Sbjct: 121 VVLGNKVDLE 130
>gi|71022857|ref|XP_761658.1| hypothetical protein UM05511.1 [Ustilago maydis 521]
gi|46101135|gb|EAK86368.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Ustilago maydis 521]
gi|343426390|emb|CBQ69920.1| probable GTPase Rab7 protein [Sporisorium reilianum SRZ2]
gi|388858528|emb|CCF47966.1| probable GTPase Rab7 protein [Ustilago hordei]
gi|443898215|dbj|GAC75552.1| NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit [Pseudozyma
antarctica T-34]
Length = 205
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FS+ YKATIGADFLT+EV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSSAYKATIGADFLTREVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCC L YDVN+ KSF+ L++WR+EFLIQA+P DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCCLCYDVNNAKSFETLDSWRDEFLIQAAPHDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|405119344|gb|AFR94117.1| RAB small monomeric GTPase [Cryptococcus neoformans var. grubii
H99]
Length = 206
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLT+E+ +DR+ T+Q
Sbjct: 1 MATRKKHLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTRELVVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L+ WR+EFL+QASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNKSFEALDGWRDEFLVQASPHDPENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDME 130
>gi|328852304|gb|EGG01451.1| hypothetical protein MELLADRAFT_50103 [Melampsora larici-populina
98AG31]
Length = 228
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/157 (71%), Positives = 124/157 (78%), Gaps = 21/157 (13%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE------- 53
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLTKEV E
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVYIESEPSTSQ 60
Query: 54 --------------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNL 99
DR+ T+Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L
Sbjct: 61 QVTSQPQHQPNPNSDRVVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFETL 120
Query: 100 NNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRV 136
++WR+EFLIQASP DPDNFPFVVLGNKIDV+ G +V
Sbjct: 121 DSWRDEFLIQASPRDPDNFPFVVLGNKIDVEEGKRQV 157
>gi|269972626|emb|CBE66893.1| CG5915-PA [Drosophila ananassae]
Length = 207
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MASRKKSLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+D+D
Sbjct: 121 VVLGNKVDLD 130
>gi|357128481|ref|XP_003565901.1| PREDICTED: ras-related protein Rab7-like isoform 2 [Brachypodium
distachyon]
Length = 196
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 113/137 (82%), Positives = 118/137 (86%), Gaps = 11/137 (8%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN KFSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
SLGVAFYRGADCCVLVYDVN KSF+ LN+WREEFLIQASPSDP+NFPF
Sbjct: 61 -----------SLGVAFYRGADCCVLVYDVNVTKSFEKLNSWREEFLIQASPSDPENFPF 109
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNKIDVDGGNSR V
Sbjct: 110 VLLGNKIDVDGGNSRTV 126
>gi|380028118|ref|XP_003697757.1| PREDICTED: ras-related protein Rab-7a-like [Apis florea]
Length = 207
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/130 (80%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S ++ LLKVIILGDSGVGKTSLMNQYV+KKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MASHKKILLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+D++
Sbjct: 121 VVLGNKVDLE 130
>gi|290992188|ref|XP_002678716.1| rab family small GTPase [Naegleria gruberi]
gi|284092330|gb|EFC45972.1| rab family small GTPase [Naegleria gruberi]
Length = 204
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 117/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD CVLV+D K+F+N+N+WR+EFLIQA P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADSCVLVFDATVAKTFENINSWRDEFLIQAGPPDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VV+ NKID+D
Sbjct: 121 VVIANKIDLD 130
>gi|356512758|ref|XP_003525083.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
Length = 207
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/137 (75%), Positives = 119/137 (86%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
+ R+RTLLK+I+LGDSGVGKTSLMNQYV +KFS QYKATIGADF+TKE+Q +D+L TLQ
Sbjct: 3 ISQRKRTLLKIIVLGDSGVGKTSLMNQYVYRKFSQQYKATIGADFVTKEIQVDDKLVTLQ 62
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF S+G AFYRGADCCVLVYDVN K+FD LNNW +EFL Q +DP+ FPF
Sbjct: 63 IWDTAGQERFHSIGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDEFLKQGDMNDPEAFPF 122
Query: 121 VVLGNKIDVDGGNSRVV 137
V+LGNK+DVDGGNSR V
Sbjct: 123 VLLGNKVDVDGGNSRRV 139
>gi|225709764|gb|ACO10728.1| Ras-related protein Rab-7a [Caligus rogercresseyi]
Length = 208
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 118/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSN+YKATIGADFLTKEV +D+L T+Q
Sbjct: 4 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNRYKATIGADFLTKEVMVDDQLVTMQ 63
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDV SF +L +WR+EFLIQASPSDP+NFPF
Sbjct: 64 IWDTAGQERFQSLGVAFYRGADCCVLCYDVTDPTSFMSLESWRDEFLIQASPSDPENFPF 123
Query: 121 VVLGNKIDVD 130
VVLGNK+D++
Sbjct: 124 VVLGNKVDLE 133
>gi|340718262|ref|XP_003397590.1| PREDICTED: ras-related protein Rab-7a-like [Bombus terrestris]
gi|350401790|ref|XP_003486263.1| PREDICTED: ras-related protein Rab-7a-like [Bombus impatiens]
Length = 207
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/131 (79%), Positives = 120/131 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S ++ LLKVIILGDSGVGKTSLMNQYV+KKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MASHKKLLLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D++
Sbjct: 121 VVLGNKVDLES 131
>gi|325190519|emb|CCA25018.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 488
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 99/130 (76%), Positives = 116/130 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LLK+ ILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+ FED+L TLQ
Sbjct: 282 MAHRKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIVFEDKLVTLQ 341
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD C+LVYD+ + K+F L++WR+EFL+QA+P DPD FPF
Sbjct: 342 IWDTAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEFLVQAAPRDPDAFPF 401
Query: 121 VVLGNKIDVD 130
+VLGNK+D D
Sbjct: 402 LVLGNKVDRD 411
>gi|67464143|pdb|1T91|A Chain A, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464144|pdb|1T91|B Chain B, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464145|pdb|1T91|C Chain C, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464146|pdb|1T91|D Chain D, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464282|pdb|1YHN|A Chain A, Structure Basis Of Rilp Recruitment By Rab7
Length = 207
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/131 (80%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAG ERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGLERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|325190518|emb|CCA25017.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 507
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 99/130 (76%), Positives = 116/130 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LLK+ ILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+ FED+L TLQ
Sbjct: 301 MAHRKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIVFEDKLVTLQ 360
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD C+LVYD+ + K+F L++WR+EFL+QA+P DPD FPF
Sbjct: 361 IWDTAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEFLVQAAPRDPDAFPF 420
Query: 121 VVLGNKIDVD 130
+VLGNK+D D
Sbjct: 421 LVLGNKVDRD 430
>gi|59802950|gb|AAX07679.1| ras-related protein-like protein [Magnaporthe grisea]
Length = 205
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 118/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQER QSLGVAFYRGADCCVLV+DVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWDTAGQERIQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|126722751|ref|NP_001075503.1| ras-related protein Rab-7a [Oryctolagus cuniculus]
gi|6685839|sp|O97572.1|RAB7A_RABIT RecName: Full=Ras-related protein Rab-7a
gi|4105817|gb|AAD02564.1| Rab7 [Oryctolagus cuniculus]
Length = 207
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/131 (80%), Positives = 117/131 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSL VAFYRGADCCVLV+DV + +F L++WR EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|312372342|gb|EFR20324.1| hypothetical protein AND_20302 [Anopheles darlingi]
Length = 192
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 117/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVI+LGDS VGKTSLMNQYVNK+FSNQYKATIGADFLTKEV ++R+ T+Q
Sbjct: 1 MASRKKALLKVIVLGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVIDERVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F NL +WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLESWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 121 VVLGNKIDLE 130
>gi|345568482|gb|EGX51376.1| hypothetical protein AOL_s00054g446 [Arthrobotrys oligospora ATCC
24927]
Length = 216
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/145 (75%), Positives = 122/145 (84%), Gaps = 9/145 (6%)
Query: 1 MPSRRRTLLK---------VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ 51
M SR++ LLK VIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV
Sbjct: 1 MSSRKKVLLKNKNSDYKLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVL 60
Query: 52 FEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQAS 111
+DRL T+QIWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQAS
Sbjct: 61 VDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNQKSFETLDSWRDEFLIQAS 120
Query: 112 PSDPDNFPFVVLGNKIDVDGGNSRV 136
P D D+FPFVV+GNKIDVD G +V
Sbjct: 121 PRDADSFPFVVIGNKIDVDDGKRQV 145
>gi|261191069|ref|XP_002621943.1| GTPase Rab7 [Ajellomyces dermatitidis SLH14081]
gi|239590987|gb|EEQ73568.1| GTPase Rab7 [Ajellomyces dermatitidis SLH14081]
gi|239613100|gb|EEQ90087.1| GTPase Rab7 [Ajellomyces dermatitidis ER-3]
gi|327354859|gb|EGE83716.1| vacuolar biogenesis protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 121/130 (93%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVI+LGDSGVGKTSLMNQYVNKK+S+ YKATIGAD+LTK+V +DRL TLQ
Sbjct: 1 MATRKKLLLKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|325190517|emb|CCA25016.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 510
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 99/130 (76%), Positives = 116/130 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LLK+ ILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+ FED+L TLQ
Sbjct: 304 MAHRKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIVFEDKLVTLQ 363
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD C+LVYD+ + K+F L++WR+EFL+QA+P DPD FPF
Sbjct: 364 IWDTAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEFLVQAAPRDPDAFPF 423
Query: 121 VVLGNKIDVD 130
+VLGNK+D D
Sbjct: 424 LVLGNKVDRD 433
>gi|312285796|gb|ADQ64588.1| hypothetical protein [Bactrocera oleae]
Length = 208
Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/131 (79%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+++LLKVIILGDS VGKTSLMNQY+NK+FSNQYKATIGADF TKEV +DR+ T+Q
Sbjct: 1 MATRKKSLLKVIILGDSSVGKTSLMNQYINKRFSNQYKATIGADFCTKEVIADDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S SF NL++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNSFKNLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D+D
Sbjct: 121 VVLGNKVDMDN 131
>gi|46121525|ref|XP_385317.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Gibberella zeae PH-1]
gi|302911601|ref|XP_003050527.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731464|gb|EEU44814.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|342879328|gb|EGU80581.1| hypothetical protein FOXB_08912 [Fusarium oxysporum Fo5176]
gi|408394017|gb|EKJ73273.1| hypothetical protein FPSE_06538 [Fusarium pseudograminearum CS3096]
Length = 205
Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 118/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|225561783|gb|EEH10063.1| GTPase Rab7 [Ajellomyces capsulatus G186AR]
Length = 205
Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 121/130 (93%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVI+LGDSGVGKTSLMNQYVNKK+S+ YKATIGAD+LTK+V +DRL TLQ
Sbjct: 1 MATRKKLLLKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|297263161|ref|XP_001095709.2| PREDICTED: ras-related protein Rab-7a [Macaca mulatta]
Length = 208
Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/131 (80%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S ++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 2 MTSWKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 61
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 62 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 121
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 122 VVLGNKIDLEN 132
>gi|134084262|emb|CAK47293.1| unnamed protein product [Aspergillus niger]
Length = 206
Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/131 (81%), Positives = 120/131 (91%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 61 -IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FP
Sbjct: 61 AIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFP 120
Query: 120 FVVLGNKIDVD 130
FVV+GNKIDV+
Sbjct: 121 FVVIGNKIDVE 131
>gi|114051368|ref|NP_001040368.1| Rab7 [Bombyx mori]
gi|95102652|gb|ABF51264.1| Rab7 [Bombyx mori]
Length = 208
Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 104/130 (80%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F +L +WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
V+LGNK+D+D
Sbjct: 121 VILGNKVDLD 130
>gi|549813|sp|P36864.1|YPTV5_VOLCA RecName: Full=GTP-binding protein yptV5
gi|409168|gb|AAA34254.1| GTP-binding protein [Volvox carteri]
Length = 205
Score = 224 bits (572), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 102/137 (74%), Positives = 122/137 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++R +LK+IILGDSGVGKTSLMNQYV KKF+ +YKATIGADFLTKE++ +D+ T+Q
Sbjct: 1 MSTKKRRVLKIIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCC+LV+DVN+ KSFD+L+NWR+EF+IQA PSDPDNFPF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCMLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNKID G N +V
Sbjct: 121 VVLGNKIDEVGVNRQVT 137
>gi|18399819|ref|NP_565521.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
gi|75206208|sp|Q9SJ11.2|RABG2_ARATH RecName: Full=Ras-related protein RABG2; Short=AtRABG2; AltName:
Full=Ras-related protein Rab77; Short=AtRab77; AltName:
Full=Ras-related protein Rab7a; Short=AtRab7a
gi|15718420|dbj|BAB68377.1| AtRab77 [Arabidopsis thaliana]
gi|20198008|gb|AAD20423.2| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|21537180|gb|AAM61521.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|88193804|gb|ABD42991.1| At2g21880 [Arabidopsis thaliana]
gi|110738854|dbj|BAF01350.1| GTP-binding protein AtRab77 [Arabidopsis thaliana]
gi|330252139|gb|AEC07233.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
Length = 212
Score = 224 bits (572), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 103/134 (76%), Positives = 119/134 (88%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+ RTLLKVI+LGDSGVGKTSLMNQYV KKF+ QYKATIGADF+TKE+ +++ TLQIWD
Sbjct: 5 KNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWD 64
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLG AFYRGADCCVLVYDVN++KSF+ LNNW EFL QA+P +P+ FPFV++
Sbjct: 65 TAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLI 124
Query: 124 GNKIDVDGGNSRVV 137
GNK DVDGGNSRVV
Sbjct: 125 GNKTDVDGGNSRVV 138
>gi|409083334|gb|EKM83691.1| hypothetical protein AGABI1DRAFT_110327 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201612|gb|EKV51535.1| hypothetical protein AGABI2DRAFT_189775 [Agaricus bisporus var.
bisporus H97]
Length = 203
Score = 224 bits (571), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 105/131 (80%), Positives = 118/131 (90%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LKV+ILGDSGVGKTSLMNQYVNK+F+ QYKATIGADFLTKEV +D+ T+Q+WDTA
Sbjct: 3 RVCLKVVILGDSGVGKTSLMNQYVNKRFNTQYKATIGADFLTKEVVVDDKAATMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVN+ KSFD L++WR+EFLIQASP DPDNFPFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNNTKSFDALDSWRDEFLIQASPQDPDNFPFVLLGN 122
Query: 126 KIDVDGGNSRV 136
KIDV+ GN V
Sbjct: 123 KIDVEEGNRPV 133
>gi|430814192|emb|CCJ28537.1| unnamed protein product [Pneumocystis jirovecii]
Length = 205
Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 104/136 (76%), Positives = 119/136 (87%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSG GKTSL+NQYVNKKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGAGKTSLLNQYVNKKFSNQYKATIGADFLTKEVTVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLV+DV + KSF+ L++WR+EF IQASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVFDVTNSKSFETLDSWRDEFFIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRV 136
V LGNKIDV+ V
Sbjct: 121 VCLGNKIDVEESKRTV 136
>gi|427787197|gb|JAA59050.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 204
Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 117/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILG+SGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV SF L +WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPGSFKALESWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNK+D+D
Sbjct: 121 VVIGNKVDLD 130
>gi|195392371|ref|XP_002054831.1| GJ24655 [Drosophila virilis]
gi|194152917|gb|EDW68351.1| GJ24655 [Drosophila virilis]
Length = 207
Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 104/131 (79%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MASRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D+D
Sbjct: 121 VVLGNKVDLDN 131
>gi|357519661|ref|XP_003630119.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355524141|gb|AET04595.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/148 (72%), Positives = 122/148 (82%), Gaps = 2/148 (1%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R+RTLLKVI+LGDSGVGKTSLMNQYV KKFS QYKATIGADF+TKE+ +D+L TLQIWD
Sbjct: 8 RKRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVDDKLVTLQIWD 67
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF SLG AFYRGADCCVLVYDVN K+FD LNNW ++FL QA +PD FPFV+L
Sbjct: 68 TAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDDFLKQADTGNPDAFPFVLL 127
Query: 124 GNKIDVDGGNSRVVCFGEEGSSMVCLQR 151
GNK+DVDGGNSR V E+ + C R
Sbjct: 128 GNKVDVDGGNSRRVT--EKKAREWCASR 153
>gi|295670409|ref|XP_002795752.1| GTP-binding protein ypt7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|225684456|gb|EEH22740.1| GTP-binding protein yptV5 [Paracoccidioides brasiliensis Pb03]
gi|226284837|gb|EEH40403.1| GTP-binding protein ypt7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 205
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 121/130 (93%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVI+LGDSGVGKTSLMNQYVNKK+S+ YKATIGAD+LTK+V +DRL TLQ
Sbjct: 1 MATRKKLLLKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFL+QASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLVQASPRDPESFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|357619225|gb|EHJ71885.1| Rab7 [Danaus plexippus]
Length = 208
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F +L +WR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
V+LGNK+D++
Sbjct: 121 VILGNKVDLE 130
>gi|388497440|gb|AFK36786.1| unknown [Medicago truncatula]
Length = 209
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/148 (72%), Positives = 122/148 (82%), Gaps = 2/148 (1%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R+RTLLKVI+LGDSGVGKTSLMNQYV KKFS QYKATIGADF+TKE+ +D+L TLQIWD
Sbjct: 8 RKRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVDDKLVTLQIWD 67
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF SLG AFYRGADCCVLVYDVN K+FD LNNW ++FL QA +PD FPFV+L
Sbjct: 68 TAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDDFLKQADTGNPDAFPFVLL 127
Query: 124 GNKIDVDGGNSRVVCFGEEGSSMVCLQR 151
GNK+DVDGGNSR V E+ + C R
Sbjct: 128 GNKVDVDGGNSRRVT--EKKAREWCASR 153
>gi|357017283|gb|AET50670.1| hypothetical protein [Eimeria tenella]
Length = 207
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/128 (78%), Positives = 118/128 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP ++++LLKVIILGDS VGKTSLMNQYVNKKFSNQYKATIGADFLTK+V +D+ T+Q
Sbjct: 1 MPPKKKSLLKVIILGDSSVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTIQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + KSFD+L +W++EFLIQ+SP+DPD FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFDSLESWKDEFLIQSSPADPDAFPF 120
Query: 121 VVLGNKID 128
VVLGNK+D
Sbjct: 121 VVLGNKVD 128
>gi|269972612|emb|CBE66886.1| CG5915-PA [Drosophila ananassae]
Length = 207
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/131 (79%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MASRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D+D
Sbjct: 121 VVLGNKVDLDN 131
>gi|195108353|ref|XP_001998757.1| GI24142 [Drosophila mojavensis]
gi|193915351|gb|EDW14218.1| GI24142 [Drosophila mojavensis]
Length = 207
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/131 (78%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MATRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D+D
Sbjct: 121 VVLGNKVDLDN 131
>gi|194742714|ref|XP_001953846.1| GF17031 [Drosophila ananassae]
gi|190626883|gb|EDV42407.1| GF17031 [Drosophila ananassae]
gi|269972614|emb|CBE66887.1| CG5915-PA [Drosophila ananassae]
gi|269972616|emb|CBE66888.1| CG5915-PA [Drosophila ananassae]
gi|269972618|emb|CBE66889.1| CG5915-PA [Drosophila ananassae]
gi|269972620|emb|CBE66890.1| CG5915-PA [Drosophila ananassae]
gi|269972622|emb|CBE66891.1| CG5915-PA [Drosophila ananassae]
gi|269972624|emb|CBE66892.1| CG5915-PA [Drosophila ananassae]
gi|269972628|emb|CBE66894.1| CG5915-PA [Drosophila ananassae]
gi|269972630|emb|CBE66895.1| CG5915-PA [Drosophila ananassae]
gi|269972632|emb|CBE66896.1| CG5915-PA [Drosophila ananassae]
gi|269972634|emb|CBE66897.1| CG5915-PA [Drosophila ananassae]
gi|269973057|emb|CBE67073.1| CG5915-PA [Drosophila phaeopleura]
Length = 207
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/131 (79%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MASRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D+D
Sbjct: 121 VVLGNKVDLDN 131
>gi|402237919|gb|AFQ38857.1| GTP-binding protein Ypt7 [Magnaporthe oryzae]
Length = 205
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 118/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+W+TAGQERFQSLGVAFYRGADCCVLV+DVN+ KSFD L++WR+EFLIQASP DPDNFPF
Sbjct: 61 LWNTAGQERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VVLG KIDV+
Sbjct: 121 VVLGTKIDVE 130
>gi|383858778|ref|XP_003704876.1| PREDICTED: ras-related protein Rab-7a-like [Megachile rotundata]
Length = 207
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/131 (78%), Positives = 121/131 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYV+KKFSNQYKATIGADFL+KEV+ +DR+ T+Q
Sbjct: 1 MASRKKLLLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLSKEVRVDDRIVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ SF +L++WR+EFLIQASP D DNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDQDNFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D++
Sbjct: 121 VVLGNKVDLES 131
>gi|326432764|gb|EGD78334.1| Rab7 GTPase [Salpingoeca sp. ATCC 50818]
Length = 206
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 118/129 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MATRKKVLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVTVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +SF++L WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPRSFESLEAWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDV 129
VVLGNK+D+
Sbjct: 121 VVLGNKVDL 129
>gi|170046123|ref|XP_001850628.1| ras-related protein Rab-7 [Culex quinquefasciatus]
gi|167869001|gb|EDS32384.1| ras-related protein Rab-7 [Culex quinquefasciatus]
Length = 208
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/131 (78%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MATRKKVLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVIDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F NL++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|401413308|ref|XP_003886101.1| hypothetical protein NCLIV_065010 [Neospora caninum Liverpool]
gi|325120521|emb|CBZ56075.1| hypothetical protein NCLIV_065010 [Neospora caninum Liverpool]
Length = 210
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/128 (78%), Positives = 119/128 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP +++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK+V +D+ T+Q
Sbjct: 1 MPPKKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTVQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + KSF++L +W+EEFLIQ+SP+DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPADPDSFPF 120
Query: 121 VVLGNKID 128
VV+GNK+D
Sbjct: 121 VVVGNKVD 128
>gi|346467979|gb|AEO33834.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 116/130 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILG+SGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MSSRKKVLLKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV SF L WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPGSFKALXXWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNK+D+D
Sbjct: 121 VVIGNKVDLD 130
>gi|291388446|ref|XP_002710790.1| PREDICTED: RAB7A, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 207
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/131 (79%), Positives = 117/131 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKF NQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFRNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSL VAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLCVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|289743677|gb|ADD20586.1| Ras-related protein Rab-7 [Glossina morsitans morsitans]
Length = 208
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/131 (78%), Positives = 119/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDS VGKTS+MNQYV+K+FSNQYKATIGADF TKEV +DR+ T+Q
Sbjct: 1 MASRKKSLLKVIILGDSSVGKTSIMNQYVSKRFSNQYKATIGADFCTKEVVLDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D+D
Sbjct: 121 VVLGNKVDMDN 131
>gi|195998137|ref|XP_002108937.1| Rab7 protein [Trichoplax adhaerens]
gi|190589713|gb|EDV29735.1| Rab7 protein [Trichoplax adhaerens]
Length = 205
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 117/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV SF +L+ WR+EFLIQASP D +NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVANSFKSLDGWRDEFLIQASPRDSENFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+D++
Sbjct: 121 VVLGNKVDLE 130
>gi|17865835|ref|NP_524472.1| Rab7, isoform A [Drosophila melanogaster]
gi|386766374|ref|NP_001247276.1| Rab7, isoform B [Drosophila melanogaster]
gi|386766376|ref|NP_001247277.1| Rab7, isoform C [Drosophila melanogaster]
gi|8118580|gb|AAF73041.1|AF263363_1 small ras-like GTPase RAB7 [Drosophila melanogaster]
gi|3426326|gb|AAC32270.1| small ras-like GTPase [Drosophila melanogaster]
gi|6561905|dbj|BAA88245.1| Rab7 protein [Drosophila melanogaster]
gi|7301083|gb|AAF56218.1| Rab7, isoform A [Drosophila melanogaster]
gi|16648020|gb|AAL25275.1| GH03685p [Drosophila melanogaster]
gi|116806766|emb|CAL26809.1| CG5915 [Drosophila melanogaster]
gi|116806768|emb|CAL26810.1| CG5915 [Drosophila melanogaster]
gi|116806770|emb|CAL26811.1| CG5915 [Drosophila melanogaster]
gi|116806772|emb|CAL26812.1| CG5915 [Drosophila melanogaster]
gi|116806774|emb|CAL26813.1| CG5915 [Drosophila melanogaster]
gi|116806776|emb|CAL26814.1| CG5915 [Drosophila melanogaster]
gi|116806778|emb|CAL26815.1| CG5915 [Drosophila melanogaster]
gi|116806780|emb|CAL26816.1| CG5915 [Drosophila melanogaster]
gi|116806782|emb|CAL26817.1| CG5915 [Drosophila melanogaster]
gi|116806784|emb|CAL26818.1| CG5915 [Drosophila melanogaster]
gi|116806786|emb|CAL26819.1| CG5915 [Drosophila melanogaster]
gi|220944908|gb|ACL84997.1| Rab7-PA [synthetic construct]
gi|220954800|gb|ACL89943.1| Rab7-PA [synthetic construct]
gi|223967661|emb|CAR93561.1| CG5915-PA [Drosophila melanogaster]
gi|223967663|emb|CAR93562.1| CG5915-PA [Drosophila melanogaster]
gi|223967665|emb|CAR93563.1| CG5915-PA [Drosophila melanogaster]
gi|223967667|emb|CAR93564.1| CG5915-PA [Drosophila melanogaster]
gi|223967669|emb|CAR93565.1| CG5915-PA [Drosophila melanogaster]
gi|223967671|emb|CAR93566.1| CG5915-PA [Drosophila melanogaster]
gi|223967673|emb|CAR93567.1| CG5915-PA [Drosophila melanogaster]
gi|223967675|emb|CAR93568.1| CG5915-PA [Drosophila melanogaster]
gi|223967677|emb|CAR93569.1| CG5915-PA [Drosophila melanogaster]
gi|223967679|emb|CAR93570.1| CG5915-PA [Drosophila melanogaster]
gi|223967681|emb|CAR93571.1| CG5915-PA [Drosophila melanogaster]
gi|294661911|gb|ADF28796.1| MIP21169p [Drosophila melanogaster]
gi|383292915|gb|AFH06594.1| Rab7, isoform B [Drosophila melanogaster]
gi|383292916|gb|AFH06595.1| Rab7, isoform C [Drosophila melanogaster]
Length = 207
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/130 (80%), Positives = 117/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MSGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+D+D
Sbjct: 121 VVLGNKVDLD 130
>gi|195037102|ref|XP_001990004.1| GH18481 [Drosophila grimshawi]
gi|193894200|gb|EDV93066.1| GH18481 [Drosophila grimshawi]
Length = 207
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/131 (78%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MATRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D+D
Sbjct: 121 VVLGNKVDLDN 131
>gi|353238218|emb|CCA70171.1| probable GTPase Rab7 protein [Piriformospora indica DSM 11827]
Length = 203
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/150 (72%), Positives = 126/150 (84%), Gaps = 4/150 (2%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FS+QYKATIGADFLTKEV +DRL T+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQA+P + +NFPFVVLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQANPQNAENFPFVVLGN 122
Query: 126 KIDVDGGNSRVVCFGEEGSSMVCLQRKYSL 155
KIDV+ +V + +M Q K S+
Sbjct: 123 KIDVEEHKRQVT----QKRAMAWCQAKGSI 148
>gi|195144966|ref|XP_002013467.1| GL23391 [Drosophila persimilis]
gi|198477435|ref|XP_002136615.1| GA29225 [Drosophila pseudoobscura pseudoobscura]
gi|194102410|gb|EDW24453.1| GL23391 [Drosophila persimilis]
gi|198142907|gb|EDY71619.1| GA29225 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/131 (78%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MATRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D+D
Sbjct: 121 VVLGNKVDLDN 131
>gi|313213249|emb|CBY37091.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 117/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FS+QYKATIGADFLTKEV +DR+ TLQ
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKEVLVDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F +L +W +EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKSLESWGDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKID++
Sbjct: 121 VVIGNKIDLE 130
>gi|299116473|emb|CBN76190.1| Rab7, RAB family GTPase [Ectocarpus siliculosus]
Length = 213
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/128 (78%), Positives = 116/128 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLK+IILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK+ +D+L TLQ
Sbjct: 1 MASRRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDTVIDDKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGA+ CVLVYD+ + KSF+ L++WREEFL QA+P DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLHQAAPMDPDNFPF 120
Query: 121 VVLGNKID 128
V++GNK+D
Sbjct: 121 VLIGNKVD 128
>gi|403416095|emb|CCM02795.1| predicted protein [Fibroporia radiculosa]
Length = 265
Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/132 (80%), Positives = 117/132 (88%), Gaps = 4/132 (3%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTKEV +DRL +WDTA
Sbjct: 69 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRL----LWDTA 124
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLGVAFYRGADCCVLVYDVNS KSF+ L++WR+EFLIQASP DP+NFPFVVLGN
Sbjct: 125 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 184
Query: 126 KIDVDGGNSRVV 137
KID++ +V
Sbjct: 185 KIDMEENKRQVT 196
>gi|294955682|ref|XP_002788627.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239904168|gb|EER20423.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 102/151 (67%), Positives = 125/151 (82%), Gaps = 4/151 (2%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFS QYKATIGADFLTKEV +D++ TLQIWD
Sbjct: 6 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTIDDKVVTLQIWD 65
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCC LVYD+ + KSF++L++WR+EFLIQASP DP+ FPFVV+
Sbjct: 66 TAGQERFQSLGVAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDPEEFPFVVV 125
Query: 124 GNKIDVDG----GNSRVVCFGEEGSSMVCLQ 150
GNK+D++ +R + +++ C +
Sbjct: 126 GNKLDMEAKRKVSKARATTWCRSKNTIPCFE 156
>gi|258567250|ref|XP_002584369.1| GTP-binding protein ypt7 [Uncinocarpus reesii 1704]
gi|237905815|gb|EEP80216.1| GTP-binding protein ypt7 [Uncinocarpus reesii 1704]
Length = 203
Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/130 (80%), Positives = 119/130 (91%), Gaps = 2/130 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKK+S YKATIGAD+LTKEV +DRL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVLVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+NL++WR+EFLIQASP DP++FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFENLDSWRDEFLIQASPRDPESFPF 120
Query: 121 VVLGNKIDVD 130
V GNK+DVD
Sbjct: 121 V--GNKVDVD 128
>gi|194910038|ref|XP_001982062.1| GG11243 [Drosophila erecta]
gi|195504976|ref|XP_002099310.1| GE23436 [Drosophila yakuba]
gi|190656700|gb|EDV53932.1| GG11243 [Drosophila erecta]
gi|194185411|gb|EDW99022.1| GE23436 [Drosophila yakuba]
Length = 207
Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 117/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MSGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+D+D
Sbjct: 121 VVLGNKVDLD 130
>gi|157136642|ref|XP_001663804.1| ras-related protein Rab-7 [Aedes aegypti]
gi|108880990|gb|EAT45215.1| AAEL003503-PA [Aedes aegypti]
Length = 208
Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 102/131 (77%), Positives = 117/131 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDS VGKTSLMNQYV K+FSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MATRKKVLLKVIILGDSSVGKTSLMNQYVTKRFSNQYKATIGADFLTKEVVIDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F NL++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|119393797|gb|ABL74414.1| Rab7 [Aedes albopictus]
Length = 208
Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 102/131 (77%), Positives = 117/131 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDS VGKTSLMNQYV K+FSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MATRKKVLLKVIILGDSSVGKTSLMNQYVTKRFSNQYKATIGADFLTKEVVIDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F NL++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|347966247|ref|XP_321482.4| AGAP001617-PA [Anopheles gambiae str. PEST]
gi|347966249|ref|XP_001689335.2| AGAP001617-PB [Anopheles gambiae str. PEST]
gi|333470146|gb|EAA00927.4| AGAP001617-PA [Anopheles gambiae str. PEST]
gi|333470147|gb|EDO63240.2| AGAP001617-PB [Anopheles gambiae str. PEST]
Length = 207
Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 101/131 (77%), Positives = 117/131 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVI+LGDS VGKTSLMNQYVNK+FSNQYKATIGADFLTKEV ++R+ T+Q
Sbjct: 1 MATRKKALLKVIVLGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVIDERVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYD + +F NL +WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLESWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|195452908|ref|XP_002073553.1| GK14177 [Drosophila willistoni]
gi|194169638|gb|EDW84539.1| GK14177 [Drosophila willistoni]
Length = 207
Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 102/131 (77%), Positives = 118/131 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MATRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP +P++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRNPEHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNK+D+D
Sbjct: 121 VVLGNKVDLDN 131
>gi|226295502|gb|ACO40522.1| Rab7-like protein [Pinctada martensi]
Length = 206
Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/131 (80%), Positives = 119/131 (90%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIG-ADFLTKEVQFEDRLFTL 59
M SR++ LLKVIILGDSGVGKTSLM+QYVNKKFSNQYKATIG ADFLTKEV EDRL T+
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMSQYVNKKFSNQYKATIGSADFLTKEVMVEDRLLTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGA CCVLV+DV +F++L++WR+EFLIQASP DP+NFP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGAHCCVLVFDVPMPNTFESLDSWRDEFLIQASPRDPENFP 120
Query: 120 FVVLGNKIDVD 130
FVV+GNKIDV+
Sbjct: 121 FVVIGNKIDVE 131
>gi|294867886|ref|XP_002765277.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239865290|gb|EEQ97994.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 100/128 (78%), Positives = 117/128 (91%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFS QYKATIGADFLTKEV +D++ TLQIWD
Sbjct: 6 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTIDDKVVTLQIWD 65
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCC LVYD+ + KSF++L++WR+EFLIQASP DP+ FPFVV+
Sbjct: 66 TAGQERFQSLGVAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDPEEFPFVVV 125
Query: 124 GNKIDVDG 131
GNK+D++
Sbjct: 126 GNKLDMEA 133
>gi|315044527|ref|XP_003171639.1| GTP-binding protein ypt7 [Arthroderma gypseum CBS 118893]
gi|327297278|ref|XP_003233333.1| vacuolar biogenesis protein [Trichophyton rubrum CBS 118892]
gi|311343982|gb|EFR03185.1| GTP-binding protein ypt7 [Arthroderma gypseum CBS 118893]
gi|326464639|gb|EGD90092.1| vacuolar biogenesis protein [Trichophyton rubrum CBS 118892]
gi|326472371|gb|EGD96380.1| vacuolar biogenesis protein [Trichophyton tonsurans CBS 112818]
gi|326481596|gb|EGE05606.1| vacuolar biogenesis protein [Trichophyton equinum CBS 127.97]
Length = 205
Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 118/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKK+S YKATIGAD+LTKEV + RL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVMVDGRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQA+ DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQANLRDPESFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|296809872|ref|XP_002845274.1| GTP-binding protein ypt7 [Arthroderma otae CBS 113480]
gi|238842662|gb|EEQ32324.1| GTP-binding protein ypt7 [Arthroderma otae CBS 113480]
Length = 205
Score = 221 bits (562), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 118/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKK+S YKATIGAD+LTKEV + RL T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVMVDGRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQA+ DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQANLRDPESFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNKIDV+
Sbjct: 121 VVLGNKIDVE 130
>gi|242004078|ref|XP_002422965.1| rab9 and, putative [Pediculus humanus corporis]
gi|212505881|gb|EEB10227.1| rab9 and, putative [Pediculus humanus corporis]
Length = 206
Score = 221 bits (562), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 117/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTS+MNQYVN KFSNQYKATIGADFLT++V DR T+Q
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSIMNQYVNNKFSNQYKATIGADFLTRDVDVGDRRVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV++ ++ +L NWR+EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTTYKSLENWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKIDV+
Sbjct: 121 VVIGNKIDVE 130
>gi|289743679|gb|ADD20587.1| Rab protein 7 [Glossina morsitans morsitans]
Length = 208
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 118/130 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDS VGKTS+MNQYV+K+FSNQYKATIGADF TKEV +DR+ T+Q
Sbjct: 1 MASRKKSLLKVIILGDSSVGKTSIMNQYVSKRFSNQYKATIGADFCTKEVVLDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV S SF NL+ WR+EFLIQASP DP++FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNSFKNLDWWRDEFLIQASPRDPEHFPF 120
Query: 121 VVLGNKIDVD 130
VVLGNK+D+D
Sbjct: 121 VVLGNKVDMD 130
>gi|308802790|ref|XP_003078708.1| possible apospory-associated protein (ISS) [Ostreococcus tauri]
gi|116057161|emb|CAL51588.1| possible apospory-associated protein (ISS) [Ostreococcus tauri]
Length = 209
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/149 (69%), Positives = 120/149 (80%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R RTLLKVIILGDSGVGKTSLM+QYVN KFS QYKATIGADF+TKE+ +D + TLQIW
Sbjct: 4 ARARTLLKVIILGDSGVGKTSLMSQYVNNKFSKQYKATIGADFMTKEITVDDTVVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGV+FYRGADC + VYDVNS KSF++L NWR EFL+QASPSDPD FP VV
Sbjct: 64 DTAGQERFQSLGVSFYRGADCVMCVYDVNSAKSFESLENWRNEFLVQASPSDPDKFPIVV 123
Query: 123 LGNKIDVDGGNSRVVCFGEEGSSMVCLQR 151
+GNKIDV+ G E+ + C +
Sbjct: 124 VGNKIDVEEGKESKRVISEKKAKSWCTSK 152
>gi|340519278|gb|EGR49517.1| small GTPase of the Rab/Ypt family [Trichoderma reesei QM6a]
Length = 206
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 118/131 (90%), Gaps = 1/131 (0%)
Query: 1 MPSR-RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTL 59
M SR ++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+
Sbjct: 1 MSSRNKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFP
Sbjct: 61 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNFP 120
Query: 120 FVVLGNKIDVD 130
FVVLGNKIDV+
Sbjct: 121 FVVLGNKIDVE 131
>gi|324508943|gb|ADY43771.1| Ras-related protein Rab-7a [Ascaris suum]
Length = 213
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/131 (76%), Positives = 117/131 (89%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R+++LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK+V DR+ T+QIWD
Sbjct: 9 RKKSLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDVMIGDRMVTMQIWD 68
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVL YDV + SF +L +WR+EFLIQASP DP++FPFV+L
Sbjct: 69 TAGQERFQSLGVAFYRGADCCVLTYDVTNASSFKSLESWRDEFLIQASPRDPEHFPFVLL 128
Query: 124 GNKIDVDGGNS 134
GNKID++ +
Sbjct: 129 GNKIDLEANRA 139
>gi|358392434|gb|EHK41838.1| hypothetical protein TRIATDRAFT_312376 [Trichoderma atroviride IMI
206040]
Length = 206
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 118/131 (90%), Gaps = 1/131 (0%)
Query: 1 MPSR-RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTL 59
M SR ++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+
Sbjct: 1 MSSRNKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFP
Sbjct: 61 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPPNFP 120
Query: 120 FVVLGNKIDVD 130
FVVLGNKIDV+
Sbjct: 121 FVVLGNKIDVE 131
>gi|358388492|gb|EHK26085.1| ras-related small GTPase [Trichoderma virens Gv29-8]
Length = 206
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 118/131 (90%), Gaps = 1/131 (0%)
Query: 1 MPSR-RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTL 59
M SR ++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EV +DR T+
Sbjct: 1 MSSRNKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFP
Sbjct: 61 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPPNFP 120
Query: 120 FVVLGNKIDVD 130
FVVLGNKIDV+
Sbjct: 121 FVVLGNKIDVE 131
>gi|115387465|ref|XP_001211238.1| GTP-binding protein ypt7 [Aspergillus terreus NIH2624]
gi|114195322|gb|EAU37022.1| GTP-binding protein ypt7 [Aspergillus terreus NIH2624]
Length = 280
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/149 (72%), Positives = 120/149 (80%), Gaps = 19/149 (12%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFT-- 58
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL T
Sbjct: 57 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 116
Query: 59 -----------------LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNN 101
LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++
Sbjct: 117 ARPQMTRPVMYPRLIHDLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDS 176
Query: 102 WREEFLIQASPSDPDNFPFVVLGNKIDVD 130
WR+EFLIQASP DP++FPFVV+GNKIDV+
Sbjct: 177 WRDEFLIQASPRDPESFPFVVIGNKIDVE 205
>gi|238914583|gb|ACR78134.1| predicted Rab7-like GTPase [Beauveria bassiana]
gi|346319897|gb|EGX89498.1| Ras-related protein Rab7 [Cordyceps militaris CM01]
gi|400600968|gb|EJP68636.1| Putative Rab7-like GTPase [Beauveria bassiana ARSEF 2860]
Length = 205
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 116/130 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLM QYV+K+FS YKATIGADF TKEV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMKQYVDKEFSASYKATIGADFSTKEVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKIDVD
Sbjct: 121 VVIGNKIDVD 130
>gi|19113099|ref|NP_596307.1| GTPase Ypt7 [Schizosaccharomyces pombe 972h-]
gi|12230853|sp|O94655.1|YPT7_SCHPO RecName: Full=GTP-binding protein ypt7
gi|4490676|emb|CAB38603.1| GTPase Ypt7 [Schizosaccharomyces pombe]
Length = 205
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 98/130 (75%), Positives = 119/130 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++ LLKVIILG+SGVGKTS+MNQYVN+KFS YKATIGADFLTKEV +D++ TLQ
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASPS+P+ FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPF 120
Query: 121 VVLGNKIDVD 130
++LGNK+DV+
Sbjct: 121 ILLGNKVDVE 130
>gi|126652803|ref|XP_001388379.1| Rab7 GTPase [Cryptosporidium parvum Iowa II]
gi|126117472|gb|EAZ51572.1| Rab7 GTPase, putative [Cryptosporidium parvum Iowa II]
gi|323510277|dbj|BAJ78032.1| cgd7_1680 [Cryptosporidium parvum]
Length = 215
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/134 (75%), Positives = 119/134 (88%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R+R LLKVIILGDSGVGKTSLMNQYVN KFS QYKATIGADFLTK++ +++L TLQIW
Sbjct: 9 NRKRVLLKVIILGDSGVGKTSLMNQYVNSKFSTQYKATIGADFLTKDIVIDNKLVTLQIW 68
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCC LVYD+ + KSF+ L+ WREEFLIQA+P DP++FPFVV
Sbjct: 69 DTAGQERFQSLGVAFYRGADCCALVYDMTNPKSFEGLDAWREEFLIQATPKDPNSFPFVV 128
Query: 123 LGNKIDVDGGNSRV 136
LGNK+D+D + +V
Sbjct: 129 LGNKLDLDQKSRKV 142
>gi|159126835|gb|EDP51951.1| alpha-galactosidase, putative [Aspergillus fumigatus A1163]
Length = 201
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 117/130 (90%), Gaps = 4/130 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRL---- 56
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 57 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 116
Query: 121 VVLGNKIDVD 130
VV+GNKIDV+
Sbjct: 117 VVIGNKIDVE 126
>gi|331240467|ref|XP_003332884.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|331240475|ref|XP_003332888.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309311874|gb|EFP88465.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309311878|gb|EFP88469.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 237
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/166 (66%), Positives = 123/166 (74%), Gaps = 30/166 (18%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE------- 53
M SR++ LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLTKEV E
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVYIESNDSTTQ 60
Query: 54 -----------------------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDV 90
DR+ T+Q+WDTAGQERFQSLGVAFYRGADCCVLV+DV
Sbjct: 61 PSSTNPQQAPSSSVVSTNTNNGSDRVVTMQLWDTAGQERFQSLGVAFYRGADCCVLVFDV 120
Query: 91 NSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRV 136
NS KSF+ L++WR+EFLIQASP DPDNFPFVVLGNKIDV+ +V
Sbjct: 121 NSSKSFETLDSWRDEFLIQASPRDPDNFPFVVLGNKIDVEENKRQV 166
>gi|301117014|ref|XP_002906235.1| Rab7 family GTPase, putative [Phytophthora infestans T30-4]
gi|262107584|gb|EEY65636.1| Rab7 family GTPase, putative [Phytophthora infestans T30-4]
Length = 206
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 98/128 (76%), Positives = 113/128 (88%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LLK+IILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+ +D+L T+Q
Sbjct: 1 MSHRKKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD CVLVYD+ + KSF+ L+ WR+EFL QA P DPD FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPF 120
Query: 121 VVLGNKID 128
+VLGNK+D
Sbjct: 121 IVLGNKVD 128
>gi|209879788|ref|XP_002141334.1| Rab7 GTPase protein [Cryptosporidium muris RN66]
gi|209556940|gb|EEA06985.1| Rab7 GTPase protein, putative [Cryptosporidium muris RN66]
Length = 213
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/134 (76%), Positives = 118/134 (88%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R+R LLKVIILGDSGVGKTSLMNQYVNKKFS QYKATIGADFLTK++ +++L TLQIW
Sbjct: 9 NRKRVLLKVIILGDSGVGKTSLMNQYVNKKFSMQYKATIGADFLTKDIVIDNKLVTLQIW 68
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCC LVYD+ + KSFD L WREEFLIQA+P DP+ FPFVV
Sbjct: 69 DTAGQERFQSLGVAFYRGADCCALVYDMTNPKSFDGLEAWREEFLIQAAPKDPNCFPFVV 128
Query: 123 LGNKIDVDGGNSRV 136
+GNK+D+D + +V
Sbjct: 129 IGNKLDLDQKSRKV 142
>gi|348688127|gb|EGZ27941.1| hypothetical protein PHYSODRAFT_284160 [Phytophthora sojae]
Length = 207
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 98/128 (76%), Positives = 113/128 (88%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LLK+IILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+ +D+L T+Q
Sbjct: 1 MSHRKKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD CVLVYD+ + KSF+ L+ WR+EFL QA P DPD FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPF 120
Query: 121 VVLGNKID 128
+VLGNK+D
Sbjct: 121 IVLGNKVD 128
>gi|70997379|ref|XP_753438.1| Rab small monomeric GTPase Rab7 [Aspergillus fumigatus Af293]
gi|66851074|gb|EAL91400.1| Rab small monomeric GTPase Rab7, putative [Aspergillus fumigatus
Af293]
Length = 171
Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 105/130 (80%), Positives = 117/130 (90%), Gaps = 4/130 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRL---- 56
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 57 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 116
Query: 121 VVLGNKIDVD 130
VV+GNKIDV+
Sbjct: 117 VVIGNKIDVE 126
>gi|145345429|ref|XP_001417213.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577440|gb|ABO95506.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 207
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/149 (69%), Positives = 119/149 (79%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ RRTLLKVIILGDSGVGKTSLM QYVN KFS QYKATIGADF+TKE+ +D + TLQIW
Sbjct: 2 ASRRTLLKVIILGDSGVGKTSLMAQYVNNKFSKQYKATIGADFMTKEIVIDDTVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGV+FYRGADC + VYDVNS KSF++L NWR EFL+QASPSDP+ FP VV
Sbjct: 62 DTAGQERFQSLGVSFYRGADCVMCVYDVNSAKSFESLENWRNEFLVQASPSDPEKFPVVV 121
Query: 123 LGNKIDVDGGNSRVVCFGEEGSSMVCLQR 151
+GNKIDV+ G E+ + C +
Sbjct: 122 VGNKIDVEDGKDSKRVISEKKAKSWCTSK 150
>gi|308502456|ref|XP_003113412.1| CRE-RAB-7 protein [Caenorhabditis remanei]
gi|308263371|gb|EFP07324.1| CRE-RAB-7 protein [Caenorhabditis remanei]
Length = 245
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 98/129 (75%), Positives = 117/129 (90%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R++ LLKVIILGDSGVGKTSLMNQYVN++FSNQYKATIGADFLT++V +DR TLQIW
Sbjct: 40 TRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIW 99
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVL +DV + SF +L++WR+EFLIQASP DPD+FPFV+
Sbjct: 100 DTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVL 159
Query: 123 LGNKIDVDG 131
LGNK+D++
Sbjct: 160 LGNKVDLES 168
>gi|389582872|dbj|GAB65608.1| small GTPase Rab7 [Plasmodium cynomolgi strain B]
Length = 184
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 117/128 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++RT+LKVIILGDSGVGKTSLMNQYVNKKF+NQYKATIGADFLTKE ++ T+Q
Sbjct: 1 MSNKKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNEHLTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+D+ + K++++L +W++EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPDNFPF 120
Query: 121 VVLGNKID 128
V++GNK+D
Sbjct: 121 VIIGNKVD 128
>gi|17536699|ref|NP_496549.1| Protein RAB-7 [Caenorhabditis elegans]
gi|268533066|ref|XP_002631661.1| C. briggsae CBR-RAB-7 protein [Caenorhabditis briggsae]
gi|3880453|emb|CAA91357.1| Protein RAB-7 [Caenorhabditis elegans]
gi|341885407|gb|EGT41342.1| hypothetical protein CAEBREN_32671 [Caenorhabditis brenneri]
Length = 209
Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 98/128 (76%), Positives = 117/128 (91%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R++ LLKVIILGDSGVGKTSLMNQYVN++FSNQYKATIGADFLT++V +DR TLQIW
Sbjct: 4 TRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVL +DV + SF +L++WR+EFLIQASP DPD+FPFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVL 123
Query: 123 LGNKIDVD 130
LGNK+D++
Sbjct: 124 LGNKVDLE 131
>gi|399163149|gb|AFP33150.1| rab-7, partial [Caenorhabditis elegans]
Length = 208
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/128 (76%), Positives = 117/128 (91%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R++ LLKVIILGDSGVGKTSLMNQYVN++FSNQYKATIGADFLT++V +DR TLQIW
Sbjct: 3 TRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIW 62
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVL +DV + SF +L++WR+EFLIQASP DPD+FPFV+
Sbjct: 63 DTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVL 122
Query: 123 LGNKIDVD 130
LGNK+D++
Sbjct: 123 LGNKVDLE 130
>gi|312088377|ref|XP_003145838.1| RAB family member [Loa loa]
gi|307758997|gb|EFO18231.1| Ras-like protein Rab-7a [Loa loa]
Length = 212
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/128 (77%), Positives = 114/128 (89%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK++ DR T+QIWD
Sbjct: 8 RKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDISVGDRTVTMQIWD 67
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVL YD+ + SF +L +WR+EFLIQASP DP++FPFV+L
Sbjct: 68 TAGQERFQSLGVAFYRGADCCVLTYDITNASSFRSLESWRDEFLIQASPRDPEHFPFVLL 127
Query: 124 GNKIDVDG 131
GNKID++
Sbjct: 128 GNKIDLEA 135
>gi|170579042|ref|XP_001894651.1| ras-related protein Rab-7 [Brugia malayi]
gi|158598646|gb|EDP36501.1| ras-related protein Rab-7, putative [Brugia malayi]
Length = 212
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/128 (77%), Positives = 114/128 (89%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK++ DR T+QIWD
Sbjct: 8 RKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDISVGDRTVTMQIWD 67
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVL YD+ + SF +L +WR+EFLIQASP DP++FPFV+L
Sbjct: 68 TAGQERFQSLGVAFYRGADCCVLTYDITNASSFRSLESWRDEFLIQASPRDPEHFPFVLL 127
Query: 124 GNKIDVDG 131
GNKID++
Sbjct: 128 GNKIDLEA 135
>gi|224081256|ref|XP_002306355.1| predicted protein [Populus trichocarpa]
gi|222855804|gb|EEE93351.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 119/140 (85%), Gaps = 3/140 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQY--VNKKFSNQYKATIGADFLTKEVQFEDRLFT 58
M RR LLKVI+LGD GVGKTSLMNQY V KKFS QYK+TIGADF+TKE+Q +D+L T
Sbjct: 1 MDMSRRALLKVIVLGDIGVGKTSLMNQYPYVYKKFSQQYKSTIGADFVTKELQIDDKLVT 60
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQAS-PSDPDN 117
LQIWDTAGQERFQSLG AFYRGADCCVLVYDVN KSF+ LNNW EEF+ QA+ P+DP
Sbjct: 61 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNIQKSFETLNNWHEEFVKQAADPADPGA 120
Query: 118 FPFVVLGNKIDVDGGNSRVV 137
FPF++ GNKIDVDGG+SRVV
Sbjct: 121 FPFILFGNKIDVDGGSSRVV 140
>gi|402589927|gb|EJW83858.1| Rab7 protein [Wuchereria bancrofti]
Length = 212
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/128 (77%), Positives = 114/128 (89%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK++ DR T+QIWD
Sbjct: 8 RKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDISVGDRTVTMQIWD 67
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFYRGADCCVL YD+ + SF +L +WR+EFLIQASP DP++FPFV+L
Sbjct: 68 TAGQERFQSLGVAFYRGADCCVLTYDITNASSFRSLESWRDEFLIQASPRDPEHFPFVLL 127
Query: 124 GNKIDVDG 131
GNKID++
Sbjct: 128 GNKIDLEA 135
>gi|213407064|ref|XP_002174303.1| GTPase Ypt7 [Schizosaccharomyces japonicus yFS275]
gi|212002350|gb|EEB08010.1| GTPase Ypt7 [Schizosaccharomyces japonicus yFS275]
Length = 205
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 120/130 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LLKVIILG+SGVGKTSLMNQ+VN+KFS YKATIGADFLTKEV +D++ TLQ
Sbjct: 1 MAIRKKLLLKVIILGESGVGKTSLMNQFVNRKFSKDYKATIGADFLTKEVVVDDKIVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KS+++L++WR+EFLIQASP++P+ FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSYESLDSWRDEFLIQASPNNPETFPF 120
Query: 121 VVLGNKIDVD 130
+++GNK+DV+
Sbjct: 121 ILIGNKVDVE 130
>gi|156097076|ref|XP_001614571.1| small GTPase Rab7 [Plasmodium vivax Sal-1]
gi|148803445|gb|EDL44844.1| small GTPase Rab7, putative [Plasmodium vivax]
Length = 206
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 117/128 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++RT+LKVIILGDSGVGKTSLMNQYVNKKF+NQYKATIGADFLTKE ++ T+Q
Sbjct: 1 MSNKKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNEHLTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+D+ + K++++L +W++EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPDNFPF 120
Query: 121 VVLGNKID 128
V++GNK+D
Sbjct: 121 VIIGNKVD 128
>gi|67515615|ref|XP_657693.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Aspergillus nidulans
FGSC A4]
gi|40746111|gb|EAA65267.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Aspergillus nidulans
FGSC A4]
Length = 201
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 117/130 (90%), Gaps = 4/130 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ +LKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLTKEV +DRL
Sbjct: 1 MSSRKKVMLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRL---- 56
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPF
Sbjct: 57 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 116
Query: 121 VVLGNKIDVD 130
VV+GNKID++
Sbjct: 117 VVIGNKIDME 126
>gi|221054328|ref|XP_002258303.1| Rab7 GTPase [Plasmodium knowlesi strain H]
gi|193808372|emb|CAQ39075.1| Rab7 GTPase, putative [Plasmodium knowlesi strain H]
Length = 206
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 117/128 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++RT+LKVIILGDSGVGKTSLMNQYVNKKF+NQYKATIGADFLTKE ++ T+Q
Sbjct: 1 MSNKKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNENLTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+D+ + K++++L +W++EFLIQASP DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPDNFPF 120
Query: 121 VVLGNKID 128
V++GNK+D
Sbjct: 121 VIIGNKVD 128
>gi|296005155|ref|XP_002808912.1| PfRab7, GTPase [Plasmodium falciparum 3D7]
gi|13509187|emb|CAB92946.2| putative Rab7 GTPase [Plasmodium falciparum 3D7]
gi|225631795|emb|CAX64193.1| PfRab7, GTPase [Plasmodium falciparum 3D7]
Length = 206
Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 95/128 (74%), Positives = 117/128 (91%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++RT+LKVIILGDSGVGKTSLMNQYVNKKF+NQYKATIGADFLTKE ++ T+Q
Sbjct: 1 MSNKKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNEQITMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+D+ + K++++L +W++EFLIQASP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPENFPF 120
Query: 121 VVLGNKID 128
V++GNK+D
Sbjct: 121 VIIGNKVD 128
>gi|406602416|emb|CCH46032.1| hypothetical protein BN7_5619 [Wickerhamomyces ciferrii]
Length = 205
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/137 (72%), Positives = 122/137 (89%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++TLLKVIILGDSGVGKTSLM Q+VN KFSNQYKATIGADFLTKE+ +D+ T+Q
Sbjct: 1 MSSKKKTLLKVIILGDSGVGKTSLMQQFVNGKFSNQYKATIGADFLTKELTIDDKSVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N++ W++EFLIQA+ +P+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVTNQKSFENISLWKDEFLIQANVKNPENFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
V++GNK+DVD N +V+
Sbjct: 121 VIIGNKVDVD-ENKKVI 136
>gi|119393799|gb|ABL74415.1| Rab7 [Aedes pseudoscutellaris]
Length = 208
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/131 (76%), Positives = 115/131 (87%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDS VGKTSLMNQYV K+FSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MATRKKVLLKVIILGDSSVGKTSLMNQYVTKRFSNQYKATIGADFLTKEVVIDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQ LGVAFYRGADC VLVYD + +F NL++WR+EFLIQASP DPD+FPF
Sbjct: 61 IWDTAGQERFQLLGVAFYRGADCYVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPF 120
Query: 121 VVLGNKIDVDG 131
VVLGNKID++
Sbjct: 121 VVLGNKIDLEN 131
>gi|226294109|gb|EEH49529.1| GTP-binding protein ypt7 [Paracoccidioides brasiliensis Pb18]
Length = 226
Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 100/128 (78%), Positives = 116/128 (90%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SR L VI+LGDSGVGKTSLMNQYVNKK+S+ YKATIGAD+LTK+V +DRL TLQ+W
Sbjct: 24 SRFTFLFPVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQLW 83
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFL+QASP DP++FPFVV
Sbjct: 84 DTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLVQASPRDPESFPFVV 143
Query: 123 LGNKIDVD 130
LGNKIDV+
Sbjct: 144 LGNKIDVE 151
>gi|47900425|gb|AAT39219.1| putative GTPase [Oryza sativa Japonica Group]
Length = 197
Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 113/135 (83%), Gaps = 9/135 (6%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
SRRRTLLKVI+LGDSG YVNKKFS QYKATIGADF+TKEV EDRL TLQIW
Sbjct: 4 SRRRTLLKVIVLGDSG---------YVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIW 54
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGADCC+LVYDVN+ +SF+ LN W +EFL QASPSDP +FPF++
Sbjct: 55 DTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFIL 114
Query: 123 LGNKIDVDGGNSRVV 137
LGNKID+D GN R +
Sbjct: 115 LGNKIDIDAGNRRAI 129
>gi|70906330|gb|AAZ14934.1| putative GTPase [Coprinellus disseminatus]
Length = 177
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/135 (75%), Positives = 114/135 (84%), Gaps = 1/135 (0%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK V+ +D+ T+Q+WDT
Sbjct: 4 RSALLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKSVEVDDQQVTIQLWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS-DPDNFPFVVL 123
AGQERFQSLGVAFYRGADCCVLV+DVNS KSF L WR+EFLIQASP DP+ FPFVV+
Sbjct: 64 AGQERFQSLGVAFYRGADCCVLVFDVNSSKSFQALEGWRDEFLIQASPQGDPEEFPFVVV 123
Query: 124 GNKIDVDGGNSRVVC 138
GNK+DV + C
Sbjct: 124 GNKVDVTQKRAMAWC 138
>gi|323447751|gb|EGB03662.1| hypothetical protein AURANDRAFT_59604 [Aureococcus anophagefferens]
Length = 207
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 113/126 (89%), Gaps = 1/126 (0%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQIW 62
R++ LLKVIILGDSGVGKT+LMNQYVNK+FS YKATIGADFLTKEV +D +L TLQIW
Sbjct: 3 RKKVLLKVIILGDSGVGKTALMNQYVNKRFSASYKATIGADFLTKEVMIDDDKLVTLQIW 62
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLGVAFYRGAD C+LVYD+ KSFDNL++WREEFL+QASP D +NFPF+V
Sbjct: 63 DTAGQERFQSLGVAFYRGADACILVYDITQPKSFDNLDSWREEFLVQASPPDIENFPFIV 122
Query: 123 LGNKID 128
LGNK+D
Sbjct: 123 LGNKVD 128
>gi|449461445|ref|XP_004148452.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|449503042|ref|XP_004161814.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
Length = 209
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/137 (72%), Positives = 118/137 (86%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
+ + +R LLKVI LGDSGVGKTSLMN+YV KKF+ QYKATIGADF+TKE++ +D+L TLQ
Sbjct: 3 VSATKRRLLKVIFLGDSGVGKTSLMNRYVYKKFNLQYKATIGADFMTKELRIDDQLVTLQ 62
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLG AFYRGADCCV VYDVN KSF++L++W EEFL QA P+DP FPF
Sbjct: 63 VWDTAGQERFQSLGAAFYRGADCCVFVYDVNVTKSFESLSSWHEEFLKQAEPADPKAFPF 122
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNKIDVD G+SR V
Sbjct: 123 LLLGNKIDVDDGHSRAV 139
>gi|385301293|gb|EIF45495.1| gtpase rab7 [Dekkera bruxellensis AWRI1499]
Length = 205
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/137 (73%), Positives = 119/137 (86%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RR+T+LKVIILGDSGVGKTSLM Q++N KFS QYKATIGADFL K++ +D+ T+Q
Sbjct: 1 MSGRRKTILKVIILGDSGVGKTSLMQQFINGKFSQQYKATIGADFLPKDMNIDDKQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRG+DCCVLV+DV + KSF+NL NWR+EFLIQA+ DPD+FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGSDCCVLVFDVTNSKSFENLQNWRDEFLIQANIKDPDSFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKIDVD + RVV
Sbjct: 121 VVIGNKIDVD-ESKRVV 136
>gi|391336619|ref|XP_003742676.1| PREDICTED: ras-related protein Rab-7a-like [Metaseiulus
occidentalis]
Length = 207
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 116/130 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVI+LGDSGVGKT LMNQ+V+KKF+NQYKATIGADF TKEV +++L TLQ
Sbjct: 1 MSNRKKVLLKVIVLGDSGVGKTCLMNQFVSKKFTNQYKATIGADFQTKEVMVDNKLITLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGV FYRGADCCVLVYDV S +F +L +WR+EFLIQ+SP DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVGFYRGADCCVLVYDVTSPTTFKSLESWRDEFLIQSSPKDPENFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKID++
Sbjct: 121 VVIGNKIDLE 130
>gi|50556440|ref|XP_505628.1| YALI0F19602p [Yarrowia lipolytica]
gi|49651498|emb|CAG78437.1| YALI0F19602p [Yarrowia lipolytica CLIB122]
Length = 205
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 113/130 (86%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP ++RT+LKV+ILGDSGVGK+SLM QYVN KFS QYKATIGADFL KE+ E R +Q
Sbjct: 1 MPPKKRTMLKVVILGDSGVGKSSLMQQYVNNKFSTQYKATIGADFLNKELTLEGRKVNMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG+AFYRGADCCVLVYDVN+ KSFD L WR+EFL+ A+P DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGLAFYRGADCCVLVYDVNNSKSFDALTLWRDEFLLLANPRDPENFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNK+DV+
Sbjct: 121 VVIGNKVDVE 130
>gi|320582172|gb|EFW96390.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 206
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/137 (72%), Positives = 120/137 (87%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++T+LKVIILGDSGVGKTSLM Q++N KFS QYKATIGADFL K++ +D+ T+Q
Sbjct: 1 MSTRKKTILKVIILGDSGVGKTSLMQQFINGKFSQQYKATIGADFLPKDLVIDDKQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRG+DCCVLVYDV + KSF+NL +W++EFLIQA+ DPDNFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGSDCCVLVYDVTNTKSFENLQSWKDEFLIQANIKDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNKIDV+ N R+V
Sbjct: 121 VVIGNKIDVE-ENKRLV 136
>gi|399932055|gb|AFP57563.1| Ras-related protein Rab-7a [Latrodectus hesperus]
Length = 206
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/130 (75%), Positives = 115/130 (88%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMN YVNK+FSNQYKATIGADFLT+EVQ DRL T+Q
Sbjct: 1 MTSRKKLLLKVIILGDSGVGKTSLMNMYVNKRFSNQYKATIGADFLTREVQVNDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AF+RGADCCVLVYDV S SF +L+NW +EF++Q+ P +P+ FPF
Sbjct: 61 IWDTAGQERFQSLGHAFFRGADCCVLVYDVTSPTSFKSLDNWFDEFMVQSGPRNPEEFPF 120
Query: 121 VVLGNKIDVD 130
VV+GNKID++
Sbjct: 121 VVIGNKIDLE 130
>gi|440550043|gb|AGC11524.1| Rab GTPase, partial [Larix sibirica]
gi|440550045|gb|AGC11525.1| Rab GTPase, partial [Larix sibirica]
gi|440550047|gb|AGC11526.1| Rab GTPase, partial [Larix sibirica]
gi|440550049|gb|AGC11527.1| Rab GTPase, partial [Larix sibirica]
gi|440550051|gb|AGC11528.1| Rab GTPase, partial [Larix sibirica]
gi|440550055|gb|AGC11530.1| Rab GTPase, partial [Larix sibirica]
gi|440550057|gb|AGC11531.1| Rab GTPase, partial [Larix sibirica]
gi|440550059|gb|AGC11532.1| Rab GTPase, partial [Larix sibirica]
gi|440550061|gb|AGC11533.1| Rab GTPase, partial [Larix sibirica]
gi|440550065|gb|AGC11535.1| Rab GTPase, partial [Larix sibirica]
gi|440550068|gb|AGC11536.1| Rab GTPase, partial [Larix sibirica]
gi|440550070|gb|AGC11537.1| Rab GTPase, partial [Larix sibirica]
gi|440550072|gb|AGC11538.1| Rab GTPase, partial [Larix sibirica]
gi|440550074|gb|AGC11539.1| Rab GTPase, partial [Larix sibirica]
gi|440550076|gb|AGC11540.1| Rab GTPase, partial [Larix sibirica]
gi|440550078|gb|AGC11541.1| Rab GTPase, partial [Larix sibirica]
gi|440550080|gb|AGC11542.1| Rab GTPase, partial [Larix sibirica]
gi|440550082|gb|AGC11543.1| Rab GTPase, partial [Larix sibirica]
gi|440550086|gb|AGC11545.1| Rab GTPase, partial [Larix sibirica]
gi|440550088|gb|AGC11546.1| Rab GTPase, partial [Larix sibirica]
gi|440550090|gb|AGC11547.1| Rab GTPase, partial [Larix sibirica]
gi|440550092|gb|AGC11548.1| Rab GTPase, partial [Larix sibirica]
gi|440550094|gb|AGC11549.1| Rab GTPase, partial [Larix sibirica]
gi|440550096|gb|AGC11550.1| Rab GTPase, partial [Larix sibirica]
gi|440550098|gb|AGC11551.1| Rab GTPase, partial [Larix sibirica]
gi|440550100|gb|AGC11552.1| Rab GTPase, partial [Larix sibirica]
gi|440550104|gb|AGC11554.1| Rab GTPase, partial [Larix sibirica]
gi|440550106|gb|AGC11555.1| Rab GTPase, partial [Larix sibirica]
gi|440550108|gb|AGC11556.1| Rab GTPase, partial [Larix sibirica]
gi|440550110|gb|AGC11557.1| Rab GTPase, partial [Larix sibirica]
gi|440550112|gb|AGC11558.1| Rab GTPase, partial [Larix sibirica]
gi|440550114|gb|AGC11559.1| Rab GTPase, partial [Larix sibirica]
gi|440550116|gb|AGC11560.1| Rab GTPase, partial [Larix sibirica]
gi|440550118|gb|AGC11561.1| Rab GTPase, partial [Larix sibirica]
gi|440550120|gb|AGC11562.1| Rab GTPase, partial [Larix sibirica]
gi|440550122|gb|AGC11563.1| Rab GTPase, partial [Larix sibirica]
gi|440550124|gb|AGC11564.1| Rab GTPase, partial [Larix sibirica]
gi|440550126|gb|AGC11565.1| Rab GTPase, partial [Larix sibirica]
gi|440550128|gb|AGC11566.1| Rab GTPase, partial [Larix sibirica]
gi|440550130|gb|AGC11567.1| Rab GTPase, partial [Larix sibirica]
gi|440550132|gb|AGC11568.1| Rab GTPase, partial [Larix sibirica]
gi|440550134|gb|AGC11569.1| Rab GTPase, partial [Larix sibirica]
gi|440550136|gb|AGC11570.1| Rab GTPase, partial [Larix sibirica]
gi|440550138|gb|AGC11571.1| Rab GTPase, partial [Larix sibirica]
gi|440550140|gb|AGC11572.1| Rab GTPase, partial [Larix sibirica]
gi|440550142|gb|AGC11573.1| Rab GTPase, partial [Larix sibirica]
gi|440550144|gb|AGC11574.1| Rab GTPase, partial [Larix sibirica]
gi|440550146|gb|AGC11575.1| Rab GTPase, partial [Larix sibirica]
gi|440550148|gb|AGC11576.1| Rab GTPase, partial [Larix sibirica]
gi|440550150|gb|AGC11577.1| Rab GTPase, partial [Larix sibirica]
gi|440550152|gb|AGC11578.1| Rab GTPase, partial [Larix sibirica]
gi|440550154|gb|AGC11579.1| Rab GTPase, partial [Larix sibirica]
gi|440550156|gb|AGC11580.1| Rab GTPase, partial [Larix sibirica]
gi|440550158|gb|AGC11581.1| Rab GTPase, partial [Larix sibirica]
gi|440550160|gb|AGC11582.1| Rab GTPase, partial [Larix sibirica]
gi|440550162|gb|AGC11583.1| Rab GTPase, partial [Larix sibirica]
gi|440550164|gb|AGC11584.1| Rab GTPase, partial [Larix sibirica]
gi|440550166|gb|AGC11585.1| Rab GTPase, partial [Larix sibirica]
gi|440550168|gb|AGC11586.1| Rab GTPase, partial [Larix sibirica]
gi|440550170|gb|AGC11587.1| Rab GTPase, partial [Larix sibirica]
gi|440550172|gb|AGC11588.1| Rab GTPase, partial [Larix sibirica]
gi|440550174|gb|AGC11589.1| Rab GTPase, partial [Larix sibirica]
gi|440550176|gb|AGC11590.1| Rab GTPase, partial [Larix sibirica]
gi|440550178|gb|AGC11591.1| Rab GTPase, partial [Larix sibirica]
gi|440550180|gb|AGC11592.1| Rab GTPase, partial [Larix sibirica]
gi|440550182|gb|AGC11593.1| Rab GTPase, partial [Larix sibirica]
gi|440550184|gb|AGC11594.1| Rab GTPase, partial [Larix sibirica]
gi|440550186|gb|AGC11595.1| Rab GTPase, partial [Larix sibirica]
gi|440550188|gb|AGC11596.1| Rab GTPase, partial [Larix sibirica]
gi|440550190|gb|AGC11597.1| Rab GTPase, partial [Larix sibirica]
gi|440550192|gb|AGC11598.1| Rab GTPase, partial [Larix sibirica]
gi|440550194|gb|AGC11599.1| Rab GTPase, partial [Larix sibirica]
gi|440550196|gb|AGC11600.1| Rab GTPase, partial [Larix sibirica]
gi|440550198|gb|AGC11601.1| Rab GTPase, partial [Larix sibirica]
gi|440550200|gb|AGC11602.1| Rab GTPase, partial [Larix sibirica]
gi|440550202|gb|AGC11603.1| Rab GTPase, partial [Larix sibirica]
gi|440550204|gb|AGC11604.1| Rab GTPase, partial [Larix sibirica]
gi|440550206|gb|AGC11605.1| Rab GTPase, partial [Larix sibirica]
gi|440550208|gb|AGC11606.1| Rab GTPase, partial [Larix sibirica]
gi|440550210|gb|AGC11607.1| Rab GTPase, partial [Larix sibirica]
gi|440550212|gb|AGC11608.1| Rab GTPase, partial [Larix sibirica]
gi|440550214|gb|AGC11609.1| Rab GTPase, partial [Larix sibirica]
gi|440550216|gb|AGC11610.1| Rab GTPase, partial [Larix sibirica]
gi|440550218|gb|AGC11611.1| Rab GTPase, partial [Larix sibirica]
gi|440550220|gb|AGC11612.1| Rab GTPase, partial [Larix sibirica]
gi|440550222|gb|AGC11613.1| Rab GTPase, partial [Larix sibirica]
gi|440550224|gb|AGC11614.1| Rab GTPase, partial [Larix sibirica]
gi|440550228|gb|AGC11616.1| Rab GTPase, partial [Larix sibirica]
gi|440550230|gb|AGC11617.1| Rab GTPase, partial [Larix sibirica]
gi|440550232|gb|AGC11618.1| Rab GTPase, partial [Larix sibirica]
gi|440550234|gb|AGC11619.1| Rab GTPase, partial [Larix sibirica]
gi|440550236|gb|AGC11620.1| Rab GTPase, partial [Larix sibirica]
gi|440550238|gb|AGC11621.1| Rab GTPase, partial [Larix sibirica]
gi|440550240|gb|AGC11622.1| Rab GTPase, partial [Larix sibirica]
gi|440550242|gb|AGC11623.1| Rab GTPase, partial [Larix sibirica]
gi|440550244|gb|AGC11624.1| Rab GTPase, partial [Larix sibirica]
gi|440550246|gb|AGC11625.1| Rab GTPase, partial [Larix sibirica]
gi|440550248|gb|AGC11626.1| Rab GTPase, partial [Larix sibirica]
gi|440550250|gb|AGC11627.1| Rab GTPase, partial [Larix sibirica]
gi|440550252|gb|AGC11628.1| Rab GTPase, partial [Larix sibirica]
gi|440550254|gb|AGC11629.1| Rab GTPase, partial [Larix sibirica]
gi|440550256|gb|AGC11630.1| Rab GTPase, partial [Larix sibirica]
gi|440550258|gb|AGC11631.1| Rab GTPase, partial [Larix sibirica]
gi|440550260|gb|AGC11632.1| Rab GTPase, partial [Larix sibirica]
gi|440550262|gb|AGC11633.1| Rab GTPase, partial [Larix sibirica]
gi|440550264|gb|AGC11634.1| Rab GTPase, partial [Larix sibirica]
gi|440550266|gb|AGC11635.1| Rab GTPase, partial [Larix sibirica]
gi|440550268|gb|AGC11636.1| Rab GTPase, partial [Larix sibirica]
gi|440550270|gb|AGC11637.1| Rab GTPase, partial [Larix sibirica]
gi|440550272|gb|AGC11638.1| Rab GTPase, partial [Larix sibirica]
gi|440550274|gb|AGC11639.1| Rab GTPase, partial [Larix sibirica]
gi|440550276|gb|AGC11640.1| Rab GTPase, partial [Larix sibirica]
gi|440550278|gb|AGC11641.1| Rab GTPase, partial [Larix sibirica]
gi|440550280|gb|AGC11642.1| Rab GTPase, partial [Larix sibirica]
gi|440550282|gb|AGC11643.1| Rab GTPase, partial [Larix sibirica]
gi|440550284|gb|AGC11644.1| Rab GTPase, partial [Larix sibirica]
gi|440550286|gb|AGC11645.1| Rab GTPase, partial [Larix sibirica]
gi|440550288|gb|AGC11646.1| Rab GTPase, partial [Larix sibirica]
gi|440550290|gb|AGC11647.1| Rab GTPase, partial [Larix sibirica]
gi|440550292|gb|AGC11648.1| Rab GTPase, partial [Larix sibirica]
gi|440550294|gb|AGC11649.1| Rab GTPase, partial [Larix sibirica]
gi|440550296|gb|AGC11650.1| Rab GTPase, partial [Larix occidentalis]
gi|440550298|gb|AGC11651.1| Rab GTPase, partial [Larix occidentalis]
gi|440550300|gb|AGC11652.1| Rab GTPase, partial [Larix occidentalis]
gi|440550302|gb|AGC11653.1| Rab GTPase, partial [Larix occidentalis]
gi|440550304|gb|AGC11654.1| Rab GTPase, partial [Larix occidentalis]
gi|440550306|gb|AGC11655.1| Rab GTPase, partial [Larix occidentalis]
gi|440550308|gb|AGC11656.1| Rab GTPase, partial [Larix occidentalis]
gi|440550310|gb|AGC11657.1| Rab GTPase, partial [Larix occidentalis]
gi|440550312|gb|AGC11658.1| Rab GTPase, partial [Larix occidentalis]
gi|440550314|gb|AGC11659.1| Rab GTPase, partial [Larix occidentalis]
gi|440550316|gb|AGC11660.1| Rab GTPase, partial [Larix occidentalis]
gi|440550318|gb|AGC11661.1| Rab GTPase, partial [Larix occidentalis]
gi|440550320|gb|AGC11662.1| Rab GTPase, partial [Larix occidentalis]
gi|440550322|gb|AGC11663.1| Rab GTPase, partial [Larix occidentalis]
gi|440550324|gb|AGC11664.1| Rab GTPase, partial [Larix occidentalis]
Length = 158
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 100/124 (80%), Positives = 111/124 (89%), Gaps = 2/124 (1%)
Query: 28 YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87
YVNKKFSNQYKATIGADFLTKEV+ EDRL T+QIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 1 YVNKKFSNQYKATIGADFLTKEVEVEDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV 60
Query: 88 YDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVCFGEEGSSMV 147
YDVN MKSFDNL+NWR+EFLIQA+P+DP+NFPFVVLGNK DVD G+SRVV E+ + M
Sbjct: 61 YDVNVMKSFDNLDNWRQEFLIQANPTDPENFPFVVLGNKTDVDDGHSRVV--SEKKAKMW 118
Query: 148 CLQR 151
C +
Sbjct: 119 CAAK 122
>gi|145546430|ref|XP_001458898.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834089|emb|CAI44446.1| rab_A30 [Paramecium tetraurelia]
gi|124426720|emb|CAK91501.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 92/128 (71%), Positives = 113/128 (88%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASKKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ + KSFD+L++WR+EFL+Q P DP++FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKID 128
VVLGNK+D
Sbjct: 121 VVLGNKLD 128
>gi|145487394|ref|XP_001429702.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834393|emb|CAI44533.1| rab_B30 [Paramecium tetraurelia]
gi|124396796|emb|CAK62304.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 211 bits (537), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 92/128 (71%), Positives = 113/128 (88%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASKKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ + KSFD+L++WR+EFL+Q P DP++FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKID 128
VVLGNK+D
Sbjct: 121 VVLGNKLD 128
>gi|254579991|ref|XP_002495981.1| ZYRO0C07700p [Zygosaccharomyces rouxii]
gi|238938872|emb|CAR27048.1| ZYRO0C07700p [Zygosaccharomyces rouxii]
Length = 207
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 94/136 (69%), Positives = 116/136 (85%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D++ T+Q
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDDKVATMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFL+ A+ P+ FPF
Sbjct: 61 VWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLVHANVLSPETFPF 120
Query: 121 VVLGNKIDVDGGNSRV 136
V+LGNK+DV+ V
Sbjct: 121 VILGNKVDVEESKKTV 136
>gi|34559282|gb|AAL08054.2| Rab7a protein [Paramecium octaurelia]
gi|53850820|gb|AAU95464.1| Rab7a protein [Paramecium octaurelia]
gi|210137241|gb|ACJ09042.1| Rab7a1 protein [Paramecium octaurelia]
Length = 206
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/128 (71%), Positives = 113/128 (88%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ + KSFD+L++WR+EFL+Q P DP++FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKID 128
VVLGNK+D
Sbjct: 121 VVLGNKLD 128
>gi|440550053|gb|AGC11529.1| Rab GTPase, partial [Larix sibirica]
gi|440550084|gb|AGC11544.1| Rab GTPase, partial [Larix sibirica]
gi|440550102|gb|AGC11553.1| Rab GTPase, partial [Larix sibirica]
Length = 158
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/124 (80%), Positives = 110/124 (88%), Gaps = 2/124 (1%)
Query: 28 YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87
YVNKKFSNQYKATIGADFLTKEV+ EDRL T QIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 1 YVNKKFSNQYKATIGADFLTKEVEVEDRLVTTQIWDTAGQERFQSLGVAFYRGADCCVLV 60
Query: 88 YDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVCFGEEGSSMV 147
YDVN MKSFDNL+NWR+EFLIQA+P+DP+NFPFVVLGNK DVD G+SRVV E+ + M
Sbjct: 61 YDVNVMKSFDNLDNWRQEFLIQANPTDPENFPFVVLGNKTDVDDGHSRVV--SEKKAKMW 118
Query: 148 CLQR 151
C +
Sbjct: 119 CAAK 122
>gi|49473687|gb|AAT66502.1| Rab7b protein [Paramecium octaurelia]
gi|58220836|gb|AAW68046.1| Rab7b protein [Paramecium octaurelia]
Length = 206
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/128 (71%), Positives = 113/128 (88%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ + KSFD+L++WR+EFL+Q P DP++FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKID 128
VVLGNK+D
Sbjct: 121 VVLGNKLD 128
>gi|440550226|gb|AGC11615.1| Rab GTPase, partial [Larix sibirica]
Length = 158
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/124 (79%), Positives = 111/124 (89%), Gaps = 2/124 (1%)
Query: 28 YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87
YVNKKFSNQYKATIGADFLTKEV+ EDRL T+QIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 1 YVNKKFSNQYKATIGADFLTKEVEVEDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV 60
Query: 88 YDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVCFGEEGSSMV 147
YDVN MKSF+NL+NWR+EFLIQA+P+DP+NFPFVVLGNK DVD G+SRVV E+ + M
Sbjct: 61 YDVNVMKSFNNLDNWRQEFLIQANPTDPENFPFVVLGNKTDVDDGHSRVV--SEKKAKMW 118
Query: 148 CLQR 151
C +
Sbjct: 119 CAAK 122
>gi|410081708|ref|XP_003958433.1| hypothetical protein KAFR_0G02670 [Kazachstania africana CBS 2517]
gi|372465021|emb|CCF59298.1| hypothetical protein KAFR_0G02670 [Kazachstania africana CBS 2517]
Length = 208
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 117/131 (89%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M S+++T+LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKE+ + DR T+
Sbjct: 1 MSSKKKTILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEINVDGDRTATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFL+ A+ S P++FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNTKSFENIKSWRDEFLVHANVSSPESFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNKID++
Sbjct: 121 FVILGNKIDIE 131
>gi|365985618|ref|XP_003669641.1| hypothetical protein NDAI_0D00840 [Naumovozyma dairenensis CBS 421]
gi|343768410|emb|CCD24398.1| hypothetical protein NDAI_0D00840 [Naumovozyma dairenensis CBS 421]
Length = 208
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 116/131 (88%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D ++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTIDDDKIATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFLI A+ S P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLIHANISTPETFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNKIDV+
Sbjct: 121 FVILGNKIDVE 131
>gi|255712835|ref|XP_002552700.1| KLTH0C11132p [Lachancea thermotolerans]
gi|238934079|emb|CAR22262.1| KLTH0C11132p [Lachancea thermotolerans CBS 6340]
Length = 208
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 95/131 (72%), Positives = 116/131 (88%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN KFS QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKFSQQYKATIGADFLTKEVTMDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFL+ A+ S P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLVHANVSSPETFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNK+DV+
Sbjct: 121 FVILGNKLDVE 131
>gi|440550063|gb|AGC11534.1| Rab GTPase, partial [Larix sibirica]
Length = 158
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/124 (79%), Positives = 109/124 (87%), Gaps = 2/124 (1%)
Query: 28 YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLV 87
YV KKFSNQYKATIGADFLTKEV+ EDRL T QIWDTAGQERFQSLGVAFYRGADCCVLV
Sbjct: 1 YVTKKFSNQYKATIGADFLTKEVEVEDRLVTTQIWDTAGQERFQSLGVAFYRGADCCVLV 60
Query: 88 YDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVCFGEEGSSMV 147
YDVN MKSFDNL+NWR+EFLIQA+P+DP+NFPFVVLGNK DVD G+SRVV E+ + M
Sbjct: 61 YDVNVMKSFDNLDNWRQEFLIQANPTDPENFPFVVLGNKTDVDDGHSRVV--SEKKAKMW 118
Query: 148 CLQR 151
C +
Sbjct: 119 CAAK 122
>gi|367017049|ref|XP_003683023.1| hypothetical protein TDEL_0G04450 [Torulaspora delbrueckii]
gi|359750686|emb|CCE93812.1| hypothetical protein TDEL_0G04450 [Torulaspora delbrueckii]
Length = 208
Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 95/131 (72%), Positives = 117/131 (89%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D ++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVVLDDDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV ++KSF+N+ +WR+EFL+ A+ S P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNVKSFENIKSWRDEFLVHANVSSPETFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNKIDV+
Sbjct: 121 FVILGNKIDVE 131
>gi|367005122|ref|XP_003687293.1| hypothetical protein TPHA_0J00360 [Tetrapisispora phaffii CBS 4417]
gi|357525597|emb|CCE64859.1| hypothetical protein TPHA_0J00360 [Tetrapisispora phaffii CBS 4417]
Length = 209
Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/138 (69%), Positives = 117/138 (84%), Gaps = 2/138 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED--RLFT 58
M SR++ LLKVI+LGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D + T
Sbjct: 1 MSSRKKNLLKVIVLGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVVIDDGSQAAT 60
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNF 118
+Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSFDN+ +WR+EFLI A+ S P+ F
Sbjct: 61 MQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNPKSFDNIKSWRDEFLIHANVSSPETF 120
Query: 119 PFVVLGNKIDVDGGNSRV 136
PFV+LGNKID++ ++
Sbjct: 121 PFVILGNKIDIEDSKQKI 138
>gi|328875514|gb|EGG23878.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 293
Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/119 (82%), Positives = 109/119 (91%), Gaps = 2/119 (1%)
Query: 19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFY 78
VGKTSLMNQYVNKKFSNQYKATIGADFLTKE+ +DR+ T+QIWDTAGQERFQSLGVAFY
Sbjct: 108 VGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWDTAGQERFQSLGVAFY 167
Query: 79 RGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVV 137
RGADCCVLVYDVN K+F+NL++WR+EFLIQA P DPDNFPFVVLGNKID++ N RVV
Sbjct: 168 RGADCCVLVYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDLE--NQRVV 224
>gi|260950047|ref|XP_002619320.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238846892|gb|EEQ36356.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 214
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 116/130 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTK++ +++ +LQ
Sbjct: 1 MSARKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKDLTIDNKTVSLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDV + KS +NL +W++EFLIQ++ S+P +FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLIQSNVSNPQDFPF 120
Query: 121 VVLGNKIDVD 130
+++GNKIDVD
Sbjct: 121 IIIGNKIDVD 130
>gi|156844455|ref|XP_001645290.1| hypothetical protein Kpol_1037p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156115950|gb|EDO17432.1| hypothetical protein Kpol_1037p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 208
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 95/131 (72%), Positives = 115/131 (87%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++ +LKVI+LGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D + T+
Sbjct: 1 MSSRKKNILKVIVLGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDDDKAATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFLI A+ S P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNSKSFENIKSWRDEFLIHANVSSPETFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNKIDV+
Sbjct: 121 FVILGNKIDVE 131
>gi|403218485|emb|CCK72975.1| hypothetical protein KNAG_0M01220 [Kazachstania naganishii CBS
8797]
Length = 207
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 114/130 (87%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D++ T+Q
Sbjct: 1 MSFRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDDKVATMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ W++EFL+ A+ S P+ FPF
Sbjct: 61 VWDTAGQERFQSLGVAFYRGADCCVLVYDVTNNKSFENIKTWKDEFLVHANVSSPETFPF 120
Query: 121 VVLGNKIDVD 130
V+LGNK+DV+
Sbjct: 121 VILGNKVDVE 130
>gi|302662118|ref|XP_003022718.1| hypothetical protein TRV_03179 [Trichophyton verrucosum HKI 0517]
gi|291186678|gb|EFE42100.1| hypothetical protein TRV_03179 [Trichophyton verrucosum HKI 0517]
Length = 316
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/122 (79%), Positives = 112/122 (91%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
++VIILGDSGVGKTSLMNQYVNKK+S YKATIGAD+LTKEV + RL T+QIWDTAGQE
Sbjct: 120 IQVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVMVDGRLVTMQIWDTAGQE 179
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQA+ DP++FPFVVLGNKID
Sbjct: 180 RFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQANLRDPESFPFVVLGNKID 239
Query: 129 VD 130
V+
Sbjct: 240 VE 241
>gi|399218383|emb|CCF75270.1| unnamed protein product [Babesia microti strain RI]
Length = 210
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/124 (75%), Positives = 109/124 (87%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+R +LK +ILGDSGVGKTSLMNQYVNKKFSNQY+ATIGADFL+KE +++ TLQIWDT
Sbjct: 3 QRAMLKTVILGDSGVGKTSLMNQYVNKKFSNQYRATIGADFLSKETVVDNKQITLQIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERFQSLGVAFYRGAD C+LVYD S+KSF+N++NW++EFL QA P DPD FPFV+LG
Sbjct: 63 AGQERFQSLGVAFYRGADSCILVYDTTSLKSFENIDNWKKEFLEQAEPKDPDTFPFVLLG 122
Query: 125 NKID 128
NK D
Sbjct: 123 NKAD 126
>gi|45185690|ref|NP_983406.1| ACR003Cp [Ashbya gossypii ATCC 10895]
gi|44981445|gb|AAS51230.1| ACR003Cp [Ashbya gossypii ATCC 10895]
gi|374106612|gb|AEY95521.1| FACR003Cp [Ashbya gossypii FDAG1]
Length = 208
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 116/131 (88%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFL+ A+ P++FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENVKSWRDEFLVHANVPSPESFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNKIDV+
Sbjct: 121 FVILGNKIDVE 131
>gi|50286745|ref|XP_445802.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525108|emb|CAG58721.1| unnamed protein product [Candida glabrata]
Length = 208
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 117/131 (89%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M +R++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D ++ T+
Sbjct: 1 MIARKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVVLDDDKVVTM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +W++EFL+ A+ S P++FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWKDEFLVHANISSPESFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNK+D++
Sbjct: 121 FVILGNKVDIE 131
>gi|363750286|ref|XP_003645360.1| hypothetical protein Ecym_3028 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888994|gb|AET38543.1| Hypothetical protein Ecym_3028 [Eremothecium cymbalariae
DBVPG#7215]
Length = 208
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 114/131 (87%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ WR+EFL+ A+ P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNSKSFENIKAWRDEFLVHANVPSPETFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNKIDV+
Sbjct: 121 FVILGNKIDVE 131
>gi|190348567|gb|EDK41039.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/131 (72%), Positives = 115/131 (87%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TL
Sbjct: 1 MSSRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITVDNNKQVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL YDV + KS +NL +W++EFLIQ++ S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLIQSNVSNPQDFP 120
Query: 120 FVVLGNKIDVD 130
F+++GNKID D
Sbjct: 121 FIIIGNKIDAD 131
>gi|294656310|ref|XP_002770249.1| DEHA2D02420p [Debaryomyces hansenii CBS767]
gi|199431371|emb|CAR65608.1| DEHA2D02420p [Debaryomyces hansenii CBS767]
Length = 215
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/131 (72%), Positives = 116/131 (88%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M R++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TL
Sbjct: 1 MSGRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITIDNNKQVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL YDV + KS +NL++W++EFLIQ++ S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLSSWKDEFLIQSNVSNPQDFP 120
Query: 120 FVVLGNKIDVD 130
F+++GNKIDVD
Sbjct: 121 FIIIGNKIDVD 131
>gi|21465930|pdb|1KY2|A Chain A, Gppnhp-Bound Ypt7p At 1.6 A Resolution
gi|21465931|pdb|1KY3|A Chain A, Gdp-Bound Ypt7p At 1.35 A Resolution
Length = 182
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 114/131 (87%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNKID +
Sbjct: 121 FVILGNKIDAE 131
>gi|126135226|ref|XP_001384137.1| hypothetical protein PICST_67584 [Scheffersomyces stipitis CBS
6054]
gi|126091335|gb|ABN66108.1| Gtp-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 215
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 115/131 (87%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M R++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ + ++ TL
Sbjct: 1 MSGRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEISIDGNKQVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL YDV + KS +NL +W++EFL+Q++ S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFP 120
Query: 120 FVVLGNKIDVD 130
F+++GNKIDVD
Sbjct: 121 FIIIGNKIDVD 131
>gi|194390946|dbj|BAG60591.1| unnamed protein product [Homo sapiens]
Length = 193
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/117 (81%), Positives = 106/117 (90%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
IWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP+N
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN 117
>gi|254574478|ref|XP_002494348.1| GTP-binding protein [Komagataella pastoris GS115]
gi|238034147|emb|CAY72169.1| GTP-binding protein [Komagataella pastoris GS115]
gi|328353835|emb|CCA40232.1| Ras-related protein Rab-7A [Komagataella pastoris CBS 7435]
Length = 205
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 91/136 (66%), Positives = 119/136 (87%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++T+LKVIILGDSGVGKTSLM Q+VN+KFS QYKATIGADFLTKE+ +++ T+Q
Sbjct: 1 MSSKKKTILKVIILGDSGVGKTSLMQQFVNRKFSQQYKATIGADFLTKELVIDNKNVTIQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KS+DN+ +W++EFL+QA+ +P+ FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVTNNKSYDNVVSWKDEFLVQANIKNPETFPF 120
Query: 121 VVLGNKIDVDGGNSRV 136
+++GNKIDV+ ++
Sbjct: 121 ILIGNKIDVEENKRQI 136
>gi|340501803|gb|EGR28543.1| rab gtpase, putative [Ichthyophthirius multifiliis]
Length = 209
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 108/126 (85%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
++R+ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQIW
Sbjct: 4 TKRKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGADCCVLVYD+ + KSF++L +W+EEF Q P DPDNFPFVV
Sbjct: 64 DTAGQERFQSLGGAFYRGADCCVLVYDITNKKSFESLESWKEEFKQQGQPKDPDNFPFVV 123
Query: 123 LGNKID 128
LGNK D
Sbjct: 124 LGNKCD 129
>gi|6323642|ref|NP_013713.1| Ypt7p [Saccharomyces cerevisiae S288c]
gi|418594|sp|P32939.1|YPT7_YEAST RecName: Full=GTP-binding protein YPT7
gi|5519|emb|CAA48244.1| GTP-binding protein (Ypt7p) [Saccharomyces cerevisiae]
gi|728647|emb|CAA88515.1| Ypt7p [Saccharomyces cerevisiae]
gi|1171484|dbj|BAA10973.1| small GTP binding protein [Saccharomyces cerevisiae]
gi|151946160|gb|EDN64391.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190408238|gb|EDV11503.1| GTP-binding protein YPT7 [Saccharomyces cerevisiae RM11-1a]
gi|256273536|gb|EEU08470.1| Ypt7p [Saccharomyces cerevisiae JAY291]
gi|259148577|emb|CAY81822.1| Ypt7p [Saccharomyces cerevisiae EC1118]
gi|285814003|tpg|DAA09898.1| TPA: Ypt7p [Saccharomyces cerevisiae S288c]
gi|323336222|gb|EGA77493.1| Ypt7p [Saccharomyces cerevisiae Vin13]
gi|323353008|gb|EGA85308.1| Ypt7p [Saccharomyces cerevisiae VL3]
gi|349580284|dbj|GAA25444.1| K7_Ypt7p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763733|gb|EHN05259.1| Ypt7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 208
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 114/131 (87%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNKID +
Sbjct: 121 FVILGNKIDAE 131
>gi|167378043|ref|XP_001734647.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903767|gb|EDR29200.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 94/135 (69%), Positives = 113/135 (83%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+++ LLKVIILGDSGVGKTSLMNQ+VN K+S+ YKATIGADFLTK++ ++ T+QIW
Sbjct: 2 SKKKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAG ERFQSLGVAFYRGADCC L YDVN K+F++LNNWREEFL+QASP + D FPFVV
Sbjct: 62 DTAGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVV 121
Query: 123 LGNKIDVDGGNSRVV 137
LGNK+D G+ +
Sbjct: 122 LGNKVDTYEGSPDAI 136
>gi|401624365|gb|EJS42425.1| ypt7p [Saccharomyces arboricola H-6]
Length = 208
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 114/131 (87%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNKID +
Sbjct: 121 FVILGNKIDAE 131
>gi|365759109|gb|EHN00920.1| Ypt7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841460|gb|EJT43846.1| YPT7-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 208
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 114/131 (87%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNKID +
Sbjct: 121 FVILGNKIDAE 131
>gi|67466081|ref|XP_649196.1| small GTPase Rab7A [Entamoeba histolytica HM-1:IMSS]
gi|13537439|dbj|BAB40674.1| small GTPase Rab7A [Entamoeba histolytica]
gi|56465573|gb|EAL43810.1| small GTPase Rab7A [Entamoeba histolytica HM-1:IMSS]
gi|407041686|gb|EKE40891.1| small GTPase Rab7A, putative [Entamoeba nuttalli P19]
gi|449704349|gb|EMD44609.1| small GTPase Rab7A, putative [Entamoeba histolytica KU27]
Length = 206
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 94/135 (69%), Positives = 113/135 (83%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+++ LLKVIILGDSGVGKTSLMNQ+VN K+S+ YKATIGADFLTK++ ++ T+QIW
Sbjct: 2 SKKKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAG ERFQSLGVAFYRGADCC L YDVN K+F++LNNWREEFL+QASP + D FPFVV
Sbjct: 62 DTAGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVV 121
Query: 123 LGNKIDVDGGNSRVV 137
LGNK+D G+ +
Sbjct: 122 LGNKVDTYEGSPDAI 136
>gi|428672346|gb|EKX73260.1| Ras-related protein Rab7 small GTP-binging protein [Babesia equi]
Length = 215
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/134 (67%), Positives = 115/134 (85%), Gaps = 1/134 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R+R +LK+IILGDSGVGKTSLMNQ++NKKF+NQY+ATIGADFLT+E+ +D+ TLQIW
Sbjct: 2 ARKRPILKIIILGDSGVGKTSLMNQFINKKFTNQYRATIGADFLTQEMTVDDKEVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGADCC+LVYD + K+F+++ +W+ EFLIQ P DPD+FPF +
Sbjct: 62 DTAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESVESWKSEFLIQVEPKDPDSFPFAL 121
Query: 123 LGNKIDVDGGNSRV 136
+GNKID D N +V
Sbjct: 122 IGNKID-DTANRKV 134
>gi|449491740|ref|XP_004158990.1| PREDICTED: ras-related protein RABG3d-like isoform 2 [Cucumis
sativus]
Length = 182
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/137 (77%), Positives = 108/137 (78%), Gaps = 24/137 (17%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMN NQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRILLKVIILGDSGVGKTSLMNH-------NQYKATIGADFLTKEVQLDDRLFTLQ 53
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQ
Sbjct: 54 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQ----------- 102
Query: 121 VVLGNKIDVDGGNSRVV 137
+DVDGGNSRVV
Sbjct: 103 ------VDVDGGNSRVV 113
>gi|449448034|ref|XP_004141771.1| PREDICTED: ras-related protein RABG3d-like isoform 2 [Cucumis
sativus]
Length = 182
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/137 (77%), Positives = 108/137 (78%), Gaps = 24/137 (17%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMN NQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRILLKVIILGDSGVGKTSLMNH-------NQYKATIGADFLTKEVQLDDRLFTLQ 53
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQ
Sbjct: 54 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQ----------- 102
Query: 121 VVLGNKIDVDGGNSRVV 137
+DVDGGNSRVV
Sbjct: 103 ------VDVDGGNSRVV 113
>gi|50306305|ref|XP_453125.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642259|emb|CAH00221.1| KLLA0D01265p [Kluyveromyces lactis]
Length = 207
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 114/129 (88%), Gaps = 1/129 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-EDRLFTLQI 61
SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV +D++ T+Q+
Sbjct: 2 SRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVIVNDDKVATMQV 61
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSFDN+ +WR+EFL+ A+ S P+ FPFV
Sbjct: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVTNGKSFDNVKSWRDEFLVHANVSSPETFPFV 121
Query: 122 VLGNKIDVD 130
+L NK+DV+
Sbjct: 122 ILANKVDVE 130
>gi|224093888|ref|XP_002310036.1| predicted protein [Populus trichocarpa]
gi|222852939|gb|EEE90486.1| predicted protein [Populus trichocarpa]
Length = 194
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 108/127 (85%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
RR LLKVI+LGDSGVGKTSLMNQYV K+S Q KATIGADF+TKE+Q +D+L TLQIW+T
Sbjct: 1 RRALLKVIVLGDSGVGKTSLMNQYVYNKYSQQSKATIGADFVTKELQIDDKLVTLQIWNT 60
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERFQSLG AFYRGADCCVL YDVN KSF+ LNNW EEFL Q +DP FPF++LG
Sbjct: 61 AGQERFQSLGPAFYRGADCCVLEYDVNVQKSFETLNNWHEEFLKQTDFNDPHAFPFILLG 120
Query: 125 NKIDVDG 131
NKID+DG
Sbjct: 121 NKIDLDG 127
>gi|344302658|gb|EGW32932.1| hypothetical protein SPAPADRAFT_60274 [Spathaspora passalidarum
NRRL Y-27907]
Length = 215
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 116/131 (88%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TL
Sbjct: 1 MSSRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEIIIDNNKPVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFP 120
Query: 120 FVVLGNKIDVD 130
F+++GNKIDVD
Sbjct: 121 FIIIGNKIDVD 131
>gi|294894152|ref|XP_002774747.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239880304|gb|EER06563.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 122
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/117 (79%), Positives = 107/117 (91%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFS QYKATIGADFLTKEV +D++ TLQIWD
Sbjct: 6 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTIDDKVVTLQIWD 65
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
TAGQERFQSLG+AFYRGADCC LVYD+ + KSF++L++WR+EFLIQASP DP+ FPF
Sbjct: 66 TAGQERFQSLGMAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDPEEFPF 122
>gi|323303622|gb|EGA57411.1| Ypt7p [Saccharomyces cerevisiae FostersB]
Length = 146
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 114/131 (87%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 120 FVVLGNKIDVD 130
FV+LGNKID +
Sbjct: 121 FVILGNKIDAE 131
>gi|444314739|ref|XP_004178027.1| hypothetical protein TBLA_0A07180 [Tetrapisispora blattae CBS 6284]
gi|387511066|emb|CCH58508.1| hypothetical protein TBLA_0A07180 [Tetrapisispora blattae CBS 6284]
Length = 208
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/138 (68%), Positives = 113/138 (81%), Gaps = 1/138 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M +R++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D T+
Sbjct: 1 MSTRKKQILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVAIDNDTTATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + KSF+N+ +WR+EFLI A+ S P+ FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNPKSFENIKSWRDEFLIHANVSSPETFP 120
Query: 120 FVVLGNKIDVDGGNSRVV 137
FV+LGNK+D V
Sbjct: 121 FVILGNKVDTKDSKKSVT 138
>gi|238883588|gb|EEQ47226.1| GTP-binding protein YPT7 [Candida albicans WO-1]
Length = 217
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 115/129 (89%), Gaps = 1/129 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQI 61
SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TLQI
Sbjct: 5 SRKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSVTLQI 64
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FPF+
Sbjct: 65 WDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFI 124
Query: 122 VLGNKIDVD 130
++GNKIDVD
Sbjct: 125 IIGNKIDVD 133
>gi|440793724|gb|ELR14900.1| Rab7/RabGfamily small GTPase [Acanthamoeba castellanii str. Neff]
Length = 205
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/126 (73%), Positives = 113/126 (89%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
++RR LLKVI+LGDSGVGKTSLM++YVNKK+S QYKATIGADFLTKEV+ + +L TLQIW
Sbjct: 2 AQRRALLKVILLGDSGVGKTSLMDRYVNKKYSAQYKATIGADFLTKEVEVDGKLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG +FYRGADCC+LV+DV KSF++L+NWR EFL+QA+ P++FPFVV
Sbjct: 62 DTAGQERFQSLGNSFYRGADCCILVFDVTVAKSFESLDNWRNEFLVQAAVGGPEHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|149239963|ref|XP_001525857.1| GTP-binding protein ypt7 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449980|gb|EDK44236.1| GTP-binding protein ypt7 [Lodderomyces elongisporus NRRL YB-4239]
Length = 214
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 114/131 (87%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++TLLKVIILGDSGVGKTSLM Q+VN KFS QYKATIGADFLTKE+ ++ + TL
Sbjct: 1 MSSRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSQQYKATIGADFLTKEIPIDNNKSVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q + S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQLNVSNPQDFP 120
Query: 120 FVVLGNKIDVD 130
F+++GNKIDVD
Sbjct: 121 FIIIGNKIDVD 131
>gi|440301863|gb|ELP94249.1| hypothetical protein EIN_186960 [Entamoeba invadens IP1]
Length = 205
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/126 (73%), Positives = 110/126 (87%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+++ LLKVIILGDSGVGKTSLMNQ+VN K+S+ YKATIGADFLTK++ ++ T+QIW
Sbjct: 2 SKKKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAG ERFQSLGVAFYRGADCC LV+DVN K+FD+LNNWR+EFL+QA P + D FPFVV
Sbjct: 62 DTAGNERFQSLGVAFYRGADCCALVHDVNDPKTFDSLNNWRDEFLVQAQPKNTDQFPFVV 121
Query: 123 LGNKID 128
LGNKID
Sbjct: 122 LGNKID 127
>gi|448097583|ref|XP_004198710.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|448101433|ref|XP_004199559.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|359380132|emb|CCE82373.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|359380981|emb|CCE81440.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
Length = 214
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/131 (70%), Positives = 116/131 (88%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M R++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TL
Sbjct: 1 MSGRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEISIDNNKQVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL++W++EFL+Q++ S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLSSWKDEFLVQSNVSNPQDFP 120
Query: 120 FVVLGNKIDVD 130
F+++GNKIDVD
Sbjct: 121 FIIIGNKIDVD 131
>gi|241951752|ref|XP_002418598.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|223641937|emb|CAX43901.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 115/129 (89%), Gaps = 1/129 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQI 61
SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TLQI
Sbjct: 4 SRKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITIDNNKSVTLQI 63
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FPF+
Sbjct: 64 WDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFI 123
Query: 122 VLGNKIDVD 130
++GNKIDVD
Sbjct: 124 IIGNKIDVD 132
>gi|68482406|ref|XP_714835.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46436432|gb|EAK95794.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 217
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 115/129 (89%), Gaps = 1/129 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQI 61
SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TLQI
Sbjct: 5 SRKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSVTLQI 64
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FPF+
Sbjct: 65 WDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFI 124
Query: 122 VLGNKIDVD 130
++GNKIDVD
Sbjct: 125 IIGNKIDVD 133
>gi|344234626|gb|EGV66494.1| hypothetical protein CANTEDRAFT_101058 [Candida tenuis ATCC 10573]
Length = 215
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/131 (70%), Positives = 115/131 (87%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M R++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTK++ ++ + TL
Sbjct: 1 MSGRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKDITLDNNKQVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL YDV + KS +NL +W++EFL+Q++ S+P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLVQSNVSNPQDFP 120
Query: 120 FVVLGNKIDVD 130
F+++GNKIDVD
Sbjct: 121 FIIIGNKIDVD 131
>gi|222619160|gb|EEE55292.1| hypothetical protein OsJ_03242 [Oryza sativa Japonica Group]
Length = 538
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 92/111 (82%), Positives = 99/111 (89%)
Query: 27 QYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVL 86
+YV+KKFS QYKATIGADF+TKEV EDRL TLQIWDTAGQERFQSLGVAFYRGADCCVL
Sbjct: 380 RYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVL 439
Query: 87 VYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVV 137
VYDVNS +SFD LN W +EFL QASPSDP FPF++LGNKIDVDGG SRVV
Sbjct: 440 VYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFILLGNKIDVDGGKSRVV 490
>gi|146414423|ref|XP_001483182.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 114/131 (87%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTL 59
M SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + TL
Sbjct: 1 MSSRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITVDNNKQVTL 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVL YDV + KS +NL +W++EFLIQ++ +P +FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLIQSNVLNPQDFP 120
Query: 120 FVVLGNKIDVD 130
F+++GNKID D
Sbjct: 121 FIIIGNKIDAD 131
>gi|85001291|ref|XP_955364.1| Ras-related gtpase [Theileria annulata strain Ankara]
gi|65303510|emb|CAI75888.1| Ras-related gtpase, putative [Theileria annulata]
Length = 215
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 116/136 (85%), Gaps = 2/136 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP RR+++LK+IILGDSGVGKTSLMNQ++NK+F+NQY+ATIGADFLT E+ +D+ TLQ
Sbjct: 1 MP-RRKSILKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFLTMEMTVDDKEVTLQ 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCC+LVYD + K+F+++ +W+ EFLIQ P DPD+FPF
Sbjct: 60 IWDTAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVDPKDPDSFPF 119
Query: 121 VVLGNKIDVDGGNSRV 136
++GNKID D N +V
Sbjct: 120 ALIGNKID-DVENKKV 134
>gi|403222812|dbj|BAM40943.1| Ras-related GTPase [Theileria orientalis strain Shintoku]
Length = 215
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 116/136 (85%), Gaps = 2/136 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP RR+++LK+IILGDSGVGKTSLMNQ++NK+F+NQY+ATIGADFLT E+ +D+ TLQ
Sbjct: 1 MP-RRKSILKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFLTMEMTVDDKEVTLQ 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGADCC+LVYD + K+F+++ +W+ EFLIQ P DPD+FPF
Sbjct: 60 IWDTAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVDPKDPDSFPF 119
Query: 121 VVLGNKIDVDGGNSRV 136
++GNKID D N +V
Sbjct: 120 ALVGNKID-DVENKKV 134
>gi|156087801|ref|XP_001611307.1| Rab7 [Babesia bovis]
gi|154798561|gb|EDO07739.1| Rab7 [Babesia bovis]
Length = 233
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 88/134 (65%), Positives = 115/134 (85%), Gaps = 1/134 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R+R +LK+IILGDSGVGKTSLMNQ++NK+F+NQY+ATIGADF T+EV +D++ TLQIW
Sbjct: 20 ARKRPILKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFSTQEVTVDDKVVTLQIW 79
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGADCC+LVYD + K+F+++ +W+ EFLIQ P DP++FPF +
Sbjct: 80 DTAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVEPKDPESFPFAL 139
Query: 123 LGNKIDVDGGNSRV 136
+GNK+D D N +V
Sbjct: 140 IGNKVD-DVANRKV 152
>gi|6942102|gb|AAF32317.1|AF218311_1 Rab7-like GTPase [Entamoeba histolytica]
Length = 206
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 93/133 (69%), Positives = 111/133 (83%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
++ LLKVIILGDSGVGKTSLMNQ+VN K+S+ YKATIGADFLTK++ ++ T+QIWDT
Sbjct: 4 KKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG ERFQSLGVAFYRGADCC L YDVN K+F++LNNWREEFL+QASP + D FPFVVLG
Sbjct: 64 AGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVVLG 123
Query: 125 NKIDVDGGNSRVV 137
NK+D G+ +
Sbjct: 124 NKVDTYEGSPDAI 136
>gi|2350954|dbj|BAA22004.1| Ras-related protein RAB7 [Entamoeba histolytica]
Length = 169
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 93/134 (69%), Positives = 112/134 (83%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+++ LLKVIILGDSGVGKTSLMNQ+VN K+S+ YKATIGADFLTK++ ++ T+QIWD
Sbjct: 1 KKKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWD 60
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAG ERFQSLGVAFYRGADCC L YDVN K+F++LNNWREEFL+QASP + D FPFVVL
Sbjct: 61 TAGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVVL 120
Query: 124 GNKIDVDGGNSRVV 137
GNK+D G+ +
Sbjct: 121 GNKVDTYEGSPDAI 134
>gi|32492056|gb|AAP85300.1| Rab7 [Babesia bovis]
Length = 215
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 88/134 (65%), Positives = 115/134 (85%), Gaps = 1/134 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+R+R +LK+IILGDSGVGKTSLMNQ++NK+F+NQY+ATIGADF T+EV +D++ TLQIW
Sbjct: 2 ARKRPILKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFSTQEVTVDDKVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGADCC+LVYD + K+F+++ +W+ EFLIQ P DP++FPF +
Sbjct: 62 DTAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVEPKDPESFPFAL 121
Query: 123 LGNKIDVDGGNSRV 136
+GNK+D D N +V
Sbjct: 122 IGNKVD-DVANRKV 134
>gi|402887163|ref|XP_003906974.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-7a [Papio
anubis]
Length = 287
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 92/112 (82%), Positives = 103/112 (91%)
Query: 19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFY 78
VGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+QIWDTAGQERFQSLGVAFY
Sbjct: 99 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFY 158
Query: 79 RGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
RGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPFVVLGNKID++
Sbjct: 159 RGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE 210
>gi|229595003|ref|XP_001032971.3| Ras family protein [Tetrahymena thermophila]
gi|6682935|dbj|BAA88954.1| Rab7 [Tetrahymena thermophila]
gi|225566446|gb|EAR85308.3| Ras family protein [Tetrahymena thermophila SB210]
Length = 209
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 89/126 (70%), Positives = 108/126 (85%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
++R+ L K+IILGDSGVGKTSLMNQYVN++F+ QY+AT+GADF+ KEV +DR+ TLQIW
Sbjct: 4 NKRKQLYKIIILGDSGVGKTSLMNQYVNQRFTQQYRATVGADFMAKEVTIDDRMVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGADCCVLVYD+ + K+F+NL +W+EEF Q P DPD FPFVV
Sbjct: 64 DTAGQERFQSLGGAFYRGADCCVLVYDITNKKTFENLESWKEEFKQQGCPKDPDTFPFVV 123
Query: 123 LGNKID 128
+GNK D
Sbjct: 124 IGNKSD 129
>gi|255725294|ref|XP_002547576.1| GTP-binding protein YPT7 [Candida tropicalis MYA-3404]
gi|240135467|gb|EER35021.1| GTP-binding protein YPT7 [Candida tropicalis MYA-3404]
Length = 216
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/129 (71%), Positives = 114/129 (88%), Gaps = 1/129 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQI 61
SR++TLLKVIILGDSGVGKTSLM Q+VN KFS+QYKATIGADFLTKE+ ++ + LQI
Sbjct: 4 SRKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITIDNNKQVALQI 63
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FPF+
Sbjct: 64 WDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFI 123
Query: 122 VLGNKIDVD 130
++GNKIDVD
Sbjct: 124 IIGNKIDVD 132
>gi|290981522|ref|XP_002673479.1| rab family small GTPase [Naegleria gruberi]
gi|284087063|gb|EFC40735.1| rab family small GTPase [Naegleria gruberi]
Length = 204
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 111/126 (88%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
++ LLKVI+LGDS VGKTSLMNQ+V+KKFS QYKATIGADFLTKEV ED++ +L IWDT
Sbjct: 3 KKELLKVIVLGDSSVGKTSLMNQFVSKKFSTQYKATIGADFLTKEVMIEDKMCSLSIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF SLG AF+RG+D CVLV+D+ K+F+N+NNWR+EFL+Q +P DPDNFPFV++G
Sbjct: 63 AGQERFHSLGFAFFRGSDACVLVFDITVPKTFENVNNWRDEFLMQTTPEDPDNFPFVLIG 122
Query: 125 NKIDVD 130
NK+D++
Sbjct: 123 NKVDME 128
>gi|299741328|ref|XP_001834386.2| GTP-binding protein ypt7 [Coprinopsis cinerea okayama7#130]
gi|298404664|gb|EAU87363.2| GTP-binding protein ypt7 [Coprinopsis cinerea okayama7#130]
Length = 213
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 110/145 (75%), Gaps = 20/145 (13%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP R LLKVIILGDSGVGKTSLMNQYVNK+FS QYKATIGADFLTKEV E+R T+Q
Sbjct: 1 MP--RSALLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVDTEERPVTMQ 58
Query: 61 IWDT------------------AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNW 102
T AGQERFQSLGVAFYRGADCCVLV+DVNS KSF L +W
Sbjct: 59 QQPTHTTSSLALSLTLHFATSIAGQERFQSLGVAFYRGADCCVLVFDVNSAKSFQALESW 118
Query: 103 REEFLIQASPSDPDNFPFVVLGNKI 127
R+EFLIQASP DP+NFPFVVLGNK+
Sbjct: 119 RDEFLIQASPHDPENFPFVVLGNKV 143
>gi|281347008|gb|EFB22592.1| hypothetical protein PANDA_006030 [Ailuropoda melanoleuca]
gi|355714971|gb|AES05181.1| RAB7A, member RAS oncoprotein family [Mustela putorius furo]
Length = 189
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/113 (81%), Positives = 103/113 (91%)
Query: 19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFY 78
VGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +DRL T+QIWDTAGQERFQSLGVAFY
Sbjct: 1 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFY 60
Query: 79 RGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDG 131
RGADCCVLV+DV + +F L++WR+EFLIQASP DP+NFPFVVLGNKID++
Sbjct: 61 RGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN 113
>gi|344313253|gb|AEN04486.1| putative ras-related protein Rab-7, partial [Plutella xylostella]
Length = 193
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/115 (79%), Positives = 106/115 (92%)
Query: 16 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGV 75
DSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKEV +DR+ T+QIWDTAGQERFQSLGV
Sbjct: 1 DSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGV 60
Query: 76 AFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
AFYRGADCCVLV+DV + +F +L +WR+EFLIQASP DP+NFPFV+LGNK+D++
Sbjct: 61 AFYRGADCCVLVFDVTAPVTFKSLESWRDEFLIQASPRDPENFPFVILGNKVDLE 115
>gi|186502145|ref|NP_001118357.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
gi|330252140|gb|AEC07234.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
Length = 204
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/134 (70%), Positives = 111/134 (82%), Gaps = 8/134 (5%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+ RTLLKVI+LGDSGVGKTSLMNQYV KKF+ QYKATIGADF+TKE+ +++ TLQ
Sbjct: 5 KNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQ--- 61
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
RFQSLG AFYRGADCCVLVYDVN++KSF+ LNNW EFL QA+P +P+ FPFV++
Sbjct: 62 -----RFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLI 116
Query: 124 GNKIDVDGGNSRVV 137
GNK DVDGGNSRVV
Sbjct: 117 GNKTDVDGGNSRVV 130
>gi|19114436|ref|NP_593524.1| GTPase Ypt71 [Schizosaccharomyces pombe 972h-]
gi|74698144|sp|Q9HDY0.1|YPT71_SCHPO RecName: Full=GTP-binding protein ypt71
gi|12188974|emb|CAC21483.1| GTPase Ypt71 [Schizosaccharomyces pombe]
Length = 208
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 120/154 (77%), Gaps = 8/154 (5%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++R LKV+ILGDSGVGKT LMNQ+VN+KFS +YKATIGADFLTK+V +D+L TLQ
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLG+AFYRGADCCV+VY+VN+ KSFD++ NWR+EFL Q S D FPF
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTS-QDECAFPF 119
Query: 121 VVLGNKIDVDGGNSRV-------VCFGEEGSSMV 147
+++GN+ID D V C + GS+M+
Sbjct: 120 IIVGNQIDKDASKRAVSLHRALDYCKSKHGSNMI 153
>gi|452820386|gb|EME27429.1| Rab family, other [Galdieria sulphuraria]
Length = 206
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/130 (68%), Positives = 110/130 (84%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R LLKV++LGDSGVGKTSL+ ++VN++FS QYKATIGADFLTK++ +DR LQIWDT
Sbjct: 8 RPKLLKVVVLGDSGVGKTSLLERFVNRRFSQQYKATIGADFLTKDMFVDDRNVNLQIWDT 67
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQER+QSLG AFYRGAD CVLVYD+ +KSF++L WR+EFL+ ASPSDP +FPF+VLG
Sbjct: 68 AGQERYQSLGSAFYRGADACVLVYDITDVKSFESLETWRDEFLVSASPSDPQHFPFIVLG 127
Query: 125 NKIDVDGGNS 134
NK D++G S
Sbjct: 128 NKSDLEGQRS 137
>gi|297847216|ref|XP_002891489.1| hypothetical protein ARALYDRAFT_891777 [Arabidopsis lyrata subsp.
lyrata]
gi|297337331|gb|EFH67748.1| hypothetical protein ARALYDRAFT_891777 [Arabidopsis lyrata subsp.
lyrata]
Length = 101
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/109 (88%), Positives = 99/109 (90%), Gaps = 9/109 (8%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MPSRRRTLLKVIILGDSG YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSG---------YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 51
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQ 109
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNS KSF++LNNWREEFLIQ
Sbjct: 52 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQ 100
>gi|448523590|ref|XP_003868901.1| Ypt72 GTPase [Candida orthopsilosis Co 90-125]
gi|380353241|emb|CCG25997.1| Ypt72 GTPase [Candida orthopsilosis]
Length = 211
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 110/126 (87%), Gaps = 1/126 (0%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQIWDT 64
+ LLK+I++GDSGVGKTSLM+Q+VN KFS QYKATIGADFLTKE+ + + TLQIWDT
Sbjct: 4 KKLLKIIVVGDSGVGKTSLMHQFVNNKFSQQYKATIGADFLTKEITLDGGKTVTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FPFV++G
Sbjct: 64 AGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFVIIG 123
Query: 125 NKIDVD 130
NKIDVD
Sbjct: 124 NKIDVD 129
>gi|117939081|dbj|BAF36694.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 196
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/128 (71%), Positives = 108/128 (84%), Gaps = 2/128 (1%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
KV++LGDSGVGKT L+NQ+ KFS QYKATIGADFLTKEV ++R T+QIWDTAG ER
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKEVVVDNRQVTMQIWDTAGLER 60
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
FQSLGVAFYRGAD C+LVYDV + K+F+NL+ W+EEFL Q SP DPDNFPF++LGNKID+
Sbjct: 61 FQSLGVAFYRGADACILVYDVTAPKTFENLDGWKEEFLFQGSPQDPDNFPFMLLGNKIDL 120
Query: 130 DGGNSRVV 137
+ SRVV
Sbjct: 121 E--ESRVV 126
>gi|354548148|emb|CCE44884.1| hypothetical protein CPAR2_406870 [Candida parapsilosis]
Length = 210
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/124 (70%), Positives = 109/124 (87%), Gaps = 1/124 (0%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQIWDTAG 66
LLKVI++GDSGVGKTSLM+Q+VN KFS QYKATIGADFLTKE+ + + TLQIWDTAG
Sbjct: 5 LLKVIVVGDSGVGKTSLMHQFVNNKFSQQYKATIGADFLTKEITLDGGKKVTLQIWDTAG 64
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QERFQSLGVAFYRGADCCVL +DV + KS +NL +W++EFL+Q++ S+P +FPF+++GNK
Sbjct: 65 QERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFIIIGNK 124
Query: 127 IDVD 130
IDVD
Sbjct: 125 IDVD 128
>gi|117939031|dbj|BAF36669.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939033|dbj|BAF36670.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939035|dbj|BAF36671.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939037|dbj|BAF36672.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 195
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/128 (71%), Positives = 107/128 (83%), Gaps = 2/128 (1%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
KV++LGDSGVGKT L+NQ+ KFS QYKATIGADFLTKEV ++R T+QIWDTAG ER
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKEVVVDNRQVTMQIWDTAGLER 60
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
FQSLGVAFYRGAD C+LVYDV + K+FDNL+ W+EEFL Q SP DPDNFPF++LGNKID+
Sbjct: 61 FQSLGVAFYRGADACILVYDVTAPKTFDNLDGWKEEFLFQGSPQDPDNFPFMLLGNKIDL 120
Query: 130 DGGNSRVV 137
+ RVV
Sbjct: 121 E--EQRVV 126
>gi|117939025|dbj|BAF36666.1| Small G Protein RAB [Trichonympha agilis]
gi|117939027|dbj|BAF36667.1| Small G Protein RAB [Trichonympha agilis]
gi|117939029|dbj|BAF36668.1| Small G Protein RAB [Trichonympha agilis]
Length = 170
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/128 (71%), Positives = 107/128 (83%), Gaps = 2/128 (1%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
KV++LGDSGVGKT L+NQ+ KFS QYKATIGADFLTKEV ++R T+QIWDTAG ER
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKEVVVDNRQVTMQIWDTAGLER 60
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
FQSLGVAFYRGAD C+LVYDV + K+FDNL+ W+EEFL Q SP DPDNFPF++LGNKID+
Sbjct: 61 FQSLGVAFYRGADACILVYDVTAPKTFDNLDGWKEEFLFQGSPQDPDNFPFMLLGNKIDL 120
Query: 130 DGGNSRVV 137
+ RVV
Sbjct: 121 E--EQRVV 126
>gi|440802977|gb|ELR23891.1| Ras-related protein Rab-7A [Acanthamoeba castellanii str. Neff]
gi|440803579|gb|ELR24469.1| rasrelated protein Rab-7, putative [Acanthamoeba castellanii str.
Neff]
Length = 186
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 108/137 (78%), Gaps = 20/137 (14%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLK+IILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV +D+L TLQ
Sbjct: 1 MSTRKKVLLKIIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGAD CVLV+DVN A P DP+ FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADACVLVFDVN------------------AGPRDPETFPF 102
Query: 121 VVLGNKIDVDGGNSRVV 137
+VLGNKID++ +SRVV
Sbjct: 103 IVLGNKIDLE--SSRVV 117
>gi|256083426|ref|XP_002577945.1| rab9 and [Schistosoma mansoni]
gi|353229652|emb|CCD75823.1| putative rab9 and [Schistosoma mansoni]
Length = 205
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 102/116 (87%)
Query: 15 GDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLG 74
GDSGVGKTSL+ QY++KKFSNQYKATIGADF TK+ F+DRL T+QIWDTAGQERFQSLG
Sbjct: 15 GDSGVGKTSLITQYIDKKFSNQYKATIGADFFTKQEVFDDRLVTMQIWDTAGQERFQSLG 74
Query: 75 VAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
VAFYRGADCCVLVYDV +F L++WR+EFL+Q+SP +P+ FPF+V+GNK D+D
Sbjct: 75 VAFYRGADCCVLVYDVTMTSTFKTLDSWRDEFLVQSSPRNPERFPFIVIGNKCDLD 130
>gi|29841442|gb|AAP06474.1| SJCHGC06013 protein [Schistosoma japonicum]
gi|226466782|emb|CAX69526.1| RAB7, member RAS oncogene family [Schistosoma japonicum]
Length = 205
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 102/116 (87%)
Query: 15 GDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLG 74
GDSGVGKTSL+ QY++KKFSNQYKATIGADF TK+ F+DRL T+QIWDTAGQERFQSLG
Sbjct: 15 GDSGVGKTSLITQYIDKKFSNQYKATIGADFFTKQEVFDDRLVTMQIWDTAGQERFQSLG 74
Query: 75 VAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
VAFYRGADCCVLVYDV+ +F L++WR EFL+Q+SP +P+ FPF+V+GNK D+D
Sbjct: 75 VAFYRGADCCVLVYDVSMTSTFKTLDSWRNEFLVQSSPRNPEKFPFIVIGNKCDLD 130
>gi|384485925|gb|EIE78105.1| vacuolar biogenesis protein [Rhizopus delemar RA 99-880]
Length = 400
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/127 (72%), Positives = 101/127 (79%), Gaps = 11/127 (8%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYVNKKFSNQYKATIGADFLTKEV DRL T+QIWDTAGQERFQSLGVAFYRGADCC
Sbjct: 1 MNQYVNKKFSNQYKATIGADFLTKEVMVGDRLVTMQIWDTAGQERFQSLGVAFYRGADCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVCFGEEGS 144
VL YDVN+ KSF+ L+ WR+EFL+QASP DP+ FPFV+LGNKIDV EE
Sbjct: 61 VLAYDVNNSKSFEALDQWRDEFLVQASPRDPECFPFVLLGNKIDV-----------EESK 109
Query: 145 SMVCLQR 151
MV +R
Sbjct: 110 RMVSQKR 116
>gi|401883503|gb|EJT47711.1| Rab7 [Trichosporon asahii var. asahii CBS 2479]
Length = 670
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 86/112 (76%), Positives = 99/112 (88%), Gaps = 7/112 (6%)
Query: 19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFY 78
VGKTSLMNQYVNK+FSNQYKATIGADFLT+E+ +DR+ T+Q+WDTAGQERFQSLGVAFY
Sbjct: 47 VGKTSLMNQYVNKRFSNQYKATIGADFLTRELVVDDRVVTMQLWDTAGQERFQSLGVAFY 106
Query: 79 RGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
RGADCCVLVYDVNS KSF+ L+ WR+EFL+Q NFPFVVLGNKID++
Sbjct: 107 RGADCCVLVYDVNSSKSFEALDGWRDEFLVQ-------NFPFVVLGNKIDME 151
>gi|195392373|ref|XP_002054832.1| GJ24657 [Drosophila virilis]
gi|194152918|gb|EDW68352.1| GJ24657 [Drosophila virilis]
Length = 229
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/157 (58%), Positives = 108/157 (68%), Gaps = 24/157 (15%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + LLK+++LGD GVGKTSLMN+YVNK F+N YKA+IG DF +KEV +R+ T+
Sbjct: 1 MSDHSKPLLKILVLGDCGVGKTSLMNRYVNKHFTNMYKASIGTDFFSKEVVVNNRMITMH 60
Query: 61 I------------------------WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSF 96
+ WDTAGQERFQ+LGVAFYRG DCCVLVYDV S KSF
Sbjct: 61 VSLNFASPIFVYVLLYCRGLSFIEFWDTAGQERFQTLGVAFYRGTDCCVLVYDVTSPKSF 120
Query: 97 DNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGN 133
NLN WR+EFLIQ SP DPD+FPFVVLGNK D+D N
Sbjct: 121 KNLNLWRDEFLIQTSPRDPDSFPFVVLGNKADLDEQN 157
>gi|351703936|gb|EHB06855.1| Ras-related protein Rab-7a [Heterocephalus glaber]
Length = 183
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 97/107 (90%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYVNKKFSNQYKATIGADFLTKEV +DRL T+QIWDTAGQERFQSLGVAFYRGADCC
Sbjct: 1 MNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDG 131
VLV+DV + +F L++WR+EFLIQASP DP+NFPFVVLGNKID++
Sbjct: 61 VLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN 107
>gi|57491800|gb|AAW51395.1| GekBS079P [Gekko japonicus]
Length = 183
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 97/107 (90%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYVNKKFSNQYKATIGADFLTKEV +DRL T+QIWDTAGQERFQSLGVAFYRGADCC
Sbjct: 1 MNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDG 131
VLV+DV + +F L++WR+EFLIQASP DP+NFPFVVLGNKID++
Sbjct: 61 VLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN 107
>gi|302830546|ref|XP_002946839.1| RabG/Rab7 [Volvox carteri f. nagariensis]
gi|300267883|gb|EFJ52065.1| RabG/Rab7 [Volvox carteri f. nagariensis]
Length = 181
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 100/113 (88%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYV KKF+ +YKATIGADFLTKE++ +D+ T+QIWDTAGQERFQSLG AFYRGADCC
Sbjct: 1 MNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQERFQSLGSAFYRGADCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVV 137
+LV+DVN+ KSFD+L+NWR+EF+IQA PSDPDNFPFVVLGNKID G N +V
Sbjct: 61 MLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPFVVLGNKIDEVGVNRQVT 113
>gi|154283303|ref|XP_001542447.1| GTP-binding protein YPT7 [Ajellomyces capsulatus NAm1]
gi|150410627|gb|EDN06015.1| GTP-binding protein YPT7 [Ajellomyces capsulatus NAm1]
Length = 216
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 85/106 (80%), Positives = 99/106 (93%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYVNKK+S+ YKATIGAD+LTK+V +DRL TLQ+WDTAGQERFQSLGVAFYRGADCC
Sbjct: 1 MNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQLWDTAGQERFQSLGVAFYRGADCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
VLVYDVN+ KSF+ L++WR+EFLIQASP DP++FPFVVLGNKIDV+
Sbjct: 61 VLVYDVNNSKSFETLDSWRDEFLIQASPRDPESFPFVVLGNKIDVE 106
>gi|117939083|dbj|BAF36695.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 196
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/128 (69%), Positives = 105/128 (82%), Gaps = 2/128 (1%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
KV++LGDSGVGKT L+NQ+ KFS QYKATIGADFLTKEV ++R T+QIWDTAG ER
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKEVVVDNRQVTMQIWDTAGLER 60
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
FQSLGVA YRGAD C+LVYDV K+F+NL+ W+EEFL Q SP DPDNFPF++LGNKID+
Sbjct: 61 FQSLGVALYRGADACILVYDVTQPKTFENLDGWKEEFLFQGSPQDPDNFPFMLLGNKIDL 120
Query: 130 DGGNSRVV 137
+ RVV
Sbjct: 121 E--EQRVV 126
>gi|145546424|ref|XP_001458895.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831428|emb|CAI39303.1| rab_C51 [Paramecium tetraurelia]
gi|124426717|emb|CAK91498.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 107/128 (83%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S+++ L K+IILGDSGVGK++LM+QYVN +F+ YKA++G DF+ K+V +DR+ TLQ
Sbjct: 1 MASQKKQLFKIIILGDSGVGKSALMDQYVNARFTQLYKASVGTDFMGKKVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLG AFYRGADCCVLVYD+ + KSFD+L++ R EFL+Q P P++FPF
Sbjct: 61 LWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSQRNEFLMQGQPKYPEHFPF 120
Query: 121 VVLGNKID 128
VLGNK+D
Sbjct: 121 FVLGNKLD 128
>gi|358366631|dbj|GAA83251.1| alpha-galactosidase [Aspergillus kawachii IFO 4308]
Length = 199
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/135 (68%), Positives = 106/135 (78%), Gaps = 16/135 (11%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSL-----MNQYVNKKFSNQYKATIGADFLTKEVQFEDR 55
M SR++ LLKVIILGDSGV + + Q VNKKFS YKATIGADFLTKE
Sbjct: 1 MSSRKKVLLKVIILGDSGVAVPRIPTHPHLAQQVNKKFSASYKATIGADFLTKE------ 54
Query: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP
Sbjct: 55 -----IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDP 109
Query: 116 DNFPFVVLGNKIDVD 130
++FPFVV+GNKIDV+
Sbjct: 110 ESFPFVVIGNKIDVE 124
>gi|238499803|ref|XP_002381136.1| Rab small monomeric GTPase Rab7, putative [Aspergillus flavus
NRRL3357]
gi|220692889|gb|EED49235.1| Rab small monomeric GTPase Rab7, putative [Aspergillus flavus
NRRL3357]
Length = 201
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 98/109 (89%)
Query: 22 TSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGA 81
T++ + VNKKFS YKATIGADFLTKEV +DRL T+QIWDTAGQERFQSLGVAFYRGA
Sbjct: 18 TTISAKQVNKKFSASYKATIGADFLTKEVLVDDRLVTMQIWDTAGQERFQSLGVAFYRGA 77
Query: 82 DCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
DCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP+NFPFVV+GNKIDV+
Sbjct: 78 DCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPENFPFVVIGNKIDVE 126
>gi|218188956|gb|EEC71383.1| hypothetical protein OsI_03499 [Oryza sativa Indica Group]
Length = 288
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/122 (76%), Positives = 98/122 (80%), Gaps = 15/122 (12%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQ---------------YVNKKFSNQYKATIGADFLT 47
SRRRTLLKVI+LGDSGVGKTSLMNQ YV+KKFS QYKATIGADF+T
Sbjct: 4 SRRRTLLKVIVLGDSGVGKTSLMNQFTAVVGTLICLTLVRYVHKKFSQQYKATIGADFVT 63
Query: 48 KEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFL 107
KEV EDRL TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNS +SFD LN W +EFL
Sbjct: 64 KEVLIEDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFL 123
Query: 108 IQ 109
Q
Sbjct: 124 NQ 125
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 25/28 (89%)
Query: 110 ASPSDPDNFPFVVLGNKIDVDGGNSRVV 137
ASPSDP FPF++LGNKIDVDGG SRVV
Sbjct: 192 ASPSDPKTFPFILLGNKIDVDGGKSRVV 219
>gi|358344526|ref|XP_003636340.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502275|gb|AES83478.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 226
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 110/137 (80%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M RRTLLKVI+LGDSGVGKTSLMNQY KKFS + K TIGADF+TK++Q +++L TLQ
Sbjct: 1 MALCRRTLLKVIVLGDSGVGKTSLMNQYALKKFSLKCKGTIGADFVTKDLQIDNKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT G+E FQ++ FYRGADCCVLVYDVN +SFD L++W ++FL + + S+ PF
Sbjct: 61 IWDTEGKETFQNVCADFYRGADCCVLVYDVNCFESFDILDSWHDDFLKKGNTSNHGISPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
++LGNK+D+DGG SRVV
Sbjct: 121 ILLGNKVDIDGGKSRVV 137
>gi|323447808|gb|EGB03717.1| hypothetical protein AURANDRAFT_39255 [Aureococcus anophagefferens]
Length = 183
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 82/104 (78%), Positives = 93/104 (89%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYVNK+FS YKATIGADFLTKEV +D+L TLQIWDTAGQERFQSLGVAFYRGAD C
Sbjct: 1 MNQYVNKRFSASYKATIGADFLTKEVMIDDKLVTLQIWDTAGQERFQSLGVAFYRGADAC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
+LVYD+ KSF+NL++WREEFL+QASP D +NFPFVVLGNK+D
Sbjct: 61 ILVYDITQPKSFENLDSWREEFLVQASPPDIENFPFVVLGNKLD 104
>gi|403348115|gb|EJY73488.1| CRE-RAB-7 protein [Oxytricha trifallax]
Length = 219
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 77/126 (61%), Positives = 103/126 (81%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+++ LK++ILGDSGVGKT+L+ QYVNKK + K TIGADF KE+ ++++ TLQIW
Sbjct: 4 SKKKNFLKIVILGDSGVGKTTLLQQYVNKKVNAHSKPTIGADFSKKEITIDNQIVTLQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQE+FQSLG AFYRGADCC LVYD+ + KSF++L WR+ F+ A+P+DP+ FPFV+
Sbjct: 64 DTAGQEKFQSLGYAFYRGADCCALVYDITNQKSFEDLTRWRDGFIEHAAPTDPNKFPFVL 123
Query: 123 LGNKID 128
+GNK+D
Sbjct: 124 IGNKVD 129
>gi|440295577|gb|ELP88489.1| hypothetical protein EIN_344190 [Entamoeba invadens IP1]
Length = 206
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 107/136 (78%), Gaps = 1/136 (0%)
Query: 2 PSRRR-TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
PSR++ L K+IILGDSGVGKTSL+NQYV K+FS+QYKATIGADF+TK++ ++ +LQ
Sbjct: 3 PSRKKKNLYKIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINEKQSSLQ 62
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAG ERF S G AFYRGAD C+LV DV ++SF++L WR+EF+ +PSDP+ FP+
Sbjct: 63 IWDTAGHERFASFGTAFYRGADVCMLVCDVTVVESFEHLEVWRKEFISGGNPSDPETFPY 122
Query: 121 VVLGNKIDVDGGNSRV 136
VV+ NK+D + N V
Sbjct: 123 VVIANKVDCEPANRAV 138
>gi|67483055|ref|XP_656820.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978604|dbj|BAD34969.1| EhRab7B protein [Entamoeba histolytica]
gi|56474045|gb|EAL51436.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|407044644|gb|EKE42730.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449708173|gb|EMD47684.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/133 (60%), Positives = 104/133 (78%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
++R L K+IILGDSGVGKTSL+NQYV K+FS+QYKATIGADF+TK++ D+ +LQIWD
Sbjct: 6 KKRNLFKIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQISLQIWD 65
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAG ERF S G AFYRGAD C+LV DV +SF++L WR+EF+ +PSDP++FP+VV+
Sbjct: 66 TAGHERFASFGTAFYRGADVCMLVCDVTVAESFEHLEVWRKEFISGGNPSDPESFPYVVI 125
Query: 124 GNKIDVDGGNSRV 136
NK D + N V
Sbjct: 126 ANKNDCEPANRAV 138
>gi|167395260|ref|XP_001741296.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165894193|gb|EDR22255.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 207
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/133 (60%), Positives = 104/133 (78%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
++R L K+IILGDSGVGKTSL+NQYV K+FS+QYKATIGADF+TK++ D+ +LQIWD
Sbjct: 6 KKRNLFKIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQISLQIWD 65
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAG ERF S G AFYRGAD C+LV DV +SF++L WR+EF+ +PSDP++FP+VV+
Sbjct: 66 TAGHERFASFGTAFYRGADVCMLVCDVTVAESFEHLEVWRKEFISGGNPSDPESFPYVVI 125
Query: 124 GNKIDVDGGNSRV 136
NK D + N V
Sbjct: 126 ANKNDCEPANRAV 138
>gi|30681167|ref|NP_849347.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|124301050|gb|ABN04777.1| At4g09720 [Arabidopsis thaliana]
gi|332657384|gb|AEE82784.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 172
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/102 (80%), Positives = 90/102 (88%)
Query: 36 QYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKS 95
QYKATIGADF+TKE+Q ++L TLQIWDTAGQERFQSLG AFYRGADCC LVYDVN ++S
Sbjct: 2 QYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRS 61
Query: 96 FDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVV 137
FDNL W EEFL QASPSDP FPF+VLGNKIDVDGG+SRVV
Sbjct: 62 FDNLETWHEEFLKQASPSDPKTFPFIVLGNKIDVDGGSSRVV 103
>gi|167377314|ref|XP_001734353.1| GTP-binding protein yptV5 [Entamoeba dispar SAW760]
gi|165904184|gb|EDR29502.1| GTP-binding protein yptV5, putative [Entamoeba dispar SAW760]
Length = 207
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/137 (58%), Positives = 106/137 (77%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++TLLK+I++GDS VGK+SLMNQ++NK F+ QYKATIGADFLTKE+ + LQ
Sbjct: 1 MSKPKKTLLKMILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEIDVDGESIALQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAG E+F S G AFYRG+DCC LV+DV + +SF +L+ W+ +FL A+P++P NFPF
Sbjct: 61 VWDTAGHEKFMSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDFLSGANPTNPTNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNK+D D RVV
Sbjct: 121 VVMGNKVDEDAA-KRVV 136
>gi|358339881|dbj|GAA47859.1| Ras-related protein Rab-7A [Clonorchis sinensis]
Length = 181
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 92/105 (87%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQYV +KFSNQYKATIGADFLTKE +DR+ TLQ+WDTAGQERFQSLGVAFYRGADCC
Sbjct: 1 MNQYVTRKFSNQYKATIGADFLTKETVVDDRVATLQLWDTAGQERFQSLGVAFYRGADCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
VLVYDV +F L++WR+EFLIQASP DP+NFPFVV+GNK D+
Sbjct: 61 VLVYDVTMPNTFKTLDSWRDEFLIQASPRDPENFPFVVIGNKCDL 105
>gi|83273968|ref|XP_729630.1| Rab7 GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23487996|gb|EAA21195.1| putative Rab7 GTPase [Plasmodium yoelii yoelii]
Length = 232
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 82/123 (66%), Positives = 100/123 (81%), Gaps = 12/123 (9%)
Query: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAF 77
VGKTSLMNQYVNKKF+NQYKATIGADFLTKE ++ T+QIWDTAGQERFQSLGVAF
Sbjct: 9 SVGKTSLMNQYVNKKFTNQYKATIGADFLTKETVVDNEQLTMQIWDTAGQERFQSLGVAF 68
Query: 78 YRGADCCVLVYDVNSMKSFDNLNNWREEFLIQ------------ASPSDPDNFPFVVLGN 125
YRGADCCVLV+D+ + K++++L +W++EFLIQ ASP DP+NFPFV++GN
Sbjct: 69 YRGADCCVLVFDLTNYKTYESLESWKDEFLIQVKKMKENKLSKCASPKDPENFPFVIIGN 128
Query: 126 KID 128
K+D
Sbjct: 129 KVD 131
>gi|403366463|gb|EJY83034.1| Rab7, putative [Oxytricha trifallax]
Length = 219
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 78/126 (61%), Positives = 101/126 (80%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+++ LK++ILGDSGVGKT+L+ QYV+ K + K TIGADF KE+ ++ + TLQIW
Sbjct: 2 SKKKNFLKIVILGDSGVGKTTLLQQYVSGKSNPHSKPTIGADFSKKELMIDNTVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQE+FQSLG AFYRGADCC LVYD+ + KSFD+LN WR+ F+ A+P DP+ FPFVV
Sbjct: 62 DTAGQEKFQSLGYAFYRGADCCALVYDITNQKSFDDLNKWRDGFIEHAAPPDPNTFPFVV 121
Query: 123 LGNKID 128
+GNK+D
Sbjct: 122 IGNKLD 127
>gi|322712842|gb|EFZ04415.1| putative Ras- protein Rab7 [Metarhizium anisopliae ARSEF 23]
Length = 203
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 100/124 (80%), Gaps = 8/124 (6%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
T + I++G+ G+ V KKFS YKATIGADFLT+EV +DR T+Q+WDTAG
Sbjct: 13 TTTQSILMGNGGI--------QVKKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAG 64
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP DP NFPFVVLGNK
Sbjct: 65 QERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNFPFVVLGNK 124
Query: 127 IDVD 130
IDV+
Sbjct: 125 IDVE 128
>gi|403376123|gb|EJY88041.1| Ras-related protein RABG3b [Oxytricha trifallax]
Length = 249
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 102/132 (77%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R+ +K++I+GDSGVGKTSL+ + + KF+ +K TIGADF KE+ +DR+ TLQIWDT
Sbjct: 15 RKCFVKLVIIGDSGVGKTSLIQMFEHNKFNQSFKPTIGADFSNKELTIDDRIVTLQIWDT 74
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERFQSLG AFYRGADCCVLVYDV + SF+NL NW+ FL ++ P +P PF+VLG
Sbjct: 75 AGQERFQSLGSAFYRGADCCVLVYDVTNPMSFENLLNWKSIFLTKSEPREPHTLPFLVLG 134
Query: 125 NKIDVDGGNSRV 136
NK+DVD G ++
Sbjct: 135 NKMDVDAGQKKI 146
>gi|403353512|gb|EJY76294.1| hypothetical protein OXYTRI_02199 [Oxytricha trifallax]
Length = 240
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 102/134 (76%), Gaps = 1/134 (0%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQIWD 63
R+ +K++I+GDS VGKTS++ + +K F+ +K TIGADF TKE+ ED R+ LQIWD
Sbjct: 11 RKCFIKLVIIGDSSVGKTSIIQMFQHKHFNQSFKPTIGADFSTKEITMEDNRIVNLQIWD 70
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLG AFYRGADCC+LVYD+ + +SFD++ NWR+ FLI++ P DP PF++L
Sbjct: 71 TAGQERFQSLGSAFYRGADCCILVYDITNPQSFDHIMNWRQVFLIKSEPKDPQTLPFLIL 130
Query: 124 GNKIDVDGGNSRVV 137
GNK DV+ RV
Sbjct: 131 GNKCDVEESERRVT 144
>gi|343472019|emb|CCD15702.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 220
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 101/129 (78%), Gaps = 5/129 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + +R LLK+IILGDSGVGKTSLM+QYVNKKF N+YKATIGADFLTK++ + +L TLQ
Sbjct: 1 MSATKRQLLKIIILGDSGVGKTSLMHQYVNKKFDNRYKATIGADFLTKDIDVDGKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGAD CVLV+D+ SF ++N+W EEF QA D
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADACVLVFDITQSDSFSHINSWLEEFRAQAGLRDS----- 115
Query: 121 VVLGNKIDV 129
V++GNK D+
Sbjct: 116 VLIGNKSDL 124
>gi|45361063|ref|NP_989167.1| uncharacterized protein LOC394774 [Xenopus (Silurana) tropicalis]
gi|38649377|gb|AAH63349.1| hypothetical protein MGC75872 [Xenopus (Silurana) tropicalis]
Length = 199
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 100/126 (79%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R LK++++G++G GK++LMNQYVN +F+N Y+ATIGADF TKE++ D++ T+QIWDT
Sbjct: 3 HRKHLKLLLIGNAGSGKSALMNQYVNCRFTNYYRATIGADFFTKELRVNDKVVTVQIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG ERFQSLG A YRG DCC+LV+DV S SF L+NW EFL+QA P P +FPFVV+G
Sbjct: 63 AGTERFQSLGAALYRGTDCCLLVFDVTSPNSFHALDNWHREFLVQADPVSPGSFPFVVIG 122
Query: 125 NKIDVD 130
NK D++
Sbjct: 123 NKTDLE 128
>gi|50978606|dbj|BAD34970.1| EhRab7C protein [Entamoeba histolytica]
gi|449708719|gb|EMD48124.1| EhRab7C protein, putative [Entamoeba histolytica KU27]
Length = 207
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 105/137 (76%), Gaps = 1/137 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++TLLK+I++GDS VGK+SLMNQ++NK F+ QYKATIGADFLTKE+ + LQ
Sbjct: 1 MNKPKKTLLKMILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEIDVDGESVALQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAG E+F S G AFYRG+DCC LV+DV + +SF +L+ W+ +FL A+P++ NFPF
Sbjct: 61 VWDTAGHEKFMSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDFLSGANPTNATNFPF 120
Query: 121 VVLGNKIDVDGGNSRVV 137
VV+GNK+D D RVV
Sbjct: 121 VVMGNKVDEDAA-KRVV 136
>gi|212723896|ref|NP_001132513.1| uncharacterized protein LOC100193973 [Zea mays]
gi|194694594|gb|ACF81381.1| unknown [Zea mays]
Length = 114
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/91 (91%), Positives = 86/91 (94%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
SRRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKEV EDRL TLQI
Sbjct: 3 TSRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQI 62
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNS 92
WDTAGQERFQSLGVAFYRGADCCVLVYDVNS
Sbjct: 63 WDTAGQERFQSLGVAFYRGADCCVLVYDVNS 93
>gi|71659798|ref|XP_821619.1| rab7 GTP binding protein [Trypanosoma cruzi strain CL Brener]
gi|70887003|gb|EAN99768.1| rab7 GTP binding protein, putative [Trypanosoma cruzi]
Length = 221
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 102/127 (80%), Gaps = 5/127 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVNKKF ++YKATIGADFLTK+++ +L TLQIW
Sbjct: 2 SSKRQLLKIIILGDSGVGKTSLMHQYVNKKFDSRYKATIGADFLTKDLELNGQLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++++W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFSHISSWLEEFNIQAGKRDS-----VL 116
Query: 123 LGNKIDV 129
+GNK D+
Sbjct: 117 IGNKTDL 123
>gi|4895063|gb|AAD32707.1|AF146042_1 GTP-binding protein [Trypanosoma cruzi]
gi|407847514|gb|EKG03204.1| rab7 GTP binding protein, putative [Trypanosoma cruzi]
Length = 221
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 102/127 (80%), Gaps = 5/127 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVNKKF ++YKATIGADFLTK+++ +L TLQIW
Sbjct: 2 SSKRQLLKIIILGDSGVGKTSLMHQYVNKKFDSRYKATIGADFLTKDLELNGQLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++++W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFSHISSWLEEFNIQAGKRDS-----VL 116
Query: 123 LGNKIDV 129
+GNK D+
Sbjct: 117 IGNKTDL 123
>gi|397632147|gb|EJK70436.1| hypothetical protein THAOC_08208 [Thalassiosira oceanica]
Length = 251
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 103/138 (74%), Gaps = 6/138 (4%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-----RLFTL 59
++ +LK++ILGDSGVGKTSLMN+Y + KF+ QYKATIGADFL+K V D R TL
Sbjct: 25 KKHMLKLVILGDSGVGKTSLMNRYHSNKFTGQYKATIGADFLSKHVSITDQTGNVRNVTL 84
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSD-PDNF 118
QIWDTAGQERFQSLGVAFYRGAD LVYDV KSFD+L+NWR EFL Q + NF
Sbjct: 85 QIWDTAGQERFQSLGVAFYRGADAVALVYDVGDAKSFDHLDNWRGEFLRQVGIDEIGANF 144
Query: 119 PFVVLGNKIDVDGGNSRV 136
PF++LGNKID G +V
Sbjct: 145 PFILLGNKIDRPEGERQV 162
>gi|317418970|emb|CBN81008.1| Ras-related protein Rab-7a [Dicentrarchus labrax]
Length = 204
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 93/121 (76%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LK+I++G SGVGK+S MN+YVN +F+N Y+AT+G DFL+K V E TLQIWDTAG E
Sbjct: 10 LKIILIGSSGVGKSSFMNRYVNHRFTNMYRATVGTDFLSKTVTIEGDTVTLQIWDTAGTE 69
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RFQSLG+ YRGA CC+LV+DV S SF L WR+EFLIQ P DP +FPF+VLGNK D
Sbjct: 70 RFQSLGMPLYRGAHCCMLVFDVTSRASFSALEGWRKEFLIQGEPEDPSDFPFIVLGNKTD 129
Query: 129 V 129
+
Sbjct: 130 L 130
>gi|300120301|emb|CBK19855.2| unnamed protein product [Blastocystis hominis]
Length = 208
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 104/127 (81%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+RR+ LK+IILGDS VGKT ++ Q+V KFS++YK+TIGADF ++V ++ +++QIW
Sbjct: 4 SKRRSSLKLIILGDSSVGKTCIIQQFVFNKFSDKYKSTIGADFFPRDVMIDNTPYSVQIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQER+QSLG +FYRG D C+L +D+ + K+F NL W++EFL+ A+P+DP NFPFV+
Sbjct: 64 DTAGQERYQSLGSSFYRGTDACILAFDLTNAKTFKNLEKWQDEFLVTAAPADPLNFPFVI 123
Query: 123 LGNKIDV 129
+GNK+DV
Sbjct: 124 VGNKVDV 130
>gi|348510295|ref|XP_003442681.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
Length = 204
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 95/121 (78%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LKVI++G+SGVGK+S+MN+YVN +F+N Y+AT+G DFL+K + + TLQIWDTAG E
Sbjct: 10 LKVILIGNSGVGKSSVMNRYVNHRFTNMYRATVGTDFLSKTINIDGDTVTLQIWDTAGTE 69
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RFQSLG YRGA CC+LV+DV S SF L+ WR+EFLIQ P DP +FPF+VLGNK D
Sbjct: 70 RFQSLGTPLYRGAHCCMLVFDVTSKASFSALDGWRKEFLIQGEPKDPSDFPFIVLGNKTD 129
Query: 129 V 129
+
Sbjct: 130 L 130
>gi|340056350|emb|CCC50681.1| putative rab7 GTP binding protein [Trypanosoma vivax Y486]
Length = 211
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 102/127 (80%), Gaps = 5/127 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVNKKF N+YKATIGADF+TKE++ + + TLQIW
Sbjct: 2 STKRQLLKIIILGDSGVGKTSLMHQYVNKKFDNRYKATIGADFMTKELEVDGKSVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD CVLV+D+ +SF ++N+W EEF +QA + V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACVLVFDITQQESFSHVNSWLEEFRVQAGKCN-----CVL 116
Query: 123 LGNKIDV 129
+GNK D+
Sbjct: 117 IGNKSDL 123
>gi|407408272|gb|EKF31779.1| rab7 GTP binding protein, putative, partial [Trypanosoma cruzi
marinkellei]
Length = 259
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 102/127 (80%), Gaps = 5/127 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVNKKF ++YKATIGADFLTK+++ ++ TLQIW
Sbjct: 40 SSKRQLLKIIILGDSGVGKTSLMHQYVNKKFDSRYKATIGADFLTKDLELNGQVVTLQIW 99
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++++W EEF IQA D V+
Sbjct: 100 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFSHISSWLEEFNIQAGKRDS-----VL 154
Query: 123 LGNKIDV 129
+GNK D+
Sbjct: 155 IGNKTDL 161
>gi|123419727|ref|XP_001305617.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736252|gb|AAX97455.1| small Rab GTPase Rab7c [Trichomonas vaginalis]
gi|121887146|gb|EAX92687.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 202
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 100/129 (77%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR RT+LKV+ LGD+G GKT L+NQYV+++FS+ YK TIG+DF +K+V+ + + TLQ
Sbjct: 1 MASRARTMLKVLFLGDTGAGKTCLLNQYVSREFSSDYKVTIGSDFTSKQVEIDGKFVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG F+RG DC +LVYDV + KSF+N+N W+ +F+ Q NFPF
Sbjct: 61 IWDTAGQERFQSLGSTFFRGTDCLILVYDVTNAKSFENINKWKNDFVRQLELKQDSNFPF 120
Query: 121 VVLGNKIDV 129
++LGNK D+
Sbjct: 121 LLLGNKCDI 129
>gi|224005987|ref|XP_002291954.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972473|gb|EED90805.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 190
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/143 (62%), Positives = 101/143 (70%), Gaps = 11/143 (7%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED------RLFT 58
++ +LK++ILGDSGVGKTSLMN+Y + KF+ QYKATIGADFL+K V D R T
Sbjct: 1 KKHMLKLVILGDSGVGKTSLMNRYHSNKFTGQYKATIGADFLSKHVSITDPQTGSIRNVT 60
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSD---- 114
LQIWDTAGQERFQSLGVAFYRGAD LVYDV KSFD+L NWR EFL Q +
Sbjct: 61 LQIWDTAGQERFQSLGVAFYRGADAVALVYDVGDAKSFDHLENWRGEFLKQVGLDERGGG 120
Query: 115 -PDNFPFVVLGNKIDVDGGNSRV 136
FPFV+LGNKID G RV
Sbjct: 121 GGAGFPFVLLGNKIDRPEGERRV 143
>gi|440302747|gb|ELP95054.1| GTP-binding protein YPTC5, putative [Entamoeba invadens IP1]
Length = 206
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/133 (58%), Positives = 101/133 (75%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
++ LLK+I++GDSGVGK+SLMNQ++ K F+ QYKATIGADFLTKEV TLQIWD
Sbjct: 5 HKKVLLKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVSINGTAVTLQIWD 64
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAG E+F S G AFYRG+DCC+LV DV + +SF +L+ W++EFL A+ ++P +FPFVVL
Sbjct: 65 TAGHEKFMSFGAAFYRGSDCCLLVLDVTNEQSFKSLDTWKKEFLNGANVTNPKDFPFVVL 124
Query: 124 GNKIDVDGGNSRV 136
NK+D D V
Sbjct: 125 INKMDEDPSKHTV 137
>gi|401419226|ref|XP_003874103.1| putative rab7 GTP binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490337|emb|CBZ25597.1| putative rab7 GTP binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 223
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 101/128 (78%), Gaps = 5/128 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVN+ F N+YKATIGADFL+K+V+ R+ TLQIW
Sbjct: 2 SMKRQLLKIIILGDSGVGKTSLMHQYVNRIFDNRYKATIGADFLSKDVEVNGRVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++ +W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFAHVGSWLEEFSIQAGRRDS-----VL 116
Query: 123 LGNKIDVD 130
+GNK D++
Sbjct: 117 VGNKTDLE 124
>gi|403374318|gb|EJY87103.1| Ras-related protein Rab-7 [Oxytricha trifallax]
Length = 237
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 96/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+++ LK++ILGDSGVGKT+L+ Q++N K K TIGADF KE+Q + TLQIW
Sbjct: 2 SKKKNFLKIVILGDSGVGKTTLLQQFLNGKIVGNAKPTIGADFSKKEIQIDGVSVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQE+FQSLG AFYRGADCC L YD+ + SF+N+N WRE F+ A P D +NFPF++
Sbjct: 62 DTAGQEKFQSLGYAFYRGADCCCLCYDITNPNSFENMNKWREGFIENAGPEDVNNFPFMI 121
Query: 123 LGNKID 128
LGNKID
Sbjct: 122 LGNKID 127
>gi|61806526|ref|NP_001013496.1| uncharacterized protein LOC494576 [Danio rerio]
gi|60551617|gb|AAH91450.1| Si:dkey-13a21.4 [Danio rerio]
gi|182888850|gb|AAI64296.1| Si:dkey-13a21.4 protein [Danio rerio]
Length = 205
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 75/122 (61%), Positives = 98/122 (80%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LK+I++G+SGVGK+S M ++V+ +F+N Y+ATIG DFLTKE+ + R LQIWDTAG E
Sbjct: 9 LKLILIGNSGVGKSSFMTRFVDHRFTNLYRATIGVDFLTKEITVDRRPVILQIWDTAGTE 68
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF SLG + YRGA CC+LV+DV S SF+ L+ W++EFL+QA PSDP FPF+VLGNKID
Sbjct: 69 RFHSLGSSLYRGAHCCLLVFDVTSSVSFEALDVWKKEFLVQACPSDPAAFPFIVLGNKID 128
Query: 129 VD 130
+D
Sbjct: 129 LD 130
>gi|67470476|ref|XP_651202.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978610|dbj|BAD34972.1| EhRab7E protein [Entamoeba histolytica]
gi|56467907|gb|EAL45816.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449703795|gb|EMD44174.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 101/128 (78%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ ++ LLK+I++GDSGVGK+SLMNQ++ K F+ QYKATIGADFLTKEV TLQIW
Sbjct: 5 NHKKVLLKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVTINGTATTLQIW 64
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAG E+F S G AFYRG+DCC+LV DV + SF +L+ W++EFL A+ ++P++FPFVV
Sbjct: 65 DTAGHEKFMSFGAAFYRGSDCCLLVLDVTNEASFKSLDTWKKEFLNGANVTNPNDFPFVV 124
Query: 123 LGNKIDVD 130
L NK+D D
Sbjct: 125 LVNKMDED 132
>gi|328773394|gb|EGF83431.1| hypothetical protein BATDEDRAFT_84979 [Batrachochytrium
dendrobatidis JAM81]
Length = 487
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 76/125 (60%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED--RLFTLQIWDT 64
T+LKV++LGDSGVGKT+L NQ+++++F YKATIGADF+TK V E + +LQIWDT
Sbjct: 5 TILKVVVLGDSGVGKTALRNQFIHRQFVQSYKATIGADFVTKSVHVESLSKTVSLQIWDT 64
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF SLGVAF+RGAD C+LVYD + S D+L W +FL QA S+P FPF+V+G
Sbjct: 65 AGQERFHSLGVAFFRGADACILVYDTTNTSSLDHLETWMRDFLRQAGISNPAEFPFIVVG 124
Query: 125 NKIDV 129
NKID+
Sbjct: 125 NKIDL 129
>gi|322698170|gb|EFY89942.1| putative Ras-related protein Rab7 [Metarhizium acridum CQMa 102]
Length = 187
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/98 (79%), Positives = 88/98 (89%)
Query: 33 FSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNS 92
FS YKATIGADFLT+EV +DR T+Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+
Sbjct: 15 FSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNN 74
Query: 93 MKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
KSF+ L++WR+EFLIQASP DP NFPFVVLGNKIDV+
Sbjct: 75 AKSFEALDSWRDEFLIQASPRDPPNFPFVVLGNKIDVE 112
>gi|407035423|gb|EKE37699.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 101/128 (78%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ ++ LLK+I++GDSGVGK+SLMNQ++ K F+ QYKATIGADFLTKEV TLQIW
Sbjct: 5 NHKKVLLKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVTINGTATTLQIW 64
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAG E+F S G AFYRG+DCC+LV DV + SF +L+ W++EFL A+ ++P++FPFVV
Sbjct: 65 DTAGHEKFMSFGAAFYRGSDCCLLVLDVTNEASFKSLDTWKKEFLNGANVTNPNDFPFVV 124
Query: 123 LGNKIDVD 130
L NK+D D
Sbjct: 125 LINKMDED 132
>gi|440298742|gb|ELP91373.1| GTP-binding protein yptV5, putative [Entamoeba invadens IP1]
Length = 213
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 102/133 (76%), Gaps = 1/133 (0%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+R L+K+I++GDSGVGK+ LMNQ++NK F ++YKATIGADFLT+E+ LQ+WDT
Sbjct: 6 KRPLIKMILIGDSGVGKSCLMNQFINKAFVSEYKATIGADFLTRELDVNGDQVALQVWDT 65
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG E+F S G AFYRG++CC LV DV + KSF++L+ W+ EF+ A PS+P FPFVVL
Sbjct: 66 AGHEKFMSFGQAFYRGSECCFLVCDVTNEKSFESLDTWKAEFIKGACPSNPSEFPFVVLA 125
Query: 125 NKIDVDGGNSRVV 137
NK+D D N+RVV
Sbjct: 126 NKVDED-ANTRVV 137
>gi|398013821|ref|XP_003860102.1| rab7 GTP binding protein, putative [Leishmania donovani]
gi|322498321|emb|CBZ33395.1| rab7 GTP binding protein, putative [Leishmania donovani]
Length = 223
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 100/128 (78%), Gaps = 5/128 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVN F N+YKATIGADFL+K+V+ R+ TLQIW
Sbjct: 2 SMKRQLLKIIILGDSGVGKTSLMHQYVNHIFDNRYKATIGADFLSKDVEVNGRVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++ +W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFAHVGSWLEEFSIQAGRRDS-----VL 116
Query: 123 LGNKIDVD 130
+GNK D++
Sbjct: 117 VGNKTDLE 124
>gi|406698207|gb|EKD01448.1| RAB small monomeric GTPase [Trichosporon asahii var. asahii CBS
8904]
Length = 654
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 74/91 (81%), Positives = 85/91 (93%)
Query: 19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFY 78
VGKTSLMNQYVNK+FSNQYKATIGADFLT+E+ +DR+ T+Q+WDTAGQERFQSLGVAFY
Sbjct: 47 VGKTSLMNQYVNKRFSNQYKATIGADFLTRELVVDDRVVTMQLWDTAGQERFQSLGVAFY 106
Query: 79 RGADCCVLVYDVNSMKSFDNLNNWREEFLIQ 109
RGADCCVLVYDVNS KSF+ L+ WR+EFL+Q
Sbjct: 107 RGADCCVLVYDVNSSKSFEALDGWRDEFLVQ 137
>gi|339897895|ref|XP_003392405.1| putative rab7 GTP binding protein [Leishmania infantum JPCM5]
gi|321399296|emb|CBZ08564.1| putative rab7 GTP binding protein [Leishmania infantum JPCM5]
Length = 223
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 100/128 (78%), Gaps = 5/128 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVN F N+YKATIGADFL+K+V+ R+ TLQIW
Sbjct: 2 SMKRQLLKIIILGDSGVGKTSLMHQYVNHIFDNRYKATIGADFLSKDVEVNGRVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++ +W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFAHVGSWLEEFSIQAGRRDS-----VL 116
Query: 123 LGNKIDVD 130
+GNK D++
Sbjct: 117 VGNKTDLE 124
>gi|167387463|ref|XP_001738174.1| GTP-binding protein yptV5 [Entamoeba dispar SAW760]
gi|165898751|gb|EDR25535.1| GTP-binding protein yptV5, putative [Entamoeba dispar SAW760]
Length = 207
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 101/128 (78%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ ++ LLK+I++GDSGVGK+SLMNQ++ K F+ QYKATIGADFLTKEV TLQIW
Sbjct: 5 NHKKVLLKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVTINGTATTLQIW 64
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAG E+F S G AFYRG+DCC+LV D+ + SF +L+ W++EFL A+ ++P++FPFVV
Sbjct: 65 DTAGHEKFMSFGAAFYRGSDCCLLVLDITNEASFKSLDTWKKEFLNGANVTNPNDFPFVV 124
Query: 123 LGNKIDVD 130
L NK+D D
Sbjct: 125 LVNKMDED 132
>gi|9758338|dbj|BAB08894.1| Ras-related protein RAB7-like [Arabidopsis thaliana]
Length = 183
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 100/134 (74%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+T LK+I+LGDSGVGKTSL+ +Y +K F + +TI D +TKE+ +R LQIWDT
Sbjct: 2 EKTKLKIILLGDSGVGKTSLLKRYPHKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDT 61
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYR DCCVLVYDVN++K+F++++NW +EF+ QA+P P FPFV++G
Sbjct: 62 AGQERFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMG 121
Query: 125 NKIDVDGGNSRVVC 138
NK DV+ G RVV
Sbjct: 122 NKTDVNNGKPRVVA 135
>gi|123501229|ref|XP_001328023.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736248|gb|AAX97453.1| small Rab GTPase Rab7a [Trichomonas vaginalis]
gi|121910961|gb|EAY15800.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 203
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 100/129 (77%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR R +LK+++LGD+ VGKTSL+NQ+VN++F++ YKATIG+DF +K++ + TLQ
Sbjct: 1 MASRGRQMLKLLLLGDASVGKTSLLNQFVNREFTSSYKATIGSDFSSKQLDVDGHYVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG FYRG DCC+LVYDV SF+N+ WR EF +Q S+ +FPF
Sbjct: 61 IWDTAGQERFQSLGPTFYRGTDCCILVYDVTKPASFENIKKWRNEFSLQLGLSNASDFPF 120
Query: 121 VVLGNKIDV 129
++LGNK D+
Sbjct: 121 LLLGNKSDL 129
>gi|18421886|ref|NP_568566.1| RAB GTPase homolog G1 [Arabidopsis thaliana]
gi|75164694|sp|Q948K6.1|RABG1_ARATH RecName: Full=Ras-related protein RABG1; Short=AtRABG1; AltName:
Full=Ras-related protein Rab78; Short=AtRab78
gi|15718422|dbj|BAB68378.1| AtRab78 [Arabidopsis thaliana]
gi|332007072|gb|AED94455.1| RAB GTPase homolog G1 [Arabidopsis thaliana]
Length = 204
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 100/132 (75%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
+T LK+I+LGDSGVGKTSL+ +Y +K F + +TI D +TKE+ +R LQIWDTA
Sbjct: 3 KTKLKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTA 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERF+SL FYR DCCVLVYDVN++K+F++++NW +EF+ QA+P P FPFV++GN
Sbjct: 63 GQERFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGN 122
Query: 126 KIDVDGGNSRVV 137
K DV+ G RVV
Sbjct: 123 KTDVNNGKPRVV 134
>gi|154101355|gb|ABS58502.1| Rab7 [Leishmania donovani]
Length = 223
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 98/128 (76%), Gaps = 5/128 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVN F N+YKATIGADFL+K+V+ R+ TLQIW
Sbjct: 2 SMKRQLLKIIILGDSGVGKTSLMHQYVNHIFDNRYKATIGADFLSKDVEVNGRVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+D +SF + +W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDATQQESFAHAGSWLEEFSIQAGRRDS-----VL 116
Query: 123 LGNKIDVD 130
+GNK D++
Sbjct: 117 VGNKTDLE 124
>gi|148222619|ref|NP_001084671.1| RAB9A, member RAS oncogene family [Xenopus laevis]
gi|46249558|gb|AAH68782.1| Rab9a-a protein [Xenopus laevis]
Length = 201
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 98/127 (77%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLK+I+LGD GVGK+SLMN+YV KF Q TIG +FL KE++ + L T+QIW
Sbjct: 2 STKSSLLKIILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHLVTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L + V+ +SF NLNNW++EF+ A DPD+FPFV+
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLNNWKKEFIYYADVKDPDSFPFVI 121
Query: 123 LGNKIDV 129
LGNKID+
Sbjct: 122 LGNKIDI 128
>gi|154335561|ref|XP_001564019.1| putative rab7 GTP binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|18997099|gb|AAL83291.1|AF474147_1 Rab7-like protein [Leishmania braziliensis]
gi|134061050|emb|CAM38069.1| putative rab7 GTP binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 223
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 102/130 (78%), Gaps = 6/130 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP +R+ LLK+IILGDSGVGKTSLM+QYV+ F ++YKATIGADFL+K+V+ R+ TLQ
Sbjct: 1 MPMKRQ-LLKIIILGDSGVGKTSLMHQYVSHTFDSRYKATIGADFLSKDVEVNGRVVTLQ 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLG AFYRGAD C+LV+DV +SF ++ +W EEF IQA D
Sbjct: 60 IWDTAGQERFQSLGSAFYRGADACILVFDVTQQESFAHIGSWMEEFSIQAGRRDS----- 114
Query: 121 VVLGNKIDVD 130
V++GNK D++
Sbjct: 115 VLVGNKTDLE 124
>gi|157867883|ref|XP_001682495.1| putative rab7 GTP binding protein [Leishmania major strain
Friedlin]
gi|6983543|emb|CAB75350.1| LmRab7 GTP-binding protein [Leishmania major]
gi|68125949|emb|CAJ03806.1| putative rab7 GTP binding protein [Leishmania major strain
Friedlin]
Length = 223
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 100/128 (78%), Gaps = 5/128 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S +R LLK+IILGDSGVGKTSLM+QYVN+ F N+YKATIGADFL+K+V+ + TLQIW
Sbjct: 2 SMKRQLLKIIILGDSGVGKTSLMHQYVNRIFDNRYKATIGADFLSKDVEVNGCVVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERFQSLG AFYRGAD C+LV+DV +SF ++ +W EEF IQA D V+
Sbjct: 62 DTAGQERFQSLGSAFYRGADACILVFDVTQQESFAHVGSWLEEFSIQAGRRDS-----VL 116
Query: 123 LGNKIDVD 130
+GNK D++
Sbjct: 117 VGNKTDLE 124
>gi|403354847|gb|EJY76983.1| hypothetical protein OXYTRI_01389 [Oxytricha trifallax]
Length = 785
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 103/137 (75%), Gaps = 2/137 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
++ +KV+ +GDSGVGKTSL+ + N KF+ +K TIGADF KE+Q R+ TLQIWDT
Sbjct: 569 KKCFIKVVAIGDSGVGKTSLIQMFENTKFTENFKPTIGADFSNKEIQVNGRIVTLQIWDT 628
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQER+QSLG AFYRGADCC LVYDV +++SF+N+ NW+ FL ++ P++FPF+V+G
Sbjct: 629 AGQERYQSLGTAFYRGADCCFLVYDVTNLQSFENVVNWKNSFLGKSMVVSPESFPFMVVG 688
Query: 125 NKIDVDGGNSRVVCFGE 141
NKID++ R V F +
Sbjct: 689 NKIDLES--DRQVSFDQ 703
>gi|33468618|emb|CAE30413.1| novel protein similar to human and rodent member RAS oncogene
family RAB7 (RAB7) [Danio rerio]
Length = 176
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 98/123 (79%), Gaps = 1/123 (0%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ-IWDTAGQ 67
LK+I++G+SGVGK+S M ++V+ +F+N Y+ATIG DFLTKE+ + R LQ IWDTAG
Sbjct: 9 LKLILIGNSGVGKSSFMTRFVDHRFTNLYRATIGVDFLTKEITVDRRPVILQQIWDTAGT 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF SLG + YRGA CC+LV+DV S SF+ L+ W++EFL+QA PSDP FPF+VLGNKI
Sbjct: 69 ERFHSLGSSLYRGAHCCLLVFDVTSSVSFEALDVWKKEFLVQACPSDPAAFPFIVLGNKI 128
Query: 128 DVD 130
D+D
Sbjct: 129 DLD 131
>gi|118404644|ref|NP_001072637.1| RAB9A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|116063511|gb|AAI23092.1| RAB9A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|166796947|gb|AAI58965.1| rab9a protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 97/127 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLK+I+LGD GVGK+SLMN+YV KF Q TIG +FL KE++ + L T+QIW
Sbjct: 2 SAKSSLLKIILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHLVTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A DPD+FPFV+
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLTNWKKEFIYYADVKDPDSFPFVI 121
Query: 123 LGNKIDV 129
LGNKID+
Sbjct: 122 LGNKIDI 128
>gi|186659519|ref|NP_001085504.2| RAB9A, member RAS oncogene family [Xenopus laevis]
gi|49117011|gb|AAH72859.1| Rab9a-b protein [Xenopus laevis]
Length = 201
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 96/127 (75%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLK+I+LGD GVGK+SLMN+YV KF Q TIG +FL KE++ + + T+QIW
Sbjct: 2 STKSSLLKIILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHMVTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A DPDNFP VV
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLTNWKKEFIFYADVKDPDNFPLVV 121
Query: 123 LGNKIDV 129
LGNKID+
Sbjct: 122 LGNKIDM 128
>gi|194742730|ref|XP_001953854.1| GF17026 [Drosophila ananassae]
gi|190626891|gb|EDV42415.1| GF17026 [Drosophila ananassae]
Length = 207
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 103/139 (74%), Gaps = 3/139 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++L KVI++G+ GVGKTSL+ +YV +FS + + TIG + TKEV+ +DR TLQ
Sbjct: 1 MNCGKKSLFKVIVIGEEGVGKTSLVRRYVEGRFSIRERNTIGLNLSTKEVRVDDRAVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF L FYRG DCCVLV+D+ S+ SF +L WR++FLI+A P DP NFPF
Sbjct: 61 IWDTAGQERFLCLSSCFYRGVDCCVLVFDITSLDSFKSLGMWRDQFLIKADPRDPVNFPF 120
Query: 121 VVLGNKIDVDGG---NSRV 136
+VLGNK+D+D N+RV
Sbjct: 121 IVLGNKVDLDNSHVPNNRV 139
>gi|71745492|ref|XP_827376.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70831541|gb|EAN77046.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|74834804|emb|CAJ30027.1| rab7 homologue [Trypanosoma brucei brucei]
gi|261331581|emb|CBH14575.1| GTP-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 220
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 99/124 (79%), Gaps = 5/124 (4%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R LLK+IILGDSGVGKT+L++QYVNK F N+YKATIGADFLT++V+ + +L TLQIWDTA
Sbjct: 5 RQLLKIIILGDSGVGKTALVHQYVNKNFDNRYKATIGADFLTRDVEIDGKLVTLQIWDTA 64
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERFQSLG AFYRGAD CVLV+D+ +SF ++N+W EEF QA + V++GN
Sbjct: 65 GQERFQSLGSAFYRGADACVLVFDLTDSESFSHINSWLEEFRAQAGQRE-----CVLIGN 119
Query: 126 KIDV 129
K D+
Sbjct: 120 KSDL 123
>gi|323332296|gb|EGA73706.1| Ypt7p [Saccharomyces cerevisiae AWRI796]
gi|323347113|gb|EGA81388.1| Ypt7p [Saccharomyces cerevisiae Lalvin QA23]
gi|392297158|gb|EIW08258.1| Ypt7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 184
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 92/107 (85%), Gaps = 1/107 (0%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTLQIWDTAGQERFQSLGVAFYRGADC 83
M++YVN K+S QYKATIGADFLTKEV + D++ T+Q+WDTAGQERFQSLGVAFYRGADC
Sbjct: 1 MHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADC 60
Query: 84 CVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
CVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FPFV+LGNKID +
Sbjct: 61 CVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAE 107
>gi|118404508|ref|NP_001072679.1| RAB9B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|115313754|gb|AAI24009.1| RAB9B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|163915450|gb|AAI57274.1| RAB9B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 201
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 99/126 (78%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + RL TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL++WR+EF++ A +PD FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSSWRKEFILYADVKEPDRFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|395546391|ref|XP_003775071.1| PREDICTED: ras-related protein Rab-9B [Sarcophilus harrisii]
Length = 201
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 98/126 (77%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL+NW++EF+ A DPD+FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIYYADVKDPDHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|334350516|ref|XP_001374469.2| PREDICTED: ras-related protein Rab-9B-like [Monodelphis domestica]
Length = 201
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 98/126 (77%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL+NW++EF+ A DPD+FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIYYADVKDPDHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|323307852|gb|EGA61114.1| Ypt7p [Saccharomyces cerevisiae FostersO]
Length = 142
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 92/107 (85%), Gaps = 1/107 (0%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTLQIWDTAGQERFQSLGVAFYRGADC 83
M++YVN K+S QYKATIGADFLTKEV + D++ T+Q+WDTAGQERFQSLGVAFYRGADC
Sbjct: 1 MHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADC 60
Query: 84 CVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
CVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FPFV+LGNKID +
Sbjct: 61 CVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAE 107
>gi|219127632|ref|XP_002184036.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404759|gb|EEC44705.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 237
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/141 (59%), Positives = 96/141 (68%), Gaps = 13/141 (9%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-----R 55
M + R LK++ILGDSGVGKTSLMN+Y KF+ QYKATIGADFLTK+V D
Sbjct: 1 MAAHRPKTLKIVILGDSGVGKTSLMNRYSTGKFTGQYKATIGADFLTKQVVVTDAFGQRH 60
Query: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS-- 113
+ LQIWDTAGQERFQSLGV FYRGAD +L YDV + S DNLN+WR+EFL Q S
Sbjct: 61 VVMLQIWDTAGQERFQSLGVGFYRGADAALLCYDVTDLHSIDNLNHWRQEFLDQVGGSMM 120
Query: 114 ------DPDNFPFVVLGNKID 128
FPF VLGNK+D
Sbjct: 121 VPGLSETAAQFPFAVLGNKVD 141
>gi|407034580|gb|EKE37287.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 197
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERF 70
+I++GDS VGK+SLMNQ++NK F+ QYKATIGADFLTKE+ + LQ+WDTAG E+F
Sbjct: 1 MILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEIDVDGESVALQVWDTAGHEKF 60
Query: 71 QSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
S G AFYRG+DCC LV+DV + +SF +L+ W+ +FL A+P++ NFPFVV+GNK+D D
Sbjct: 61 MSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDFLSGANPTNATNFPFVVMGNKVDED 120
Query: 131 GGNSRVV 137
RVV
Sbjct: 121 AA-KRVV 126
>gi|183233923|ref|XP_652334.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169801344|gb|EAL46948.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 197
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERF 70
+I++GDS VGK+SLMNQ++NK F+ QYKATIGADFLTKE+ + LQ+WDTAG E+F
Sbjct: 1 MILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEIDVDGESVALQVWDTAGHEKF 60
Query: 71 QSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
S G AFYRG+DCC LV+DV + +SF +L+ W+ +FL A+P++ NFPFVV+GNK+D D
Sbjct: 61 MSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDFLSGANPTNATNFPFVVMGNKVDED 120
Query: 131 GGNSRVV 137
RVV
Sbjct: 121 AA-KRVV 126
>gi|28892801|ref|NP_795945.1| ras-related protein Rab-9B [Mus musculus]
gi|62901092|sp|Q8BHH2.1|RAB9B_MOUSE RecName: Full=Ras-related protein Rab-9B
gi|26329943|dbj|BAC28710.1| unnamed protein product [Mus musculus]
gi|26340426|dbj|BAC33876.1| unnamed protein product [Mus musculus]
gi|76826918|gb|AAI07384.1| RAB9B, member RAS oncogene family [Mus musculus]
gi|112292975|dbj|BAF02865.1| Rab9B [Mus musculus]
gi|148691930|gb|EDL23877.1| RAB9B, member RAS oncogene family [Mus musculus]
Length = 201
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 97/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DPD+FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|149640015|ref|XP_001511645.1| PREDICTED: ras-related protein Rab-9B-like [Ornithorhynchus
anatinus]
Length = 201
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 97/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DPD+FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFVYYADVKDPDHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|242088625|ref|XP_002440145.1| hypothetical protein SORBIDRAFT_09g026820 [Sorghum bicolor]
gi|241945430|gb|EES18575.1| hypothetical protein SORBIDRAFT_09g026820 [Sorghum bicolor]
Length = 170
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/108 (75%), Positives = 88/108 (81%), Gaps = 9/108 (8%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
RRRTLLKVI+LGDSG YV+KKFS QYKATIGADFLTKEV DRL TLQIWD
Sbjct: 5 RRRTLLKVIVLGDSG---------YVSKKFSQQYKATIGADFLTKEVLIGDRLVTLQIWD 55
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQAS 111
TAGQERFQSLGVAFYRGADCCVLVYDVN+ +SF+ LN W +EFL Q S
Sbjct: 56 TAGQERFQSLGVAFYRGADCCVLVYDVNAKRSFNTLNTWHDEFLNQVS 103
>gi|327287924|ref|XP_003228678.1| PREDICTED: ras-related protein Rab-9B-like [Anolis carolinensis]
Length = 201
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 106/149 (71%), Gaps = 5/149 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV +F +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNRFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL +WR+EF+ A+ DPD FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGHWRKEFVCYANIRDPDRFPFVV 121
Query: 123 LGNKIDVDGGNSRVVCFGEEGSSMVCLQR 151
LGNK+D RVV G E + CL+
Sbjct: 122 LGNKVD---KLERVV--GPEEARAWCLEH 145
>gi|351707182|gb|EHB10101.1| Ras-related protein Rab-9B [Heterocephalus glaber]
Length = 201
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 98/126 (77%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V++ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDNRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKID 128
LGNKID
Sbjct: 122 LGNKID 127
>gi|224098602|ref|XP_002188069.1| PREDICTED: ras-related protein Rab-9B [Taeniopygia guttata]
Length = 201
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 98/126 (77%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL+NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKID 128
LGNKID
Sbjct: 122 LGNKID 127
>gi|449269967|gb|EMC80702.1| Ras-related protein Rab-9B [Columba livia]
Length = 201
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 98/126 (77%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL+NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIHYADVKDPEHFPFVV 121
Query: 123 LGNKID 128
LGNKID
Sbjct: 122 LGNKID 127
>gi|432859507|ref|XP_004069141.1| PREDICTED: ras-related protein Rab-7a-like [Oryzias latipes]
Length = 204
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 92/121 (76%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LK+I++G+SGVGK+S MN+YVN +F+N Y+AT+G DF +K+ + LQIWDTAG E
Sbjct: 10 LKIILIGNSGVGKSSFMNRYVNHRFTNAYRATVGTDFFSKKTVLDGEPVILQIWDTAGTE 69
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RFQSLG YRG+ CC+LV+DV S SF L+ WR+EFL+Q P DP +FPF+VLGNK D
Sbjct: 70 RFQSLGTPLYRGSHCCLLVFDVTSSASFGALDAWRKEFLVQGEPLDPSDFPFIVLGNKTD 129
Query: 129 V 129
+
Sbjct: 130 L 130
>gi|348516818|ref|XP_003445934.1| PREDICTED: ras-related protein Rab-9B-like [Oreochromis niloticus]
Length = 202
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 100/128 (78%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV +F +Q TIG +FL ++++ + RL TLQIW
Sbjct: 2 SGKNLLLKVILLGDGGVGKSSLMNRYVTDRFDSQSFHTIGVEFLNRDLEVDGRLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + VN+++SF NL +W++EF+ + DP+ FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFAVNNLQSFQNLGSWKKEFMYYSDVKDPERFPFVV 121
Query: 123 LGNKIDVD 130
LGNKID++
Sbjct: 122 LGNKIDME 129
>gi|197099162|ref|NP_001126880.1| ras-related protein Rab-9B [Pongo abelii]
gi|387762927|ref|NP_001248685.1| ras-related protein Rab-9B [Macaca mulatta]
gi|57112293|ref|XP_538124.1| PREDICTED: ras-related protein Rab-9B [Canis lupus familiaris]
gi|149759646|ref|XP_001493021.1| PREDICTED: ras-related protein Rab-9B-like [Equus caballus]
gi|291408011|ref|XP_002720397.1| PREDICTED: RAB9B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|296236087|ref|XP_002763175.1| PREDICTED: ras-related protein Rab-9B [Callithrix jacchus]
gi|301781102|ref|XP_002925966.1| PREDICTED: ras-related protein Rab-9B-like [Ailuropoda melanoleuca]
gi|332226011|ref|XP_003262182.1| PREDICTED: ras-related protein Rab-9B [Nomascus leucogenys]
gi|344286250|ref|XP_003414872.1| PREDICTED: ras-related protein Rab-9B-like [Loxodonta africana]
gi|402910983|ref|XP_003918124.1| PREDICTED: ras-related protein Rab-9B [Papio anubis]
gi|403307676|ref|XP_003944311.1| PREDICTED: ras-related protein Rab-9B [Saimiri boliviensis
boliviensis]
gi|426396923|ref|XP_004064678.1| PREDICTED: ras-related protein Rab-9B [Gorilla gorilla gorilla]
gi|62901072|sp|Q5R4W9.1|RAB9B_PONAB RecName: Full=Ras-related protein Rab-9B
gi|55733023|emb|CAH93197.1| hypothetical protein [Pongo abelii]
gi|281342621|gb|EFB18205.1| hypothetical protein PANDA_015552 [Ailuropoda melanoleuca]
gi|355705029|gb|EHH30954.1| Rab-9-like protein [Macaca mulatta]
gi|355757583|gb|EHH61108.1| Rab-9-like protein [Macaca fascicularis]
gi|380813406|gb|AFE78577.1| ras-related protein Rab-9B [Macaca mulatta]
gi|383413739|gb|AFH30083.1| ras-related protein Rab-9B [Macaca mulatta]
gi|444520574|gb|ELV13029.1| Ras-related protein Rab-9B [Tupaia chinensis]
Length = 201
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 97/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|7705963|ref|NP_057454.1| ras-related protein Rab-9B [Homo sapiens]
gi|332861334|ref|XP_003317649.1| PREDICTED: ras-related protein Rab-9B [Pan troglodytes]
gi|397497810|ref|XP_003819697.1| PREDICTED: ras-related protein Rab-9B [Pan paniscus]
gi|410989082|ref|XP_004000796.1| PREDICTED: ras-related protein Rab-9B isoform 1 [Felis catus]
gi|410989084|ref|XP_004000797.1| PREDICTED: ras-related protein Rab-9B isoform 2 [Felis catus]
gi|13124471|sp|Q9NP90.1|RAB9B_HUMAN RecName: Full=Ras-related protein Rab-9B; AltName: Full=Rab-9-like
protein; Short=Rab-9L
gi|6716128|dbj|BAA89542.1| RAB9-like protein [Homo sapiens]
gi|62739495|gb|AAH93756.1| RAB9B, member RAS oncogene family [Homo sapiens]
gi|62739957|gb|AAH93758.1| RAB9B, member RAS oncogene family [Homo sapiens]
gi|119575076|gb|EAW54689.1| RAB9B, member RAS oncogene family [Homo sapiens]
gi|189066670|dbj|BAG36217.1| unnamed protein product [Homo sapiens]
gi|208968715|dbj|BAG74196.1| RAB9B, member RAS oncogene family [synthetic construct]
Length = 201
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 97/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|348570462|ref|XP_003471016.1| PREDICTED: ras-related protein Rab-9B-like [Cavia porcellus]
Length = 201
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 97/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|115495755|ref|NP_001069009.1| ras-related protein Rab-9B [Bos taurus]
gi|426257809|ref|XP_004022515.1| PREDICTED: ras-related protein Rab-9B [Ovis aries]
gi|111305127|gb|AAI20256.1| RAB9B, member RAS oncogene family [Bos taurus]
gi|296470973|tpg|DAA13088.1| TPA: RAB9B, member RAS oncogene family [Bos taurus]
gi|440902539|gb|ELR53321.1| Ras-related protein Rab-9B [Bos grunniens mutus]
Length = 201
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 97/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|157824109|ref|NP_001102488.1| ras-related protein Rab-9B [Rattus norvegicus]
gi|149033183|gb|EDL87990.1| rCG56886 [Rattus norvegicus]
Length = 201
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 97/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|395860483|ref|XP_003802542.1| PREDICTED: ras-related protein Rab-9B [Otolemur garnettii]
Length = 201
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 97/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|311276715|ref|XP_003135320.1| PREDICTED: ras-related protein Rab-9B-like [Sus scrofa]
Length = 201
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 97/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|354499882|ref|XP_003512033.1| PREDICTED: ras-related protein Rab-9B-like [Cricetulus griseus]
Length = 201
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 97/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|118089366|ref|XP_001232252.1| PREDICTED: ras-related protein Rab-9B isoform 1 [Gallus gallus]
gi|118089368|ref|XP_001232274.1| PREDICTED: ras-related protein Rab-9B isoform 2 [Gallus gallus]
gi|118089370|ref|XP_420182.2| PREDICTED: ras-related protein Rab-9B isoform 3 [Gallus gallus]
Length = 201
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 97/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL+NW++EF+ A DP+ FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFVYYADVKDPERFPFVV 121
Query: 123 LGNKID 128
LGNKID
Sbjct: 122 LGNKID 127
>gi|122921516|pdb|2OCB|A Chain A, Crystal Structure Of Human Rab9b In Complex With A Gtp
Analogue
Length = 180
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 97/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|449266697|gb|EMC77718.1| Ras-related protein Rab-9A [Columba livia]
Length = 201
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 97/126 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK+SLMN+YV KF Q TIG +FL KE++ + T+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKELEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVD 130
NK+D+D
Sbjct: 124 NKVDID 129
>gi|348541313|ref|XP_003458131.1| PREDICTED: ras-related protein Rab-9A-like [Oreochromis niloticus]
Length = 203
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 100/139 (71%), Gaps = 5/139 (3%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ TLLKVI+LGD GVGK+SLMN+YV KF + TIG +FL KE++ + R TLQIWDT
Sbjct: 4 KSTLLKVILLGDGGVGKSSLMNRYVTNKFDSHLFHTIGVEFLNKELEVDGRRVTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + ++ +SF NL NW++EF A DPD+FPFVVLG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSLDDGQSFQNLANWKKEFTYYADIKDPDSFPFVVLG 123
Query: 125 NKID-----VDGGNSRVVC 138
NK+D V G ++R C
Sbjct: 124 NKLDIPERQVSGEDARKWC 142
>gi|432109697|gb|ELK33773.1| Ras-related protein Rab-9A [Myotis davidii]
Length = 201
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 96/126 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL KE++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NLNNW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLNNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVD 130
NKID++
Sbjct: 124 NKIDIN 129
>gi|224042776|ref|XP_002197799.1| PREDICTED: ras-related protein Rab-9A [Taeniopygia guttata]
Length = 201
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 96/126 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK SLMN+YV KF Q TIG +FL KE++ + T+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKISLMNRYVTNKFDAQLFHTIGVEFLNKELEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVD 130
NK+D+D
Sbjct: 124 NKVDID 129
>gi|327264293|ref|XP_003216948.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Anolis
carolinensis]
Length = 199
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 98/126 (77%), Gaps = 2/126 (1%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
RR+ LK++++G+SG GK++LMNQYVN +FS++Y+ATIG+DFL+K+V + R+ T+QIWDT
Sbjct: 3 RRSHLKILLIGNSGAGKSALMNQYVNNRFSSRYRATIGSDFLSKQVHIDGRMLTVQIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG ERFQ+LG A YRG+DCC+LV+DV S SF L+ W ++ L+Q + FP V+G
Sbjct: 63 AGTERFQALGTALYRGSDCCLLVFDVTSASSFQALDKWHKQLLLQI--EEQSAFPIAVIG 120
Query: 125 NKIDVD 130
NK D++
Sbjct: 121 NKTDLE 126
>gi|354493933|ref|XP_003509094.1| PREDICTED: ras-related protein Rab-9A-like [Cricetulus griseus]
gi|344242371|gb|EGV98474.1| Ras-related protein Rab-9A [Cricetulus griseus]
Length = 201
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 99/137 (72%), Gaps = 3/137 (2%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NLNNW++EFL A +P++FPFVVLG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLNNWKKEFLYYADVKEPESFPFVVLG 123
Query: 125 NKIDVDGGNSRVVCFGE 141
NK+D+ N R V E
Sbjct: 124 NKVDI---NERQVSIEE 137
>gi|291190162|ref|NP_001167341.1| ras-related protein Rab-9A [Salmo salar]
gi|223649322|gb|ACN11419.1| Ras-related protein Rab-9A [Salmo salar]
Length = 201
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK+SLMN+YV KF TIG +FL K+++ + RL T+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDTHLFHTIGVEFLNKDLEVDGRLVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A +P+ FPFVVLG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDNQSFHNLANWKKEFIYYADVKEPEKFPFVVLG 123
Query: 125 NKIDV 129
NK+DV
Sbjct: 124 NKVDV 128
>gi|301784154|ref|XP_002927492.1| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Ailuropoda
melanoleuca]
Length = 206
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 97/129 (75%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
+P + +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+Q
Sbjct: 5 LPRGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQ 64
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPF
Sbjct: 65 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF 124
Query: 121 VVLGNKIDV 129
V+LGNKID+
Sbjct: 125 VILGNKIDI 133
>gi|328868244|gb|EGG16622.1| hypothetical protein DFA_07600 [Dictyostelium fasciculatum]
Length = 224
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 113/156 (72%), Gaps = 13/156 (8%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRL-----FT 58
+++ L K+I++G SGVGKTSL++QYV+K++ Q+KATIG DFLTK++Q +D T
Sbjct: 12 QKKYLFKIILIGSSGVGKTSLLSQYVHKRYIQQHKATIGVDFLTKDLQLKDSKGETCSVT 71
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN- 117
LQIWDTAGQERFQSLG AFYRGADCCVL YDVN SF+NL+ W+ +F+ QA+PS P +
Sbjct: 72 LQIWDTAGQERFQSLGSAFYRGADCCVLTYDVNDQTSFENLDRWKNDFIHQAAPSSPSSS 131
Query: 118 ---FPFVVLGNKIDVDGGNSRVVCFGEEGSSMVCLQ 150
+ VV+GNKID++ N R C ++ + C +
Sbjct: 132 PIPYQLVVIGNKIDME--NQR--CVSQKRAQAWCTE 163
>gi|339247517|ref|XP_003375392.1| GTP-binding protein YPT7 [Trichinella spiralis]
gi|316971272|gb|EFV55074.1| GTP-binding protein YPT7 [Trichinella spiralis]
Length = 146
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/90 (81%), Positives = 83/90 (92%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK+V +DR T+Q
Sbjct: 1 MATRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDVVVDDRFVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDV 90
IWDTAGQERFQSLGVAFYRGADCCVL+ ++
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLILNI 90
>gi|113676266|ref|NP_001038931.1| ras-related protein Rab-9A [Danio rerio]
gi|339715149|ref|NP_001229903.1| ras-related protein Rab-9A [Danio rerio]
gi|112419160|gb|AAI22265.1| Zgc:153391 [Danio rerio]
gi|182889508|gb|AAI65268.1| Zgc:153391 protein [Danio rerio]
Length = 201
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 96/127 (75%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLKVI+LGD GVGK+SLMN+YV KF TIG +FL K+++ + R TLQIW
Sbjct: 2 SSKSSLLKVILLGDGGVGKSSLMNRYVTNKFDAHLFHTIGVEFLNKDLEVDGRTVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A +P++FPFVV
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFHNLVNWKKEFIYYADVKEPESFPFVV 121
Query: 123 LGNKIDV 129
LGNK+DV
Sbjct: 122 LGNKLDV 128
>gi|395840533|ref|XP_003793110.1| PREDICTED: ras-related protein Rab-9A [Otolemur garnettii]
Length = 265
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 97/126 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + L T+QIWDT
Sbjct: 68 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHLVTMQIWDT 127
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 128 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 187
Query: 125 NKIDVD 130
NKID++
Sbjct: 188 NKIDIN 193
>gi|431909795|gb|ELK12941.1| Ras-related protein Rab-9A [Pteropus alecto]
Length = 218
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 21 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 80
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NLNNW++EF+ A +P++FPFV+LG
Sbjct: 81 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLNNWKKEFIYYADVKEPESFPFVILG 140
Query: 125 NKIDV 129
NK+D+
Sbjct: 141 NKVDI 145
>gi|221105634|ref|XP_002161676.1| PREDICTED: ras-related protein Rab-9B-like [Hydra magnipapillata]
Length = 209
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 103/149 (69%), Gaps = 3/149 (2%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ LKVIILGD VGK++LMN++VN KF +Q TIG +FL KEV+ +TLQIWDT
Sbjct: 4 KPNFLKVIILGDGAVGKSALMNRFVNNKFDSQSFHTIGVEFLNKEVKVSGDTYTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+D C+LVY V+ +SF NL+ W+ EFL A SDPD+FPFVVLG
Sbjct: 64 AGQERFKSLRTPFYRGSDICLLVYAVDDEQSFYNLDMWKREFLYYADVSDPDSFPFVVLG 123
Query: 125 NKIDVDGGN---SRVVCFGEEGSSMVCLQ 150
NK+D++ R + + +M+C +
Sbjct: 124 NKLDLENHEVTLERAQTWCQAKGNMICFE 152
>gi|390358987|ref|XP_003729379.1| PREDICTED: ras-related protein Rab-9A-like [Strongylocentrotus
purpuratus]
Length = 207
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 98/136 (72%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R LLKV+ILGD GVGK+SLMN++V+ KF + TIG +FL K++ E FT+Q
Sbjct: 1 MAGSRPMLLKVVILGDGGVGKSSLMNRFVSNKFEQESFHTIGVEFLNKDIVVEGETFTVQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+SL FYRG+DCC+L Y V+ +SF NL W++EFL A +D +NFPF
Sbjct: 61 IWDTAGQERFKSLRTPFYRGSDCCMLTYGVDDRQSFHNLTMWKKEFLYYADIADGENFPF 120
Query: 121 VVLGNKIDVDGGNSRV 136
V+LGNK+DV+ +V
Sbjct: 121 VLLGNKVDVESDKRQV 136
>gi|302564661|ref|NP_001181837.1| ras-related protein Rab-9A [Macaca mulatta]
gi|297303344|ref|XP_001116851.2| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Macaca
mulatta]
gi|297303348|ref|XP_002806190.1| PREDICTED: ras-related protein Rab-9A-like isoform 3 [Macaca
mulatta]
gi|402909528|ref|XP_003917469.1| PREDICTED: ras-related protein Rab-9A [Papio anubis]
gi|49036027|gb|AAT48712.1| RAS-related GTP binding protein [Chlorocebus aethiops]
gi|90079749|dbj|BAE89554.1| unnamed protein product [Macaca fascicularis]
gi|355559482|gb|EHH16210.1| Ras-related protein Rab-9A [Macaca mulatta]
gi|355757191|gb|EHH60716.1| Ras-related protein Rab-9A [Macaca fascicularis]
gi|380818058|gb|AFE80903.1| ras-related protein Rab-9A [Macaca mulatta]
gi|383410997|gb|AFH28712.1| ras-related protein Rab-9A [Macaca mulatta]
gi|384950394|gb|AFI38802.1| ras-related protein Rab-9A [Macaca mulatta]
Length = 201
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +PD+FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPDSFPFVILG 123
Query: 125 NKIDV 129
NKID+
Sbjct: 124 NKIDI 128
>gi|417408606|gb|JAA50847.1| Putative ras-related protein rab-9a, partial [Desmodus rotundus]
Length = 202
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL KE++ + T+QIWDT
Sbjct: 5 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKELEVDGHFVTMQIWDT 64
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 65 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 124
Query: 125 NKIDV 129
NKID+
Sbjct: 125 NKIDI 129
>gi|320166438|gb|EFW43337.1| Rab9a protein [Capsaspora owczarzaki ATCC 30864]
Length = 211
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 96/131 (73%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ LLKV+ILGD GVGK+SLMN++VN +F Q TIG +FL K V + +TLQIWDT
Sbjct: 15 KSVLLKVVILGDGGVGKSSLMNRFVNNEFDAQSFHTIGVEFLNKVVALNNESYTLQIWDT 74
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRGADCC+LV+ ++ +SF NL W++EFL A +DP++FPFVV+G
Sbjct: 75 AGQERFKSLRTPFYRGADCCLLVFGIDDEQSFRNLTMWKKEFLYYADVADPEHFPFVVVG 134
Query: 125 NKIDVDGGNSR 135
NKIDV R
Sbjct: 135 NKIDVRARQVR 145
>gi|260812277|ref|XP_002600847.1| hypothetical protein BRAFLDRAFT_121119 [Branchiostoma floridae]
gi|229286137|gb|EEN56859.1| hypothetical protein BRAFLDRAFT_121119 [Branchiostoma floridae]
Length = 198
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKV++LGD GVGK+SLMN++V KF +Q TIG +FL K++ + FTLQIWDT
Sbjct: 3 KSSLLKVVLLGDGGVGKSSLMNRFVTDKFDSQSFHTIGVEFLNKDIVVDGEGFTLQIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRGADCC+L + +N ++SF NL W++EFL A DPDNFPFVVLG
Sbjct: 63 AGQERFKSLRTPFYRGADCCLLTFALNDVQSFKNLGMWKKEFLYYADVRDPDNFPFVVLG 122
Query: 125 NKIDV 129
NK D+
Sbjct: 123 NKCDM 127
>gi|56711266|ref|NP_001008678.1| ras-related protein Rab-9A [Gallus gallus]
gi|326913634|ref|XP_003203141.1| PREDICTED: ras-related protein Rab-9A-like [Meleagris gallopavo]
gi|53127350|emb|CAG31058.1| hypothetical protein RCJMB04_1p1 [Gallus gallus]
Length = 201
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 97/126 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + TLQIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVD 130
NK+D++
Sbjct: 124 NKVDIN 129
>gi|395526957|ref|XP_003765620.1| PREDICTED: ras-related protein Rab-9A [Sarcophilus harrisii]
Length = 202
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 98/129 (75%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + + +L KVI+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+Q
Sbjct: 1 MMAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFESQLFHTIGVEFLNKDLEVDGHFVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPF
Sbjct: 61 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF 120
Query: 121 VVLGNKIDV 129
V+LGNKID+
Sbjct: 121 VILGNKIDI 129
>gi|345327021|ref|XP_003431118.1| PREDICTED: ras-related protein Rab-9A-like [Ornithorhynchus
anatinus]
Length = 201
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 95/126 (75%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A +PD+FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLGNWKKEFIYYADVKEPDSFPFVILG 123
Query: 125 NKIDVD 130
NKID++
Sbjct: 124 NKIDIN 129
>gi|405978301|gb|EKC42702.1| Ras-related protein Rab-9A [Crassostrea gigas]
Length = 205
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 98/128 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S++ LLKV++LGD GVGK+SLMN++V+ KF Q TIG +FL K+V +E +T+QIW
Sbjct: 2 SQKSKLLKVVLLGDGGVGKSSLMNRFVSNKFDAQSFHTIGVEFLNKDVTYEGENYTMQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ ++SF NL W++EFL A D +NFPFV+
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFAVDDIQSFKNLAMWKKEFLYYADIQDGNNFPFVI 121
Query: 123 LGNKIDVD 130
LGNKID++
Sbjct: 122 LGNKIDME 129
>gi|327268250|ref|XP_003218911.1| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Anolis
carolinensis]
gi|327268252|ref|XP_003218912.1| PREDICTED: ras-related protein Rab-9A-like isoform 2 [Anolis
carolinensis]
Length = 201
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 94/125 (75%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK+S+MN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSIMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A DP+ FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLGNWKKEFIYYADVKDPETFPFVILG 123
Query: 125 NKIDV 129
NK+D+
Sbjct: 124 NKVDI 128
>gi|156365727|ref|XP_001626795.1| predicted protein [Nematostella vectensis]
gi|156213684|gb|EDO34695.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 98/129 (75%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + TLLKV++LGD GVGK+SLMN++V KF Q TIG +FL K+V+ + +TLQIW
Sbjct: 2 SGKSTLLKVVLLGDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+D C+LVY V+ KSF NL+ W++EFL A D +NFPF++
Sbjct: 62 DTAGQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQENFPFIL 121
Query: 123 LGNKIDVDG 131
LGNK+DV+G
Sbjct: 122 LGNKVDVEG 130
>gi|355714983|gb|AES05185.1| RAB9A, member RAS oncoprotein family [Mustela putorius furo]
Length = 207
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 11 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 70
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 71 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 130
Query: 125 NKIDV 129
NKID+
Sbjct: 131 NKIDI 135
>gi|348554563|ref|XP_003463095.1| PREDICTED: ras-related protein Rab-9A-like [Cavia porcellus]
Length = 201
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 96/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDV 129
NK+D+
Sbjct: 124 NKVDI 128
>gi|125834658|ref|XP_001339262.1| PREDICTED: ras-related protein Rab-9B-like [Danio rerio]
Length = 202
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 96/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV +F +Q TIG +FL ++++ + RL TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTDRFDSQSFHTIGVEFLNRDLEIDGRLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ ++SF NL W++EF+ + DP+ FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFAVDDLQSFQNLGCWKKEFMYYSDVRDPERFPFVV 121
Query: 123 LGNKID 128
LGNK+D
Sbjct: 122 LGNKVD 127
>gi|347922198|ref|NP_001231676.1| RAB9A, member RAS oncogene family [Sus scrofa]
Length = 201
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDV 129
NKID+
Sbjct: 124 NKIDI 128
>gi|332223877|ref|XP_003261094.1| PREDICTED: ras-related protein Rab-9A isoform 5 [Nomascus
leucogenys]
Length = 217
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 20 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 79
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 80 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 139
Query: 125 NKIDV 129
NKID+
Sbjct: 140 NKIDI 144
>gi|301784156|ref|XP_002927493.1| PREDICTED: ras-related protein Rab-9A-like isoform 2 [Ailuropoda
melanoleuca]
gi|281340951|gb|EFB16535.1| hypothetical protein PANDA_017274 [Ailuropoda melanoleuca]
Length = 201
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDV 129
NKID+
Sbjct: 124 NKIDI 128
>gi|410056201|ref|XP_003953982.1| PREDICTED: ras-related protein Rab-9A [Pan troglodytes]
gi|426395194|ref|XP_004063860.1| PREDICTED: ras-related protein Rab-9A isoform 5 [Gorilla gorilla
gorilla]
Length = 217
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 20 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 79
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 80 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 139
Query: 125 NKIDV 129
NKID+
Sbjct: 140 NKIDI 144
>gi|126336882|ref|XP_001364867.1| PREDICTED: ras-related protein Rab-9A-like [Monodelphis domestica]
Length = 201
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 96/126 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFESQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLGNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDVD 130
NKID++
Sbjct: 124 NKIDIN 129
>gi|410988098|ref|XP_004000325.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Felis catus]
gi|410988100|ref|XP_004000326.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Felis catus]
Length = 201
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDV 129
NKID+
Sbjct: 124 NKIDI 128
>gi|308044530|ref|NP_001183960.1| ras-related protein Rab-9A [Canis lupus familiaris]
gi|149744245|ref|XP_001489036.1| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Equus
caballus]
gi|332223869|ref|XP_003261090.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Nomascus
leucogenys]
gi|332223871|ref|XP_003261091.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Nomascus
leucogenys]
gi|332223873|ref|XP_003261092.1| PREDICTED: ras-related protein Rab-9A isoform 3 [Nomascus
leucogenys]
gi|332223875|ref|XP_003261093.1| PREDICTED: ras-related protein Rab-9A isoform 4 [Nomascus
leucogenys]
gi|338729185|ref|XP_003365840.1| PREDICTED: ras-related protein Rab-9A-like [Equus caballus]
gi|585773|sp|P24408.2|RAB9A_CANFA RecName: Full=Ras-related protein Rab-9A
gi|335773329|gb|AEH58356.1| Ras-related protein Rab-9A-like protein [Equus caballus]
Length = 201
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDV 129
NKID+
Sbjct: 124 NKIDI 128
>gi|4759012|ref|NP_004242.1| ras-related protein Rab-9A [Homo sapiens]
gi|305855090|ref|NP_001182257.1| ras-related protein Rab-9A [Homo sapiens]
gi|55662400|ref|XP_520935.1| PREDICTED: ras-related protein Rab-9A isoform 3 [Pan troglodytes]
gi|296234923|ref|XP_002762672.1| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Callithrix
jacchus]
gi|296234925|ref|XP_002762673.1| PREDICTED: ras-related protein Rab-9A-like isoform 2 [Callithrix
jacchus]
gi|332860283|ref|XP_003317395.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Pan troglodytes]
gi|332860286|ref|XP_003317396.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Pan troglodytes]
gi|397468114|ref|XP_003805740.1| PREDICTED: ras-related protein Rab-9A [Pan paniscus]
gi|403255296|ref|XP_003920377.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Saimiri
boliviensis boliviensis]
gi|403255298|ref|XP_003920378.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Saimiri
boliviensis boliviensis]
gi|403255300|ref|XP_003920379.1| PREDICTED: ras-related protein Rab-9A isoform 3 [Saimiri
boliviensis boliviensis]
gi|403255302|ref|XP_003920380.1| PREDICTED: ras-related protein Rab-9A isoform 4 [Saimiri
boliviensis boliviensis]
gi|410056199|ref|XP_003953981.1| PREDICTED: ras-related protein Rab-9A [Pan troglodytes]
gi|426395186|ref|XP_004063856.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Gorilla gorilla
gorilla]
gi|426395188|ref|XP_004063857.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Gorilla gorilla
gorilla]
gi|426395190|ref|XP_004063858.1| PREDICTED: ras-related protein Rab-9A isoform 3 [Gorilla gorilla
gorilla]
gi|426395192|ref|XP_004063859.1| PREDICTED: ras-related protein Rab-9A isoform 4 [Gorilla gorilla
gorilla]
gi|1710003|sp|P51151.1|RAB9A_HUMAN RecName: Full=Ras-related protein Rab-9A
gi|20379064|gb|AAM21092.1|AF498944_1 small GTP binding protein RAB9 [Homo sapiens]
gi|1174147|gb|AAC51200.1| small GTP binding protein Rab9 [Homo sapiens]
gi|16878118|gb|AAH17265.1| RAB9A, member RAS oncogene family [Homo sapiens]
gi|47496671|emb|CAG29358.1| RAB9A [Homo sapiens]
gi|60819204|gb|AAX36492.1| RAB9A member RAS oncogene family [synthetic construct]
gi|119619232|gb|EAW98826.1| RAB9A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119619233|gb|EAW98827.1| RAB9A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119619234|gb|EAW98828.1| RAB9A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123986037|gb|ABM83750.1| RAB9A, member RAS oncogene family [synthetic construct]
gi|123998960|gb|ABM87069.1| RAB9A, member RAS oncogene family [synthetic construct]
gi|158254442|dbj|BAF83194.1| unnamed protein product [Homo sapiens]
gi|208968713|dbj|BAG74195.1| RAB9A, member RAS oncogene family [synthetic construct]
gi|410215528|gb|JAA04983.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410215530|gb|JAA04984.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410267604|gb|JAA21768.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410267606|gb|JAA21769.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410298884|gb|JAA28042.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410298886|gb|JAA28043.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410329113|gb|JAA33503.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410329115|gb|JAA33504.1| RAB9A, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDV 129
NKID+
Sbjct: 124 NKIDI 128
>gi|432933159|ref|XP_004081834.1| PREDICTED: ras-related protein Rab-9A-like [Oryzias latipes]
Length = 201
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 95/127 (74%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ + +LLKVI+LGD GVGK+S+MN+YV KF TIG +FL K+++ + R TLQIW
Sbjct: 2 TTKTSLLKVILLGDGGVGKSSIMNRYVTNKFDAHLFHTIGVEFLNKDLEVDSRQVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A +P+ FPFVV
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDHQSFLNLGNWKKEFIYYADVKEPEKFPFVV 121
Query: 123 LGNKIDV 129
LGNK+DV
Sbjct: 122 LGNKVDV 128
>gi|50513508|pdb|1S8F|A Chain A, Crystal Structure Of Rab9 Complexed To Gdp Reveals A Dimer
With An Active Conformation Of Switch Ii
gi|50513509|pdb|1S8F|B Chain B, Crystal Structure Of Rab9 Complexed To Gdp Reveals A Dimer
With An Active Conformation Of Switch Ii
Length = 177
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 6 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 65
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 66 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 125
Query: 125 NKIDV 129
NKID+
Sbjct: 126 NKIDI 130
>gi|55670683|pdb|1WMS|A Chain A, High Resolution Crystal Structure Of Human Rab9 Gtpase: A
Novel Antiviral Drug Target
gi|55670684|pdb|1WMS|B Chain B, High Resolution Crystal Structure Of Human Rab9 Gtpase: A
Novel Antiviral Drug Target
Length = 177
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDV 129
NKID+
Sbjct: 124 NKIDI 128
>gi|60654349|gb|AAX29865.1| RAB9A member RAS oncogene family [synthetic construct]
gi|60830658|gb|AAX36939.1| RAB9A member RAS oncogene family [synthetic construct]
Length = 202
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDV 129
NKID+
Sbjct: 124 NKIDI 128
>gi|326918884|ref|XP_003205715.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-9B-like
[Meleagris gallopavo]
Length = 201
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 96/126 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL F +GADCC+L + V+ +SF+NL+NW++EF+ A DP+ FPFVV
Sbjct: 62 DTAGQERFKSLRTPFLQGADCCLLTFSVDDRQSFENLSNWQKEFVYYADVKDPERFPFVV 121
Query: 123 LGNKID 128
LGNKID
Sbjct: 122 LGNKID 127
>gi|410906169|ref|XP_003966564.1| PREDICTED: ras-related protein Rab-9A-like [Takifugu rubripes]
Length = 201
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 94/125 (75%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ L+KVI+LGD GVGK+SLMN+YV KF + TIG +FL KE++ + + TLQIWDT
Sbjct: 4 KSALVKVILLGDGGVGKSSLMNRYVTNKFDSHLFHTIGVEFLNKELEVDGQQVTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + ++ +SF NL NW++EF A DPDNFPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSLDDGQSFRNLANWKKEFTYYADIKDPDNFPFVLLG 123
Query: 125 NKIDV 129
NK+DV
Sbjct: 124 NKVDV 128
>gi|291236009|ref|XP_002737937.1| PREDICTED: RAB9, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 205
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 96/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ LLKV+ILGD GVGK+SLMN++++ KF +Q TIG +FL K++ + +TLQIWDT
Sbjct: 4 KTQLLKVVILGDGGVGKSSLMNRFISNKFDSQSFHTIGVEFLNKDIVIDGHSYTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ ++SF NLN W++EFL A D D+FPFVVLG
Sbjct: 64 AGQERFKSLRTPFYRGSDCCLLTFGVDDVQSFHNLNMWKKEFLYYADVKDGDSFPFVVLG 123
Query: 125 NKIDV 129
NK+DV
Sbjct: 124 NKVDV 128
>gi|432878834|ref|XP_004073408.1| PREDICTED: ras-related protein Rab-9B-like [Oryzias latipes]
Length = 202
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 95/128 (74%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV +F +Q TIG +FL +++ + RL TLQIW
Sbjct: 2 SGKNLLLKVILLGDGGVGKSSLMNRYVTDRFDSQSFHTIGVEFLNRDMVVDGRLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + VN +SF NLN W+ EF+ + DP+ F FVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFAVNDSRSFQNLNCWKREFINYSDVKDPERFSFVV 121
Query: 123 LGNKIDVD 130
LGNK+DV+
Sbjct: 122 LGNKVDVE 129
>gi|71026212|ref|XP_762790.1| small GTP-binding protein Rab7 [Theileria parva strain Muguga]
gi|68349742|gb|EAN30507.1| small GTP-binding protein rab7, putative [Theileria parva]
Length = 192
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 89/112 (79%), Gaps = 1/112 (0%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MNQ++NK+F+NQY+ATIGADFLT + +D+ TLQIWDTAGQERFQSLG AFYRGAD C
Sbjct: 1 MNQFINKRFTNQYRATIGADFLTMGITVDDKEVTLQIWDTAGQERFQSLGTAFYRGADGC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRV 136
+LVYD + K+F+++ +W+ EFLIQ P PD FPF ++GNKID D N +V
Sbjct: 61 MLVYDTTNQKTFESIESWKSEFLIQIDPKSPDTFPFALVGNKID-DTENKKV 111
>gi|195331478|ref|XP_002032428.1| GM26547 [Drosophila sechellia]
gi|194121371|gb|EDW43414.1| GM26547 [Drosophila sechellia]
Length = 175
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 90/130 (69%), Gaps = 32/130 (24%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R+++LLKVIILGDS VGKTSLMNQY
Sbjct: 1 MSGRKKSLLKVIILGDSSVGKTSLMNQY-------------------------------- 28
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDV + SF NL++WR+EFLIQASP DP++FPF
Sbjct: 29 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPF 88
Query: 121 VVLGNKIDVD 130
VVLGNK+D+D
Sbjct: 89 VVLGNKVDLD 98
>gi|344288599|ref|XP_003416035.1| PREDICTED: ras-related protein Rab-9A-like [Loxodonta africana]
Length = 201
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDV 129
NK+D+
Sbjct: 124 NKVDI 128
>gi|115495801|ref|NP_001069006.1| ras-related protein Rab-9A [Bos taurus]
gi|240849325|ref|NP_001155342.1| ras-related protein Rab-9A [Ovis aries]
gi|115305150|gb|AAI23544.1| RAB9A, member RAS oncogene family [Bos taurus]
gi|238566792|gb|ACR46633.1| RAB9A [Ovis aries]
gi|296470467|tpg|DAA12582.1| TPA: RAB9A, member RAS oncogene family [Bos taurus]
gi|440911121|gb|ELR60837.1| Ras-related protein Rab-9A [Bos grunniens mutus]
Length = 203
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDV 129
NK+D+
Sbjct: 124 NKVDI 128
>gi|167385403|ref|XP_001737332.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899904|gb|EDR26390.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 201
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 96/128 (75%), Gaps = 2/128 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S R LLK I+LG S VGKT+L++++VN+KF+N YKATIGADF+TK + E + T+Q
Sbjct: 1 MSSSR--LLKTILLGSSNVGKTALIHRFVNQKFTNSYKATIGADFMTKSITVEGKEVTMQ 58
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
WDTAG ERF SL +AFYRGADCC LV+DV++ KSF+ L W+ EFL + + FPF
Sbjct: 59 TWDTAGNERFISLSIAFYRGADCCGLVFDVSNPKSFEQLTMWKNEFLKNCTTNKNGKFPF 118
Query: 121 VVLGNKID 128
V++GNKID
Sbjct: 119 VIIGNKID 126
>gi|403344496|gb|EJY71594.1| GTP-binding protein [Oxytricha trifallax]
gi|403370683|gb|EJY85209.1| GTP-binding protein [Oxytricha trifallax]
Length = 246
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 105/148 (70%), Gaps = 4/148 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP ++ +KV+ +GDSGVGKTSL+ + + +F+ +K TIGADF KEV ++ TLQ
Sbjct: 26 MPEKK-CFVKVVAIGDSGVGKTSLIQMFEHSRFTEAFKPTIGADFSNKEVSINGKIVTLQ 84
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQER+QSLG AFYRGADCC++ YD+++ SF+N+ W++ F+ + +P+ FPF
Sbjct: 85 IWDTAGQERYQSLGTAFYRGADCCLIAYDLSNSSSFENITQWKQSFMQKGMIVNPETFPF 144
Query: 121 VVLGNKIDVDGGNSRVVCFGEEGSSMVC 148
+++GNK+D+ +SR V E+ + C
Sbjct: 145 MIVGNKLDI-AEDSRQV--SEQAAKRYC 169
>gi|432850525|ref|XP_004066796.1| PREDICTED: ras-related protein Rab-9A-like [Oryzias latipes]
Length = 200
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 93/125 (74%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ LLKVI+LGD GVGK+SLMN+YV KF + TIG +FL KE++ + R TLQIWDT
Sbjct: 3 KSALLKVILLGDGGVGKSSLMNRYVTNKFDSHLFHTIGVEFLNKELEVDGRRVTLQIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + ++ +SF NL NW++EF A D D+FPF+VLG
Sbjct: 63 AGQERFRSLRTPFYRGSDCCLLTFSLDDGQSFSNLANWKKEFSFYADVKDADHFPFLVLG 122
Query: 125 NKIDV 129
NK+DV
Sbjct: 123 NKLDV 127
>gi|9790227|ref|NP_062747.1| ras-related protein Rab-9A [Mus musculus]
gi|46577134|sp|Q9R0M6.1|RAB9A_MOUSE RecName: Full=Ras-related protein Rab-9A; AltName: Full=Sid 99
gi|5931616|dbj|BAA84709.1| small GTP binding protein [Mus musculus]
gi|12846351|dbj|BAB27135.1| unnamed protein product [Mus musculus]
gi|12856474|dbj|BAB30681.1| unnamed protein product [Mus musculus]
gi|14919428|gb|AAH08160.1| RAB9, member RAS oncogene family [Mus musculus]
gi|26327959|dbj|BAC27720.1| unnamed protein product [Mus musculus]
gi|112292973|dbj|BAF02864.1| Rab9A [Mus musculus]
gi|148708778|gb|EDL40725.1| mCG116026, isoform CRA_a [Mus musculus]
gi|148708779|gb|EDL40726.1| mCG116026, isoform CRA_a [Mus musculus]
gi|148708780|gb|EDL40727.1| mCG116026, isoform CRA_a [Mus musculus]
gi|148708781|gb|EDL40728.1| mCG116026, isoform CRA_a [Mus musculus]
Length = 201
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDV 129
NK D+
Sbjct: 124 NKTDI 128
>gi|410914068|ref|XP_003970510.1| PREDICTED: ras-related protein Rab-9B-like [Takifugu rubripes]
Length = 202
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 96/128 (75%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV F +Q TIG +FL ++++ + RL TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTDCFDSQSFHTIGVEFLNRDLEVDGRLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + VN ++SF NL W++EF+ + P+ FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFAVNDLQSFQNLGCWKKEFMYYSDVKVPERFPFVV 121
Query: 123 LGNKIDVD 130
LGNK+D++
Sbjct: 122 LGNKVDME 129
>gi|62906854|sp|Q99P75.2|RAB9A_RAT RecName: Full=Ras-related protein Rab-9A
gi|47124150|gb|AAH70502.1| RAB9A, member RAS oncogene family [Rattus norvegicus]
gi|149035885|gb|EDL90552.1| RAB9, member RAS oncogene family, isoform CRA_a [Rattus norvegicus]
Length = 201
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDV 129
NK D+
Sbjct: 124 NKTDI 128
>gi|73535737|pdb|1YZL|A Chain A, Gppnhp-Bound Rab9 Gtpase
Length = 179
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDT
Sbjct: 8 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 67
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 68 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 127
Query: 125 NKIDV 129
NK D+
Sbjct: 128 NKTDI 132
>gi|67468620|ref|XP_650338.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978612|dbj|BAD34973.1| EhRab7F protein [Entamoeba histolytica]
gi|56466959|gb|EAL44961.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|407036616|gb|EKE38267.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449702834|gb|EMD43395.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 201
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 96/128 (75%), Gaps = 2/128 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S R LLK I+LG S VGKT+L++++VN+KF+N YKATIGADF+TK + E + T+Q
Sbjct: 1 MSSSR--LLKTILLGSSNVGKTALIHRFVNQKFTNSYKATIGADFMTKSIIVEGKEVTMQ 58
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
WDTAG ERF SL +AFYRGADCC LV+DV++ KSF+ L W+ EFL + + FPF
Sbjct: 59 TWDTAGNERFISLSIAFYRGADCCGLVFDVSNPKSFEQLTMWKNEFLKNCTTNKNGKFPF 118
Query: 121 VVLGNKID 128
V++GNKID
Sbjct: 119 VIIGNKID 126
>gi|16758200|ref|NP_445910.1| ras-related protein Rab-9A [Rattus norvegicus]
gi|12240243|gb|AAG49586.1|AF325692_1 small GTP binding protein Rab9 [Rattus norvegicus]
Length = 201
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVANKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 125 NKIDV 129
NK D+
Sbjct: 124 NKTDI 128
>gi|297709437|ref|XP_002831436.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-9A [Pongo
abelii]
Length = 263
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 95/125 (76%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +L KVI+LGD GVGK+S+MN+YV K Q+ TIG +FL K+++ + T+QIWDT
Sbjct: 66 KSSLFKVILLGDGGVGKSSVMNRYVTNKXDTQFFHTIGVEFLNKDLEVDGHFVTMQIWDT 125
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LG
Sbjct: 126 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 185
Query: 125 NKIDV 129
NKID+
Sbjct: 186 NKIDI 190
>gi|198427811|ref|XP_002131619.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 206
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 93/122 (76%), Gaps = 1/122 (0%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+LKV+++GD GVGK+S+MN+++ +F Q TIG +FLTK V+ E + +TLQIWDTAGQ
Sbjct: 7 VLKVVLIGDGGVGKSSIMNRFITGEFDGQSYHTIGVEFLTKNVEVEGKQYTLQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+SL FYRGADCC+L Y VN +SF NL W++EFL A +D D FPFVVLGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCMLTYAVNDAQSFHNLKMWKQEFLYYADIND-DKFPFVVLGNKV 125
Query: 128 DV 129
DV
Sbjct: 126 DV 127
>gi|410896858|ref|XP_003961916.1| PREDICTED: ras-related protein Rab-9A-like [Takifugu rubripes]
Length = 202
Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 94/127 (74%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ + +L KVI+LGD GVGK+SLMN+YV KF TIG +FL KE++ + TLQIW
Sbjct: 2 ATKTSLQKVILLGDGGVGKSSLMNRYVTNKFDAHLFHTIGVEFLNKELEVDGHQVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P+ FPFVV
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDNQSFLNLSNWKKEFIYYADVKEPEKFPFVV 121
Query: 123 LGNKIDV 129
LGNK+DV
Sbjct: 122 LGNKLDV 128
>gi|348536070|ref|XP_003455520.1| PREDICTED: ras-related protein Rab-9A-like [Oreochromis niloticus]
Length = 202
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 94/127 (74%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ + +LLKVI+LGD GVGK+S+MN+YV KF TIG +FL K+++ + TLQIW
Sbjct: 2 TTKTSLLKVILLGDGGVGKSSIMNRYVTNKFDAHLFHTIGVEFLNKDLEVDGHQVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L + V+ +SF NL NW++EF+ A +P+ FPFVV
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDNQSFLNLGNWKKEFIYYADVKEPEKFPFVV 121
Query: 123 LGNKIDV 129
LGNK+DV
Sbjct: 122 LGNKVDV 128
>gi|47222954|emb|CAF99110.1| unnamed protein product [Tetraodon nigroviridis]
Length = 202
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 96/128 (75%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV F +Q TIG +FL ++++ + RL TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTDCFDSQSFHTIGVEFLNRDLEVDGRLVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + VN ++SF NL W++EF+ + + + FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFAVNDLQSFQNLGCWKKEFMYYSDVKNAERFPFVV 121
Query: 123 LGNKIDVD 130
LGNK+D++
Sbjct: 122 LGNKVDME 129
>gi|297801642|ref|XP_002868705.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314541|gb|EFH44964.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 222
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 99/140 (70%), Gaps = 3/140 (2%)
Query: 1 MPSR-RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTL 59
M SR +RT LK+I+LG+SGVGKTSL +Y+ ++F + T+G DF KE+ + TL
Sbjct: 34 MSSRQKRTKLKIILLGNSGVGKTSLTKRYIGEEFKRLHMNTVGMDFTNKELCVDKEQVTL 93
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNF- 118
QIWDTAGQERF S+ FYR A+CCVLVYDVN ++SF++L+ W +F+ +A P PD F
Sbjct: 94 QIWDTAGQERFHSITSGFYRDANCCVLVYDVNILESFESLDIWHAQFVEEADPITPDKFR 153
Query: 119 -PFVVLGNKIDVDGGNSRVV 137
PFV++GNK DV G S VV
Sbjct: 154 IPFVLMGNKTDVKGRTSPVV 173
>gi|327264295|ref|XP_003216949.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Anolis
carolinensis]
Length = 259
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 99/138 (71%), Gaps = 11/138 (7%)
Query: 2 PSRRRTLLKVIILGDSG---------VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF 52
P RR+ LK++++G+SG GK++LMNQYVN +FS++Y+ATIG+DFL+K+V
Sbjct: 51 PMFRRSHLKILLIGNSGSRPESFGIQAGKSALMNQYVNNRFSSRYRATIGSDFLSKQVHI 110
Query: 53 EDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASP 112
+ R+ T+QIWDTAG ERFQ+LG A YRG+DCC+LV+DV S SF L+ W ++ L+Q
Sbjct: 111 DGRMLTVQIWDTAGTERFQALGTALYRGSDCCLLVFDVTSASSFQALDKWHKQLLLQI-- 168
Query: 113 SDPDNFPFVVLGNKIDVD 130
+ FP V+GNK D++
Sbjct: 169 EEQSAFPIAVIGNKTDLE 186
>gi|440295160|gb|ELP88073.1| rab7, putative [Entamoeba invadens IP1]
Length = 200
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 98/133 (73%), Gaps = 1/133 (0%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R TL K I++GDSGVGKTSL+N+YVN +FS+ YKATIG+DFL K V + +TLQIWDT
Sbjct: 3 RPTLFKTILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVTVNGQTYTLQIWDT 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG ER+ + FYRG+DCCVL +DV + +SF++L W+ +F+ A+ ++P + P V+G
Sbjct: 63 AGHERYSCVVTTFYRGSDCCVLCFDVTNRESFNHLEKWKNDFIEGANLTNPGSVPIFVVG 122
Query: 125 NKIDVDGGNSRVV 137
NKID D N+R V
Sbjct: 123 NKIDCD-PNTREV 134
>gi|344256888|gb|EGW12992.1| Ras-related protein Rab-9B [Cricetulus griseus]
Length = 197
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 92/121 (76%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 L 123
L
Sbjct: 122 L 122
>gi|440795724|gb|ELR16841.1| GTPbinding protein YPTC5, putative [Acanthamoeba castellanii str.
Neff]
Length = 197
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/117 (66%), Positives = 92/117 (78%), Gaps = 1/117 (0%)
Query: 14 LGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSL 73
+GDSGVGKTSLM+QYVNK+F+ YKATIGADFL K+V +D++ TLQIWDTAGQERF SL
Sbjct: 18 IGDSGVGKTSLMHQYVNKQFAYSYKATIGADFLMKDVVVDDQVVTLQIWDTAGQERFFSL 77
Query: 74 GVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNF-PFVVLGNKIDV 129
G FYRG D CVLVYDV + KSF+NL NWR+E L + D PFVV+GNKID+
Sbjct: 78 GAGFYRGVDGCVLVYDVTNPKSFENLTNWRKELLHKIGGPKLDKLPPFVVIGNKIDL 134
>gi|67466321|ref|XP_649308.1| small GTP binding protein Rab7 [Entamoeba histolytica HM-1:IMSS]
gi|56465714|gb|EAL43921.1| small GTP binding protein Rab7, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56790048|dbj|BAD82820.1| small GTPase EhRab7I [Entamoeba histolytica]
gi|449710007|gb|EMD49157.1| small GTP -binding protein Rab7, putative [Entamoeba histolytica
KU27]
Length = 204
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 95/130 (73%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
TL K++ILGDS VGKTSL+ QY+ K F+ Q K+T+GADF+T+E+ + ++ LQIWDTAG
Sbjct: 6 TLFKIVILGDSSVGKTSLLQQYITKTFAEQTKSTVGADFITREIDIDGKIIALQIWDTAG 65
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
ERF SLG F+RGADCC+LV DV + +F++L++W+++ S D +NFPFV++GNK
Sbjct: 66 SERFCSLGPVFFRGADCCILVCDVTNESTFEHLDDWKKQLFQSLSFEDLNNFPFVIVGNK 125
Query: 127 IDVDGGNSRV 136
D +V
Sbjct: 126 SDCSDEERQV 135
>gi|167392605|ref|XP_001740221.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165895750|gb|EDR23368.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 204
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 92/122 (75%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
TL K++ILGDS VGKTSL+ QY+ K F+ Q K T+GADF+T+E+ + ++ LQIWDTAG
Sbjct: 6 TLFKIVILGDSSVGKTSLLQQYITKTFAEQTKTTVGADFITREIDIDGKVIALQIWDTAG 65
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
ERF SLG F+RGADCCVLV DV + +F++L++W+++ S D +NFPFVV+GNK
Sbjct: 66 SERFCSLGPVFFRGADCCVLVCDVTNESTFEHLDDWKKQLFQSLSFEDLNNFPFVVVGNK 125
Query: 127 ID 128
D
Sbjct: 126 SD 127
>gi|407043376|gb|EKE41918.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 204
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 93/132 (70%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R L K I++GDSGVGKTSL+N+YVN +FS+ YKATIG+DFL K V +TLQIWDT
Sbjct: 4 RPALFKTILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVTVNGAQYTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG ER+ + FYRG+DCCVL +DV + +SF++L W+ EF+ A+ ++P + P V+G
Sbjct: 64 AGHERYSCVVTTFYRGSDCCVLCFDVTNRESFNHLEKWKNEFIDGANATNPASIPIYVVG 123
Query: 125 NKIDVDGGNSRV 136
NKID + V
Sbjct: 124 NKIDCEPNKREV 135
>gi|196005255|ref|XP_002112494.1| hypothetical protein TRIADDRAFT_56572 [Trichoplax adhaerens]
gi|190584535|gb|EDV24604.1| hypothetical protein TRIADDRAFT_56572 [Trichoplax adhaerens]
Length = 215
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 90/122 (73%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLKVI+LGD GVGK+SLM +++ KF TIG +FL+K + +T+QIWDTAGQ
Sbjct: 9 LLKVILLGDGGVGKSSLMTRFIQDKFDENSYHTIGVEFLSKNINVNGITYTIQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++SL FYRGADCC+L + +++ SFDNL WR+EF+ A +DP+ FPFVVLGNK+
Sbjct: 69 ERYRSLRTPFYRGADCCLLTFALDNRNSFDNLATWRKEFIFYADVNDPETFPFVVLGNKV 128
Query: 128 DV 129
D+
Sbjct: 129 DI 130
>gi|328865692|gb|EGG14078.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 466
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 101/137 (73%), Gaps = 4/137 (2%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +RR +LK++I+G+ VGKTS++ +YV+++F K TIG DF+ K+V DRL TLQ
Sbjct: 261 MAGQRRKVLKIVIIGEKSVGKTSILKRYVDQRFV-PMKPTIGIDFVNKDVMVHDRLVTLQ 319
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDT+GQERF+SL +++YRGADCCVLV+DV + KS +L WR +F+ + + D FPF
Sbjct: 320 LWDTSGQERFRSLDISYYRGADCCVLVFDVTNEKSLQDLIIWRNDFIEKIGVQNQDTFPF 379
Query: 121 VVLGNKIDVDGGNSRVV 137
VVLGNK+D + SRVV
Sbjct: 380 VVLGNKVDEE---SRVV 393
>gi|67472102|ref|XP_651915.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978608|dbj|BAD34971.1| EhRab7D protein [Entamoeba histolytica]
gi|56468706|gb|EAL46529.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709825|gb|EMD49016.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 204
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 92/132 (69%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R L K I++GDSGVGKTSL+N+YVN +FS+ YKATIG+DFL K V +TLQIWDT
Sbjct: 4 RPALFKAILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVTVNGAQYTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AG ER+ + FYRG+DCCVL +DV + SF++L W+ EF+ A+ ++P + P V+G
Sbjct: 64 AGHERYSCVVTTFYRGSDCCVLCFDVTNRDSFNHLEKWKNEFIDGANATNPASIPIYVVG 123
Query: 125 NKIDVDGGNSRV 136
NKID + V
Sbjct: 124 NKIDCEPNKREV 135
>gi|443718217|gb|ELU08962.1| hypothetical protein CAPTEDRAFT_178369 [Capitella teleta]
Length = 208
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 89/121 (73%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLKV++LGD GVGK+SLMN++V+ KF Q TIG +FL K++ FTLQIWDTAGQ
Sbjct: 14 LLKVVLLGDGGVGKSSLMNRFVSNKFDTQSFHTIGVEFLNKDIIVNGETFTLQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+SL FYRGADCC+L + V+ M S NL+ W++EFL A + D FPFVVLGNK+
Sbjct: 74 ERFKSLRTPFYRGADCCLLTFGVDDMVSLKNLSLWKKEFLYYADVQEADLFPFVVLGNKV 133
Query: 128 D 128
D
Sbjct: 134 D 134
>gi|197308570|gb|ACH60636.1| rab GTPase [Pseudotsuga menziesii]
gi|197308572|gb|ACH60637.1| rab GTPase [Pseudotsuga menziesii]
gi|197308574|gb|ACH60638.1| rab GTPase [Pseudotsuga menziesii]
gi|197308576|gb|ACH60639.1| rab GTPase [Pseudotsuga menziesii]
gi|197308578|gb|ACH60640.1| rab GTPase [Pseudotsuga menziesii]
gi|197308580|gb|ACH60641.1| rab GTPase [Pseudotsuga menziesii]
gi|197308582|gb|ACH60642.1| rab GTPase [Pseudotsuga menziesii]
gi|197308584|gb|ACH60643.1| rab GTPase [Pseudotsuga menziesii]
gi|197308586|gb|ACH60644.1| rab GTPase [Pseudotsuga menziesii]
gi|197308588|gb|ACH60645.1| rab GTPase [Pseudotsuga menziesii]
gi|197308590|gb|ACH60646.1| rab GTPase [Pseudotsuga menziesii]
gi|197308592|gb|ACH60647.1| rab GTPase [Pseudotsuga menziesii]
gi|197308594|gb|ACH60648.1| rab GTPase [Pseudotsuga menziesii]
gi|197308596|gb|ACH60649.1| rab GTPase [Pseudotsuga menziesii]
gi|197308598|gb|ACH60650.1| rab GTPase [Pseudotsuga menziesii]
gi|197308600|gb|ACH60651.1| rab GTPase [Pseudotsuga menziesii]
gi|197308602|gb|ACH60652.1| rab GTPase [Pseudotsuga menziesii]
gi|197308604|gb|ACH60653.1| rab GTPase [Pseudotsuga menziesii]
Length = 84
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/78 (87%), Positives = 75/78 (96%)
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSFDNL+NWR+EFLIQA+P+DP+NFP
Sbjct: 1 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVLKSFDNLDNWRQEFLIQANPTDPENFP 60
Query: 120 FVVLGNKIDVDGGNSRVV 137
FVVLGNK DVD G+SRVV
Sbjct: 61 FVVLGNKTDVDDGHSRVV 78
>gi|340379517|ref|XP_003388273.1| PREDICTED: ras-related protein Rab-9A-like [Amphimedon
queenslandica]
Length = 202
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 93/127 (73%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + LKV++LGD GVGK+SL+ ++V+ KF TIG +FL K+++ + +TLQIW
Sbjct: 2 SSKPIFLKVVLLGDGGVGKSSLIQRFVSNKFDPSMFHTIGVEFLNKDMEVDSNRYTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+DCC+L Y V+ +SF NL W++EFL A +PD+FPF+V
Sbjct: 62 DTAGQERFKSLRTPFYRGSDCCLLTYAVDDSQSFQNLTMWKKEFLYYADVKEPDSFPFIV 121
Query: 123 LGNKIDV 129
+GNK+DV
Sbjct: 122 IGNKVDV 128
>gi|189239801|ref|XP_970534.2| PREDICTED: similar to ras-related protein Rab-7 [Tribolium
castaneum]
Length = 197
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 98/132 (74%), Gaps = 15/132 (11%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR--LFT 58
M SR++ LLKVIILGDS VGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DR L+T
Sbjct: 1 MASRKKVLLKVIILGDSSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVTVDDRTSLYT 60
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNF 118
+ +++ R V V+DV + +F +L++WR+EFLIQASP +P+NF
Sbjct: 61 V-------------CSISWQRQMLTFVSVFDVTAPNTFKSLDSWRDEFLIQASPREPENF 107
Query: 119 PFVVLGNKIDVD 130
PFV+LGNK+D++
Sbjct: 108 PFVLLGNKVDLE 119
>gi|322803055|gb|EFZ23143.1| hypothetical protein SINV_00854 [Solenopsis invicta]
Length = 1447
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 72/147 (48%), Positives = 96/147 (65%), Gaps = 3/147 (2%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+R TLLKV+ILGD GVGK+ LMN++V+ F TIG +FL K+++ +TLQIWD
Sbjct: 1239 KRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQIWD 1298
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF++L FYRG+D C+L Y V+ SF NL WR EFL A + FPF+V+
Sbjct: 1299 TAGQERFKTLRTPFYRGSDICLLTYAVDDRMSFRNLALWRSEFLKYADVQEGSTFPFIVV 1358
Query: 124 GNKIDVDGGNSRVVCFGEEGSSMVCLQ 150
GNK+DV +V + EE + CL+
Sbjct: 1359 GNKVDVPESERQV--YTEEAQAW-CLE 1382
>gi|242020304|ref|XP_002430595.1| rab9 and, putative [Pediculus humanus corporis]
gi|212515767|gb|EEB17857.1| rab9 and, putative [Pediculus humanus corporis]
Length = 210
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 90/127 (70%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LKV+ILGD VGK+ LM +YVN +F TIG +FL KE+ +D+ F LQIW
Sbjct: 2 SGKNAILKVVILGDGAVGKSCLMQRYVNNRFDENSFHTIGVEFLNKEIDLDDKTFILQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL FYRG+D C+LV+ + +SF+N+ W+ EF+ A DP NFPFV+
Sbjct: 62 DTAGQERFKSLRTPFYRGSDLCLLVFSFDDRESFENIEKWKNEFVHYADIKDPANFPFVI 121
Query: 123 LGNKIDV 129
+GNK+D+
Sbjct: 122 IGNKVDL 128
>gi|330798347|ref|XP_003287215.1| hypothetical protein DICPUDRAFT_78083 [Dictyostelium purpureum]
gi|325082798|gb|EGC36269.1| hypothetical protein DICPUDRAFT_78083 [Dictyostelium purpureum]
Length = 199
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R ++K++I+G+ VGKTS++ +YV+++F K TIG DF+ K+V D++ TLQ+WDT+
Sbjct: 4 RRVIKIVIIGEKSVGKTSILKRYVDQRFIT-LKPTIGIDFVNKDVMVNDQMVTLQLWDTS 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERF+SL V++YRGADCC+LV+DV S KS +L WR++F+ + D DNFPFVVLGN
Sbjct: 63 GQERFRSLEVSYYRGADCCILVFDVTSEKSLHDLKLWRDDFIEKTGVQDADNFPFVVLGN 122
Query: 126 KID 128
K+D
Sbjct: 123 KVD 125
>gi|281207490|gb|EFA81673.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 184
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
R ++K++I+G+ VGKTS++ +YV+++F K TIG DF+ K+V D++ TLQ+WDT+
Sbjct: 4 RKVVKIVIIGEKSVGKTSILKRYVDQRFV-PLKPTIGVDFVNKDVMVNDKMVTLQLWDTS 62
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERF+SL +++YRGADCC+LV+DV + K+ L WRE+F+ + +PD FPFVVLGN
Sbjct: 63 GQERFRSLEISYYRGADCCILVFDVTNEKTLHELKMWREDFIDKTGVQNPDQFPFVVLGN 122
Query: 126 KID 128
K+D
Sbjct: 123 KVD 125
>gi|307208064|gb|EFN85595.1| Ras-related protein Rab-9A [Harpegnathos saltator]
Length = 223
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 95/148 (64%), Gaps = 3/148 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+R TLLKV+ILGD GVGK+ LMN++V+ F TIG +FL K+++ +TLQIW
Sbjct: 14 SQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQIW 73
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF++L FYRG+D C+L Y V+ SF NL WR EFL A + FPF+V
Sbjct: 74 DTAGQERFKTLRTPFYRGSDICLLTYAVDDWTSFKNLTLWRSEFLKYADVREASTFPFIV 133
Query: 123 LGNKIDVDGGNSRVVCFGEEGSSMVCLQ 150
+GNK+DV +V E + CL+
Sbjct: 134 IGNKVDVSESEKQV---STEDAQAWCLE 158
>gi|197308606|gb|ACH60654.1| rab GTPase [Pseudotsuga macrocarpa]
Length = 84
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/78 (85%), Positives = 74/78 (94%)
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQERFQSLGVAFYRGADCC LVYDVN +KSFDNL+NWR+EFLIQA+P+DP+NFP
Sbjct: 1 QIWDTAGQERFQSLGVAFYRGADCCGLVYDVNVLKSFDNLDNWRQEFLIQANPTDPENFP 60
Query: 120 FVVLGNKIDVDGGNSRVV 137
FVVLGNK DVD G+SRVV
Sbjct: 61 FVVLGNKTDVDDGHSRVV 78
>gi|345480117|ref|XP_001606884.2| PREDICTED: ras-related protein Rab-9A-like [Nasonia vitripennis]
Length = 221
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 98/148 (66%), Gaps = 3/148 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+R TLLKV+ILGD GVGK+ LMN++V+ F Q TIG +FL K+++ +TLQIW
Sbjct: 13 SQRSTLLKVVILGDGGVGKSCLMNRFVSNNFDEQSFHTIGVEFLNKDIEINGESYTLQIW 72
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF++L FYRG+D C+L Y V+ SF NL W+ EFL A + +FPF++
Sbjct: 73 DTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFRNLTLWKSEFLYYADVQEESSFPFII 132
Query: 123 LGNKIDVDGGNSRVVCFGEEGSSMVCLQ 150
+GNK+DV + +V E + CL+
Sbjct: 133 VGNKVDVPESDKQV---STEEAKAWCLE 157
>gi|328777207|ref|XP_394445.4| PREDICTED: ras-related protein Rab-9A-like [Apis mellifera]
gi|380030090|ref|XP_003698691.1| PREDICTED: ras-related protein Rab-9A-like [Apis florea]
Length = 236
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 90/134 (67%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+R TLLKV+ILGD GVGK+ LMN++V+ F TIG +FL K+++ +TLQIW
Sbjct: 22 SQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQIW 81
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF++L FYRG+D C+L Y V+ SF NL WR EFL A + FPF+V
Sbjct: 82 DTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFKNLALWRSEFLYYADVQEGSTFPFIV 141
Query: 123 LGNKIDVDGGNSRV 136
+GNK+DV +V
Sbjct: 142 VGNKVDVPDSEKQV 155
>gi|383848562|ref|XP_003699918.1| PREDICTED: ras-related protein Rab-9A-like [Megachile rotundata]
Length = 236
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 90/134 (67%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+R TLLKV+ILGD GVGK+ LMN++V+ F TIG +FL K+++ +TLQIW
Sbjct: 22 SQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQIW 81
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF++L FYRG+D C+L Y V+ SF NL WR EFL A + FPF+V
Sbjct: 82 DTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFKNLALWRSEFLYYADVQEGSTFPFIV 141
Query: 123 LGNKIDVDGGNSRV 136
+GNK+DV +V
Sbjct: 142 VGNKVDVPESEKQV 155
>gi|403352763|gb|EJY75899.1| Ras-related protein Rab-7a [Oxytricha trifallax]
Length = 320
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 94/136 (69%), Gaps = 16/136 (11%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRL------------- 56
K+++LGDSGVGKT+L+ ++VN+KF++Q+K+TIG DF K V E +L
Sbjct: 23 KILVLGDSGVGKTALIQRFVNEKFNSQFKSTIGVDFHHKPVLLEGKLAQAGQLAGLKTGV 82
Query: 57 ---FTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS 113
+QIWDTAGQERFQSLG +YRGADCC LV+D+N SF+ + +WR+ FL + P
Sbjct: 83 GNEVVMQIWDTAGQERFQSLGYGYYRGADCCALVFDLNDPDSFERVAHWRDIFLNYSDPV 142
Query: 114 DPDNFPFVVLGNKIDV 129
DP FPF+++GNK D+
Sbjct: 143 DPYTFPFILIGNKSDL 158
>gi|167535786|ref|XP_001749566.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771958|gb|EDQ85617.1| predicted protein [Monosiga brevicollis MX1]
Length = 199
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 90/124 (72%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLKV+ILGD GVGK+SLM ++VN F TIG +FL K++ +++ LQIWDTAGQ
Sbjct: 7 LLKVVILGDGGVGKSSLMARFVNNTFDEHNYHTIGVEFLNKDIIVDNKTCHLQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER+++L FYRG+DCC+ V+D+ +FD+L+ W EF A DPDNFPF+++GNK+
Sbjct: 67 ERYKALRRPFYRGSDCCMFVFDLTDRHTFDHLDAWISEFKEFAEVEDPDNFPFLLVGNKV 126
Query: 128 DVDG 131
DV+G
Sbjct: 127 DVEG 130
>gi|327278641|ref|XP_003224069.1| PREDICTED: ras-related protein Rab-7b-like [Anolis carolinensis]
Length = 200
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 102/151 (67%), Gaps = 6/151 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S +R LK+II+G GVGKTSL++QYV+KKF Y+ T+GA LTK V + LQ
Sbjct: 1 MSSSKRVDLKIIIIGALGVGKTSLLHQYVHKKFYEDYRTTLGASILTKMVAVDRTPLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV M SF+ L +WRE+FL + P++ FP
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCMLAFDVTDMDSFECLEDWREDFLQKVIPTE-QGFPM 119
Query: 121 VVLGNKIDVDGGNSRVVCFGEEGSSMVCLQR 151
VVLGNKID+ N R V +E +S+ C ++
Sbjct: 120 VVLGNKIDL---NDRQV--SKETASLWCKEK 145
>gi|340711429|ref|XP_003394278.1| PREDICTED: ras-related protein Rab-9A-like [Bombus terrestris]
gi|350416155|ref|XP_003490860.1| PREDICTED: ras-related protein Rab-9A-like [Bombus impatiens]
Length = 236
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 89/134 (66%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+R TLLKV+ILGD GVGK+ LMN++V+ F TIG +FL K++ +TLQIW
Sbjct: 22 SQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIDINGEAYTLQIW 81
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF++L FYRG+D C+L Y V+ SF NL WR EFL A + FPF+V
Sbjct: 82 DTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFKNLALWRSEFLYYADVQEGSTFPFIV 141
Query: 123 LGNKIDVDGGNSRV 136
+GNK+DV +V
Sbjct: 142 VGNKVDVPDSEKQV 155
>gi|321478913|gb|EFX89869.1| hypothetical protein DAPPUDRAFT_299986 [Daphnia pulex]
Length = 216
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 98/143 (68%), Gaps = 7/143 (4%)
Query: 1 MPSRR------RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED 54
MP+ R R++LKV+ILGD GVGKT +M +++N +F + TIG +FL K+
Sbjct: 1 MPNPRKPQVETRSVLKVLILGDGGVGKTCIMGRFINDQFEDNSFHTIGVEFLNKDFALTG 60
Query: 55 RLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSD 114
+ +TLQIWDTAGQERF+SL FYRG D C+LV+ ++ SF NL+ WR+EFL A D
Sbjct: 61 KNYTLQIWDTAGQERFKSLRTPFYRGTDICLLVFSLDDKSSFSNLSLWRQEFLHYADIQD 120
Query: 115 PDNFPFVVLGNKIDVDGGNSRVV 137
P ++PF+++GNK+D+ G SR V
Sbjct: 121 PQDYPFIIVGNKVDL-GAASRTV 142
>gi|440299290|gb|ELP91858.1| GTP-binding protein yptV5, putative [Entamoeba invadens IP1]
Length = 206
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 92/123 (74%), Gaps = 2/123 (1%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLK I++G SGVGKT+L+ + +KF+N YKATIGADF+TK + ++ ++QIWDTAG
Sbjct: 6 LLKTILIGTSGVGKTALITTFCCEKFTNNYKATIGADFVTKSMIVGNKEVSMQIWDTAGN 65
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS--DPDNFPFVVLGN 125
ERF SL VAFYRGADCC LV+DV++ KSF+ L W++EFL A S D +PFV++GN
Sbjct: 66 ERFVSLSVAFYRGADCCGLVFDVSNEKSFERLLFWKDEFLRNACTSLGDDRKYPFVIIGN 125
Query: 126 KID 128
K D
Sbjct: 126 KTD 128
>gi|226495637|ref|NP_001152475.1| ras-related protein Rab7 [Zea mays]
gi|195656657|gb|ACG47796.1| ras-related protein Rab7 [Zea mays]
Length = 194
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/74 (90%), Positives = 70/74 (94%)
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERFQSLGVAFY+GADCCVLVYDVN KSF+ LNNWREEFLIQASPSDP+NFPFVVL
Sbjct: 51 TAGQERFQSLGVAFYKGADCCVLVYDVNVSKSFEKLNNWREEFLIQASPSDPENFPFVVL 110
Query: 124 GNKIDVDGGNSRVV 137
GNKIDVDGGNSR V
Sbjct: 111 GNKIDVDGGNSRTV 124
>gi|91085159|ref|XP_970524.1| PREDICTED: similar to ras-related protein Rab-9 [Tribolium
castaneum]
gi|270009063|gb|EFA05511.1| hypothetical protein TcasGA2_TC015698 [Tribolium castaneum]
Length = 214
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 91/135 (67%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P+ + TLLKV+ILGD GVGK+ LMN++V+ +F TIG +FL K+++ + +TLQI
Sbjct: 3 PTNKNTLLKVVILGDGGVGKSCLMNRFVSNQFDEHSFHTIGVEFLNKDIEIDGETYTLQI 62
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y V+ SF NL W+ EFL A + FPF+
Sbjct: 63 WDTAGQERFKTLRTPFYRGSDICMLTYAVDDKHSFRNLQMWKNEFLYYADVKENVQFPFI 122
Query: 122 VLGNKIDVDGGNSRV 136
V+GNK DV+ V
Sbjct: 123 VVGNKSDVEQNEREV 137
>gi|307169889|gb|EFN62398.1| Ras-related protein Rab-9A [Camponotus floridanus]
Length = 231
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S+R TLLKV+ILGD GVGK+ LMN++V+ F TIG +FL K+++ +TLQIW
Sbjct: 22 SQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEGYTLQIW 81
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF++L FYRG+D C+L Y V+ SF NL WR EFL A + +FPF+V
Sbjct: 82 DTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFRNLALWRSEFLKYADVQEDSSFPFIV 141
Query: 123 LGNKIDVDGGNSRVVCFGEEGSSMVCLQ 150
+GNK+DV +V E + CL+
Sbjct: 142 VGNKVDVAESEKQV---STEEAQAWCLE 166
>gi|363743053|ref|XP_001235016.2| PREDICTED: ras-related protein Rab-7b-like [Gallus gallus]
Length = 207
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 92/129 (71%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S ++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA LTK V + LQ
Sbjct: 8 MDSSKKVDLKIIIIGALGVGKTSLLHQYVHKTFYEDYRTTLGASILTKVVAVDKTPLKLQ 67
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV M+SF+ L+NWR++FL + P D D FP
Sbjct: 68 IWDTGGQERFRSMVSTFYKGSDGCMLAFDVTDMESFEALDNWRDDFLEKVIPRDHD-FPM 126
Query: 121 VVLGNKIDV 129
VVLGNKID+
Sbjct: 127 VVLGNKIDL 135
>gi|68066072|ref|XP_675019.1| ras family GTP-ase [Plasmodium berghei strain ANKA]
gi|56493957|emb|CAI02563.1| ras family GTP-ase, putative [Plasmodium berghei]
Length = 170
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 79/89 (88%)
Query: 40 TIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNL 99
++GADFLTKE ++ T+QIWDTAGQERFQSLGVAFYRGADCCVLV+D+ + K++++L
Sbjct: 4 SVGADFLTKETVVDNEQLTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESL 63
Query: 100 NNWREEFLIQASPSDPDNFPFVVLGNKID 128
+W++EFLIQASP DP+NFPFV++GNK+D
Sbjct: 64 ESWKDEFLIQASPKDPENFPFVIIGNKVD 92
>gi|70946255|ref|XP_742861.1| ras family GTP-ase [Plasmodium chabaudi chabaudi]
gi|56522073|emb|CAH74595.1| ras family GTP-ase, putative [Plasmodium chabaudi chabaudi]
Length = 184
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/97 (65%), Positives = 81/97 (83%), Gaps = 2/97 (2%)
Query: 41 IGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLN 100
+GADFLTKE ++ T+QIWDTAGQERFQSLGVAFYRGADCCVLV+D+ + K++++L
Sbjct: 19 VGADFLTKETVVDNEQLTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLE 78
Query: 101 NWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVV 137
+W++EFLIQASP DP+NFPFV++GNK VD N R V
Sbjct: 79 SWKDEFLIQASPKDPENFPFVIIGNK--VDETNKRKV 113
>gi|443718218|gb|ELU08963.1| hypothetical protein CAPTEDRAFT_127231 [Capitella teleta]
Length = 202
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 87/121 (71%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLKV++LGD GVGK+SLM+++V+ KF TIG +F K++ FTLQIWDTAGQ
Sbjct: 14 LLKVVLLGDGGVGKSSLMHRFVSNKFETLSFYTIGVEFRNKDIIVNGETFTLQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+SL FYRGADCC+L + V+ M S NL+ W++EFL A + D FPFVVLGNK+
Sbjct: 74 ERFKSLRTPFYRGADCCLLTFGVDDMVSLKNLSFWKKEFLYNADVQEADLFPFVVLGNKV 133
Query: 128 D 128
D
Sbjct: 134 D 134
>gi|326437216|gb|EGD82786.1| small GTP binding protein Rab9 [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S R ++KVI+LGD VGK+SLM Q+V +F+++ TIG + L K+V+ T+Q
Sbjct: 1 MASSTR-MVKVILLGDGSVGKSSLMQQFVRNEFNSESFHTIGVEVLNKDVRVGSEAITMQ 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+SL FYRGADCC+L +D+ SF+N+N WR+EFL AS D FPF
Sbjct: 60 IWDTAGQERFRSLRTPFYRGADCCMLTFDLTDPNSFNNINMWRDEFLKHASVDDVAAFPF 119
Query: 121 VVLGNKIDV 129
++LGNK D+
Sbjct: 120 LLLGNKADL 128
>gi|403346646|gb|EJY72726.1| Small GTPase Rab7, putative [Oxytricha trifallax]
Length = 201
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 86/116 (74%), Gaps = 6/116 (5%)
Query: 26 NQYVNKKFSNQYKATIGADFLTKEVQF----EDRLFTLQIWDTAGQERFQSLGVAFYRGA 81
+ Y+ K S YK TIGADF +K+++ E + TLQIWDTAGQER+QSLGVAFYRGA
Sbjct: 7 SHYIRKSISQVYKPTIGADFHSKKLEIMEGDELKSVTLQIWDTAGQERYQSLGVAFYRGA 66
Query: 82 DCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVV 137
+ CVLVYD+ + +SF+NL W+++FL++A+P DPDNFPF V GNK VD N R V
Sbjct: 67 EACVLVYDITNQRSFENLTIWKQDFLVKANPKDPDNFPFFVFGNK--VDKPNERKV 120
>gi|332113279|gb|AEE02039.1| Rab7-like GTPase [Beauveria bassiana]
Length = 137
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/78 (80%), Positives = 72/78 (92%)
Query: 53 EDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASP 112
+DR T+Q+WDTAGQERFQSLGVAFYRGADCCVLVYDVN+ KSF+ L++WR+EFLIQASP
Sbjct: 2 DDRQVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASP 61
Query: 113 SDPDNFPFVVLGNKIDVD 130
DP NFPFVV+GNKIDVD
Sbjct: 62 RDPPNFPFVVIGNKIDVD 79
>gi|440295670|gb|ELP88577.1| hypothetical protein EIN_335590 [Entamoeba invadens IP1]
Length = 206
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
+L KV++LG++ VGKTSL+ QY+ KKF + K+T+GADF+T EV+ + + LQIWDTAG
Sbjct: 5 SLFKVVVLGEANVGKTSLLTQYITKKFYEKTKSTVGADFITHEVEVDGQTVVLQIWDTAG 64
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP-DNFPFVVLGN 125
ERF SLG F+RGA+CCVLV D+ + KSF+ +++W++ L S D ++FPFV++GN
Sbjct: 65 SERFCSLGPVFFRGAECCVLVCDMTNAKSFEKIDSWKKVLLSSLSQQDDIESFPFVIVGN 124
Query: 126 KID 128
K D
Sbjct: 125 KSD 127
>gi|313235522|emb|CBY10977.1| unnamed protein product [Oikopleura dioica]
Length = 198
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 87/130 (66%), Gaps = 5/130 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R +LKVI+LGDSGVGK+SL+N+YVN+KFS TIG D TK E TLQ
Sbjct: 1 MSNRPNPILKVILLGDSGVGKSSLINRYVNEKFSENNMQTIGVDLFTKIADVEGAKVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF++L FYRGADC VLVY +S++S DNLN+WR EF A N P
Sbjct: 61 IWDTGGQERFRALRTPFYRGADCAVLVYSKDSLQSVDNLNHWRSEFEKHAG-----NAPI 115
Query: 121 VVLGNKIDVD 130
+V NK +++
Sbjct: 116 LVAMNKSEIE 125
>gi|355714974|gb|AES05182.1| Ras-related protein Rab-7b [Mustela putorius furo]
Length = 173
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P +P ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPMEP-SYPM 119
Query: 121 VVLGNKIDV 129
VVLGNKID+
Sbjct: 120 VVLGNKIDL 128
>gi|326933759|ref|XP_003212967.1| PREDICTED: ras-related protein Rab-7b-like [Meleagris gallopavo]
Length = 207
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + ++ LK+II+G GVGKTSL++QYV+ F Y+ T+GA LTK V + LQ
Sbjct: 8 MDASKKVDLKIIIIGALGVGKTSLLHQYVHNTFYEDYRTTLGASILTKVVAVDKTPLKLQ 67
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF++L+NWR++FL + P D D FP
Sbjct: 68 IWDTGGQERFRSMVSTFYKGSDGCMLAFDVTDRESFESLDNWRDDFLEKVIPRDYD-FPM 126
Query: 121 VVLGNKIDV 129
VVLGNKID+
Sbjct: 127 VVLGNKIDL 135
>gi|74005898|ref|XP_848668.1| PREDICTED: ras-related protein Rab-7b-like isoform 2 [Canis lupus
familiaris]
Length = 200
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P +P ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPMEP-SYPM 119
Query: 121 VVLGNKIDV 129
VVLGNKID+
Sbjct: 120 VVLGNKIDL 128
>gi|410986345|ref|XP_003999471.1| PREDICTED: ras-related protein Rab-7b-like isoform 1 [Felis catus]
gi|410986347|ref|XP_003999472.1| PREDICTED: ras-related protein Rab-7b-like isoform 2 [Felis catus]
Length = 200
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P +P ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPMEP-SYPM 119
Query: 121 VVLGNKIDV 129
VVLGNKID+
Sbjct: 120 VVLGNKIDL 128
>gi|299473639|emb|CBN78033.1| Rab7L, RAB family GTPase [Ectocarpus siliculosus]
Length = 365
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 90/131 (68%), Gaps = 3/131 (2%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+ R LLK+++LG S VGKTSLM +Y F++ + TIGADF+TKEV D+ LQIWD
Sbjct: 149 KPRVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWD 208
Query: 64 TAGQERFQ--SLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
TAGQERF SLG F+RGA+ +LVYDV SF+ + WREE L++ DP +FP V
Sbjct: 209 TAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLD-VDPHDFPIV 267
Query: 122 VLGNKIDVDGG 132
V+GNK+D+ G
Sbjct: 268 VIGNKVDLATG 278
>gi|301786120|ref|XP_002928475.1| PREDICTED: ras-related protein Rab-7b-like [Ailuropoda melanoleuca]
gi|281339452|gb|EFB15036.1| hypothetical protein PANDA_018434 [Ailuropoda melanoleuca]
Length = 200
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P +P ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPMEP-SYPM 119
Query: 121 VVLGNKIDV 129
VVLGNKID+
Sbjct: 120 VVLGNKIDL 128
>gi|384486148|gb|EIE78328.1| hypothetical protein RO3G_03032 [Rhizopus delemar RA 99-880]
Length = 704
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 61/95 (64%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 37 YKATIGADFLTKEV-QFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKS 95
Y+ IG K+ ++ + T+QIWDTAGQERFQSLGVAFYRGADCCVLVYDVN+ S
Sbjct: 533 YEMGIGVPRNYKQAYRYYSKAITMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNTAS 592
Query: 96 FDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVD 130
+ +L W +EFL+QASP DPD FPFV+LGNK+DVD
Sbjct: 593 YQSLEGWHDEFLLQASPRDPDRFPFVILGNKVDVD 627
>gi|345307118|ref|XP_003428537.1| PREDICTED: ras-related protein Rab-7b-like isoform 2
[Ornithorhynchus anatinus]
Length = 158
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 91/135 (67%), Gaps = 1/135 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LK+II G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNSRKKVDLKLIITGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIVVDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D CVL YDV ++SF +++WR + L + +D FP
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAYDVTDLESFHAMDDWRGDILEKIVSTDQ-AFPM 119
Query: 121 VVLGNKIDVDGGNSR 135
VVLGNKID+ SR
Sbjct: 120 VVLGNKIDLGDRQSR 134
>gi|440802513|gb|ELR23442.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 211
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 81/104 (77%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P+++ T+LKV+++G+SGVGKTSLM QYVNK FS YK TIGADFL K++ EDR LQI
Sbjct: 5 PTQKATVLKVVLIGNSGVGKTSLMQQYVNKSFSLHYKTTIGADFLMKDLFVEDRAVLLQI 64
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 105
WDTAGQE F+SLG AFYRGAD C+LV+DV + SFD L ++
Sbjct: 65 WDTAGQETFRSLGSAFYRGADACMLVFDVTNKYSFDCLGGTKQH 108
>gi|194762186|ref|XP_001963237.1| GF14043 [Drosophila ananassae]
gi|190616934|gb|EDV32458.1| GF14043 [Drosophila ananassae]
Length = 253
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P +R LLKV+ILGD GVGK++L+N++V+ ++ TIG +F+ K+++ + +TLQI
Sbjct: 6 PPQRSKLLKVVILGDGGVGKSALLNRFVSNRYEENNFHTIGVEFMNKDIEVDGERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S LN WR EFL+ A D D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLRGLNLWRNEFLMYAD-VDADKFPFI 124
Query: 122 VLGNKIDV 129
V+GNK D+
Sbjct: 125 VVGNKNDL 132
>gi|431892879|gb|ELK03307.1| Ras-related protein Rab-7b [Pteropus alecto]
Length = 236
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 95/141 (67%), Gaps = 2/141 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ LN WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALNTWRGDVLAKIIPVE-QSYPM 119
Query: 121 VVLGNKIDV-DGGNSRVVCFG 140
VVLGNKID+ D SR V G
Sbjct: 120 VVLGNKIDLADRQVSREVAQG 140
>gi|157119506|ref|XP_001659411.1| ras-related protein Rab-9, putative [Aedes aegypti]
gi|108875316|gb|EAT39541.1| AAEL008673-PA [Aedes aegypti]
Length = 232
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P + LLKV+ILGD GVGK+ LMN++V+ F TIG +FL K++Q E+ +TLQI
Sbjct: 6 PPSKNVLLKVVILGDGGVGKSCLMNRFVSNFFDANSFHTIGVEFLNKDIQVENERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y V+ SF L WREEFL + D FPF+
Sbjct: 66 WDTAGQERFKALRTPFYRGSDICLLAYAVDDKASFRALIQWREEFL-KYYDVKADRFPFI 124
Query: 122 VLGNKIDVDGGNSRVVC 138
V+G K D+ +V+
Sbjct: 125 VVGTKNDIPAAQRQVMA 141
>gi|123398520|ref|XP_001301291.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121882455|gb|EAX88361.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 86/124 (69%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ K+++LGDS VGKTS+++ ++NK+F +K+TIGADF + E+ + LQIWDTAGQ
Sbjct: 5 VCKLVVLGDSSVGKTSIIHNFINKEFVANFKSTIGADFSSTEIDVDQNKIELQIWDTAGQ 64
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF S+ FYRG+D C+LV+D+ + SF NL WR+ L + D +FPF+++ NK
Sbjct: 65 ERFHSVSSTFYRGSDACILVFDITNHDSFKNLCKWRQSMLEKGGMDDTRSFPFIIMANKS 124
Query: 128 DVDG 131
D++
Sbjct: 125 DLES 128
>gi|149411574|ref|XP_001509956.1| PREDICTED: ras-related protein Rab-7b-like isoform 1
[Ornithorhynchus anatinus]
Length = 200
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 94/141 (66%), Gaps = 2/141 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR++ LK+II G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNSRKKVDLKLIITGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIVVDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D CVL YDV ++SF +++WR + L + +D FP
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAYDVTDLESFHAMDDWRGDILEKIVSTDQ-AFPM 119
Query: 121 VVLGNKIDV-DGGNSRVVCFG 140
VVLGNKID+ D S+ V G
Sbjct: 120 VVLGNKIDLGDRQVSQEVALG 140
>gi|158298801|ref|XP_318959.3| AGAP009846-PA [Anopheles gambiae str. PEST]
gi|157014060|gb|EAA14215.3| AGAP009846-PA [Anopheles gambiae str. PEST]
Length = 233
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 88/137 (64%), Gaps = 1/137 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P + LLKV+ILGD VGK+ LMN++V+ F TIG +FL K++Q + FTLQI
Sbjct: 6 PPSKNILLKVVILGDGNVGKSCLMNRFVSNYFDANSFHTIGVEFLNKDIQVDQERFTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG D C+L Y +N SF L +WR+EFL + +PD+FPFV
Sbjct: 66 WDTAGQERFRALRTPFYRGTDICLLTYAINDRLSFRALVSWRDEFL-RYYDVNPDHFPFV 124
Query: 122 VLGNKIDVDGGNSRVVC 138
V+G K D+ V
Sbjct: 125 VVGTKNDLPPAQREVTA 141
>gi|413946252|gb|AFW78901.1| hypothetical protein ZEAMMB73_911919 [Zea mays]
Length = 154
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 70/82 (85%)
Query: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
L +QIWDTAGQERFQSLGVAFYRGADCCVLVYDVN +SF+ L+ W +EFL QA PSDP
Sbjct: 5 LLCMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVKRSFNTLDTWHDEFLNQAGPSDP 64
Query: 116 DNFPFVVLGNKIDVDGGNSRVV 137
FPF+++GNKID+DGG+ R+V
Sbjct: 65 QRFPFILVGNKIDLDGGSKRMV 86
>gi|123475443|ref|XP_001320899.1| Ras family protein [Trichomonas vaginalis G3]
gi|121903714|gb|EAY08676.1| Ras family protein [Trichomonas vaginalis G3]
Length = 1044
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 65/129 (50%), Positives = 93/129 (72%), Gaps = 2/129 (1%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR + ++KV+ LGD GKTSL+NQYVN+++ YKATIG+DF +K+V + + TLQ
Sbjct: 1 MQSRSQPIIKVLFLGDPS-GKTSLINQYVNQEYPINYKATIGSDFFSKDVDIDGKYVTLQ 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWD+AGQE +QS+ FYR +C +LVYDV + +SF+N+N W+ +F +Q S NFP
Sbjct: 60 IWDSAGQENYQSIP-TFYRWTNCLILVYDVTNAESFENINKWKSQFELQLGLSSNSNFPI 118
Query: 121 VVLGNKIDV 129
++LGNK D+
Sbjct: 119 LLLGNKCDL 127
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 30/161 (18%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ------------- 51
+R L+V + G+S VGKT+++ ++ F + + I + ++ +
Sbjct: 200 KRQKLQVCLAGESTVGKTAILERFTLDLFMDGCQGVIHGNIWSQALTINSENVDYGYQGT 259
Query: 52 FEDRLFT-----------LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLN 100
F D++++ L I D G E++ SL +++GA +LV+D+ K+F++L
Sbjct: 260 FADKIWSKTLTINSEKVDLDILDMDGNEKYSSLTKIYFKGAFIVILVFDLTQRKTFEDLT 319
Query: 101 NWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVCFGE 141
+W ++ P N ++GNK D++ + RV+ F E
Sbjct: 320 SWLDDIRTFCDP----NCIVQLIGNKSDLN--HKRVISFEE 354
>gi|170046060|ref|XP_001850603.1| ras-related protein Rab-9 [Culex quinquefasciatus]
gi|167868965|gb|EDS32348.1| ras-related protein Rab-9 [Culex quinquefasciatus]
Length = 233
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 88/136 (64%), Gaps = 1/136 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P + LLKV+ILGD GVGK+ LMN++V+ F TIG +FL K++Q ++ FTLQI
Sbjct: 6 PPSKNVLLKVVILGDGGVGKSCLMNRFVSNFFDANSFHTIGVEFLNKDIQVDNERFTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y V+ SF L WREEFL + D FPF+
Sbjct: 66 WDTAGQERFKALRTPFYRGSDICLLAYAVDDKSSFRALIQWREEFL-KYYDVKADRFPFI 124
Query: 122 VLGNKIDVDGGNSRVV 137
V+G K D+ +V
Sbjct: 125 VVGTKSDIPVAQRQVT 140
>gi|444706400|gb|ELW47742.1| Solute carrier family 26 member 9 [Tupaia chinensis]
Length = 1191
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIMLDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSVVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPVE-QSYPM 119
Query: 121 VVLGNKIDV 129
VVLGNKID+
Sbjct: 120 VVLGNKIDL 128
>gi|403334463|gb|EJY66390.1| Ras-related protein RABG3f [Oxytricha trifallax]
Length = 232
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 89/127 (70%), Gaps = 5/127 (3%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQIWD 63
++ LKVII+GDSGVGKTSL+ + KK S K TIGA+F ++V+ + + LQIWD
Sbjct: 2 QKGFLKVIIIGDSGVGKTSLLEAFNYKKISKSAKPTIGAEFTKRKVKLQSGKEVNLQIWD 61
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN--FPFV 121
TAGQERFQSL +FYRG DCC+LV+D+ S +S++NLNNWR L Q + D N P +
Sbjct: 62 TAGQERFQSLCTSFYRGTDCCILVFDLTSSESYENLNNWRS--LFQQTTGDDQNQEIPII 119
Query: 122 VLGNKID 128
++GNK D
Sbjct: 120 LVGNKCD 126
>gi|351710944|gb|EHB13863.1| Ras-related protein Rab-7b, partial [Heterocephalus glaber]
Length = 174
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKMDLKLIIVGALGVGKTSLLHQYVHKTFYEEYQTTLGASILSKVIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF L+ WR++ L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFKALDVWRDDVLAKIIPVE-QSYPM 119
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 120 VVLGNKIDLE 129
>gi|149707819|ref|XP_001490928.1| PREDICTED: ras-related protein Rab-7b-like [Equus caballus]
Length = 200
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIVLDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPME-QSYPM 119
Query: 121 VVLGNKIDV 129
VVLGNKID+
Sbjct: 120 VVLGNKIDL 128
>gi|426239405|ref|XP_004013612.1| PREDICTED: ras-related protein Rab-7b-like [Ovis aries]
Length = 200
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D CVL +DV ++SF+ L WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPME-QSYPM 119
Query: 121 VVLGNKIDV 129
VVLGNKID+
Sbjct: 120 VVLGNKIDL 128
>gi|213406938|ref|XP_002174240.1| GTP-binding protein ypt71 [Schizosaccharomyces japonicus yFS275]
gi|212002287|gb|EEB07947.1| GTP-binding protein ypt71 [Schizosaccharomyces japonicus yFS275]
Length = 176
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 82/130 (63%), Gaps = 31/130 (23%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S RRTLLKV+ILGDSGV + + TLQ
Sbjct: 1 MTSPRRTLLKVVILGDSGV-------------------------------EVDGEAITLQ 29
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERFQSLGVAFYRGADCC++VYDVN+ KSF+++ NWR EFL Q S + + FPF
Sbjct: 30 LWDTAGQERFQSLGVAFYRGADCCIVVYDVNNAKSFESVENWRSEFLEQTSSLNNNAFPF 89
Query: 121 VVLGNKIDVD 130
V+LGN+ID D
Sbjct: 90 VILGNQIDKD 99
>gi|148707755|gb|EDL39702.1| RIKEN cDNA 5430435G22, isoform CRA_a [Mus musculus]
Length = 220
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 22 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 81
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P
Sbjct: 82 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPM 140
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 141 VVLGNKIDLE 150
>gi|118151120|ref|NP_001071481.1| ras-related protein Rab-7b [Bos taurus]
gi|122132235|sp|Q08DE8.1|RAB7B_BOVIN RecName: Full=Ras-related protein Rab-7b
gi|115305016|gb|AAI23790.1| RAB7B, member RAS oncogene family [Bos taurus]
gi|296479391|tpg|DAA21506.1| TPA: ras-related protein Rab-7b [Bos taurus]
Length = 200
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL+++YV+K F Y+ T+GA L+K + ED LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D CVL +DV ++SF+ L WR + L + P + +P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPME-QPYPM 119
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 120 VVLGNKIDLE 129
>gi|148230058|ref|NP_001091168.1| RAB7B, member RAS oncogene family [Xenopus laevis]
gi|120538730|gb|AAI29678.1| LOC100036928 protein [Xenopus laevis]
Length = 201
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 99/156 (63%), Gaps = 6/156 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S + LK+ I+G G GKTSL+NQYV+K F N Y+ T+GA L+K +Q ++ LQ
Sbjct: 1 MNSGNKVDLKINIIGPMGTGKTSLLNQYVHKWFLNDYQNTLGAHLLSKTIQLDNTNLNLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF++L FY+G+D C+LV+DV +SF L WR++FL + P D FP
Sbjct: 61 IWDTGGQERFRTLVSTFYKGSDGCLLVFDVTDEESFACLEFWRKDFLDKIPPPAAD-FPL 119
Query: 121 VVLGNKIDVDGGNSRVVCFGEEGSSMVCLQRKYSLL 156
+VLGNKID+ N R V +E + C +K S L
Sbjct: 120 IVLGNKIDL---NDRQV--SKESAMTWCKGKKVSYL 150
>gi|149058661|gb|EDM09818.1| similar to RAB7-like protein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 208
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 10 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 69
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P
Sbjct: 70 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIVPME-QSYPM 128
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 129 VVLGNKIDLE 138
>gi|154422751|ref|XP_001584387.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121918634|gb|EAY23401.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 190
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 83/116 (71%)
Query: 14 LGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSL 73
+GDS VGKT+L++ +VN +F +KATIGADF +K V + LQIWDTAG+ERF S+
Sbjct: 1 MGDSSVGKTTLIHSFVNNEFCEDFKATIGADFFSKTVTVDGTTIDLQIWDTAGEERFHSV 60
Query: 74 GVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
GVAFYRG D C+LVYD+ + +F + W ++ L +A ++PD FP ++ GNKID+
Sbjct: 61 GVAFYRGTDACLLVYDITQIDTFKRVGVWLDDLLNKAGITNPDAFPIMLFGNKIDL 116
>gi|335295290|ref|XP_003357460.1| PREDICTED: ras-related protein Rab-7b-like [Sus scrofa]
Length = 200
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALETWRGDVLAKTIPME-QSYPM 119
Query: 121 VVLGNKIDV 129
VVLGNKID+
Sbjct: 120 VVLGNKIDL 128
>gi|432116086|gb|ELK37213.1| Ras-related protein Rab-7b [Myotis davidii]
Length = 199
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEDYQTTLGASILSKIIILNDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ LN WR + L + P++ ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALNTWRGDVLAKIIPTE-QSYPM 119
Query: 121 VVLGNKIDVD 130
V LGNKID++
Sbjct: 120 VALGNKIDLE 129
>gi|157818725|ref|NP_001102798.1| ras-related protein Rab-7b [Rattus norvegicus]
gi|149058662|gb|EDM09819.1| similar to RAB7-like protein (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 199
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 120 VVLGNKIDLE 129
>gi|26331122|dbj|BAC29291.1| unnamed protein product [Mus musculus]
Length = 157
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPM 119
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 120 VVLGNKIDLE 129
>gi|26348325|dbj|BAC37802.1| unnamed protein product [Mus musculus]
gi|404516955|gb|AFR77764.1| Rab7b [Mus musculus]
Length = 157
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPM 119
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 120 VVLGNKIDLE 129
>gi|21704002|ref|NP_663484.1| ras-related protein Rab-7b [Mus musculus]
gi|50401091|sp|Q8VEA8.1|RAB7B_MOUSE RecName: Full=Ras-related protein Rab-7b
gi|26326669|dbj|BAC27078.1| unnamed protein product [Mus musculus]
gi|112293051|dbj|BAF02903.1| Rab42 [Mus musculus]
gi|148707757|gb|EDL39704.1| RIKEN cDNA 5430435G22, isoform CRA_c [Mus musculus]
Length = 199
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPM 119
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 120 VVLGNKIDLE 129
>gi|148236476|ref|NP_001085745.1| MGC80651 protein [Xenopus laevis]
gi|49116806|gb|AAH73279.1| MGC80651 protein [Xenopus laevis]
Length = 201
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S + LK+ I+G G GKTSL+NQYV+K F N Y+ T+GA L+K +Q ++ LQ
Sbjct: 1 MNSGNKVDLKINIIGPMGTGKTSLLNQYVHKWFLNDYQNTLGAHLLSKIIQLDNTNLNLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF++L FY+G+D C+LV+DV +SF L WR++FL + P D FP
Sbjct: 61 IWDTGGQERFRTLVSTFYKGSDGCLLVFDVTDEESFSCLEFWRKDFLDKIPPPAAD-FPM 119
Query: 121 VVLGNKIDVD 130
+VLGNKID+D
Sbjct: 120 IVLGNKIDLD 129
>gi|126306739|ref|XP_001365780.1| PREDICTED: ras-related protein Rab-7b-like [Monodelphis domestica]
Length = 200
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL+NQYV+K F Y+ T+GA L+K + ++ LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLNQYVHKTFYEDYQTTLGASILSKIIMVDNTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV SF L+ WR++ L Q + FP
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDRDSFHALDTWRQDIL-QKTLQTEQVFPI 119
Query: 121 VVLGNKIDVDG 131
VVLGNKID+D
Sbjct: 120 VVLGNKIDLDA 130
>gi|323509277|dbj|BAJ77531.1| cgd7_1680 [Cryptosporidium parvum]
Length = 178
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 71/81 (87%)
Query: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
+F+L IWDTAGQERFQSLGVAFYRGADCC LVYD+ + KSF+ L+ WREEFLIQA+P DP
Sbjct: 25 IFSLWIWDTAGQERFQSLGVAFYRGADCCALVYDMTNPKSFEGLDAWREEFLIQATPKDP 84
Query: 116 DNFPFVVLGNKIDVDGGNSRV 136
++FPFVVLGNK+D+D + +V
Sbjct: 85 NSFPFVVLGNKLDLDQKSRKV 105
>gi|354478109|ref|XP_003501258.1| PREDICTED: ras-related protein Rab-7b-like [Cricetulus griseus]
gi|344236710|gb|EGV92813.1| Ras-related protein Rab-7b [Cricetulus griseus]
Length = 199
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L WR++ L + P + ++P
Sbjct: 61 IWDTGGQERFRSVVSTFYKGSDGCILAFDVTDPESFEALGIWRDDVLAKIIPME-QSYPM 119
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 120 VVLGNKIDLE 129
>gi|119611995|gb|EAW91589.1| RAB7B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119611997|gb|EAW91591.1| RAB7B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
Length = 142
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDV 129
V+LGNKID+
Sbjct: 120 VLLGNKIDL 128
>gi|344276756|ref|XP_003410173.1| PREDICTED: ras-related protein Rab-7b-like [Loxodonta africana]
Length = 158
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M ++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPNKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKVIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILTFDVTDLESFEALDTWRGDVLAKTIPME-QSYPM 119
Query: 121 VVLGNKIDV 129
VVLGNKID+
Sbjct: 120 VVLGNKIDL 128
>gi|395838740|ref|XP_003792266.1| PREDICTED: ras-related protein Rab-7b-like [Otolemur garnettii]
Length = 199
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 92/129 (71%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPQKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D CVL +DV ++SF+ L+ WR++ L + P++ ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALDIWRDDVLAKIVPTE-QSYPM 119
Query: 121 VVLGNKIDV 129
V+LGNKID+
Sbjct: 120 VLLGNKIDL 128
>gi|355745981|gb|EHH50606.1| hypothetical protein EGM_01463 [Macaca fascicularis]
Length = 189
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDV 129
V+LGNKID+
Sbjct: 120 VLLGNKIDL 128
>gi|289742899|gb|ADD20197.1| Ras-related GTPase [Glossina morsitans morsitans]
Length = 252
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P + TLLKV+ILGD GVGK+ LMN++V+ ++ TIG +F+ K+V + +TLQI
Sbjct: 5 PPNKSTLLKVVILGDGGVGKSCLMNRFVSNRYDENNFHTIGVEFMNKDVNVDGEKYTLQI 64
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS-DPDNFPF 120
WDTAGQERF++L FYRG+D C+L Y ++ SF L WREEFL A + + F F
Sbjct: 65 WDTAGQERFRALRTPFYRGSDVCLLCYAIDDHDSFRGLKQWREEFLHYADVNVKSERFSF 124
Query: 121 VVLGNKIDV 129
+V+GNK D+
Sbjct: 125 IVVGNKNDL 133
>gi|109133514|ref|XP_001082679.1| PREDICTED: ras-related protein Rab-7b isoform 2 [Macaca mulatta]
gi|355558838|gb|EHH15618.1| hypothetical protein EGK_01733 [Macaca mulatta]
Length = 189
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDV 129
V+LGNKID+
Sbjct: 120 VLLGNKIDL 128
>gi|402857432|ref|XP_003893259.1| PREDICTED: ras-related protein Rab-7b-like [Papio anubis]
Length = 199
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D CVL +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDV 129
V+LGNKID+
Sbjct: 120 VLLGNKIDL 128
>gi|348578117|ref|XP_003474830.1| PREDICTED: ras-related protein Rab-7b-like [Cavia porcellus]
Length = 196
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++ LK+II+G+ GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPQKKVDLKLIIVGELGVGKTSLLHQYVHKTFYGEYQTTLGASILSKVIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + S +P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDVWRGDILAKMEQS----YPM 116
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 117 VVLGNKIDLE 126
>gi|195436618|ref|XP_002066254.1| GK18197 [Drosophila willistoni]
gi|194162339|gb|EDW77240.1| GK18197 [Drosophila willistoni]
Length = 261
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 88/128 (68%), Gaps = 1/128 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+N++V+ ++ TIG +F+ K++ ++ +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLNRFVSNRYEENNFHTIGVEFMNKDIIVDNEKYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A PD FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLQGLGMWRNEFLNYAD-VKPDKFPFI 124
Query: 122 VLGNKIDV 129
V+GNK D+
Sbjct: 125 VVGNKNDL 132
>gi|296238289|ref|XP_002764097.1| PREDICTED: ras-related protein Rab-7b-like [Callithrix jacchus]
Length = 199
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDV 129
V+LGNKID+
Sbjct: 120 VLLGNKIDL 128
>gi|332864183|ref|XP_528612.3| PREDICTED: ras-related protein Rab-7b, partial [Pan troglodytes]
Length = 174
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDV 129
V+LGNKID+
Sbjct: 120 VLLGNKIDL 128
>gi|392572161|gb|EIW65333.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 399
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE---DRLFTLQIWDTA 65
+K++++G SGVGK+S+ NQY++ +F+ Y+ATIGADF+TK + D L TLQIWDTA
Sbjct: 4 VKLVVIGASGVGKSSIRNQYISGRFTTGYRATIGADFITKTLPHHNVPDELVTLQIWDTA 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP--DNFPFVVL 123
GQERF +L AF+RGAD +L++DVN ++ D L W +F +A D D F VV+
Sbjct: 64 GQERFSALSSAFFRGADAVILMFDVNQPQTLDALTKWWGDFRDKAPVPDEAVDEFCCVVV 123
Query: 124 GNKIDV 129
GNKID+
Sbjct: 124 GNKIDI 129
>gi|390603704|gb|EIN13095.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 443
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 86/126 (68%), Gaps = 5/126 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV---QFEDRLFTLQIWDTA 65
+K++++GDSGVGKTSL QY++ +FS Y+ATIGADF+ K V D TLQIWDTA
Sbjct: 4 IKLVVVGDSGVGKTSLRGQYISGRFSTGYRATIGADFIAKTVPHPHIPDESVTLQIWDTA 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF--VVL 123
GQERF SL AF+RGAD +L++DVN + +L W +EF +A D + F VV+
Sbjct: 64 GQERFSSLSSAFFRGADAVLLIFDVNKPSTLTSLTRWWDEFRAKAPVPDEEAADFCCVVV 123
Query: 124 GNKIDV 129
GNK+D+
Sbjct: 124 GNKMDL 129
>gi|256985158|ref|NP_796377.3| ras-related protein Rab-7b [Homo sapiens]
gi|256985160|ref|NP_001157994.1| ras-related protein Rab-7b [Homo sapiens]
gi|297711722|ref|XP_002832474.1| PREDICTED: ras-related protein Rab-7b-like [Pongo abelii]
gi|397504828|ref|XP_003822982.1| PREDICTED: ras-related protein Rab-7b-like [Pan paniscus]
gi|50401122|sp|Q96AH8.1|RAB7B_HUMAN RecName: Full=Ras-related protein Rab-7b
gi|16877705|gb|AAH17092.1| RAB7B protein [Homo sapiens]
gi|20530864|gb|AAM22519.1| Ras-related protein Rab-7 [Homo sapiens]
gi|387540372|gb|AFJ70813.1| ras-related protein Rab-7b [Macaca mulatta]
gi|410207536|gb|JAA00987.1| RAB7B, member RAS oncogene family [Pan troglodytes]
gi|410249694|gb|JAA12814.1| RAB7B, member RAS oncogene family [Pan troglodytes]
gi|410293164|gb|JAA25182.1| RAB7B, member RAS oncogene family [Pan troglodytes]
gi|410328817|gb|JAA33355.1| RAB7B, member RAS oncogene family [Pan troglodytes]
Length = 199
Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDV 129
V+LGNKID+
Sbjct: 120 VLLGNKIDL 128
>gi|156717682|ref|NP_001096381.1| RAB7B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134023973|gb|AAI35956.1| LOC100124979 protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S + LK+ I+G G GKTSL+NQYV+K F N Y+ T+GA L+K +Q ++ LQ
Sbjct: 1 MNSGNKVDLKINIIGPMGTGKTSLLNQYVHKWFLNDYQNTLGAHLLSKTIQLDNTNLNLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF++L FY+G+D C+LV+DV SF L WR++FL + P D FP
Sbjct: 61 IWDTGGQERFRTLVSTFYKGSDGCLLVFDVTDEDSFSCLEFWRKDFLDKIPPPIAD-FPM 119
Query: 121 VVLGNKIDVD 130
+VLGNKID++
Sbjct: 120 IVLGNKIDLN 129
>gi|387598287|gb|AFJ91799.1| RAB9 member RAS oncogene family, partial [Ostrea edulis]
Length = 126
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 81/105 (77%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S++ LLKV++LGD GVGK+SLMN++V+ KF Q TIG +FL K+V +E +T+QIW
Sbjct: 22 SQKSKLLKVVLLGDGGVGKSSLMNRFVSNKFDAQSFHTIGVEFLNKDVTYEGENYTMQIW 81
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFL 107
DTAGQERF+SL FYRGADCC+L + V+ ++SF NL W++EFL
Sbjct: 82 DTAGQERFKSLRTPFYRGADCCLLTFAVDDIQSFKNLAMWKKEFL 126
>gi|123504513|ref|XP_001328770.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736250|gb|AAX97454.1| small Rab GTPase Rab7b [Trichomonas vaginalis]
gi|121911717|gb|EAY16547.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 202
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 84/122 (68%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
KV++LGD+GVGKT+L++Q+VN +F +KATIGADF +K + + + +QIWDTAGQE
Sbjct: 10 FKVVVLGDTGVGKTTLIHQFVNGEFIADFKATIGADFSSKIMTVDGQRIYIQIWDTAGQE 69
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF ++G FYRG D C+LVYD ++SF L+ WRE+ ++ FP ++ NK D
Sbjct: 70 RFHAVGATFYRGTDACILVYDCTQVESFHRLSFWREDLFTKSQMEPDPKFPIIIFSNKSD 129
Query: 129 VD 130
++
Sbjct: 130 LE 131
>gi|195049918|ref|XP_001992789.1| GH13450 [Drosophila grimshawi]
gi|193899848|gb|EDV98714.1| GH13450 [Drosophila grimshawi]
Length = 266
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKVIILGD GVGK++L+ ++V+ ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVIILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMDKDIAVDGEKYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A +PD FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDMCLLCYALDDRDSLRGLRLWRNEFLNYAD-VEPDRFPFI 124
Query: 122 VLGNKIDVDGGNSRV 136
V+GNK D+ +V
Sbjct: 125 VVGNKNDIRAEKRQV 139
>gi|426359976|ref|XP_004047229.1| PREDICTED: ras-related protein Rab-7b-like [Gorilla gorilla
gorilla]
Length = 251
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDV 129
V+LGNKID+
Sbjct: 120 VLLGNKIDL 128
>gi|409050838|gb|EKM60314.1| hypothetical protein PHACADRAFT_50904, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 128
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 89/125 (71%), Gaps = 5/125 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE---DRLFTLQIWDTA 65
LK++++G SGVGKTSL NQYV+ +F+ Y+ATIGADF+TK V D L TLQIWDTA
Sbjct: 4 LKLVVVGASGVGKTSLRNQYVSGRFTTGYRATIGADFITKSVPHHGNPDELVTLQIWDTA 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP--DNFPFVVL 123
GQERF SL AF+RGAD +L++DVN ++ + L W ++F +A +D D+F V +
Sbjct: 64 GQERFSSLSSAFFRGADAVLLMFDVNQPQTLEALRKWWDDFRDKAPVADDEVDSFCSVFV 123
Query: 124 GNKID 128
GNKID
Sbjct: 124 GNKID 128
>gi|291416488|ref|XP_002724479.1| PREDICTED: RAB7B, member RAS oncogene family, partial [Oryctolagus
cuniculus]
Length = 140
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++ LK+II+G GVGKTSL++QYV+ F Y+ T+GA L+K ++ ED LQ
Sbjct: 1 MNPQKKVDLKLIIVGALGVGKTSLLHQYVHNTFYEDYQTTLGASILSKIIRVEDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + +P
Sbjct: 61 IWDTGGQERFRSVVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIIPVE-QPYPM 119
Query: 121 VVLGNKIDV 129
VVLGNKID+
Sbjct: 120 VVLGNKIDL 128
>gi|350591497|ref|XP_003483284.1| PREDICTED: ras-related protein Rab-7a-like [Sus scrofa]
Length = 214
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 67/76 (88%)
Query: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
L + QIWDTAGQERFQSLGVAFYRGADCCVLV+DV + +F L++WR+EFLIQASP DP
Sbjct: 63 LLSPQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP 122
Query: 116 DNFPFVVLGNKIDVDG 131
+NFPFVVLGNKID++
Sbjct: 123 ENFPFVVLGNKIDLEN 138
>gi|403413275|emb|CCL99975.1| predicted protein [Fibroporia radiculosa]
Length = 391
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 86/126 (68%), Gaps = 5/126 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF---EDRLFTLQIWDTA 65
+KV+++G SGVGKTSL NQY++ +F+ Y+ATIGADF+TK V + TLQIWDTA
Sbjct: 4 VKVVVIGASGVGKTSLRNQYISGRFTTGYRATIGADFITKSVPHYNSPEENITLQIWDTA 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP--DNFPFVVL 123
GQERF SL AF+RGAD +L++DVN S L W EF +A D ++F VV+
Sbjct: 64 GQERFSSLSSAFFRGADAAILIFDVNQPDSLRALVRWWSEFRDKAPIPDEEVEDFCCVVV 123
Query: 124 GNKIDV 129
GNKID+
Sbjct: 124 GNKIDM 129
>gi|66806927|ref|XP_637186.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74996730|sp|Q54K69.1|RAB7B_DICDI RecName: Full=Ras-related protein Rab-7B
gi|60465594|gb|EAL63676.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 197
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
++ R ++KV+I+G+ VGKTS++ +YV+K+F K TIG DF V + + TLQ+W
Sbjct: 2 TKGRKIIKVVIIGEKSVGKTSILRRYVDKRFVT-LKPTIGVDF----VMVSENMVTLQLW 56
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DT+GQERF+SL +++YRGAD C+LV+DV + K+ +L WR++F+ + DP FPF++
Sbjct: 57 DTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFII 116
Query: 123 LGNKID 128
LGNKID
Sbjct: 117 LGNKID 122
>gi|403294876|ref|XP_003938388.1| PREDICTED: ras-related protein Rab-7b-like [Saimiri boliviensis
boliviensis]
Length = 199
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPQKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKIDV 129
V+LGNKID+
Sbjct: 120 VLLGNKIDL 128
>gi|193683808|ref|XP_001946007.1| PREDICTED: ras-related protein Rab-9B-like [Acyrthosiphon pisum]
Length = 217
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
++ +LKV+ILG+S VGK+ LMN++V+ FS+ T+G +FL KE+ ++TLQIWD
Sbjct: 9 KQNPILKVVILGNSNVGKSCLMNRFVSNSFSDHTLHTLGVEFLQKELDVNGIVYTLQIWD 68
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF++L FYRG D C+L + V+ ++SF +++W++EFL + +D NFPF+V+
Sbjct: 69 TAGQERFRTLRTPFYRGTDICLLTFAVDDVQSFKTVDSWKKEFLHYSKTTDV-NFPFLVV 127
Query: 124 GNKIDV 129
K+D+
Sbjct: 128 ATKVDL 133
>gi|392586651|gb|EIW75987.1| hypothetical protein CONPUDRAFT_42859, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 128
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 86/125 (68%), Gaps = 5/125 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE---DRLFTLQIWDTA 65
+K++++G SGVGKTSL QY++ +FS Y+ATIGADF+TK + D TLQIWDTA
Sbjct: 4 VKLVVIGPSGVGKTSLRGQYISGRFSTGYRATIGADFITKTLPHPTNPDESVTLQIWDTA 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP--DNFPFVVL 123
GQERF SL AF+RGAD +L++DVNS S L W + F A +D D++P VV+
Sbjct: 64 GQERFSSLSSAFFRGADAAMLMFDVNSRDSLHALAKWWDAFRQNAPLADDEMDDYPCVVV 123
Query: 124 GNKID 128
GNK+D
Sbjct: 124 GNKVD 128
>gi|357620515|gb|EHJ72673.1| putative ras-related protein Rab-9 [Danaus plexippus]
Length = 228
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ + LLK++ILGD GVGK+ LM+++++ F + TIG +F+ K ++ + +TLQIW
Sbjct: 13 ANKSVLLKIVILGDGGVGKSCLMSRFISNHFDDHNFHTIGVEFMNKMIEVGGKQYTLQIW 72
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP-DNFPFV 121
DTAGQERF+SL FYRG D C+L Y ++ SF+N+ W EFL A + + FPF+
Sbjct: 73 DTAGQERFKSLRTPFYRGTDICILAYAIDDRSSFNNIKTWLNEFLNYAGVKNGIEKFPFI 132
Query: 122 VLGNKIDVDGGNSRV 136
V+GNK DV + V
Sbjct: 133 VVGNKSDVSSKDREV 147
>gi|195115182|ref|XP_002002143.1| GI14033 [Drosophila mojavensis]
gi|193912718|gb|EDW11585.1| GI14033 [Drosophila mojavensis]
Length = 264
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V+ ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMNKDIAVDGEKYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EF I + PD FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDMCLLCYALDDRDSLRGLRLWRNEF-INYADVQPDRFPFI 124
Query: 122 VLGNKIDVDGGNSRV 136
V+GNK D+ +V
Sbjct: 125 VVGNKNDIRAERRQV 139
>gi|380806729|gb|AFE75240.1| ras-related protein Rab-7b, partial [Macaca mulatta]
Length = 133
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQIWDT GQE
Sbjct: 1 LKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWDTGGQE 60
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P V+LGNKID
Sbjct: 61 RFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPMVLLGNKID 119
Query: 129 V 129
+
Sbjct: 120 L 120
>gi|395531204|ref|XP_003767672.1| PREDICTED: ras-related protein Rab-7b-like [Sarcophilus harrisii]
Length = 200
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + ++ LK+II+G GVGKTSL++QYV+K F Y+ T+GA L+K + ++ LQ
Sbjct: 1 MDAMKKIDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKVIMIDNTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV + SF L+ WR + L + P + FP
Sbjct: 61 IWDTGGQERFRSIISTFYKGSDGCILAFDVTNRDSFHALDIWRGDILQKVVPME-QVFPM 119
Query: 121 VVLGNKIDVD 130
VVLGNKID+D
Sbjct: 120 VVLGNKIDLD 129
>gi|336381640|gb|EGO22791.1| hypothetical protein SERLADRAFT_471213 [Serpula lacrymans var.
lacrymans S7.9]
Length = 383
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 92/138 (66%), Gaps = 5/138 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE---DRLFTLQIWDTA 65
+K++++G SGVGKTSL QY++ +FS Y+ATIGADF++K + D+ TLQIWDTA
Sbjct: 4 VKLVVIGASGVGKTSLRTQYISGRFSTGYRATIGADFISKTLPHPTKPDQSVTLQIWDTA 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP--DNFPFVVL 123
GQERF SL AF+RGAD +L++DVN ++ L W +F +A SD +++ VV+
Sbjct: 64 GQERFSSLSAAFFRGADAALLMFDVNKPETLTALTRWWSQFREKAPLSDDELEDYCCVVV 123
Query: 124 GNKIDVDGGNSRVVCFGE 141
GNKIDV +RV E
Sbjct: 124 GNKIDVVDPYARVPPVSE 141
>gi|167390463|ref|XP_001733474.1| GTP-binding protein ypt7 [Entamoeba dispar SAW760]
gi|165896943|gb|EDR24231.1| GTP-binding protein ypt7, putative [Entamoeba dispar SAW760]
Length = 152
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 77/105 (73%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R L K I++GDSGVGKTSL+N+YVN +FS+ YKATIG+DFL K V +TLQIWDT
Sbjct: 4 RPALFKAILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVTVNGAQYTLQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQ 109
AG ER+ + FYRG+DCCVL +DV + +SF++L W+ L++
Sbjct: 64 AGHERYSCVVTTFYRGSDCCVLCFDVTNRESFNHLEKWKMSSLME 108
>gi|194879572|ref|XP_001974257.1| GG21181 [Drosophila erecta]
gi|190657444|gb|EDV54657.1| GG21181 [Drosophila erecta]
Length = 255
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V+ ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMNKDIVVDGERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A D D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGLWRNEFLNYAD-VDQDKFPFI 124
Query: 122 VLGNKIDVDGGNSRV 136
V+GNK D+ +V
Sbjct: 125 VVGNKNDIPAQKRQV 139
>gi|389750660|gb|EIM91733.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 234
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE---DRLFTLQIWDTA 65
+K++++G+SGVGKTSL QY++ +FS Y+ATIGADF+TK + TLQIWDTA
Sbjct: 4 IKLVVIGNSGVGKTSLRGQYISGRFSTGYRATIGADFITKTLPHPTNPKETVTLQIWDTA 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQA--SPSDPDNFPFVVL 123
GQERF SL AF+RGAD +L+YDVN S L+ W +EF A + D +++ VV+
Sbjct: 64 GQERFSSLSSAFFRGADAALLMYDVNQPSSLRALDKWWDEFCTNAPLAEEDMEDYCCVVV 123
Query: 124 GNKIDV 129
GNK+D+
Sbjct: 124 GNKMDL 129
>gi|154550431|gb|ABS83490.1| Rab7 [Haliotis cracherodii]
Length = 100
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 66/73 (90%)
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
T+QIWDTAGQERFQSLGVAFYRGADCCVLV+DV +F NL+ WR+EFLIQASP DP++
Sbjct: 1 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTMPNTFKNLDGWRDEFLIQASPRDPEH 60
Query: 118 FPFVVLGNKIDVD 130
FPFVV+GNKID++
Sbjct: 61 FPFVVIGNKIDLE 73
>gi|403347422|gb|EJY73133.1| Ras-related protein RABG2 [Oxytricha trifallax]
Length = 234
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 91/132 (68%), Gaps = 9/132 (6%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV--------QFEDRL 56
+++ LKVII+GDSGVGKTSL+ + +K K TIGA+F K++ +++ +
Sbjct: 2 QKSFLKVIIIGDSGVGKTSLLEAFNYQKIQKNSKPTIGAEFTKKKITLGDYPDSKYKGKE 61
Query: 57 FTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPD 116
LQ+WDTAGQERFQSL +FYRG+DCC+LV+DV+ ++++++L+NWRE F Q +
Sbjct: 62 VNLQLWDTAGQERFQSLCTSFYRGSDCCMLVFDVSQIETYESLDNWREVFQ-QTTGDQTQ 120
Query: 117 NFPFVVLGNKID 128
P +++GNK D
Sbjct: 121 EIPIILIGNKSD 132
>gi|393219105|gb|EJD04593.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 479
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 65/126 (51%), Positives = 85/126 (67%), Gaps = 5/126 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF---EDRLFTLQIWDTA 65
+K++I+GDSGVGKTSL NQY+ +FS Y+ATIG DF+TK V + TLQIWDTA
Sbjct: 4 IKLVIIGDSGVGKTSLRNQYIMGRFSTGYRATIGTDFITKTVPHYLNPEESVTLQIWDTA 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSD--PDNFPFVVL 123
GQERF SL AF+RGAD +L++DVN ++ L W + F A D ++F VV+
Sbjct: 64 GQERFSSLSTAFFRGADAALLMFDVNRPETLSALTKWWDSFKAHAPVPDEEAEDFCCVVV 123
Query: 124 GNKIDV 129
GNKID+
Sbjct: 124 GNKIDL 129
>gi|195345093|ref|XP_002039110.1| GM17348 [Drosophila sechellia]
gi|194134240|gb|EDW55756.1| GM17348 [Drosophila sechellia]
Length = 255
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 87/135 (64%), Gaps = 1/135 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVIDGERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A D D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYAD-VDQDKFPFI 124
Query: 122 VLGNKIDVDGGNSRV 136
V+GNK D+ +V
Sbjct: 125 VVGNKNDIPAQKRQV 139
>gi|195484453|ref|XP_002090701.1| GE13254 [Drosophila yakuba]
gi|194176802|gb|EDW90413.1| GE13254 [Drosophila yakuba]
Length = 260
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V+ ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMNKDIVVDGERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A D D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGLWRNEFLNYAD-VDQDKFPFI 124
Query: 122 VLGNKIDVDGGNSRV 136
V+GNK D+ +V
Sbjct: 125 VVGNKNDIPAQKRQV 139
>gi|19921534|ref|NP_609966.1| Rab9 [Drosophila melanogaster]
gi|7298580|gb|AAF53798.1| Rab9 [Drosophila melanogaster]
gi|17945413|gb|AAL48761.1| RE17845p [Drosophila melanogaster]
gi|220948020|gb|ACL86553.1| Rab9-PA [synthetic construct]
gi|220960432|gb|ACL92752.1| Rab9-PA [synthetic construct]
Length = 256
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 87/135 (64%), Gaps = 1/135 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A D D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYAD-VDQDKFPFI 124
Query: 122 VLGNKIDVDGGNSRV 136
V+GNK D+ +V
Sbjct: 125 VVGNKNDIPAQKRQV 139
>gi|125985004|ref|XP_001356266.1| GA22174 [Drosophila pseudoobscura pseudoobscura]
gi|195164658|ref|XP_002023163.1| GL21209 [Drosophila persimilis]
gi|54644588|gb|EAL33329.1| GA22174 [Drosophila pseudoobscura pseudoobscura]
gi|194105248|gb|EDW27291.1| GL21209 [Drosophila persimilis]
Length = 259
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V+ ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMNKDIVVDGEQYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A + D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLRGLGLWRNEFLTYAD-VEADKFPFI 124
Query: 122 VLGNKIDV 129
V+GNK D+
Sbjct: 125 VVGNKNDI 132
>gi|440793725|gb|ELR14901.1| Rab7/RabGfamily small GTPase [Acanthamoeba castellanii str. Neff]
Length = 186
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 83/123 (67%), Gaps = 22/123 (17%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ KV++LGDSGVGK+SL+ ++ +K+FS YKATIGADF+T ++ + R TLQ+W
Sbjct: 5 VAKVVLLGDSGVGKSSLLTRFTDKRFSGAYKATIGADFVTHDLIVDGREVTLQVW----- 59
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERFQSLG AF+RGADCCVLV+DVN A+PS + FPF+VLGNK
Sbjct: 60 ERFQSLGTAFFRGADCCVLVFDVNV-----------------AAPSMAERFPFIVLGNKT 102
Query: 128 DVD 130
D D
Sbjct: 103 DKD 105
>gi|195580161|ref|XP_002079924.1| GD24206 [Drosophila simulans]
gi|194191933|gb|EDX05509.1| GD24206 [Drosophila simulans]
Length = 255
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 87/135 (64%), Gaps = 1/135 (0%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P ++ LLKV+ILGD GVGK++L+ ++V ++ TIG +F+ K++ + +TLQI
Sbjct: 6 PPQKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQI 65
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF++L FYRG+D C+L Y ++ S L WR EFL A D D FPF+
Sbjct: 66 WDTAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYAD-VDQDKFPFI 124
Query: 122 VLGNKIDVDGGNSRV 136
V+GNK D+ +V
Sbjct: 125 VVGNKNDIPAQKRQV 139
>gi|440792353|gb|ELR13578.1| RAB family member (rab7), putative [Acanthamoeba castellanii str.
Neff]
Length = 206
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 83/123 (67%), Gaps = 2/123 (1%)
Query: 15 GDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLG 74
GD+ VGKTSLM +YV + YKATIGADFL K+V +D T+QIWDTAGQ+RF +LG
Sbjct: 16 GDASVGKTSLMQRYVKGGYKEGYKATIGADFLPKDVVVQDHFVTMQIWDTAGQDRFDTLG 75
Query: 75 VAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNS 134
FYRG D CV VYDV + S +N++ W+++++ S + + F V GNK D++ +
Sbjct: 76 RVFYRGTDICVFVYDVTNPASLENIHKWKQQYVEAQSSTMDGHTVFAVFGNKADLE--DK 133
Query: 135 RVV 137
RVV
Sbjct: 134 RVV 136
>gi|167519497|ref|XP_001744088.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777174|gb|EDQ90791.1| predicted protein [Monosiga brevicollis MX1]
Length = 144
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/70 (81%), Positives = 64/70 (91%)
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV KSF+ L +WR+EFLIQASP DP+NFPF
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPKSFETLGSWRDEFLIQASPRDPENFPF 60
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 61 VVLGNKIDLE 70
>gi|67467937|ref|XP_650041.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466592|gb|EAL44655.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790084|dbj|BAD82838.1| small GTPase EhRabX2 [Entamoeba histolytica]
gi|449706292|gb|EMD46168.1| small GTPase EhRabX2, putative [Entamoeba histolytica KU27]
Length = 204
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 87/126 (69%), Gaps = 4/126 (3%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R LK+I+LGDS VGKTSL+NQ+VN+K+S++YK+TIG D TK + +D+L +LQIWD
Sbjct: 3 ERITLKIIVLGDSFVGKTSLINQFVNRKYSSEYKSTIGVDLSTKVISIKDQLVSLQIWDP 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
+G ERF+ + +F+RG D CVLV V S++SF++ +W + + N PFV +
Sbjct: 63 SGTERFRCISESFFRGTDGCVLVCSVTSIESFNSFESWMSDIINHIGY----NVPFVAVA 118
Query: 125 NKIDVD 130
NK D+D
Sbjct: 119 NKSDLD 124
>gi|407034621|gb|EKE37306.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 204
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 87/126 (69%), Gaps = 4/126 (3%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R LK+I+LGDS VGKTSL+NQ+VN+K+S++YK+TIG D TK + +D+L +LQIWD
Sbjct: 3 ERITLKIIVLGDSFVGKTSLINQFVNRKYSSEYKSTIGVDLSTKVISIKDQLVSLQIWDP 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
+G ERF+ + +F+RG D CVLV V S++SF++ +W + + N PFV +
Sbjct: 63 SGTERFRCISESFFRGTDGCVLVCSVTSIESFNSFESWMTDIINHIGY----NVPFVAVA 118
Query: 125 NKIDVD 130
NK D+D
Sbjct: 119 NKSDLD 124
>gi|353237420|emb|CCA69393.1| probable GTPase Rab7 protein [Piriformospora indica DSM 11827]
Length = 455
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 82/126 (65%), Gaps = 5/126 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV---QFEDRLFTLQIWDTA 65
+K++I+G SGVGKTSL +Y + +FS Y+ATIGADFLTK + D LQIWDTA
Sbjct: 4 VKLVIVGASGVGKTSLRTKYTSGRFSTNYRATIGADFLTKTIPHPSIPDETVQLQIWDTA 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSD--PDNFPFVVL 123
GQERF L AF+RGAD +LVYDV S D+L W EF ++ + +FP V+
Sbjct: 64 GQERFSGLSSAFFRGADAVILVYDVTDPLSLDSLTRWWNEFKMRCPIEEGAEADFPVAVV 123
Query: 124 GNKIDV 129
GNK+D+
Sbjct: 124 GNKMDL 129
>gi|291236635|ref|XP_002738246.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 348
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 64/70 (91%)
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F +L++WR+EFLIQASP DP+NFPF
Sbjct: 204 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTMPNTFKSLDSWRDEFLIQASPRDPENFPF 263
Query: 121 VVLGNKIDVD 130
VVLGNKID++
Sbjct: 264 VVLGNKIDLE 273
>gi|294910031|ref|XP_002777881.1| GTPase, putative [Perkinsus marinus ATCC 50983]
gi|239885856|gb|EER09676.1| GTPase, putative [Perkinsus marinus ATCC 50983]
Length = 75
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/70 (85%), Positives = 65/70 (92%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
R++ LLKVIILGDSGVGKTSLMNQYVNKKFS QYKATIGADFLTKEV +D++ TLQIWD
Sbjct: 6 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTIDDKVVTLQIWD 65
Query: 64 TAGQERFQSL 73
TAGQERFQSL
Sbjct: 66 TAGQERFQSL 75
>gi|440297613|gb|ELP90270.1| ehrab7g protein, putative [Entamoeba invadens IP1]
Length = 193
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 92/149 (61%), Gaps = 9/149 (6%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ K+I++G+SGVGKTSL+N+YV F YK+TIG DFL+K VQ+E + LQIWDTAG
Sbjct: 6 MFKIILIGESGVGKTSLINRYVENSFDPVYKSTIGCDFLSKNVQYEGVEYVLQIWDTAGH 65
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E+F S+ +FYRG+D +V+DV SF NL++W EF S S ++ P +V GNK
Sbjct: 66 EKFSSMISSFYRGSDGAFVVFDVTDTASFSNLDSWINEF----SGSINNDVPIIVCGNKT 121
Query: 128 DVDGGNSRVVCFGEEGSSMVCLQRKYSLL 156
D++ C + C R Y+ +
Sbjct: 122 DLENR-----CVPTASAQQWCDLRNYTYV 145
>gi|215259749|gb|ACJ64366.1| Ras-related GTPase [Culex tarsalis]
Length = 147
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 63/70 (90%)
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERFQSLGVAFYRGADCCVLVYD + +F NL++WR+EFLIQASP DPD+FPFV
Sbjct: 1 WDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPFV 60
Query: 122 VLGNKIDVDG 131
VLGNKID++
Sbjct: 61 VLGNKIDLEN 70
>gi|123429816|ref|XP_001307759.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121889406|gb|EAX94829.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 191
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 84/119 (70%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
KVI+LGDS VGKT+L+++Y++ ++ N +KAT+G + TK +D+ IWDTAG ER
Sbjct: 5 KVILLGDSCVGKTTLIHRYISGEYRNDFKATLGTNITTKIYTKDDKDIEAAIWDTAGTER 64
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
F+S+ YR AD C+LV+D S+++F NL+NWR++ L A + D+FPF+V GNK D
Sbjct: 65 FKSISSIHYRDADACILVFDYTSLETFHNLSNWRQDVLSSAGIKNLDSFPFIVAGNKCD 123
>gi|167387053|ref|XP_001738005.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898967|gb|EDR25691.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 204
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 86/126 (68%), Gaps = 4/126 (3%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R LK+I+LGDS VGKTSL+NQ+VN+K+S++YK+TIG D TK + +D+L +LQIWD
Sbjct: 3 ERITLKIIVLGDSFVGKTSLINQFVNRKYSSEYKSTIGVDLSTKAMSVKDQLVSLQIWDP 62
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
+G ERF+ + +F+RG D CVLV V S++SF++ +W + N PFV +
Sbjct: 63 SGTERFRCISDSFFRGTDGCVLVCSVTSIESFNSFESWMNDITNHIGY----NVPFVAVA 118
Query: 125 NKIDVD 130
NK D+D
Sbjct: 119 NKSDLD 124
>gi|440893582|gb|ELR46290.1| Ras-related protein Rab-7b [Bos grunniens mutus]
Length = 212
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 89/142 (62%), Gaps = 13/142 (9%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R++ LK+II+G GVGKTSL+++YV+K F Y+ T+GA L+K + ED LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQ 60
Query: 61 ------------IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLI 108
+WDT GQERF+S+ FY+G+D CVL +DV ++SF+ L WR + L
Sbjct: 61 PLITAPWGHCSFLWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLA 120
Query: 109 QASPSDPDNFPFVVLGNKIDVD 130
+ P + +P VVLGNKID++
Sbjct: 121 KTIPME-QPYPMVVLGNKIDLE 141
>gi|385303488|gb|EIF47559.1| rab7 family [Dekkera bruxellensis AWRI1499]
Length = 219
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 87/121 (71%), Gaps = 4/121 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-EDRLFTLQIWDTAGQ 67
+KV++LGD VGKTSL +QY+ + FS+ YKATIGADFL K V+ +D++ LQIWDTAGQ
Sbjct: 12 VKVVLLGDQSVGKTSLRSQYLYRYFSSMYKATIGADFLMKRVRTPDDQIMDLQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF ++ AFYRGAD V+VYD+ + +SF +L W ++F+ + S P +++GNK
Sbjct: 72 ERFNAVSRAFYRGADIGVIVYDITNAESFYHLTKWVDDFVANSGGSRP---YLMIVGNKR 128
Query: 128 D 128
D
Sbjct: 129 D 129
>gi|440295276|gb|ELP88189.1| hypothetical protein EIN_224320 [Entamoeba invadens IP1]
Length = 193
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 86/122 (70%), Gaps = 4/122 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LK+++LGDS VGKTSL+NQ+VN+K+S YK+T+G D T+++ ED++ L +WD +G E
Sbjct: 7 LKILVLGDSFVGKTSLINQFVNRKYSCDYKSTVGVDLSTRQISIEDKMVCLNVWDPSGTE 66
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+ + F+RG D C+LV + S +SF++L +W++E + + S S PFV + NK D
Sbjct: 67 RFRCVSDNFFRGTDGCILVCSLTSKESFEDLASWKDEIVQRTSSS----IPFVAVANKSD 122
Query: 129 VD 130
VD
Sbjct: 123 VD 124
>gi|170117485|ref|XP_001889929.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635065|gb|EDQ99378.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 128
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 84/125 (67%), Gaps = 5/125 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE---DRLFTLQIWDTA 65
+K++++G SGVGKTSL +Y++ +FS Y+ATIGADF+TK V D TLQIWDTA
Sbjct: 4 IKLVVIGASGVGKTSLRGKYISGRFSTGYRATIGADFITKTVPHPRNPDESVTLQIWDTA 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF--VVL 123
GQERF SL AF+RGAD +L++DV S +S L W +F +A D D + VV+
Sbjct: 64 GQERFSSLSSAFFRGADAALLIFDVTSPESMHALKKWWNDFKDKAPVEDGDVHEYCCVVV 123
Query: 124 GNKID 128
GNK+D
Sbjct: 124 GNKMD 128
>gi|440297956|gb|ELP90597.1| ehrab7g protein, putative [Entamoeba invadens IP1]
Length = 197
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 93/149 (62%), Gaps = 8/149 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+LK+I++G SGVGKTS++ ++V KF YK+TIG DFL K V + R ++LQIWDTAG
Sbjct: 7 MLKIILIGSSGVGKTSIIQRFVTNKFDPIYKSTIGCDFLAKTVNVDGRDYSLQIWDTAGH 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF S+ +FYRG+D ++V+DV S SF +++ W EF + P V+ NK+
Sbjct: 67 ERFSSIVNSFYRGSDGAIVVFDVTSPPSFTDISGWIGEF---EKGVNSKEVPIVIAANKV 123
Query: 128 DVDGGNSRVVCFGEEGSSMVCLQRKYSLL 156
DVD SR+V EE + R Y+ +
Sbjct: 124 DVD---SRMVS--EETGRQWAVGRGYTYV 147
>gi|336368840|gb|EGN97182.1| hypothetical protein SERLA73DRAFT_123963 [Serpula lacrymans var.
lacrymans S7.3]
Length = 140
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 87/125 (69%), Gaps = 5/125 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE---DRLFTLQIWDTA 65
+K++++G SGVGKTSL QY++ +FS Y+ATIGADF++K + D+ TLQIWDTA
Sbjct: 4 VKLVVIGASGVGKTSLRTQYISGRFSTGYRATIGADFISKTLPHPTKPDQSVTLQIWDTA 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP--DNFPFVVL 123
GQERF SL AF+RGAD +L++DVN ++ L W +F +A SD +++ VV+
Sbjct: 64 GQERFSSLSAAFFRGADAALLMFDVNKPETLTALTRWWSQFREKAPLSDDELEDYCCVVV 123
Query: 124 GNKID 128
GNKID
Sbjct: 124 GNKID 128
>gi|167391375|ref|XP_001739748.1| GTP-binding protein ypt7 [Entamoeba dispar SAW760]
gi|165896450|gb|EDR23858.1| GTP-binding protein ypt7, putative [Entamoeba dispar SAW760]
Length = 190
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 93/149 (62%), Gaps = 8/149 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+LK+I++G+SGVGKTSL+ +YV KF + YK TIG DFL K V E++ + LQIWDTAG
Sbjct: 1 MLKLILIGESGVGKTSLIQRYVMNKFDSTYKTTIGCDFLAKTVYVENKEYNLQIWDTAGH 60
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E+F S+ +FYRG+D ++V+DV + SF ++ W E+ + + + P ++ GNK+
Sbjct: 61 EKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWINEY---SRALNGKDVPIIICGNKV 117
Query: 128 DVDGGNSRVVCFGEEGSSMVCLQRKYSLL 156
D R+V E + C R YS +
Sbjct: 118 DC---QPRLV--STESARQWCEGRNYSYI 141
>gi|302672637|ref|XP_003026006.1| hypothetical protein SCHCODRAFT_36505 [Schizophyllum commune H4-8]
gi|300099686|gb|EFI91103.1| hypothetical protein SCHCODRAFT_36505 [Schizophyllum commune H4-8]
Length = 135
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 5/128 (3%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE---DRLFTLQIWD 63
+ +K++I+G SGVGKTSL QY++ +FS Y+ATIGADF+TK + D LQIWD
Sbjct: 6 STIKLVIIGPSGVGKTSLRGQYISGRFSAGYRATIGADFITKTLPHPSRPDESVVLQIWD 65
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPD--NFPFV 121
TAGQERF SL AF+RGAD VL +D N +S +L W +EF + +D D + V
Sbjct: 66 TAGQERFSSLSSAFFRGADAAVLCFDANDRQSMRSLTKWWDEFKQRTPVADEDLEEYCCV 125
Query: 122 VLGNKIDV 129
V+GNK D+
Sbjct: 126 VVGNKTDL 133
>gi|2190|emb|CAA39797.1| rab9 [Canis lupus familiaris]
Length = 172
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 73/98 (74%)
Query: 32 KFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN 91
KF Q TIG +FL K+++ + T+QIWDTAGQERF+SL FYRG+DCC+L + V+
Sbjct: 2 KFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVD 61
Query: 92 SMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
+SF NL+NW++EF+ A +P++FPFV+LGNKID+
Sbjct: 62 DSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDI 99
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 86/127 (67%), Gaps = 5/127 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ KV+++GDSGVGK+ L+N++V +F + KATIG +FLTK V + ++ QIWDTAGQ
Sbjct: 15 MFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMDHKVVKAQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER+Q++ A+YRGA +L YD+ + +SFD++ W +E + A DN +++GNK
Sbjct: 75 ERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHA-----DNIIVMLVGNKS 129
Query: 128 DVDGGNS 134
D+ G +
Sbjct: 130 DLSSGRA 136
>gi|395323676|gb|EJF56138.1| hypothetical protein DICSQDRAFT_39552, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 129
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 85/126 (67%), Gaps = 5/126 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE---DRLFTLQIWDTA 65
+K++++G SGVGK+S+ NQY++ +F+ Y+ATIGADF+TK + D TLQIWDTA
Sbjct: 4 VKLVVIGASGVGKSSIRNQYISGRFTTGYRATIGADFITKTLPHHNCPDEQVTLQIWDTA 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP--DNFPFVVL 123
GQERF L AF+RGAD +L++DVN + L W ++F +A SD + F VV+
Sbjct: 64 GQERFSGLSSAFFRGADAVILMFDVNQPHTLGALTKWWDDFRDKAPVSDERVEEFCCVVV 123
Query: 124 GNKIDV 129
GNK D+
Sbjct: 124 GNKTDI 129
>gi|67482255|ref|XP_656477.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978614|dbj|BAD34974.1| EhRab7G protein [Entamoeba histolytica]
gi|56473678|gb|EAL51093.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708325|gb|EMD47807.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 190
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 91/149 (61%), Gaps = 8/149 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+LK+I++G+SGVGKTSL+ +YV KF YK TIG DFL K V E++ + LQIWDTAG
Sbjct: 1 MLKLILIGESGVGKTSLIQRYVMNKFEPTYKTTIGCDFLAKTVYVENKEYNLQIWDTAGH 60
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E+F S+ +FYRG+D ++V+DV + SF ++ W E+ + D P ++ GNK+
Sbjct: 61 EKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWISEYSRALNGKD---VPIIICGNKV 117
Query: 128 DVDGGNSRVVCFGEEGSSMVCLQRKYSLL 156
D R+V E + C R YS +
Sbjct: 118 DC---QPRLV--STESARQWCEGRNYSYI 141
>gi|409077108|gb|EKM77475.1| hypothetical protein AGABI1DRAFT_108006 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 414
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR---LFTLQIWDTA 65
+K++++G SGVGKTS+ Q+++ FS+ Y+ATIGADF+ K + + TLQIWDTA
Sbjct: 12 IKLVVVGASGVGKTSIRGQFISGGFSSGYRATIGADFIAKTLPHPTKPENTVTLQIWDTA 71
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPD--NFPFVVL 123
GQERF SL AF+RGAD +L++DV+ +S + L W EF + ++ D P ++
Sbjct: 72 GQERFSSLSTAFFRGADAVILMFDVHRPESLEALKKWWAEFCVGVPLAEEDYPEHPCFIV 131
Query: 124 GNKIDVD 130
GNKID++
Sbjct: 132 GNKIDLE 138
>gi|426191846|gb|EKV41785.1| hypothetical protein AGABI2DRAFT_181617 [Agaricus bisporus var.
bisporus H97]
Length = 414
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR---LFTLQIWDTA 65
+K++++G SGVGKTS+ Q+++ FS+ Y+ATIGADF+ K + + TLQIWDTA
Sbjct: 12 IKLVVVGASGVGKTSIRGQFISGGFSSGYRATIGADFIAKTLPHPTKPENTVTLQIWDTA 71
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPD--NFPFVVL 123
GQERF SL AF+RGAD +L++DV+ +S + L W EF + ++ D P ++
Sbjct: 72 GQERFSSLSTAFFRGADAVILMFDVHRPESLEALKKWWAEFCVGVPLAEEDYPEHPCFIV 131
Query: 124 GNKIDVD 130
GNKID++
Sbjct: 132 GNKIDLE 138
>gi|388579111|gb|EIM19439.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 260
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
+K++++G+SG GKTSL NQY++ +F+N YK+TIGADF +K++Q L IWDTAGQE
Sbjct: 8 VKLVLIGESGAGKTSLRNQYLHNRFNNYYKSTIGADFYSKKIQVGSTQVNLMIWDTAGQE 67
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPD--NFPFVVLGNK 126
RF SL AF RGAD C+LV+D + + L +W E F + D D +F +GNK
Sbjct: 68 RFASLSNAFIRGADACLLVFDATKAPNLETLRHWFETFRSNSPVFDNDLNDFCLTAIGNK 127
Query: 127 IDVDGGNS 134
ID NS
Sbjct: 128 IDAIDCNS 135
>gi|407036472|gb|EKE38178.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 190
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 92/149 (61%), Gaps = 8/149 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+LK+I++G+SGVGKTSL+ +YV KF YK TIG DFL K V E++ + LQIWDTAG
Sbjct: 1 MLKLILIGESGVGKTSLIQRYVMNKFEPTYKITIGCDFLAKTVYVENKEYNLQIWDTAGH 60
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E+F S+ +FYRG+D ++V+DV + SF ++ W E+ + + + P ++ GNK+
Sbjct: 61 EKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWISEY---SRALNGKDVPIIICGNKV 117
Query: 128 DVDGGNSRVVCFGEEGSSMVCLQRKYSLL 156
D R+V E + C R YS +
Sbjct: 118 DC---QPRLV--STESARQWCEGRNYSYI 141
>gi|123401208|ref|XP_001301812.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736246|gb|AAX97452.1| small Rab GTPase Rab6b [Trichomonas vaginalis]
gi|121883039|gb|EAX88882.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 191
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 4/124 (3%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
T KV+ LG +GVGKTSL+N+ + +FSNQY TIG DF TK VQ + R TLQIWDTAG
Sbjct: 3 TKCKVVFLGSAGVGKTSLLNRLMTDEFSNQYNTTIGVDFFTKPVQVQGRTVTLQIWDTAG 62
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QERF+SL ++ R + V+VYDV+ KSFD W E + + + V++GNK
Sbjct: 63 QERFKSLMPSYIRDSSVAVIVYDVSDEKSFDEAQEWYETVMHERG----NEAKCVLVGNK 118
Query: 127 IDVD 130
ID++
Sbjct: 119 IDLE 122
>gi|354543852|emb|CCE40574.1| hypothetical protein CPAR2_106090 [Candida parapsilosis]
Length = 246
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 23/147 (15%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRL------------ 56
LKV++LGDSGVGKT L +Q+V+ F+N YKATIG D+LT +Q +
Sbjct: 20 LKVVLLGDSGVGKTCLRSQFVHHIFTNAYKATIGGDYLTTTIQLPPKTDETTPSDETSSM 79
Query: 57 ------FTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQA 110
LQIWDTAGQERF S+ AFYRG D CVL YD+ + +S +L +W ++F+
Sbjct: 80 NEPLERVNLQIWDTAGQERFNSISQAFYRGTDVCVLCYDITNYESVLSLKDWFDQFMQHC 139
Query: 111 SPSDPDNFPFVVLGNKIDVDGGNSRVV 137
S P +++GNK D G RVV
Sbjct: 140 HVSHPG---VIIVGNK--TDRGRDRVV 161
>gi|312434891|gb|ADQ74923.1| hypothetical protein, partial [Jatropha curcas]
Length = 130
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 58/61 (95%)
Query: 77 FYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRV 136
F+RGADCCVLVYDVN KSFDNLNNWREEFLIQA+PSDP+NFPFVVLGNKIDVDG NSRV
Sbjct: 1 FHRGADCCVLVYDVNVGKSFDNLNNWREEFLIQANPSDPENFPFVVLGNKIDVDGANSRV 60
Query: 137 V 137
V
Sbjct: 61 V 61
>gi|195573317|ref|XP_002104640.1| GD21052 [Drosophila simulans]
gi|194200567|gb|EDX14143.1| GD21052 [Drosophila simulans]
Length = 90
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 62/70 (88%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R+++LLKVIILGDS VGKTSLMNQYVNK+FSNQYKATIGADF TKEV DR+ T+Q
Sbjct: 1 MSGRKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQ 60
Query: 61 IWDTAGQERF 70
IWDTAGQERF
Sbjct: 61 IWDTAGQERF 70
>gi|393248157|gb|EJD55664.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 367
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 80/126 (63%), Gaps = 5/126 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV---QFEDRLFTLQIWDTA 65
+K++I+G SG GKTSL QY+ +FS YKATIGADF + + + +LQIWDTA
Sbjct: 4 IKLVIIGSSGTGKTSLRTQYIAGRFSTSYKATIGADFFARTLPHHRIAGEQVSLQIWDTA 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPD--NFPFVVL 123
GQERF SL AF+RGAD +LV+DVN ++ L NW F A D + NF VV+
Sbjct: 64 GQERFSSLSRAFFRGADAVLLVFDVNQPETLQALRNWWSTFRDYAPVPDDEAYNFCTVVV 123
Query: 124 GNKIDV 129
GNK D+
Sbjct: 124 GNKTDL 129
>gi|167388405|ref|XP_001738552.1| rab7 [Entamoeba dispar SAW760]
gi|165898152|gb|EDR25096.1| rab7, putative [Entamoeba dispar SAW760]
Length = 197
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 87/121 (71%), Gaps = 3/121 (2%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+I++GDS VGKTS++N+++N ++S YK+TIG+D KE+ + L++L IWDTAG E
Sbjct: 6 FKIILVGDSFVGKTSIINRFINAEYSTDYKSTIGSDISQKEIIVDGLLYSLSIWDTAGHE 65
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV-VLGNKI 127
++QS+ +FYRG+D C+LVYDV + +SF +L+ W E+ Q SD N V V+GNK+
Sbjct: 66 KYQSVIKSFYRGSDFCLLVYDVTNEESFIHLDKWWNEY--QQEDSDKANEAVVMVIGNKV 123
Query: 128 D 128
D
Sbjct: 124 D 124
>gi|254568970|ref|XP_002491595.1| GTPase [Komagataella pastoris GS115]
gi|238031392|emb|CAY69315.1| GTPase [Komagataella pastoris GS115]
Length = 214
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 80/122 (65%), Gaps = 5/122 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE--DRLFTLQIWDTAG 66
+KV+++GD GVGK+S+ Q K FS YKATIGAD+LT ++ D LQIWDTAG
Sbjct: 6 IKVLLIGDQGVGKSSIRRQLYYKVFSESYKATIGADYLTSKIHVNEYDEEVILQIWDTAG 65
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QERF S+ +YRG D C++VYD+ + SF NLN W ++FL S P +++GNK
Sbjct: 66 QERFNSISQIYYRGTDICIIVYDICNSDSFYNLNIWVQQFLNNCQVSRP---TIMIVGNK 122
Query: 127 ID 128
+D
Sbjct: 123 LD 124
>gi|403417830|emb|CCM04530.1| predicted protein [Fibroporia radiculosa]
Length = 219
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 89/140 (63%), Gaps = 6/140 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP L K++++GDSGVGK+ L+ ++ F++ Y +TIG DF + ++ E ++ LQ
Sbjct: 1 MPDGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKMVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ A+YRGA V+VYDV +SFDN+ W +E AS +N
Sbjct: 61 IWDTAGQERFRTIAAAYYRGAHGIVVVYDVTDAESFDNVKGWLQEIERYAS----ENVKK 116
Query: 121 VVLGNKIDVDGGNSRVVCFG 140
+++GNK D+ +VV +G
Sbjct: 117 LLIGNKSDLV--ERKVVAYG 134
>gi|123506780|ref|XP_001329276.1| Ras family protein [Trichomonas vaginalis G3]
gi|62736244|gb|AAX97451.1| small Rab GTPase Rab6a [Trichomonas vaginalis]
gi|121912229|gb|EAY17053.1| Ras family protein [Trichomonas vaginalis G3]
Length = 202
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 9/134 (6%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K+I +GDS VGKTS++NQY+ + QY +TIG D+L+K V D+ LQIWDTAGQE+
Sbjct: 11 KIIFIGDSSVGKTSIINQYIYNSCTPQYNSTIGIDYLSKIVNEADKPIQLQIWDTAGQEK 70
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F SL A+ R + VLVYD+ +SFDN+ W + + A P+ F+++GNK D+
Sbjct: 71 FHSLIPAYIRSSTIAVLVYDITCKQSFDNIQTWYQMVINNAEPA------FIIVGNKSDL 124
Query: 130 DGGNSRVVCFGEEG 143
D + + EEG
Sbjct: 125 DSERANSI---EEG 135
>gi|156095590|ref|XP_001613830.1| small GTPase Rab1A [Plasmodium vivax Sal-1]
gi|148802704|gb|EDL44103.1| small GTPase Rab1A, putative [Plasmodium vivax]
Length = 200
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 94/147 (63%), Gaps = 7/147 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF K ++ ED++ LQ
Sbjct: 1 MNDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ ++YRGA ++VYDV SF+N+ NW +I+ ++
Sbjct: 61 IWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNW----IIEIEKYASEDVQK 116
Query: 121 VVLGNKIDVDGGNSRVVCFGEEGSSMV 147
V++GNKID+ N R V + EEG +
Sbjct: 117 VLIGNKIDL--KNDRNVSY-EEGKELA 140
>gi|323453211|gb|EGB09083.1| hypothetical protein AURANDRAFT_24921 [Aureococcus anophagefferens]
Length = 214
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 76/115 (66%), Gaps = 3/115 (2%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
TLLK ++LG S VGKTSL+ Q+V+ KF+ + T GADF +K + DR L IWDTAG
Sbjct: 9 TLLKCVVLGSSNVGKTSLLMQFVHGKFTPARRVTTGADFASKVLHLGDREVRLVIWDTAG 68
Query: 67 QERFQ--SLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QERF +LG AFYRGAD +LVYD +++F+ + WR E L+Q P+ FP
Sbjct: 69 QERFHHGTLGGAFYRGADAALLVYDTTDIRTFEQIEMWRRE-LLQRIDGPPEEFP 122
>gi|260942541|ref|XP_002615569.1| hypothetical protein CLUG_04451 [Clavispora lusitaniae ATCC 42720]
gi|238850859|gb|EEQ40323.1| hypothetical protein CLUG_04451 [Clavispora lusitaniae ATCC 42720]
Length = 268
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 90/159 (56%), Gaps = 25/159 (15%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR------------- 55
+KV+ILGDSGVGKT L +Q+V+ F+N YKATIG D+LT ++ ED+
Sbjct: 42 IKVVILGDSGVGKTCLRSQFVHHVFTNAYKATIGGDYLTTTIEIEDKSRPLSSTEGMDGS 101
Query: 56 ------LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQ 109
LQIWDTAGQERF S+ AFYRGAD V VYD+ + +S ++ +W FL
Sbjct: 102 RIAPTTKVNLQIWDTAGQERFNSISKAFYRGADVAVFVYDITNYESLLSIRDWFARFLEH 161
Query: 110 ASPSDPDNFPFVVLGNKIDVDGGNSRVVCFGEEGSSMVC 148
P V++GNK D G+ R + EE ++C
Sbjct: 162 CHVEKPG---VVIVGNK--SDKGSERCIDH-EEVPDILC 194
>gi|221057099|ref|XP_002259687.1| GTPase [Plasmodium knowlesi strain H]
gi|193809759|emb|CAQ40461.1| GTPase, putative [Plasmodium knowlesi strain H]
Length = 200
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 93/141 (65%), Gaps = 7/141 (4%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
+L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF K ++ ED++ LQIWDTAG
Sbjct: 7 SLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAG 66
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QERF+++ ++YRGA ++VYDV SF+N+ NW +I+ ++ +++GNK
Sbjct: 67 QERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNW----IIEIEKYASEDVQKILIGNK 122
Query: 127 IDVDGGNSRVVCFGEEGSSMV 147
ID+ N R V + EEG +
Sbjct: 123 IDL--KNDRNVSY-EEGKELA 140
>gi|426193819|gb|EKV43751.1| hypothetical protein AGABI2DRAFT_180237 [Agaricus bisporus var.
bisporus H97]
Length = 414
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR---LFTLQIWDTA 65
+K++ +G SGVGKTS+ Q+++ FS+ Y+ATIGADF+ K + + TLQIWDTA
Sbjct: 12 IKLVDVGASGVGKTSIRGQFISGGFSSGYRATIGADFIAKTLPHPTKPENTVTLQIWDTA 71
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPD--NFPFVVL 123
GQERF SL AF+RGAD +L++DV+ +S + L W EF + ++ D P ++
Sbjct: 72 GQERFSSLSTAFFRGADAVILMFDVHRPESLEALKKWWAEFCVGVPLAEEDYPEHPCFIV 131
Query: 124 GNKIDVD 130
GNKID++
Sbjct: 132 GNKIDLE 138
>gi|124506171|ref|XP_001351683.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
gi|13375179|emb|CAC34553.1| putative GTPase [Plasmodium falciparum 3D7]
gi|23504611|emb|CAD51490.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
Length = 200
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 94/147 (63%), Gaps = 7/147 (4%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF K ++ ED++ LQ
Sbjct: 1 MNDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ ++YRGA ++VYDV SF+N+ NW +I+ ++
Sbjct: 61 IWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNW----IIEIEKYASEDVQK 116
Query: 121 VVLGNKIDVDGGNSRVVCFGEEGSSMV 147
+++GNKID+ N R V + EEG +
Sbjct: 117 ILIGNKIDL--KNDRNVSY-EEGKELA 140
>gi|388855787|emb|CCF50571.1| related to YPT7-GTP-binding protein of the RAB family [Ustilago
hordei]
Length = 722
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 67/147 (45%), Positives = 88/147 (59%), Gaps = 17/147 (11%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-----EDR 55
+P+ RR + KV+++GD G GKTSL N+++ F Y+ATIGADF+TK + E
Sbjct: 70 IPTPRRAI-KVVLIGDGGTGKTSLRNRFLTNTFYPSYRATIGADFITKSLPLDPLNPEGE 128
Query: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNS-MKSFDNLNNWREEFLIQASP-- 112
TLQIWDTAGQERFQSLG AFYRGAD V+ DV+ ++ + W E F+ Q P
Sbjct: 129 KATLQIWDTAGQERFQSLGSAFYRGADAVVIAIDVSKGLEEVKKVKGWYEAFM-QKGPGP 187
Query: 113 ---SDPDNFPFVVLGNKI----DVDGG 132
D F ++ + NK DVDGG
Sbjct: 188 EEEGDRRRFCWICVANKSDLLEDVDGG 214
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ K++++GDSGVGK+ L+N++V +F + K TIG +FLT+ V + +L QIWDTAGQ
Sbjct: 1 MFKIVMVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 60
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER+Q++ A+YRGA C +L YD+ ++FD++ W +E I N +++GNK
Sbjct: 61 ERYQAITTAYYRGATCALLAYDITKQQTFDHVEKWLDELRIHTDK----NILVMLVGNKS 116
Query: 128 DV 129
D+
Sbjct: 117 DL 118
>gi|198419776|ref|XP_002131191.1| PREDICTED: similar to RAB8B, member RAS oncogene family [Ciona
intestinalis]
Length = 185
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 91/128 (71%), Gaps = 6/128 (4%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++++GDSGVGKTS+M ++ + +FS + ATIG DF + ++ ++++ +QIWDTAGQER
Sbjct: 14 KLVVIGDSGVGKTSVMRRFTDNEFSFNFVATIGIDFKVRTIKVKEKMIKVQIWDTAGQER 73
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F+S+ A+YRGA ++VYD+ S+KSF ++NNW +I + D+ +++GNK D+
Sbjct: 74 FRSITTAYYRGAKGVIIVYDITSLKSFSHVNNW----VINFNRWAGDDVQALLVGNKCDL 129
Query: 130 DGGNSRVV 137
+ + RVV
Sbjct: 130 E--DQRVV 135
>gi|56754975|gb|AAW25670.1| SJCHGC06150 protein [Schistosoma japonicum]
gi|226470410|emb|CAX70485.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485751|emb|CAX75295.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485753|emb|CAX75296.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485755|emb|CAX75297.1| Rab-protein 10 [Schistosoma japonicum]
Length = 205
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 91/144 (63%), Gaps = 7/144 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ +YV+ +S + +TIG DF K ++ E + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCLLIRYVDGSYSPSFISTIGIDFKIKTIELEGKKIKLQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF ++ ++YRGA +++YD+ + ++FDN+ W + AS ++ +V+GNK
Sbjct: 69 ERFHTITTSYYRGAMGIMMIYDITNRRTFDNIQTWMKNICDYAS----EDVEKLVVGNKC 124
Query: 128 DVDGGNSRVVCFGEEGSSMVCLQR 151
D D N R V + EEGS L R
Sbjct: 125 DFD--NRRAVSY-EEGSEKARLHR 145
>gi|440293423|gb|ELP86540.1| hypothetical protein EIN_160940 [Entamoeba invadens IP1]
Length = 186
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 86/125 (68%), Gaps = 4/125 (3%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
+ LK+++LGDS VGKTSL+NQ++N+K+S YKATIG D T+++ E+++ L +WD +
Sbjct: 4 KVTLKIVVLGDSFVGKTSLINQFINRKYSCDYKATIGVDLSTRQISLENQIVNLTVWDPS 63
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
G ERF+ + +F+RG D CVLV + S +S ++L+ W E+ L + + D PFV + N
Sbjct: 64 GSERFRCVSDSFFRGTDGCVLVCSLTSSESLNSLDQWIED-LTRFTGKD---IPFVAVAN 119
Query: 126 KIDVD 130
K DVD
Sbjct: 120 KADVD 124
>gi|190348233|gb|EDK40655.2| hypothetical protein PGUG_04753 [Meyerozyma guilliermondii ATCC
6260]
Length = 228
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 79/125 (63%), Gaps = 8/125 (6%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFT-----LQIWD 63
LKV++LGDSGVGKT + +Q+++ F+N YKATIG D+LT V T LQIWD
Sbjct: 15 LKVVLLGDSGVGKTCMRSQFIHHMFTNAYKATIGGDYLTTSVTINGEGETNTKVNLQIWD 74
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF S+ AFYRG D VLVYD+ + +S +L W + FL P +++
Sbjct: 75 TAGQERFNSISQAFYRGTDVAVLVYDITNYESVLSLRRWFKSFLQHCHVEKP---AILIV 131
Query: 124 GNKID 128
GNK+D
Sbjct: 132 GNKVD 136
>gi|146413655|ref|XP_001482798.1| hypothetical protein PGUG_04753 [Meyerozyma guilliermondii ATCC
6260]
Length = 228
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 79/125 (63%), Gaps = 8/125 (6%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFT-----LQIWD 63
LKV++LGDSGVGKT + +Q+++ F+N YKATIG D+LT V T LQIWD
Sbjct: 15 LKVVLLGDSGVGKTCMRSQFIHHMFTNAYKATIGGDYLTTSVTINGEGETNTKVNLQIWD 74
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF S+ AFYRG D VLVYD+ + +S +L W + FL P +++
Sbjct: 75 TAGQERFNSISQAFYRGTDVAVLVYDITNYESVLSLRRWFKSFLQHCHVEKP---AILIV 131
Query: 124 GNKID 128
GNK+D
Sbjct: 132 GNKVD 136
>gi|226470408|emb|CAX70484.1| Rab-protein 10 [Schistosoma japonicum]
Length = 205
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 91/144 (63%), Gaps = 7/144 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ +YV+ +S + +TIG DF K ++ E + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCLLIRYVDGSYSPSFISTIGIDFKIKTIELEGKKIKLQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF ++ ++YRGA +++YD+ + ++FDN+ W + AS ++ +V+GNK
Sbjct: 69 ERFHTITTSYYRGAMGRMMIYDITNRRTFDNIQTWMKNICDYAS----EDVEKLVVGNKC 124
Query: 128 DVDGGNSRVVCFGEEGSSMVCLQR 151
D D N R V + EEGS L R
Sbjct: 125 DFD--NRRAVSY-EEGSEKARLHR 145
>gi|2689227|emb|CAA72627.1| rab7-like protein [Trichinella pseudospiralis]
Length = 68
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 61/68 (89%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M +R++ LLKVIILGDSGVGKTSLMNQYVNK+FSNQYKATIGADFLTK+ +DR T+Q
Sbjct: 1 MATRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDAVVDDRFVTMQ 60
Query: 61 IWDTAGQE 68
IWDTAGQE
Sbjct: 61 IWDTAGQE 68
>gi|67475440|ref|XP_653414.1| small GTPase Rab7 [Entamoeba histolytica HM-1:IMSS]
gi|50978616|dbj|BAD34975.1| EhRab7H protein [Entamoeba histolytica]
gi|56470391|gb|EAL48057.1| small GTPase Rab7, putative [Entamoeba histolytica HM-1:IMSS]
gi|449707093|gb|EMD46812.1| small GTPase Rab7, putative [Entamoeba histolytica KU27]
Length = 197
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 92/138 (66%), Gaps = 4/138 (2%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+I++GDS VGKTS++N+++N ++S YK+TIG+D KE+ + L++L IWDTAG E
Sbjct: 6 FKIILVGDSFVGKTSIINRFINAEYSTDYKSTIGSDISQKEIIVDGLLYSLSIWDTAGHE 65
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
++QS+ +FYRG+D C+LVYDV + +SF +L+ W E+ Q +V+GNK
Sbjct: 66 KYQSVIKSFYRGSDFCLLVYDVTNEESFMHLDKWWNEYQ-QEDVDKAREAVVMVIGNK-- 122
Query: 129 VDGGNSRVVCFGEEGSSM 146
VD RV+ E+G S+
Sbjct: 123 VDKSQERVIT-EEQGKSL 139
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 83/125 (66%), Gaps = 4/125 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDS VGK++L+N++ +F+ + KATIG DF TK ++ E+++ T Q WDTAGQ
Sbjct: 10 LFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIENKVITAQCWDTAGQ 69
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRGA ++VYD+ S SF N+ W E A DPD +++GNK
Sbjct: 70 ERFRAVTSGYYRGAVGAMIVYDITSKVSFKNVTRWLNELREMA---DPD-ILIMMVGNKS 125
Query: 128 DVDGG 132
D+D
Sbjct: 126 DLDSA 130
>gi|403339683|gb|EJY69107.1| Ras-related protein Rab-7 [Oxytricha trifallax]
Length = 164
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 62/69 (89%)
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
QIWDTAGQER+QSLGVAFYRGA+ CVLVYD+ + +SF+NLN W+++FL++A+P +P+NFP
Sbjct: 7 QIWDTAGQERYQSLGVAFYRGAEACVLVYDITNARSFENLNIWKQDFLVKANPKNPENFP 66
Query: 120 FVVLGNKID 128
F V GNK+D
Sbjct: 67 FFVFGNKLD 75
>gi|195133854|ref|XP_002011354.1| GI16485 [Drosophila mojavensis]
gi|193907329|gb|EDW06196.1| GI16485 [Drosophila mojavensis]
Length = 228
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 80/126 (63%), Gaps = 7/126 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----LFTLQIWD 63
LLK ++LGDSGVGKT L+ QY + +F Q+ +T+G DF K + + R LQIWD
Sbjct: 11 LLKFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLVYSSRGRRHRIHLQIWD 70
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF+SL AFYR A +L++D+ S KSF + NW E+ + A DPD V+
Sbjct: 71 TAGQERFRSLTTAFYRDAMGFLLIFDLTSQKSFLEITNWLEQLRMHAYTEDPD---VVLC 127
Query: 124 GNKIDV 129
GNK D+
Sbjct: 128 GNKCDL 133
>gi|440798204|gb|ELR19272.1| GTPbinding protein [Acanthamoeba castellanii str. Neff]
Length = 184
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 86/121 (71%), Gaps = 5/121 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
+KV+I+GD GVGKT+L+ ++V KF +++ +TIGA F+TK++ + L L++WDTAGQE
Sbjct: 10 VKVVIVGDCGVGKTALVQRFVFNKF-DKHDSTIGAAFVTKDLLADGVLIKLEMWDTAGQE 68
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R++SL ++RGAD C++VYDV S +SF +L W EF A + P VV+GNK+D
Sbjct: 69 RYRSLSPLYFRGADACLMVYDVTSSQSFADLEGWFSEFRSMAGAA----VPMVVVGNKMD 124
Query: 129 V 129
+
Sbjct: 125 L 125
>gi|351694505|gb|EHA97423.1| Ras-related protein Rab-9A [Heterocephalus glaber]
Length = 178
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 73/105 (69%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MN+ KF Q TIG +FL K+++ + T+QIWDTAGQERF+SL FYR +DCC
Sbjct: 1 MNRCGTNKFHAQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRVSDCC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
+L + V+ +SF NL NW++EF+ A +P +FPFV+LGNK+++
Sbjct: 61 LLTFSVDDSQSFQNLRNWKKEFIYYADMKEPKSFPFVILGNKVNI 105
>gi|340373941|ref|XP_003385498.1| PREDICTED: ras-related protein RIC1-like [Amphimedon queenslandica]
Length = 254
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 79/122 (64%), Gaps = 3/122 (2%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
L K++++GDS VGKT L+ +Y F + TIG DF +K V+ ++ + LQ+WDTAG
Sbjct: 31 ALAKLVVIGDSSVGKTCLILRYTQDVFRESFLPTIGVDFKSKIVEEGEKRYKLQLWDTAG 90
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QER+ SL FYRGA ++VYD+ S++SFDN+ W E+ A P+ P +VLGNK
Sbjct: 91 QERYDSLRRGFYRGAKGVIVVYDITSIESFDNVTKWIEDITTNAGPTQP---LLLVLGNK 147
Query: 127 ID 128
ID
Sbjct: 148 ID 149
>gi|403279869|ref|XP_003931465.1| PREDICTED: ras-related protein Rab-9A-like [Saimiri boliviensis
boliviensis]
Length = 175
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 78/125 (62%), Gaps = 26/125 (20%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
+ +LLKVI+LGD GVGK+SLMN+YV KF NQ+ TIG +FL K+++ + T+QIWDT
Sbjct: 4 KPSLLKVILLGDGGVGKSSLMNRYVTNKFDNQFFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQERF SL +AFYRG + A +P++FPFV+LG
Sbjct: 64 AGQERFWSLRMAFYRG--------------------------IYSADVKEPESFPFVILG 97
Query: 125 NKIDV 129
NKID+
Sbjct: 98 NKIDI 102
>gi|195399430|ref|XP_002058323.1| GJ16030 [Drosophila virilis]
gi|194150747|gb|EDW66431.1| GJ16030 [Drosophila virilis]
Length = 226
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 80/126 (63%), Gaps = 7/126 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----LFTLQIWD 63
LLK ++LGDSGVGKT L+ QY + +F Q+ +T+G DF K + + R LQIWD
Sbjct: 11 LLKFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLVYSSRGRRHRIHLQIWD 70
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF+SL AFYR A +L++D+ S KSF + NW E+ + A DPD V+
Sbjct: 71 TAGQERFRSLTTAFYRDAMGFLLIFDLTSQKSFLEVTNWLEQLRMHAYTEDPD---VVLC 127
Query: 124 GNKIDV 129
GNK D+
Sbjct: 128 GNKCDL 133
>gi|427784137|gb|JAA57520.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 191
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
T +KV +LGDSGVGK+S++ ++V F++ ++TIGA F+ K + DR F IWDTAG
Sbjct: 5 TEVKVCLLGDSGVGKSSILQRFVYNTFNSSAESTIGASFMMKNLVLHDRTFKFNIWDTAG 64
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QER+++L +YRGA V+VYD+ SM+SF+ + +W E + P N + GNK
Sbjct: 65 QERYRALAPMYYRGAGAAVIVYDITSMESFNAVQSWVRELQLHGDP----NIVLGIAGNK 120
Query: 127 IDVDGGNSRVVCFGE 141
D++ + GE
Sbjct: 121 CDLEDHREVSLATGE 135
>gi|219879825|gb|ABW35313.2| Rab1A [Guillardia theta]
gi|428167960|gb|EKX36911.1| hypothetical protein GUITHDRAFT_97443 [Guillardia theta CCMP2712]
Length = 530
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 87/123 (70%), Gaps = 3/123 (2%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLK++++GDS VGKTSL+ ++ + FSN + +TIG DF + + +D+ LQIWDTAGQ
Sbjct: 312 LLKIVLVGDSDVGKTSLLTRFSDDNFSNSFISTIGVDFRWRTMSIKDKNIKLQIWDTAGQ 371
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGAD V+VYD+ + +SFD+++ W +E +D ++ +V+GNK
Sbjct: 372 ERFRTITSAYYRGADGIVVVYDITNKESFDHVDMWMKEI---HKFTDDNHVRVLVVGNKC 428
Query: 128 DVD 130
D++
Sbjct: 429 DME 431
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 85/122 (69%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT+L +++ N +F+ + K+TIG DF TK V+ + ++ QIWDTAGQ
Sbjct: 11 LFKIVLIGDSGVGKTNLRSRFTNDEFNLESKSTIGVDFATKNVKIDGKVVKAQIWDTAGQ 70
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD++ +F NLN W EE AS D+ +++GNK
Sbjct: 71 ERYRAITSAYYRGAVGAILVYDISKPHTFLNLNKWLEELKEYAS----DDVIIMLIGNKC 126
Query: 128 DV 129
D+
Sbjct: 127 DL 128
>gi|403345307|gb|EJY72016.1| Rab GTPase 2b [Oxytricha trifallax]
gi|403361525|gb|EJY80461.1| Rab GTPase 2b [Oxytricha trifallax]
Length = 221
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 82/124 (66%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K+II+GDS VGK+ L+++ +F ++ T+G +F T V+ E ++F LQIWDTAGQ
Sbjct: 17 LFKLIIIGDSAVGKSCLLHRLTTNEFMEDHEVTVGVEFGTLLVKLESQVFKLQIWDTAGQ 76
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E F+S+ FYRGA C YD+ +SF++LN+W EE L Q S+PD F++ GNK
Sbjct: 77 ESFKSITKIFYRGAHCIFFSYDITRQESFNSLNHWYEEVLAQ---SEPDIIMFLI-GNKK 132
Query: 128 DVDG 131
D++
Sbjct: 133 DLES 136
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 85/136 (62%), Gaps = 11/136 (8%)
Query: 1 MPSRRRT-------LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE 53
M SRRR L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ +Q E
Sbjct: 1 MSSRRRVGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVE 60
Query: 54 DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS 113
R QIWDTAGQER++++ A+YRGA +LVYDV +FDN+ W +E A
Sbjct: 61 GRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADA- 119
Query: 114 DPDNFPFVVLGNKIDV 129
N +++GNK D+
Sbjct: 120 ---NIVIMLIGNKTDL 132
>gi|396081134|gb|AFN82753.1| Rab GTPase [Encephalitozoon romaleae SJ-2008]
Length = 201
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S + L K+I++G+SGVGKT LM +Y ++ +S +TIG DF K ++ E LQ
Sbjct: 1 MDSECKYLFKMILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEVEGEKVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ +YRGA ++V+D+ S +SFDNL +W L + + +N
Sbjct: 61 IWDTAGQERFRAIISNYYRGAHGIIMVFDMGSKESFDNLGDW----LAEVRKNTNENVEI 116
Query: 121 VVLGNKID 128
++LGNK+D
Sbjct: 117 IILGNKVD 124
>gi|59897141|gb|AAX11937.1| Rab GTPase [Entamoeba histolytica]
Length = 192
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 81/121 (66%), Gaps = 5/121 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LKV+++GDSGVGKT+L+ QY ++KFS +TIG D+ TK V F D+ TLQ+WDTAGQE
Sbjct: 7 LKVLLIGDSGVGKTALLRQYCDQKFSEDVSSTIGVDYRTKRVNFGDKTITLQLWDTAGQE 66
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ ++YRG+ ++VYDV++ S + W E + D F+V GNKID
Sbjct: 67 RFRNITTSYYRGSQGILIVYDVSNFDSLKQVTYWIGEL----KKENVDGIIFLV-GNKID 121
Query: 129 V 129
V
Sbjct: 122 V 122
>gi|47223036|emb|CAG07123.1| unnamed protein product [Tetraodon nigroviridis]
Length = 244
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 83/137 (60%), Gaps = 12/137 (8%)
Query: 3 SRRRTL--------LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED 54
SRRR + L++II+G GVGKTSLM ++ + F K+T+G DF K V+
Sbjct: 29 SRRRKMPPRPADFKLQIIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG 88
Query: 55 RLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSD 114
+ LQIWDTAGQERF S+ A+YRGA VLVYD+ ++SFD+L W + AS
Sbjct: 89 KKIRLQIWDTAGQERFNSITSAYYRGAKGIVLVYDITKLESFDDLPKWMKMIDKYAS--- 145
Query: 115 PDNFPFVVLGNKIDVDG 131
+ +++GNK+D +G
Sbjct: 146 -EEAELLLVGNKLDCEG 161
>gi|393218694|gb|EJD04182.1| GTP-binding protein ypt5 [Fomitiporia mediterranea MF3/22]
Length = 252
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 82/128 (64%), Gaps = 4/128 (3%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
PS + +K+++LG++ VGK+S++ ++V+ +F + TIGA FLT++ + EDR+ +I
Sbjct: 8 PSDKSVQVKLVLLGEAAVGKSSIVLRFVSNEFQPNKEPTIGAAFLTQKCRLEDRVLRYEI 67
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF SL +YR A V+VYD+ M S + +W +E QA+P N
Sbjct: 68 WDTAGQERFHSLAPMYYRNAQAAVVVYDITKMASLEKAKSWVKELQRQANP----NIVIA 123
Query: 122 VLGNKIDV 129
+ GNK+D+
Sbjct: 124 LAGNKLDL 131
>gi|167079098|ref|XP_001740498.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165895372|gb|EDR23078.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 192
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 81/121 (66%), Gaps = 5/121 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LKV+++GDSGVGKT+L+ QY ++KFS +TIG D+ TK V F D+ TLQ+WDTAGQE
Sbjct: 7 LKVLLIGDSGVGKTALLRQYCDQKFSEDVSSTIGVDYRTKRVNFGDKTITLQLWDTAGQE 66
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ ++YRG+ ++VYDV++ S + W E + D F+V GNKID
Sbjct: 67 RFRNITTSYYRGSQGILIVYDVSNFDSLKQVTYWIGEL----KKENVDGMIFLV-GNKID 121
Query: 129 V 129
V
Sbjct: 122 V 122
>gi|332023503|gb|EGI63741.1| Ras-related protein Rab-9A [Acromyrmex echinatior]
Length = 188
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 71/112 (63%)
Query: 25 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCC 84
MN++V+ F TIG +FL K+++ +TLQIWDTAGQERF++L FYRG+D C
Sbjct: 1 MNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQIWDTAGQERFKTLRTPFYRGSDIC 60
Query: 85 VLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRV 136
+L Y V+ SF NL WR EFL A + FPF+V+GNK+DV +V
Sbjct: 61 LLTYAVDDKTSFRNLALWRSEFLKYADVQEGSTFPFIVVGNKVDVPESEKQV 112
>gi|169844272|ref|XP_001828857.1| GTP-binding protein ypt5 [Coprinopsis cinerea okayama7#130]
gi|116509969|gb|EAU92864.1| GTP-binding protein ypt5 [Coprinopsis cinerea okayama7#130]
Length = 257
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 81/128 (63%), Gaps = 4/128 (3%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P+ + +K+++LG++ VGK+S++ ++VN +F + TIGA FLT++ + EDR+ +I
Sbjct: 7 PADKSVQVKLVLLGEAAVGKSSVVLRFVNNEFQPNKEPTIGAAFLTQKCRLEDRILRYEI 66
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF SL +YR A V+VYDV S + +W +E QA+P N
Sbjct: 67 WDTAGQERFHSLAPMYYRNAQAAVVVYDVTKASSLEKAKSWVKELQRQANP----NIVIA 122
Query: 122 VLGNKIDV 129
+ GNK+D+
Sbjct: 123 LAGNKVDL 130
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ K+++ GDSGVGK+ L+N++V +F + K TIG +FLT+ V + +L QIWDTAGQ
Sbjct: 15 MFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER+Q++ A+YRGA +L YD+ ++FD++ W +E I A N +++GNK
Sbjct: 75 ERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADK----NILVMLVGNKS 130
Query: 128 DV 129
D+
Sbjct: 131 DL 132
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 84/136 (61%), Gaps = 6/136 (4%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P R + KV+++GDS VGK+ L+ ++ +FS KATIG +F T+ +Q + R QI
Sbjct: 12 PKRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQI 71
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQER++++ A+YRGA +LVYD+ +SFD++ W EE A N +
Sbjct: 72 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHAD----KNLVIM 127
Query: 122 VLGNKIDVDGGNSRVV 137
++GNK D+ G RVV
Sbjct: 128 LIGNKSDL--GTLRVV 141
>gi|124088024|ref|XP_001346935.1| Ras-related RAB [Paramecium tetraurelia strain d4-2]
gi|145474741|ref|XP_001423393.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057324|emb|CAH03308.1| Ras-related RAB, putative [Paramecium tetraurelia]
gi|74831386|emb|CAI39294.1| rab_C65 [Paramecium tetraurelia]
gi|124390453|emb|CAK55995.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 90/143 (62%), Gaps = 8/143 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLKVI++GDSGVGKT+L+ ++VN FSN K+TIG F TK + ++ LQ+WDTAGQ
Sbjct: 8 LLKVIVIGDSGVGKTNLLLRFVNHTFSNDLKSTIGVQFFTKVISIKNEHIKLQLWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++S+ ++Y+G+ ++ +D+ +S DN+ W EE QA N +++GNK+
Sbjct: 68 ERYRSISNSYYKGSHGVIICFDLTHQESLDNVVKWYEEVKQQADF----NVKIILIGNKL 123
Query: 128 DVDGGNSRVVCFGEEGSSMVCLQ 150
D+ RVV G + + V Q
Sbjct: 124 DL--SQQRVV--GSDTAQQVAKQ 142
>gi|401825835|ref|XP_003887012.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
gi|392998169|gb|AFM98031.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
Length = 202
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S + L K+I++G+SGVGKT LM +Y ++ +S +TIG DF K ++ E LQ
Sbjct: 1 MDSECKYLFKIILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEAEGEKVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ +YRGA ++V+D+ S +SFDNL +W L + + +N
Sbjct: 61 IWDTAGQERFRAIISNYYRGAHGIIIVFDMGSKESFDNLGDW----LGEVRKNTNENVEM 116
Query: 121 VVLGNKID 128
++LGNK+D
Sbjct: 117 IILGNKVD 124
>gi|145488553|ref|XP_001430280.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831244|emb|CAI39269.1| rab_C89 [Paramecium tetraurelia]
gi|124397377|emb|CAK62882.1| unnamed protein product [Paramecium tetraurelia]
Length = 315
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 81/128 (63%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S ++ ++ ++I+GD G GKT+L Q +F+ +Y +TIG D KE+ E + LQ
Sbjct: 1 MQSLQKKVVNIVIIGDQGAGKTTLFKQVTTGQFTPEYYSTIGVDVGIKEISIEGFQYHLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
WDT+GQERFQ++ ++YR A+CCV+VYD+ + + N+ +W ++F + FPF
Sbjct: 61 FWDTSGQERFQAIIQSYYRRAECCVIVYDLIDPEDYKNVKHWMKQFSFRCDLDPEQKFPF 120
Query: 121 VVLGNKID 128
V++G +D
Sbjct: 121 VIVGTHLD 128
>gi|156406695|ref|XP_001641180.1| predicted protein [Nematostella vectensis]
gi|156228318|gb|EDO49117.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 79/122 (64%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK++L+++Y +F KATIG + + V+ E + QIWDTAGQ
Sbjct: 18 LFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTAGQ 77
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA VLVYD+ SF NLN W EE AS D+ +++GNK
Sbjct: 78 ERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHAS----DDLSIILIGNKS 133
Query: 128 DV 129
D+
Sbjct: 134 DL 135
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ K+++ GDSGVGK+ L+N++V +F + K TIG +FLT+ V + +L QIWDTAGQ
Sbjct: 15 MFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVMDHKLVKAQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER+Q++ A+YRGA +L YD+ ++FD++ W +E I A N +++GNK
Sbjct: 75 ERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADK----NILVMLVGNKS 130
Query: 128 DV 129
D+
Sbjct: 131 DL 132
>gi|17506899|ref|NP_492481.1| Protein RAB-5 [Caenorhabditis elegans]
gi|3876435|emb|CAB04205.1| Protein RAB-5 [Caenorhabditis elegans]
Length = 208
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 82/137 (59%), Gaps = 6/137 (4%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDT
Sbjct: 16 RTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDT 75
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQER+ SL +YRGA ++VYD+ + +SF NW +E QASP N + G
Sbjct: 76 AGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASP----NIVMALAG 131
Query: 125 NKIDVDGGNSRVVCFGE 141
NK DV N R V + E
Sbjct: 132 NKADV--ANKRTVEYEE 146
>gi|195456678|ref|XP_002075239.1| GK16937 [Drosophila willistoni]
gi|194171324|gb|EDW86225.1| GK16937 [Drosophila willistoni]
Length = 230
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 80/126 (63%), Gaps = 7/126 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----LFTLQIWD 63
LLK ++LGDSGVGKT L+ QY + +F +Q+ +T+G DF K + + R LQIWD
Sbjct: 11 LLKFLVLGDSGVGKTCLLYQYTDGRFHSQFISTVGIDFREKRLVYNSRGRRHRIHLQIWD 70
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF+SL AFYR A +L++D+ S KSF + NW E+ + A PD V+
Sbjct: 71 TAGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLEITNWLEQLRMHAYSEQPD---VVLC 127
Query: 124 GNKIDV 129
GNK D+
Sbjct: 128 GNKCDL 133
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 83/122 (68%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GD+GVGK++L++++ +FS + K+TIGA+F T+ +Q E ++ QIWDTAGQ
Sbjct: 11 LFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGAEFATRSIQCEGKIIKAQIWDTAGQ 70
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ SFDN+ W +E A N +++GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADA----NIVIMLVGNKS 126
Query: 128 DV 129
D+
Sbjct: 127 DL 128
>gi|308485680|ref|XP_003105038.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|308256983|gb|EFP00936.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|341880645|gb|EGT36580.1| CBN-RAB-5 protein [Caenorhabditis brenneri]
gi|341900137|gb|EGT56072.1| hypothetical protein CAEBREN_25822 [Caenorhabditis brenneri]
Length = 209
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 82/137 (59%), Gaps = 6/137 (4%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDT
Sbjct: 17 RTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDT 76
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQER+ SL +YRGA ++VYD+ + +SF NW +E QASP N + G
Sbjct: 77 AGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASP----NIVMALAG 132
Query: 125 NKIDVDGGNSRVVCFGE 141
NK DV N R V + E
Sbjct: 133 NKADV--ANKRTVEYEE 147
>gi|67474490|ref|XP_652994.1| Rab B GTPase [Entamoeba histolytica HM-1:IMSS]
gi|7144601|gb|AAF37308.1| RabB [Entamoeba histolytica]
gi|56469903|gb|EAL47606.1| Rab B GTPase [Entamoeba histolytica HM-1:IMSS]
gi|407035689|gb|EKE37808.1| Rab B GTPase [Entamoeba nuttalli P19]
gi|449706101|gb|EMD46018.1| RabB GTPase, putative [Entamoeba histolytica KU27]
Length = 192
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 81/121 (66%), Gaps = 5/121 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LK++++GDSGVGKT+L+ QY ++KFS +TIG D+ TK V F D+ TLQ+WDTAGQE
Sbjct: 7 LKILLIGDSGVGKTALLRQYCDQKFSEDVSSTIGVDYRTKRVTFGDKTITLQLWDTAGQE 66
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ ++YRG+ ++VYDV++ S + W E + D F+V GNKID
Sbjct: 67 RFRNITTSYYRGSQGILIVYDVSNFDSLKQVTYWIGEL----KKENVDGIIFLV-GNKID 121
Query: 129 V 129
V
Sbjct: 122 V 122
>gi|58493576|gb|AAW78556.1| RabB [Entamoeba dispar]
Length = 192
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 81/121 (66%), Gaps = 5/121 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LKV+++GDSGVGKT+L+ QY ++KFS +TIG D+ TK V F D+ TLQ+WDTAGQE
Sbjct: 7 LKVLLIGDSGVGKTALLRQYCDQKFSEDVSSTIGVDYRTKRVNFGDKTITLQLWDTAGQE 66
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ ++YRG+ ++VYDV++ S + W E + D F+V GNKID
Sbjct: 67 RFRNITTSYYRGSQGILIVYDVSNFDSLKQVTYWIGEL----KRENVDGMIFLV-GNKID 121
Query: 129 V 129
V
Sbjct: 122 V 122
>gi|399163143|gb|AFP33147.1| rab-5, partial [Caenorhabditis elegans]
Length = 207
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 82/137 (59%), Gaps = 6/137 (4%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDT 64
R K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDT
Sbjct: 15 RTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDT 74
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 124
AGQER+ SL +YRGA ++VYD+ + +SF NW +E QASP N + G
Sbjct: 75 AGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASP----NIVMALAG 130
Query: 125 NKIDVDGGNSRVVCFGE 141
NK DV N R V + E
Sbjct: 131 NKADV--ANKRTVEYEE 145
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 83/124 (66%), Gaps = 8/124 (6%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + ++TIG +F TK VQ +D+L QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL--GN 125
ER++++ A+YRGA ++VYDV+ +FDN W E P D + VV+ GN
Sbjct: 74 ERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLRE------PRDHTDANIVVMLVGN 127
Query: 126 KIDV 129
K D+
Sbjct: 128 KADL 131
>gi|195162179|ref|XP_002021933.1| GL14374 [Drosophila persimilis]
gi|198470911|ref|XP_001355432.2| GA13248 [Drosophila pseudoobscura pseudoobscura]
gi|194103831|gb|EDW25874.1| GL14374 [Drosophila persimilis]
gi|198145678|gb|EAL32490.2| GA13248 [Drosophila pseudoobscura pseudoobscura]
Length = 230
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 80/126 (63%), Gaps = 7/126 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----LFTLQIWD 63
LLK ++LGDSGVGKT L+ QY + +F+ Q+ +T+G DF K + + R LQIWD
Sbjct: 11 LLKFLVLGDSGVGKTCLLYQYTDGRFNTQFISTVGIDFREKRLVYNSRGRRHRIHLQIWD 70
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF+SL AFYR A +L++D+ S KSF NW E+ + A DPD V+
Sbjct: 71 TAGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETVNWLEQLRMHAYSEDPD---VVLC 127
Query: 124 GNKIDV 129
GNK D+
Sbjct: 128 GNKCDL 133
>gi|403350220|gb|EJY74560.1| Rab GTPase 2c [Oxytricha trifallax]
Length = 244
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 81/123 (65%), Gaps = 4/123 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K+II+G+SGVGK+ LM++ +FS ++ T+G +F + V+ E+ +F LQIWDTAGQ
Sbjct: 43 LFKLIIIGNSGVGKSCLMHRVTTNEFSEDHEVTVGVEFGSLLVKMEETVFKLQIWDTAGQ 102
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E FQS+ FYRGA +L Y V SM SF NL +W E Q S+PD +++GN++
Sbjct: 103 ESFQSITKIFYRGAHAVLLTYSVASMTSFLNLEHWFNEIKTQ---SEPDAI-IILVGNQM 158
Query: 128 DVD 130
D D
Sbjct: 159 DRD 161
>gi|312379028|gb|EFR25435.1| hypothetical protein AND_09212 [Anopheles darlingi]
Length = 278
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 16 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGV 75
D VGK+ LMN++V+ F TIG +FL K++Q + +TLQIWDTAGQERF++L
Sbjct: 62 DGNVGKSCLMNRFVSNFFDANSFHTIGVEFLNKDLQVDQERYTLQIWDTAGQERFRALRT 121
Query: 76 AFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSR 135
FYRG D C+L Y ++ +SF L +WR+EFL + +P+ FPF+V+G K D+ +
Sbjct: 122 PFYRGTDICLLTYAIDDRQSFRALVSWRDEFL-RYYDVNPERFPFIVVGTKNDLPAAQRQ 180
Query: 136 VV 137
V
Sbjct: 181 VT 182
>gi|346473575|gb|AEO36632.1| hypothetical protein [Amblyomma maculatum]
Length = 194
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
T +KV +LGDSGVGK+S++ ++V F++ ++TIGA F+ K + DR F IWDTAG
Sbjct: 8 TEVKVCLLGDSGVGKSSILQRFVYNTFNSSAESTIGASFMMKNLVLHDRTFKFNIWDTAG 67
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QER+++L +YRGA V+VYD+ SM SF+ + +W E + N + GNK
Sbjct: 68 QERYRALAPMYYRGAAAAVIVYDITSMDSFNAVQSWVRELQLHG----EQNIALGIAGNK 123
Query: 127 IDVDGGNSRVVCFGE 141
D++ + GE
Sbjct: 124 CDLEDHREVSLATGE 138
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 11/148 (7%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK++L++++ +F+ + K+TIG +F TK + E ++ QIWDTAGQ
Sbjct: 11 LYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIITEGKVIKAQIWDTAGQ 70
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD++ SF+N+ W +E A P N +++GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADP----NIVVLLVGNKS 126
Query: 128 DVDGGNSRVV-----CFGEEGSSMVCLQ 150
D+ N R V C E M C++
Sbjct: 127 DLR--NLRTVTQEEACAFSEREGMACME 152
>gi|119617271|gb|EAW96865.1| hCG24991, isoform CRA_a [Homo sapiens]
gi|119617272|gb|EAW96866.1| hCG24991, isoform CRA_a [Homo sapiens]
Length = 203
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +L YD+ KSF+N+ NW + + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAG----VEHLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|320584175|gb|EFW98386.1| putative GTPase [Ogataea parapolymorpha DL-1]
Length = 205
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 83/122 (68%), Gaps = 6/122 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE--DRLFTLQIWDTAG 66
LKV++LGD GVGKTS+ Q+V + F++ Y+ATIGA+FL+ V+ D+L LQIWDTAG
Sbjct: 6 LKVVLLGDQGVGKTSIRAQFVQRYFASSYRATIGANFLSHAVKTRAGDQL-QLQIWDTAG 64
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QERF ++ AFYRGA+ +LVYDV + +SF +L W ++ L + +++GNK
Sbjct: 65 QERFNAMTRAFYRGAEIAILVYDVTNAQSFYSLRRWLDKIL---EHCNNPRLRILIVGNK 121
Query: 127 ID 128
D
Sbjct: 122 TD 123
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ KV+++GDSGVGK+ L+N++V +F + KATIG +FLTK V + +L QIWDTAGQ
Sbjct: 16 MFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLMDHKLVKAQIWDTAGQ 75
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER+Q++ A+YRGA +L YD+ +F+++ W +E A N +++GNK
Sbjct: 76 ERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADK----NIVVMLVGNKS 131
Query: 128 DV 129
D+
Sbjct: 132 DL 133
>gi|348508689|ref|XP_003441886.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 222
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 24 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 83
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +FD NW +E QASP N + GNK D
Sbjct: 84 RYHSLAPMYYRGAQAAIVVYDITNTDTFDRAKNWVKELQRQASP----NIVIALAGNKAD 139
Query: 129 VDGGNSRVVCFGE 141
+ N R V F E
Sbjct: 140 I--ANKRAVEFQE 150
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK++L++++ +F+ + K+TIG +F TK + + ++ QIWDTAGQ
Sbjct: 11 LYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIMTQGKVIKAQIWDTAGQ 70
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD++ SF+N+ W +E A P N +++GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADP----NIVVLLVGNKS 126
Query: 128 DVD---GGNSRVVCFGEEGSSMVCLQ 150
D+ C E M C++
Sbjct: 127 DLKHLRAVTQEEACMFSEKEGMACME 152
>gi|354478940|ref|XP_003501672.1| PREDICTED: ras-related protein Rab-13-like [Cricetulus griseus]
gi|81909832|sp|Q5KTJ6.1|RAB13_MESAU RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|57157445|dbj|BAD83700.1| Rab13 [Mesocricetus auratus]
Length = 203
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 80/124 (64%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V+ E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|145369214|emb|CAM90412.1| putative GTPase [Saccharomyces cerevisiae]
Length = 205
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 83/122 (68%), Gaps = 6/122 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE--DRLFTLQIWDTAG 66
LKV++LGD GVGKTS+ Q+V + F++ Y+ATIGA+FL+ V+ D+L LQIWDTAG
Sbjct: 6 LKVVLLGDQGVGKTSIRAQFVQRYFASSYRATIGANFLSHAVKTRAGDQL-QLQIWDTAG 64
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QERF ++ AFYRGA+ +LVYDV + +SF +L W ++ L + +++GNK
Sbjct: 65 QERFDAMTRAFYRGAEIAILVYDVTNAQSFYSLRRWLDKIL---EHCNNPRLRILIVGNK 121
Query: 127 ID 128
D
Sbjct: 122 TD 123
>gi|429965619|gb|ELA47616.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 199
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 81/121 (66%), Gaps = 4/121 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K I++G+SGVGKTS++N+YV++ ++ Y +TIG DF K + + LQIWDTAGQ
Sbjct: 7 LFKTILIGNSGVGKTSIINRYVDETYTKNYISTIGVDFKIKTIVRHGKTVKLQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA C ++V+DV +SF ++ +W + + ++ V+LGNKI
Sbjct: 67 ERFRTITSSYYRGAHCIIVVFDVTEEESFSDVASW----IAEVEKHKVNDTLIVLLGNKI 122
Query: 128 D 128
D
Sbjct: 123 D 123
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + ++TIG +F TK VQ +D+L QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA ++VYDV+ +FDN W E N +++GNK
Sbjct: 74 ERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLRELRDHTDA----NIVVMLVGNKA 129
Query: 128 DV 129
D+
Sbjct: 130 DL 131
>gi|440494406|gb|ELQ76787.1| GTPase Rab1/YPT1, small G protein superfamily [Trachipleistophora
hominis]
Length = 198
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 81/121 (66%), Gaps = 4/121 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K I++G+SGVGKTS++N+YV++ ++ Y +TIG DF K + + LQIWDTAGQ
Sbjct: 7 LFKTILIGNSGVGKTSIINRYVDETYTENYISTIGVDFKIKTLTRHGKTVKLQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA C ++V+DV +SF ++ +W + + ++ V+LGNKI
Sbjct: 67 ERFRTITSSYYRGAHCIIVVFDVTEEESFSDVASW----IAEVEKHKVNDTLIVLLGNKI 122
Query: 128 D 128
D
Sbjct: 123 D 123
>gi|195045379|ref|XP_001991965.1| GH24468 [Drosophila grimshawi]
gi|193892806|gb|EDV91672.1| GH24468 [Drosophila grimshawi]
Length = 234
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 80/126 (63%), Gaps = 7/126 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----LFTLQIWD 63
L K ++LGDSGVGKT L+ QY + +F +Q+ +T+G DF K + + R LQIWD
Sbjct: 11 LFKFLVLGDSGVGKTCLLYQYTDGRFHSQFISTVGIDFREKRLVYRSRGRRHRIHLQIWD 70
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF+SL AFYR A +L++D+ S KSF ++NW E+ A +PD V+
Sbjct: 71 TAGQERFRSLTTAFYRDAMGFLLIFDLTSQKSFLEISNWLEQLRTHAYTEEPD---VVLC 127
Query: 124 GNKIDV 129
GNK D+
Sbjct: 128 GNKSDL 133
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK++L++++ FS K+TIG +F T+ +Q E ++ QIWDTAGQ
Sbjct: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E A N +++GNKI
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADS----NIVVMLIGNKI 133
Query: 128 DV 129
D+
Sbjct: 134 DL 135
>gi|215422530|dbj|BAG85378.1| Rab5-GTP binding protein [Periplaneta americana]
Length = 213
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 83/135 (61%), Gaps = 10/135 (7%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ ++ ED +IWDTAGQE
Sbjct: 26 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQPLRVEDTAVKFEIWDTAGQE 85
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV--LGNK 126
R+ SL +YRGA ++VYD+ + +F NW +E QASP P V+ GNK
Sbjct: 86 RYHSLAPMYYRGAQAAIVVYDIPNQDTFGRAKNWVKELHKQASP------PIVIALAGNK 139
Query: 127 IDVDGGNSRVVCFGE 141
D+ N RVV F E
Sbjct: 140 ADL--ANKRVVEFEE 152
>gi|302815420|ref|XP_002989391.1| rab family GTPase [Selaginella moellendorffii]
gi|300142785|gb|EFJ09482.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
KV++LGD VGKTSL+ +YVN +FS+ ATI A +LTK + + + TL IWDTAGQE
Sbjct: 11 FKVVLLGDGEVGKTSLVLRYVNNQFSDSQSATIQASYLTKRLSVDGAVATLSIWDTAGQE 70
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF +LG +YR AD +LVYD+ SF + NW +E AS N + GNK D
Sbjct: 71 RFHALGPIYYRDADGALLVYDIMDRDSFTRVKNWVKELRKMASNK---NIVLTIAGNKSD 127
Query: 129 VD 130
+D
Sbjct: 128 MD 129
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 87/137 (63%), Gaps = 6/137 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDS VGK++L+N++ +F+ + KATIG DF TK ++ E ++ T Q WDTAGQ
Sbjct: 9 LFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEGKVITAQCWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +YRGA ++VYD+ S SF N+ W E A P + +++GNK
Sbjct: 69 ERFRAVTSGYYRGALGAMIVYDITSKISFKNVTRWLNELREMAEP----DILVMMVGNKS 124
Query: 128 DVDGGNSRVVCFGEEGS 144
D++ +SR V E S
Sbjct: 125 DLE--SSREVSTREAQS 139
>gi|303388805|ref|XP_003072636.1| Rab GTPase [Encephalitozoon intestinalis ATCC 50506]
gi|303301777|gb|ADM11276.1| Rab GTPase [Encephalitozoon intestinalis ATCC 50506]
Length = 201
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S + L K+I++G+SGVGKT LM +Y ++ +S +TIG DF K ++ E LQ
Sbjct: 1 MDSECKYLFKIILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEVEGERVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ +YRGA ++V+D+ S +SF+NL +W L + + +N
Sbjct: 61 IWDTAGQERFRAIISNYYRGAHGIIIVFDMGSKESFNNLGDW----LSEVRKNTNENVEI 116
Query: 121 VVLGNKID 128
++LGNK+D
Sbjct: 117 IILGNKVD 124
>gi|19173100|ref|NP_597651.1| similarity to RAS-LIKE GTP-BINDING PROTEIN YPT1 [Encephalitozoon
cuniculi GB-M1]
gi|19168767|emb|CAD26286.1| similarity to RAS-LIKE GTP-BINDING PROTEIN YPT1 [Encephalitozoon
cuniculi GB-M1]
Length = 201
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 82/128 (64%), Gaps = 4/128 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S + L K+I++G+SGVGKT LM +Y ++ +S +TIG DF K ++ LQ
Sbjct: 1 MDSECKYLFKMILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEVAGEKVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ +YRGA ++V+D+ S +SFDNL +W L + + +N
Sbjct: 61 IWDTAGQERFRAIISNYYRGAHGIIIVFDMGSKESFDNLGDW----LSEVRKNTSENVEI 116
Query: 121 VVLGNKID 128
++LGNK+D
Sbjct: 117 IILGNKVD 124
>gi|399217674|emb|CCF74561.1| unnamed protein product [Babesia microti strain RI]
Length = 272
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 85/124 (68%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++I+GDSGVGK+SL+ ++ + F++ + +TIG DF K V + + LQIWDTAGQ
Sbjct: 79 LFKILIIGDSGVGKSSLLLRFSDDTFNDSFLSTIGVDFKIKTVNIDKKSVKLQIWDTAGQ 138
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++Y+GA ++VYDV + +SFDN+ W ++ A+PS +++GNKI
Sbjct: 139 ERFRTITSSYYKGAQGIIVVYDVTNKESFDNVKKWLDDIEKYAAPSVTK----MLVGNKI 194
Query: 128 DVDG 131
DV+
Sbjct: 195 DVEA 198
>gi|302758026|ref|XP_002962436.1| rab family GTPase [Selaginella moellendorffii]
gi|300169297|gb|EFJ35899.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
KV++LGD VGKTSL+ +YVN +FS+ ATI A +LTK + + + TL IWDTAGQE
Sbjct: 11 FKVVLLGDGRVGKTSLVLRYVNNQFSDSQSATIQASYLTKRLSVDGAVATLSIWDTAGQE 70
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF +LG +YR AD +LVYD+ SF + NW +E AS N + GNK D
Sbjct: 71 RFHALGPIYYRDADGALLVYDIMDRDSFTRVKNWVKELRKMASNK---NIVLTIAGNKSD 127
Query: 129 VD 130
+D
Sbjct: 128 MD 129
>gi|312067383|ref|XP_003136717.1| Rab5 [Loa loa]
Length = 221
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 6/132 (4%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 81
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D+
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQESFTKAKNWVKELQRQASP----NIVIALSGNKADL 137
Query: 130 DGGNSRVVCFGE 141
N RVV + E
Sbjct: 138 --ANKRVVEYEE 147
>gi|395860030|ref|XP_003802320.1| PREDICTED: ras-related protein Rab-13 [Otolemur garnettii]
Length = 201
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVNIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKEHASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 79/123 (64%), Gaps = 4/123 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 98 LFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAGQ 157
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 158 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 213
Query: 128 DVD 130
D++
Sbjct: 214 DME 216
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 84/123 (68%), Gaps = 4/123 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ + F+N + +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS SD D +++GNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS-SDVDR---MIIGNKC 123
Query: 128 DVD 130
D++
Sbjct: 124 DIE 126
>gi|449330155|gb|AGE96418.1| ras-like GTP-binding protein [Encephalitozoon cuniculi]
Length = 201
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 82/128 (64%), Gaps = 4/128 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M S + L K+I++G+SGVGKT LM +Y ++ +S +TIG DF K ++ LQ
Sbjct: 1 MDSECKYLFKMILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEVAGEKVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ +YRGA ++V+D+ S +SFDNL +W L + + +N
Sbjct: 61 IWDTAGQERFRAIISNYYRGAHGIIIVFDMGSKESFDNLGDW----LSEVRKNTSENVEI 116
Query: 121 VVLGNKID 128
++LGNK+D
Sbjct: 117 IILGNKVD 124
>gi|357440491|ref|XP_003590523.1| Ras-like protein [Medicago truncatula]
gi|355479571|gb|AES60774.1| Ras-like protein [Medicago truncatula]
Length = 234
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 89/142 (62%), Gaps = 10/142 (7%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R+ L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + +
Sbjct: 5 PARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVDGGNSRVVCF 139
+++GNK D+D S+ VC
Sbjct: 121 VNKILVGNKADMD--ESKRVCL 140
>gi|66803380|ref|XP_635533.1| GTP binding protein RARE7L [Dictyostelium discoideum AX4]
gi|74996583|sp|Q54FK7.1|RABL_DICDI RecName: Full=Ras-related protein RabL
gi|60463851|gb|EAL62023.1| GTP binding protein RARE7L [Dictyostelium discoideum AX4]
Length = 204
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+T+LK+I LGDS VGKTSL YVN ++ +IG D+ KE++ E++ L +WD
Sbjct: 3 EEKTMLKIITLGDSNVGKTSLFYHYVNGEYRYNRPPSIGPDYFIKELKVENKHVFLMVWD 62
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
T GQERFQ+ ++RGA+C L +D+++ +SF NL W +E + N PFV++
Sbjct: 63 TCGQERFQAFSPPYFRGANCYTLCFDIHNEESFINLGKWMDEIIKYCY----GNIPFVLV 118
Query: 124 GNKIDV 129
G K D+
Sbjct: 119 GTKSDI 124
>gi|159490221|ref|XP_001703081.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158270827|gb|EDO96660.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 218
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 82/123 (66%), Gaps = 4/123 (3%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
L+K++++GDSGVGK+ L+ ++ + F++ + TIG DF K+V E +L LQIWDTAG
Sbjct: 11 ALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVEGKLVKLQIWDTAG 70
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QERF+++ A+YRGA +LVYD+ SF+N+ NW AS DN +++GNK
Sbjct: 71 QERFRTITSAYYRGAQGIILVYDITDEGSFNNVRNWMRNIEQHAS----DNVNKILVGNK 126
Query: 127 IDV 129
+D+
Sbjct: 127 LDL 129
>gi|336374082|gb|EGO02419.1| hypothetical protein SERLA73DRAFT_175933 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387008|gb|EGO28153.1| hypothetical protein SERLADRAFT_458592 [Serpula lacrymans var.
lacrymans S7.9]
Length = 259
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 78/121 (64%), Gaps = 4/121 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
+K+++LG++ VGK+S++ ++V +F + + TIGA FLT++ + EDR+ +IWDTAGQE
Sbjct: 17 VKLVLLGEAAVGKSSVVLRFVTNEFQSNKEPTIGAAFLTQKCRLEDRVLRYEIWDTAGQE 76
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF SL +YR A V++YDV S D +W +E QA P N ++GNKID
Sbjct: 77 RFHSLAPMYYRNAQAAVVIYDVTKASSLDKAKSWVKELQRQAHP----NIVIALVGNKID 132
Query: 129 V 129
+
Sbjct: 133 L 133
>gi|328866963|gb|EGG15346.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 199
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 89/132 (67%), Gaps = 6/132 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLK++++GDSGVGK+ ++ ++ + +F++ Y +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 31 LLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKRIKLQIWDTAGQ 90
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYD+ SM SF+++ W + ASPS +++GNK
Sbjct: 91 ERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPS----VLKLIVGNKC 146
Query: 128 DVDGGNSRVVCF 139
D++ N R V F
Sbjct: 147 DLN--NKRAVDF 156
>gi|302848074|ref|XP_002955570.1| RabE/Rab8 [Volvox carteri f. nagariensis]
gi|549809|sp|P36861.1|YPTV2_VOLCA RecName: Full=GTP-binding protein yptV2
gi|409162|gb|AAA34251.1| GTP-binding protein [Volvox carteri]
gi|300259193|gb|EFJ43423.1| RabE/Rab8 [Volvox carteri f. nagariensis]
Length = 217
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 86/134 (64%), Gaps = 5/134 (3%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
L+K++++GDSGVGK+ L+ ++ + F++ + TIG DF K+V + +L LQIWDTAG
Sbjct: 12 ALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAG 71
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QERF+++ A+YRGA +LVYD+ SF+N+ NW AS DN +++GNK
Sbjct: 72 QERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHAS----DNVNKILVGNK 127
Query: 127 IDVDGGNSRVVCFG 140
+D+ + RVV
Sbjct: 128 LDL-AEDKRVVSIA 140
>gi|3551877|gb|AAC34837.1| GTP binding protein RARE7L [Dictyostelium discoideum]
Length = 232
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+T+LK+I LGDS VGKTSL YVN ++ +IG D+ KE++ E++ L +WD
Sbjct: 3 EEKTMLKIITLGDSNVGKTSLFYHYVNGEYRYNRPPSIGPDYFIKELKVENKHVFLMVWD 62
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
T GQERFQ+ ++RGA+C L +D+++ +SF NL W +E + N PFV++
Sbjct: 63 TCGQERFQAFSPPYFRGANCYTLCFDIHNEESFINLGKWMDEIIKYCY----GNIPFVLV 118
Query: 124 GNKIDV 129
G K D+
Sbjct: 119 GTKSDI 124
>gi|402469023|gb|EJW04091.1| small GTP-binding protein domain protein [Edhazardia aedis USNM
41457]
Length = 205
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 82/129 (63%), Gaps = 4/129 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + L K+I++G+SGVGKTSL+N+Y++ + Y +TIG DF K ++ L LQ
Sbjct: 1 METEYTHLFKIILIGNSGVGKTSLLNRYIDNTYHGNYISTIGVDFKIKTLKVSSDLIKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ A+YRGA ++V+D+ + SF + W +E +A+ +
Sbjct: 61 IWDTAGQERFRTITSAYYRGAHGIIIVFDMTDLDSFTKVTEWLDEIKARAN----EKVEI 116
Query: 121 VVLGNKIDV 129
++GNKID+
Sbjct: 117 YLIGNKIDL 125
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 91/140 (65%), Gaps = 6/140 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK++L++++ +F+ + K+TIG +F TK ++ ++ QIWDT+GQ
Sbjct: 8 LFKLVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATKNLEIDNHTVKAQIWDTSGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ SF N+ +W +E A P N +++GNK+
Sbjct: 68 ERYRAITGAYYRGAVGALLVYDITRQSSFQNVQHWLKELRDHADP----NIVIMLVGNKV 123
Query: 128 DVDGGNSRVVCFGEEGSSMV 147
D+ + +V E+G S+
Sbjct: 124 DLSESSRQVTT--EDGGSLA 141
>gi|324522951|gb|ADY48161.1| Ras-related protein Rab-5B [Ascaris suum]
Length = 217
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 82/133 (61%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V ++ +IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDETTVKFEIWDTAGQE 80
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ S +SF NW +E QASP N + GNK D
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITSQESFAKAKNWVKELQRQASP----NIVIALSGNKAD 136
Query: 129 VDGGNSRVVCFGE 141
+ N RVV + E
Sbjct: 137 L--ANKRVVEYEE 147
>gi|71019453|ref|XP_759957.1| hypothetical protein UM03810.1 [Ustilago maydis 521]
gi|46099503|gb|EAK84736.1| hypothetical protein UM03810.1 [Ustilago maydis 521]
Length = 769
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 58/135 (42%), Positives = 84/135 (62%), Gaps = 11/135 (8%)
Query: 5 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-----EDRLFTL 59
+RTL K++++GD G GKTS+ N +++ F Y+ATIGADF+TK + E TL
Sbjct: 99 KRTL-KIVLIGDGGCGKTSIRNHFLSNTFFPSYRATIGADFITKTLPIDPSKPEGEKATL 157
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSM-KSFDNLNNWREEFLIQASPSDPDN- 117
QIWDTAGQERFQSLG AFYRGAD ++ +DV ++ + + W F+ +A + D
Sbjct: 158 QIWDTAGQERFQSLGSAFYRGADAVIIAFDVTKGDQALERVKMWYNAFMQKAPGPETDEQ 217
Query: 118 ---FPFVVLGNKIDV 129
F ++ NK+D+
Sbjct: 218 RKRFVWICAANKVDL 232
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + +D++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E P N +++GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDP----NIVVMLVGNKS 128
Query: 128 DV 129
D+
Sbjct: 129 DL 130
>gi|297797521|ref|XP_002866645.1| hypothetical protein ARALYDRAFT_496719 [Arabidopsis lyrata subsp.
lyrata]
gi|297312480|gb|EFH42904.1| hypothetical protein ARALYDRAFT_496719 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 86/134 (64%), Gaps = 7/134 (5%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++ LGD GVGKTS++ ++ KF Y+ATIG DFL+K +++EDR F LQ+WDTAGQER
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTMRYEDRTFRLQLWDTAGQER 68
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F+SL ++ R + V+VYDV S +SF N + W EE + + V++GNK D+
Sbjct: 69 FKSLVPSYIRDSSVAVIVYDVASKQSFLNTSKWIEEVRAERGS----HVIIVLVGNKTDL 124
Query: 130 DGGNSRVVCFGEEG 143
N R V EEG
Sbjct: 125 --VNKRQVSI-EEG 135
>gi|353236709|emb|CCA68698.1| probable VPS21-Rab5-like GTPase involved in vacuolar protein
sorting [Piriformospora indica DSM 11827]
Length = 252
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 83/132 (62%), Gaps = 4/132 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+++ +K+++LG++ VGK+S++ ++VN +F + TIGA FLT++ + EDR+ +IW
Sbjct: 8 TQKPIQVKLVLLGEAAVGKSSVVMRFVNNEFQANKEPTIGAAFLTQKCRLEDRVLRYEIW 67
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF SL +YR A V+VYD+ S + +W +E QA+P N +
Sbjct: 68 DTAGQERFHSLAPMYYRNAQAAVVVYDITKAASLEKAKSWVKELQRQANP----NIVIAL 123
Query: 123 LGNKIDVDGGNS 134
GNK+D+ G +
Sbjct: 124 AGNKLDLVTGQA 135
>gi|66792866|ref|NP_001019711.1| ras-related protein Rab-13 [Bos taurus]
gi|75069879|sp|Q58DS5.1|RAB13_BOVIN RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|61553216|gb|AAX46369.1| RAB13, member RAS oncogene family [Bos taurus]
Length = 203
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|410987028|ref|XP_003999810.1| PREDICTED: ras-related protein Rab-13 [Felis catus]
Length = 203
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVQRLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|393909277|gb|EFO27359.2| Ras-like protein Rab-5A [Loa loa]
Length = 217
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 82/133 (61%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQESFTKAKNWVKELQRQASP----NIVIALSGNKAD 136
Query: 129 VDGGNSRVVCFGE 141
+ N RVV + E
Sbjct: 137 L--ANKRVVEYEE 147
>gi|311254230|ref|XP_001927266.2| PREDICTED: ras-related protein Rab-13 [Sus scrofa]
Length = 203
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|299470741|emb|CBN79787.1| Rab22, RAB family GTPase [Ectocarpus siliculosus]
Length = 136
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 80/135 (59%), Gaps = 5/135 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR R + KV++LGD+GVGK+SL++++V F ++TIGA F++K + + Q
Sbjct: 7 MDSRSREV-KVVLLGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQ 65
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQE++ SL +YRGA ++VYD+ M SF L W E Q P +
Sbjct: 66 IWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQG----PQDIAI 121
Query: 121 VVLGNKIDVDGGNSR 135
V GNK D++ ++
Sbjct: 122 AVAGNKRDLESQRTK 136
>gi|403346064|gb|EJY72416.1| RAB-2,4,14, putative [Oxytricha trifallax]
Length = 222
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 86/136 (63%), Gaps = 7/136 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K II+GD+GVGK+ L+ Q+ +K+F Q+ TIG +F + VQ +++ LQIWDTAGQ
Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFRQQHDLTIGVEFGARTVQIQNKNIKLQIWDTAGQ 65
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E F+S+ ++YRGA +LVYD+ +F++L W EE +P + +++GNK
Sbjct: 66 ESFKSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEVRQNGNP----DMTIMLIGNKC 121
Query: 128 DVDGGNSRVVCFGEEG 143
D+D R V F EEG
Sbjct: 122 DLDA--RRQVSF-EEG 134
>gi|402595096|gb|EJW89022.1| rab family protein 8 [Wuchereria bancrofti]
Length = 209
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 84/123 (68%), Gaps = 4/123 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ + F+N + +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS SD D +++GNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS-SDVDR---MIIGNKC 123
Query: 128 DVD 130
D++
Sbjct: 124 DIE 126
>gi|338725027|ref|XP_003365067.1| PREDICTED: ras-related protein Rab-13-like [Equus caballus]
Length = 203
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|307949529|gb|ADN96600.1| Rab GTPase 2d [Euplotes octocarinatus]
Length = 217
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 92/149 (61%), Gaps = 10/149 (6%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ K II+GDS VGK+ L+ Q+ +K+F + + TIG +F ++ VQ D+ LQIWDTAGQ
Sbjct: 9 VFKYIIVGDSAVGKSCLLLQFTDKRFKSTHDLTIGVEFGSRTVQINDKAIKLQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E F+S+ ++YRG+ +LVYDV +SF+NL W EE A +++GNKI
Sbjct: 69 ESFRSITRSYYRGSIGALLVYDVTKRQSFENLQKWLEEMKENAY----SKMTTILIGNKI 124
Query: 128 DVDGGNSRVVCFGEEGSSMVCLQRKYSLL 156
D++ N R V + EEG + +K+ L+
Sbjct: 125 DLE--NERQVSY-EEGQAFA---KKHDLV 147
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 10 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 69
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 70 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 125
Query: 128 DVDG 131
D++
Sbjct: 126 DMEA 129
>gi|390476751|ref|XP_003735179.1| PREDICTED: ras-related protein Rab-13-like [Callithrix jacchus]
Length = 203
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|170587854|ref|XP_001898689.1| Ras-related protein Rab-5B [Brugia malayi]
gi|158593959|gb|EDP32553.1| Ras-related protein Rab-5B, putative [Brugia malayi]
Length = 217
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 82/133 (61%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQESFAKAKNWVKELQRQASP----NIVIALSGNKAD 136
Query: 129 VDGGNSRVVCFGE 141
+ N RVV + E
Sbjct: 137 L--ANKRVVEYEE 147
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GD+GVGK++L++++ +FS + K+TIG +F T+ +Q E ++ QIWDTAGQ
Sbjct: 11 LFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQ 70
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ SFDN+ W +E A N +++GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADA----NIVIMLVGNKS 126
Query: 128 DV 129
D+
Sbjct: 127 DL 128
>gi|392571435|gb|EIW64607.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 242
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K II+G++G GKT L++Q+ + F + + TIG +F ++ V+ ++ LQ+WDTAGQ
Sbjct: 20 LMKYIIIGEAGTGKTCLLHQFTHNSFKDHSQHTIGVEFSSRTVKLGEKRIKLQLWDTAGQ 79
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+S+ ++YRGA +LVYD+ S SF NL W E+ ASP + V++GNK
Sbjct: 80 ERFRSVTRSYYRGAAGAILVYDITSRASFSNLARWLEDARALASP----HLVTVLVGNKS 135
Query: 128 D 128
D
Sbjct: 136 D 136
>gi|145494342|ref|XP_001433165.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834436|emb|CAI44545.1| rab_B11 [Paramecium tetraurelia]
gi|124400282|emb|CAK65768.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+KVI+LGDSGVGKT+++ QY ++KFS Y ATIG DF K + ED+ LQIWDTAGQ
Sbjct: 9 LVKVIVLGDSGVGKTNILTQYCDQKFSQNYMATIGVDFKIKTITVEDKKIKLQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +Y+GA + VY + SF+N+ W + + + D +++GNK+
Sbjct: 69 ERFRNITQTYYKGAFGIIFVYSIVDRNSFNNVETWIKSI----TENTTDEVCSILVGNKM 124
Query: 128 D 128
D
Sbjct: 125 D 125
>gi|403336186|gb|EJY67281.1| Small rab-related GTPase [Oxytricha trifallax]
Length = 210
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 84/133 (63%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
+ V+ILGD VGK+S++ QY N+KF+NQ+ T+G DF+ + + D+ + ++IWDTAGQE
Sbjct: 1 MHVMILGDGAVGKSSILKQYHNQKFTNQHIKTLGVDFIQTQFKKGDQTYEVKIWDTAGQE 60
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ FYR A+ ++ +D+ + SFDN+ W A PS V++GNKID
Sbjct: 61 RFKTITYQFYRQANGMIIAFDITNQLSFDNVKTWMNSIYKHADPS----IAKVLVGNKID 116
Query: 129 VDGGNSRVVCFGE 141
++ RV+ E
Sbjct: 117 LE--EERVISKQE 127
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ + E ++ QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA VLVYDV+ +FDN++ W +E A N +++GNK
Sbjct: 74 ERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADA----NIRIMLVGNKT 129
Query: 128 DV 129
D+
Sbjct: 130 DL 131
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|384244926|gb|EIE18423.1| Rab8/RabE-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 210
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 83/129 (64%), Gaps = 4/129 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ F++ + TIG DF K++ +++ LQIWDTAGQ
Sbjct: 11 LIKLLLIGDSGVGKSCLLLRFSEDSFTSSFITTIGIDFKIKKILIDNKWIKLQIWDTAGQ 70
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF+N+ NW AS DN V++GNK
Sbjct: 71 ERFRTITSAYYRGAMGILLVYDVTDESSFNNIRNWMRNIEQHAS----DNVNKVLVGNKC 126
Query: 128 DVDGGNSRV 136
D+D RV
Sbjct: 127 DMDESKRRV 135
>gi|301774282|ref|XP_002922543.1| PREDICTED: ras-related protein Rab-13-like [Ailuropoda melanoleuca]
gi|281350220|gb|EFB25804.1| hypothetical protein PANDA_011544 [Ailuropoda melanoleuca]
Length = 203
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F+ + K+TIG +F TK +Q E+++ QIWDTAGQ
Sbjct: 65 LFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENKIIKAQIWDTAGQ 124
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +F+N W +E A N +++GNK
Sbjct: 125 ERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHA----ESNIVVMLVGNKC 180
Query: 128 DV 129
D+
Sbjct: 181 DL 182
>gi|4506363|ref|NP_002861.1| ras-related protein Rab-13 isoform 1 [Homo sapiens]
gi|386782037|ref|NP_001248220.1| ras-related protein Rab-13 [Macaca mulatta]
gi|297663399|ref|XP_002810164.1| PREDICTED: ras-related protein Rab-13 [Pongo abelii]
gi|332220479|ref|XP_003259383.1| PREDICTED: ras-related protein Rab-13 [Nomascus leucogenys]
gi|332810355|ref|XP_522433.3| PREDICTED: ras-related protein Rab-13 [Pan troglodytes]
gi|397492531|ref|XP_003817175.1| PREDICTED: ras-related protein Rab-13 [Pan paniscus]
gi|402856334|ref|XP_003892746.1| PREDICTED: ras-related protein Rab-13 [Papio anubis]
gi|426331749|ref|XP_004026857.1| PREDICTED: ras-related protein Rab-13 [Gorilla gorilla gorilla]
gi|1710016|sp|P51153.1|RAB13_HUMAN RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell
growth-inhibiting gene 4 protein; Flags: Precursor
gi|20379072|gb|AAM21096.1|AF498948_1 small GTP binding protein RAB13 [Homo sapiens]
gi|452320|emb|CAA53266.1| rab 13 [Homo sapiens]
gi|12654003|gb|AAH00799.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|41350395|gb|AAS00485.1| growth-inhibiting gene 4 protein [Homo sapiens]
gi|54696268|gb|AAV38506.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|54696270|gb|AAV38507.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|61356004|gb|AAX41198.1| RAB13 member RAS oncogene family [synthetic construct]
gi|61356015|gb|AAX41199.1| RAB13 member RAS oncogene family [synthetic construct]
gi|68085671|gb|AAH73168.2| RAB13, member RAS oncogene family [Homo sapiens]
gi|117645128|emb|CAL38030.1| hypothetical protein [synthetic construct]
gi|117645354|emb|CAL38143.1| hypothetical protein [synthetic construct]
gi|117645750|emb|CAL38342.1| hypothetical protein [synthetic construct]
gi|117646294|emb|CAL38614.1| hypothetical protein [synthetic construct]
gi|117646436|emb|CAL38685.1| hypothetical protein [synthetic construct]
gi|117646828|emb|CAL37529.1| hypothetical protein [synthetic construct]
gi|119573633|gb|EAW53248.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573634|gb|EAW53249.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573635|gb|EAW53250.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|158256592|dbj|BAF84269.1| unnamed protein product [Homo sapiens]
gi|208967230|dbj|BAG73629.1| RAB13, member RAS oncogene family [synthetic construct]
gi|355558499|gb|EHH15279.1| hypothetical protein EGK_01346 [Macaca mulatta]
gi|380785379|gb|AFE64565.1| ras-related protein Rab-13 [Macaca mulatta]
gi|384942334|gb|AFI34772.1| ras-related protein Rab-13 [Macaca mulatta]
gi|740475|prf||2005309B rab13 GTPase
Length = 203
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|90085076|dbj|BAE91279.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|403302550|ref|XP_003941919.1| PREDICTED: ras-related protein Rab-13 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|54696266|gb|AAV38505.1| RAB13, member RAS oncogene family [synthetic construct]
gi|61365863|gb|AAX42775.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|255071631|ref|XP_002499490.1| ras-related gtp-binding rab2-like protein [Micromonas sp. RCC299]
gi|226514752|gb|ACO60748.1| ras-related gtp-binding rab2-like protein [Micromonas sp. RCC299]
Length = 220
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K II+GD+GVGK+ L+ Q+ +K+F + + TIG +F ++ V DR LQIWDTAGQ
Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQHVHDLTIGVEFGSRMVSINDRQIKLQIWDTAGQ 65
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E F+S+ ++YRGA +LVYD+ ++F++L++W E+ A+P N +++GNK
Sbjct: 66 ESFRSITRSYYRGAAGALLVYDITRRETFEHLSSWLEDARQHANP----NMTIMLIGNKS 121
Query: 128 DV 129
DV
Sbjct: 122 DV 123
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 80/124 (64%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V+ E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|60826641|gb|AAX36766.1| RAB13 member RAS oncogene family [synthetic construct]
gi|60826676|gb|AAX36767.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|395323826|gb|EJF56281.1| GTP-binding protein ypt1 [Dichomitus squalens LYAD-421 SS1]
Length = 206
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 81/129 (62%), Gaps = 4/129 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MP L K++++GDSGVGK+ L+ ++ F++ Y +TIG DF + ++ E R LQ
Sbjct: 1 MPDGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGRTVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF+++ A+YRGA ++VYDV ++F N+ W +E AS +
Sbjct: 61 IWDTAGQERFRTIAAAYYRGAHGIIMVYDVTDGETFSNVKGWMQEIERYAS----EGVKK 116
Query: 121 VVLGNKIDV 129
+++GNK D+
Sbjct: 117 LIIGNKSDL 125
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 82/130 (63%), Gaps = 6/130 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ KV+++GDS VGK+ L+ ++ +FS KATIG +F T+ +Q + R QIWDTAGQ
Sbjct: 17 VFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIWDTAGQ 76
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +SFD++ W EE A N +++GNK
Sbjct: 77 ERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHAD----KNLVIMLIGNKS 132
Query: 128 DVDGGNSRVV 137
D+ G RVV
Sbjct: 133 DL--GTLRVV 140
>gi|324521795|gb|ADY47928.1| Ras-related protein Rab-8B [Ascaris suum]
Length = 223
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 84/123 (68%), Gaps = 4/123 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ + F+N + +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 22 LFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEVDGKKIKLQIWDTAGQ 81
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS SD D +++GNK
Sbjct: 82 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS-SDVDR---MIIGNKC 137
Query: 128 DVD 130
DV+
Sbjct: 138 DVE 140
>gi|301123057|ref|XP_002909255.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
gi|262100017|gb|EEY58069.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
Length = 203
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 88/132 (66%), Gaps = 6/132 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + F+ Y TIG DF + V+ +++ LQIWDTAGQ
Sbjct: 8 LFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGAD ++VYDV S +SFD++N+W E AS +++GNK
Sbjct: 68 ERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCK----LLVGNKS 123
Query: 128 DVDGGNSRVVCF 139
D+ +++VV +
Sbjct: 124 DI--SDNKVVSY 133
>gi|209877729|ref|XP_002140306.1| Ras family protein Rab-1A [Cryptosporidium muris RN66]
gi|209555912|gb|EEA05957.1| Ras family protein Rab-1A, putative [Cryptosporidium muris RN66]
Length = 211
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 87/138 (63%), Gaps = 5/138 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + F++ Y TIG DF + V+ +D++ LQIWDTAGQ
Sbjct: 12 LFKLVLIGDSGVGKSCLLLRFADDSFTDSYITTIGVDFRFRTVKIDDKIIKLQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGAD VLVYD SFD++++W E + S +++GNK
Sbjct: 72 ERFRTITSAYYRGADGVVLVYDTTLQSSFDHIDDWISEVDRYTTDSSK-----ILVGNKC 126
Query: 128 DVDGGNSRVVCFGEEGSS 145
D+ + GE+ SS
Sbjct: 127 DLVAQRAIEQSQGEKKSS 144
>gi|410222046|gb|JAA08242.1| RAB13, member RAS oncogene family [Pan troglodytes]
Length = 203
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 83/122 (68%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK++L++++ +F+ + K+TIG +F TK + + ++ QIWDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ +A+YRGA +LVYDV +F+N+N W +E P N ++LGNK
Sbjct: 73 ERYRAITIAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDP----NIVVMLLGNKS 128
Query: 128 DV 129
D+
Sbjct: 129 DL 130
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ +Y + F+ + +TIG DF K ++ E + LQIWDTAGQ
Sbjct: 14 LFKLLLIGDSGVGKTCVLFRYADDTFNTTFISTIGIDFKIKTIELEGKRIKLQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF ++ ++YRGA +LVYD+ + KSFDN+ W + + AS + +++GNK
Sbjct: 74 ERFHTITTSYYRGAMGIILVYDITNQKSFDNITKWLQNIEMHASA----DVERILIGNKC 129
Query: 128 D 128
D
Sbjct: 130 D 130
>gi|291237548|ref|XP_002738700.1| PREDICTED: RAB5B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 217
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 5/129 (3%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++++G++GVGK+SL QYV +F + TIGA F +K + E+ L LQIWDTAG E+
Sbjct: 20 KLVLVGEAGVGKSSLAMQYVRGEFDKDMQTTIGAAFTSKTLHVENALIELQIWDTAGTEK 79
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
+ SL +YRGA ++VYD+ +F +N+W E QA+P N ++ GNK D+
Sbjct: 80 YHSLASMYYRGAHAAIVVYDITQQTTFLRVNSWVRELHRQATP----NIAIILAGNKADL 135
Query: 130 DGGNSRVVC 138
+ +V C
Sbjct: 136 E-DTRKVSC 143
>gi|61365868|gb|AAX42776.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GD+GVGK++L++++ +FS + K+TIG +F T+ +Q E ++ QIWDTAGQ
Sbjct: 12 LFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ SFDN+ W +E A N +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADA----NIVIMLVGNKS 127
Query: 128 DV 129
D+
Sbjct: 128 DL 129
>gi|67470129|ref|XP_651035.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56467717|gb|EAL45649.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790064|dbj|BAD82828.1| small GTPase EhRabC8 [Entamoeba histolytica]
gi|449709773|gb|EMD48974.1| small GTPase EhRabC8, putative [Entamoeba histolytica KU27]
Length = 195
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 81/128 (63%), Gaps = 5/128 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + K++++G+S VGKTSL+ +Y F + +T+G DF KE++ + L LQ
Sbjct: 1 MTQEPNYVFKILMIGESSVGKTSLVKRYCEGMFLEEMMSTVGIDFEFKELKIGETLVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
IWDTAGQERF ++ +++RG C++VYDVN +++F+ LN W EE+ + N
Sbjct: 61 IWDTAGQERFHNVTSSYFRGTHGCIIVYDVNKLETFEKLNYWIEEY-----RDEQPNSEI 115
Query: 121 VVLGNKID 128
+++GNKID
Sbjct: 116 IIVGNKID 123
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 93/141 (65%), Gaps = 7/141 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT ++ ++ +F++ + +TIG DF K ++ +D+ LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCILFRFSEDQFNSTFISTIGIDFKIKTIELDDKKIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ + KSFDN+ W + Q + SD + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITAEKSFDNIKTWIRN-IEQNASSDVER---MILGNKC 123
Query: 128 DVDGGNSRVVCFGEEGSSMVC 148
D++ + RVV E+G +
Sbjct: 124 DME--DKRVVS-TEQGEKLAA 141
>gi|402221866|gb|EJU01934.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 260
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 80/128 (62%), Gaps = 4/128 (3%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P + +K+++LG++ VGK+S++ ++V FS + TIGA FLT++ + EDR+ +I
Sbjct: 8 PVDKPVQVKLVLLGEAAVGKSSVVMRFVQNDFSENKEPTIGAAFLTQKCRLEDRVLRYEI 67
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF SL +YR A V+VYD+ S + +W +E QA+P N
Sbjct: 68 WDTAGQERFHSLAPMYYRNAQAAVVVYDITKASSLEKAKSWVKELQRQANP----NIVIA 123
Query: 122 VLGNKIDV 129
++GNK+D+
Sbjct: 124 LVGNKLDL 131
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + ++TIG +F TK VQ +D+L QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA ++VYDV +FDN W E N +++GNK
Sbjct: 74 ERYRAITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDA----NIVVMLVGNKA 129
Query: 128 DV 129
D+
Sbjct: 130 DL 131
>gi|430811133|emb|CCJ31387.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 203
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 91/146 (62%), Gaps = 9/146 (6%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + R+ K++ LGD VGKTSL+ +++ F N Y+ATIG DFL+K + EDR LQ
Sbjct: 5 MTTSRK--FKLVFLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQ 62
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERF+SL ++ R + ++VYD+ + SF N N W ++ I+A ++
Sbjct: 63 LWDTAGQERFRSLIASYIRDSSVAIVVYDITNRTSFINTNRWIDD--IKAERG--NDVII 118
Query: 121 VVLGNKIDVDGGNSRVVCFGEEGSSM 146
V++GNK D++ N R V EEG M
Sbjct: 119 VIVGNKTDLN--NKRQVT-TEEGEKM 141
>gi|17736973|ref|NP_523457.1| Rab5, isoform E [Drosophila melanogaster]
gi|24581101|ref|NP_722795.1| Rab5, isoform A [Drosophila melanogaster]
gi|24581103|ref|NP_722796.1| Rab5, isoform B [Drosophila melanogaster]
gi|24581105|ref|NP_722797.1| Rab5, isoform C [Drosophila melanogaster]
gi|24581107|ref|NP_722798.1| Rab5, isoform D [Drosophila melanogaster]
gi|24581110|ref|NP_722799.1| Rab5, isoform F [Drosophila melanogaster]
gi|442625421|ref|NP_001259925.1| Rab5, isoform G [Drosophila melanogaster]
gi|442625423|ref|NP_001259926.1| Rab5, isoform H [Drosophila melanogaster]
gi|442625425|ref|NP_001259927.1| Rab5, isoform I [Drosophila melanogaster]
gi|194854678|ref|XP_001968400.1| GG24527 [Drosophila erecta]
gi|195341957|ref|XP_002037568.1| GM18235 [Drosophila sechellia]
gi|195470737|ref|XP_002087663.1| GE15124 [Drosophila yakuba]
gi|195576007|ref|XP_002077868.1| GD22841 [Drosophila simulans]
gi|6517198|dbj|BAA87879.1| Drab5 [Drosophila melanogaster]
gi|6561903|dbj|BAA88244.1| Rab5 protein [Drosophila melanogaster]
gi|7295967|gb|AAF51265.1| Rab5, isoform A [Drosophila melanogaster]
gi|16648234|gb|AAL25382.1| GH24702p [Drosophila melanogaster]
gi|22945400|gb|AAN10422.1| Rab5, isoform B [Drosophila melanogaster]
gi|22945401|gb|AAN10423.1| Rab5, isoform C [Drosophila melanogaster]
gi|22945402|gb|AAN10424.1| Rab5, isoform D [Drosophila melanogaster]
gi|22945403|gb|AAN10425.1| Rab5, isoform E [Drosophila melanogaster]
gi|22945404|gb|AAN10426.1| Rab5, isoform F [Drosophila melanogaster]
gi|27227445|gb|AAN85552.1| Rab5 [Drosophila melanogaster]
gi|27227447|gb|AAN85553.1| Rab5 [Drosophila melanogaster]
gi|51477136|tpg|DAA01061.1| TPA_exp: Rab5 [Drosophila melanogaster]
gi|190660267|gb|EDV57459.1| GG24527 [Drosophila erecta]
gi|194132418|gb|EDW53986.1| GM18235 [Drosophila sechellia]
gi|194173764|gb|EDW87375.1| GE15124 [Drosophila yakuba]
gi|194189877|gb|EDX03453.1| GD22841 [Drosophila simulans]
gi|220945650|gb|ACL85368.1| Rab5-PA [synthetic construct]
gi|220955442|gb|ACL90264.1| Rab5-PA [synthetic construct]
gi|440213189|gb|AGB92462.1| Rab5, isoform G [Drosophila melanogaster]
gi|440213190|gb|AGB92463.1| Rab5, isoform H [Drosophila melanogaster]
gi|440213191|gb|AGB92464.1| Rab5, isoform I [Drosophila melanogaster]
Length = 219
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ + ED + +IWDTAGQE
Sbjct: 30 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 89
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + SF W +E QASP N + GNK D
Sbjct: 90 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASP----NIVIALAGNKAD 145
Query: 129 VDGGNSRVVCFGE 141
+ N RVV F E
Sbjct: 146 LS--NIRVVEFDE 156
>gi|18543235|ref|NP_569921.1| Rab27, isoform C [Drosophila melanogaster]
gi|16768612|gb|AAL28525.1| GM10914p [Drosophila melanogaster]
gi|22831493|gb|AAF45634.2| Rab27, isoform C [Drosophila melanogaster]
gi|28317210|gb|AAO39612.1| GH17339p [Drosophila melanogaster]
gi|40788406|dbj|BAD07036.1| Rab27 [Drosophila melanogaster]
gi|220953266|gb|ACL89176.1| Rab27-PC [synthetic construct]
Length = 230
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 77/126 (61%), Gaps = 7/126 (5%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----LFTLQIWD 63
LLK ++LGDSGVGKT L+ QY + +F Q+ +T+G DF K + + R LQIWD
Sbjct: 11 LLKFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWD 70
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL 123
TAGQERF+SL AFYR A +L++D+ S KSF NW + A DPD V+
Sbjct: 71 TAGQERFRSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPD---VVLC 127
Query: 124 GNKIDV 129
GNK D+
Sbjct: 128 GNKCDL 133
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 79/123 (64%), Gaps = 4/123 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ FS Y +TIG DF + V+ E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFSEDSFSGTYISTIGIDFKIRTVEVEGKRIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 123
Query: 128 DVD 130
D++
Sbjct: 124 DME 126
>gi|63102287|gb|AAH94846.1| RAB13 protein, partial [Homo sapiens]
Length = 244
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 49 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 108
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 109 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 164
Query: 128 DVDG 131
D++
Sbjct: 165 DMEA 168
>gi|145509483|ref|XP_001440680.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834542|emb|CAI44578.1| rab_A11 [Paramecium tetraurelia]
gi|124407908|emb|CAK73283.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+KVI+LGDSGVGKT+++ QY ++KFS Y ATIG DF K + ED+ LQIWDTAGQ
Sbjct: 9 LVKVIVLGDSGVGKTNILTQYCDQKFSQNYMATIGVDFKIKTITVEDKKIKLQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ +Y+GA + VY + SF+N+ W + + + D +++GNK+
Sbjct: 69 ERFRNITQTYYKGAFGIIFVYSIVDRNSFNNVETW----IKSITENTTDEVCSILVGNKM 124
Query: 128 D 128
D
Sbjct: 125 D 125
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 82/131 (62%), Gaps = 4/131 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + L K++++GDSGVGKT L+ ++ F++ Y +TIG DF K ++ E + LQ
Sbjct: 1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERF+++ A+YRGA +LVYD+ KS++N+ NW + AS
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASA----GVSR 116
Query: 121 VVLGNKIDVDG 131
++LGNK D++
Sbjct: 117 MLLGNKCDIEA 127
>gi|357440495|ref|XP_003590525.1| Ras-like protein [Medicago truncatula]
gi|355479573|gb|AES60776.1| Ras-like protein [Medicago truncatula]
Length = 197
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 89/141 (63%), Gaps = 10/141 (7%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R+ L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + +
Sbjct: 5 PARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVDGGNSRVVC 138
+++GNK D+D S+ VC
Sbjct: 121 VNKILVGNKADMD--ESKRVC 139
>gi|300121600|emb|CBK22118.2| unnamed protein product [Blastocystis hominis]
Length = 182
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 89/138 (64%), Gaps = 4/138 (2%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
+ K++++GDSGVGK+SL+ ++ + F+ + +TIG DF + V+ D+ LQIWDTAGQ
Sbjct: 17 MFKIVLVGDSGVGKSSLLLRFADGAFTESFISTIGVDFRFRTVEVLDKSVKLQIWDTAGQ 76
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+Y+GAD ++VYDV ++F ++ +W +E IQ +DP P ++GNK
Sbjct: 77 ERFRTITSAYYKGADGIMIVYDVTDTETFKDMEDWHKE--IQ-KFTDP-GIPICIIGNKS 132
Query: 128 DVDGGNSRVVCFGEEGSS 145
D+ G+E +S
Sbjct: 133 DLTEKKEVAAAVGKEYAS 150
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 84/123 (68%), Gaps = 4/123 (3%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
T+L V+++GDSGVGK++L++++ +F+ K+TIG +F T+ +Q + + QIWDTAG
Sbjct: 2 TVLTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAG 61
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QER++++ A+YRGA +LVYD++ +++DN+N W +E A N +++GNK
Sbjct: 62 QERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADS----NIVIMLVGNK 117
Query: 127 IDV 129
D+
Sbjct: 118 SDL 120
>gi|223996783|ref|XP_002288065.1| at-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220977181|gb|EED95508.1| at-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 197
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 84/126 (66%), Gaps = 1/126 (0%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GD+GVGK+S++ ++ + F ++TIG DF K ++ ++ L +WDTAGQ
Sbjct: 21 LFKLLMIGDAGVGKSSMLIRFTDDAFDEHIQSTIGVDFKVKHLELNNKRIKLTVWDTAGQ 80
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF++L ++YRGA V+VYDV SFDNL W +E + SP++ + +++GNKI
Sbjct: 81 ERFRTLTSSYYRGAQGVVMVYDVTRRDSFDNLEQWLKEVKL-YSPNNGEGVVKLLVGNKI 139
Query: 128 DVDGGN 133
D+ G+
Sbjct: 140 DLADGD 145
>gi|343424884|emb|CBQ68422.1| related to YPT7-GTP-binding protein of the RAB family [Sporisorium
reilianum SRZ2]
Length = 632
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 58/133 (43%), Positives = 85/133 (63%), Gaps = 9/133 (6%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-----DRLFTLQIWD 63
+KV+++GD G GKTS+ N+++ + F Y+ATIGADF+T+ + + TLQIWD
Sbjct: 75 IKVVLIGDGGSGKTSIRNRFLTRTFFPSYRATIGADFVTRTLPLDPAHPDGAKATLQIWD 134
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNS-MKSFDNLNNWREEFLIQA-SPSDPDN--FP 119
TAGQERFQSLG AFYRGAD V+ +D + ++ + + W E F+ +A PS ++ F
Sbjct: 135 TAGQERFQSLGSAFYRGADAVVIAFDASKGAEALERVKGWYEAFMAKAPGPSGEEHGRFC 194
Query: 120 FVVLGNKIDVDGG 132
+V NK D+ G
Sbjct: 195 WVCAANKADLGTG 207
>gi|392571611|gb|EIW64783.1| GTP-binding protein ypt5 [Trametes versicolor FP-101664 SS1]
Length = 254
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 79/127 (62%), Gaps = 4/127 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ R +K+++LG++ VGK+S++ ++V+ +F + TIGA FLT++ + EDR+ +IW
Sbjct: 9 TERSVQVKLVLLGEAAVGKSSIVLRFVSNEFQPNKEPTIGAAFLTQKCRLEDRVLRYEIW 68
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF SL +YR A V+VYDV S + W +E QA+P N +
Sbjct: 69 DTAGQERFHSLAPMYYRNAQAAVVVYDVTKASSLEKAKTWVKELQRQANP----NIVIAL 124
Query: 123 LGNKIDV 129
GNKID+
Sbjct: 125 AGNKIDL 131
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R+ L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + +
Sbjct: 5 PARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVD 130
+++GNK D+D
Sbjct: 121 VNKILVGNKADMD 133
>gi|440798051|gb|ELR19123.1| RAB36 member RAS oncogene family protein [Acanthamoeba castellanii
str. Neff]
Length = 273
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 74/103 (71%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
KVI++GD VGKTSL+ ++ KF++QYKATIG DF+ ++ + + FTL IWDTAGQE+
Sbjct: 58 KVIVVGDHSVGKTSLVRRFCEGKFTDQYKATIGVDFIYQKYRILKQDFTLHIWDTAGQEQ 117
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASP 112
F+ + A++RGA +L +D++S +SFDN W EE L + +P
Sbjct: 118 FRCISKAYFRGASGSILAFDLSSKESFDNTRAWLEEVLREVTP 160
>gi|395334217|gb|EJF66593.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 252
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 79/127 (62%), Gaps = 4/127 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ R +K+++LG++ VGK+S++ ++V+ +F + TIGA FLT++ + EDR+ +IW
Sbjct: 9 TERSVQVKLVLLGEAAVGKSSIVLRFVSNEFQPNKEPTIGAAFLTQKCRLEDRVLRYEIW 68
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF SL +YR A V+VYDV S + W +E QA+P N +
Sbjct: 69 DTAGQERFHSLAPMYYRNAQAAVVVYDVTKASSLEKAKTWVKELQRQANP----NIVIAL 124
Query: 123 LGNKIDV 129
GNKID+
Sbjct: 125 AGNKIDL 131
>gi|195115058|ref|XP_002002084.1| GI17188 [Drosophila mojavensis]
gi|193912659|gb|EDW11526.1| GI17188 [Drosophila mojavensis]
Length = 216
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ + ED + +IWDTAGQE
Sbjct: 29 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 88
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + SF W +E QASP N + GNK D
Sbjct: 89 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASP----NIVIALAGNKAD 144
Query: 129 VDGGNSRVVCFGE 141
+ N RVV F E
Sbjct: 145 LS--NIRVVEFDE 155
>gi|71417072|ref|XP_810463.1| small GTP-binding protein Rab11 [Trypanosoma cruzi strain CL
Brener]
gi|70874996|gb|EAN88612.1| small GTP-binding protein Rab11, putative [Trypanosoma cruzi]
Length = 217
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 4/122 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
KV+I+GDSGVGK++LM +Y +FS ATIG +F+TK ++ E R +QIWDTAGQE
Sbjct: 8 FKVVIIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQE 67
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ + Y GA +LVYD+ + SFD++ W +E + P ++GNK D
Sbjct: 68 RFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFV----PATCSIFLIGNKCD 123
Query: 129 VD 130
++
Sbjct: 124 LE 125
>gi|340055447|emb|CCC49766.1| Rab11A GTPase [Trypanosoma vivax Y486]
Length = 219
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 77/122 (63%), Gaps = 4/122 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
KV+I+GDSGVGK++LM +Y +FS ATIG +F+TK ++ E R +QIWDTAGQE
Sbjct: 8 FKVVIVGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQE 67
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ + Y GA VLVYD+ + SFD++ W +E P ++GNK D
Sbjct: 68 RFRAISRSIYHGAKGAVLVYDITNQTSFDSIPTWLQELRAFV----PATCSIFLIGNKCD 123
Query: 129 VD 130
++
Sbjct: 124 LE 125
>gi|432858229|ref|XP_004068856.1| PREDICTED: ras-related protein Rab-22A-like [Oryzias latipes]
Length = 194
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LKV +LGD+GVGKTS++ ++V F TIGA F+TK VQ+++ L IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKTSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF++L +YRG+ V+VYD+ SF L NW +E P N + GNK D
Sbjct: 66 RFRALAPMYYRGSAAAVIVYDITKEDSFQTLKNWVKELRQHGPP----NIVVAIAGNKCD 121
Query: 129 V 129
+
Sbjct: 122 L 122
>gi|395532013|ref|XP_003768067.1| PREDICTED: ras-related protein Rab-13 [Sarcophilus harrisii]
Length = 195
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 80/123 (65%), Gaps = 4/123 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V+ E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 123
Query: 128 DVD 130
D++
Sbjct: 124 DME 126
>gi|71410719|ref|XP_807641.1| small GTP-binding protein Rab11 [Trypanosoma cruzi strain CL
Brener]
gi|70871685|gb|EAN85790.1| small GTP-binding protein Rab11, putative [Trypanosoma cruzi]
Length = 217
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 4/122 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
KV+I+GDSGVGK++LM +Y +FS ATIG +F+TK ++ E R +QIWDTAGQE
Sbjct: 8 FKVVIIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQE 67
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ + Y GA +LVYD+ + SFD++ W +E + P ++GNK D
Sbjct: 68 RFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFV----PATCSIFLIGNKCD 123
Query: 129 VD 130
++
Sbjct: 124 LE 125
>gi|431892392|gb|ELK02832.1| Ras-related protein Rab-13 [Pteropus alecto]
Length = 184
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKS 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R+ L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + +
Sbjct: 5 PARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVD 130
+++GNK D+D
Sbjct: 121 VNKILVGNKADMD 133
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 51/122 (41%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV++ GDSGVGK++L++++ +F+ + K+TIG +F TK V+ + R QIWDTAGQ
Sbjct: 16 LFKVVLTGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQIWDTAGQ 75
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ ++F+NL +W E A P + +++GNK
Sbjct: 76 ERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRGHAEP----DIVIMLVGNKC 131
Query: 128 DV 129
D+
Sbjct: 132 DL 133
>gi|407867485|gb|EKG08588.1| small GTP-binding protein Rab11, putative,Rab11 GTPase, putative
[Trypanosoma cruzi]
Length = 217
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 4/122 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
KV+I+GDSGVGK++LM +Y +FS ATIG +F+TK ++ E R +QIWDTAGQE
Sbjct: 8 FKVVIIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQE 67
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ + Y GA +LVYD+ + SFD++ W +E + P ++GNK D
Sbjct: 68 RFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFV----PATCSIFLIGNKCD 123
Query: 129 VD 130
++
Sbjct: 124 LE 125
>gi|217071576|gb|ACJ84148.1| unknown [Medicago truncatula]
Length = 163
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R+ L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + +
Sbjct: 5 PARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVD 130
+++GNK D+D
Sbjct: 121 VNKILVGNKADMD 133
>gi|119573630|gb|EAW53245.1| hCG1996054, isoform CRA_d [Homo sapiens]
gi|119573631|gb|EAW53246.1| hCG1996054, isoform CRA_d [Homo sapiens]
gi|119573632|gb|EAW53247.1| hCG1996054, isoform CRA_d [Homo sapiens]
Length = 166
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNKC 123
Query: 128 DVDG 131
D++
Sbjct: 124 DMEA 127
>gi|195387317|ref|XP_002052342.1| GJ22226 [Drosophila virilis]
gi|194148799|gb|EDW64497.1| GJ22226 [Drosophila virilis]
Length = 216
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ + ED + +IWDTAGQE
Sbjct: 29 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 88
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + SF W +E QASP N + GNK D
Sbjct: 89 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASP----NIVIALAGNKAD 144
Query: 129 VDGGNSRVVCFGE 141
+ N RVV F E
Sbjct: 145 LS--NIRVVEFDE 155
>gi|195052912|ref|XP_001993394.1| GH13785 [Drosophila grimshawi]
gi|193900453|gb|EDV99319.1| GH13785 [Drosophila grimshawi]
Length = 216
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ + ED + +IWDTAGQE
Sbjct: 29 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 88
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + SF W +E QASP N + GNK D
Sbjct: 89 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASP----NIVIALAGNKAD 144
Query: 129 VDGGNSRVVCFGE 141
+ N RVV F E
Sbjct: 145 LS--NIRVVEFDE 155
>gi|390604100|gb|EIN13491.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 257
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 80/128 (62%), Gaps = 4/128 (3%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P+ + +K+++LG++ VGK+S++ ++V+ F + TIGA FLT++ + EDR+ +I
Sbjct: 8 PADKSVQVKLVLLGEAAVGKSSVVLRFVSNDFQANKEPTIGAAFLTQKCRLEDRVLRYEI 67
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF SL +YR A V+VYDV S + +W +E QA+P N
Sbjct: 68 WDTAGQERFHSLAPMYYRNAQAAVVVYDVTKASSLEKAKSWVKELQRQANP----NIVIA 123
Query: 122 VLGNKIDV 129
+ GNK+D+
Sbjct: 124 LAGNKVDL 131
>gi|348675760|gb|EGZ15578.1| hypothetical protein PHYSODRAFT_354794 [Phytophthora sojae]
Length = 203
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + F+ Y TIG DF + V+ +++ LQIWDTAGQ
Sbjct: 8 LFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGAD ++VYDV S +SFD++N+W E AS +++GNK
Sbjct: 68 ERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEGTCK----LLVGNKS 123
Query: 128 DV 129
D+
Sbjct: 124 DI 125
>gi|195433707|ref|XP_002064849.1| GK14984 [Drosophila willistoni]
gi|194160934|gb|EDW75835.1| GK14984 [Drosophila willistoni]
Length = 220
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ + ED + +IWDTAGQE
Sbjct: 30 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 89
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + SF W +E QASP N + GNK D
Sbjct: 90 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASP----NIVIALAGNKAD 145
Query: 129 VDGGNSRVVCFGE 141
+ N RVV F E
Sbjct: 146 LS--NIRVVEFDE 156
>gi|194759664|ref|XP_001962067.1| GF15280 [Drosophila ananassae]
gi|190615764|gb|EDV31288.1| GF15280 [Drosophila ananassae]
Length = 219
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ + ED + +IWDTAGQE
Sbjct: 30 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 89
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + SF W +E QASP N + GNK D
Sbjct: 90 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASP----NIVIALAGNKAD 145
Query: 129 VDGGNSRVVCFGE 141
+ N RVV F E
Sbjct: 146 LS--NIRVVEFDE 156
>gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum]
Length = 216
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R+ L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + +
Sbjct: 5 PARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVD 130
+++GNK D+D
Sbjct: 121 VNKILVGNKADMD 133
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ F+ K+TIG +F T+ +Q E+++ QIWDTAGQ
Sbjct: 18 LFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVENKIIKAQIWDTAGQ 77
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV + +F+N+ W +E A N +++GNK
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADS----NIVVMLIGNKT 133
Query: 128 DV 129
D+
Sbjct: 134 DL 135
>gi|154333217|ref|XP_001562869.1| putative small GTP-binding protein Rab11 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059874|emb|CAM37302.1| putative small GTP-binding protein Rab11 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 208
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K++++GDSGVGK++LM +Y +FS + +TIG +F+TK ++ EDR +QIWDTAGQE
Sbjct: 8 FKIVLIGDSGVGKSNLMTRYTMSEFSQETPSTIGVEFMTKSIKIEDRDAKIQIWDTAGQE 67
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ + Y GA +LVYD+ + SFD++ W +E + P ++GNK D
Sbjct: 68 RFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFV----PVTCCIFLIGNKCD 123
Query: 129 VD 130
++
Sbjct: 124 LE 125
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ +Q E R QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +FDN++ W +E A N +++GNK
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADS----NIVIMLIGNKT 127
Query: 128 DV 129
D+
Sbjct: 128 DL 129
>gi|123454545|ref|XP_001315025.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|67944369|gb|AAY83820.1| small Rab GTPase RabC5 [Trichomonas vaginalis]
gi|121897689|gb|EAY02802.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 190
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 82/129 (63%), Gaps = 6/129 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LKV+I+G++ VGK+ +++++V F ATIGA FLTK + + LQ+WDTAGQE
Sbjct: 4 LKVVIVGETKVGKSCILSRFVQGSFDASMPATIGAAFLTKVITTSEGPMRLQLWDTAGQE 63
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
+F+SL +YR A+ VLVYDV S S ++L +W E +A P VV+GNKID
Sbjct: 64 KFRSLAPMYYRSANVAVLVYDVTSKSSLESLEDWSAEIADKAPP----GIKLVVIGNKID 119
Query: 129 VDGGNSRVV 137
++ + RV+
Sbjct: 120 ME--SERVI 126
>gi|358057822|dbj|GAA96324.1| hypothetical protein E5Q_02990 [Mixia osmundae IAM 14324]
Length = 326
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 6/129 (4%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF----EDRLFTLQIWDTA 65
KV+++G S GKTSL +QY + +F Y+AT+GADF++ +L +WDTA
Sbjct: 6 KVVLIGASSCGKTSLRDQYAHGRFHANYRATLGADFISINQPVAQAGSSTEVSLSVWDTA 65
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQAS--PSDPDNFPFVVL 123
GQERF+++ AFYRGAD VLV+ + S S +L W +EF+ + P + D F F+VL
Sbjct: 66 GQERFRAIASAFYRGADAVVLVFSLISRDSLLSLKFWLQEFIERCPVLPGESDRFTFLVL 125
Query: 124 GNKIDVDGG 132
GNK D++ G
Sbjct: 126 GNKADLEDG 134
>gi|281200877|gb|EFA75091.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLK++++GDSGVGK+ ++ ++ + +F++ Y +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 40 LLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKRIKLQIWDTAGQ 99
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYD+ SM+SF+++ W + ASPS +++GNK
Sbjct: 100 ERFKTITTSYYRGAHGLIIVYDITSMESFNSIKRWLIDVDRFASPS----VLKLIVGNKC 155
Query: 128 DVD 130
D++
Sbjct: 156 DLN 158
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK++L++++ FS K+TIG +F T+ ++ E + QIWDTAGQ
Sbjct: 18 LFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIEVEGKTIKAQIWDTAGQ 77
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +FDN+ W +E A N +++GNK+
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDHADS----NIVIMLIGNKM 133
Query: 128 DV 129
D+
Sbjct: 134 DL 135
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F+ + K+TIG +F TK +Q E + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQ 70
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD++ +F+N+ W +E A N +++GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEA----NIVVMLIGNKS 126
Query: 128 DV 129
D+
Sbjct: 127 DL 128
>gi|168049674|ref|XP_001777287.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671389|gb|EDQ57942.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 10/146 (6%)
Query: 1 MPSRRRT-----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR 55
M +R R L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ +++
Sbjct: 1 MATRARADNYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNK 60
Query: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS
Sbjct: 61 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS---- 116
Query: 116 DNFPFVVLGNKIDVDGGNSRVVCFGE 141
DN +++GNK D+D + R V F +
Sbjct: 117 DNVNKILVGNKADMD-PSKRAVPFAK 141
>gi|125985719|ref|XP_001356623.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|195147804|ref|XP_002014864.1| GL19400 [Drosophila persimilis]
gi|54644947|gb|EAL33687.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|194106817|gb|EDW28860.1| GL19400 [Drosophila persimilis]
Length = 218
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ + ED + +IWDTAGQE
Sbjct: 29 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 88
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + SF W +E QASP N + GNK D
Sbjct: 89 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASP----NIVIALAGNKAD 144
Query: 129 VDGGNSRVVCFGE 141
+ N RVV F E
Sbjct: 145 LS--NIRVVEFDE 155
>gi|387017940|gb|AFJ51088.1| ras-related protein Rab-5A-like [Crotalus adamanteus]
Length = 215
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTIKFEIWDTAGQE 80
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP----NIVIALAGNKAD 136
Query: 129 VDGGNSRVVCFGEEGS 144
+ N R V F E S
Sbjct: 137 L--ANKRAVDFQEAQS 150
>gi|112983262|ref|NP_001037614.1| small GTP binding protein RAB5 [Bombyx mori]
gi|99082892|gb|ABF66621.1| small GTP binding protein RAB5 [Bombyx mori]
Length = 213
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 84/140 (60%), Gaps = 6/140 (4%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P + K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ ++F+D +I
Sbjct: 16 PQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEI 75
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQER+ SL +YRGA ++VYD+ + +F NW +E QASPS
Sbjct: 76 WDTAGQERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPS----IVIA 131
Query: 122 VLGNKIDVDGGNSRVVCFGE 141
+ GNK D+ R+V F E
Sbjct: 132 LAGNKSDL--AAKRMVEFEE 149
>gi|410923859|ref|XP_003975399.1| PREDICTED: ras-related protein Rab-12-like [Takifugu rubripes]
Length = 242
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 12/136 (8%)
Query: 3 SRRRTL--------LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED 54
SRRR + L++II+G GVGKTSLM ++ + F K+T+G DF K V+
Sbjct: 29 SRRRKIPPRPADFKLQIIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG 88
Query: 55 RLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSD 114
+ LQIWDTAGQERF S+ A+YRGA VLVYD+ ++SFD+L W + AS
Sbjct: 89 KKIRLQIWDTAGQERFNSITSAYYRGAKGIVLVYDITKLESFDDLPKWMKMIDKYAS--- 145
Query: 115 PDNFPFVVLGNKIDVD 130
+ +++GNK+D +
Sbjct: 146 -EEAELLLVGNKLDCE 160
>gi|15238317|ref|NP_201304.1| RAB GTPase homolog H1A [Arabidopsis thaliana]
gi|75335533|sp|Q9LV79.1|RAH1A_ARATH RecName: Full=Ras-related protein RABH1a; Short=AtRABH1a
gi|8843763|dbj|BAA97311.1| GTP binding protein-like [Arabidopsis thaliana]
gi|332010596|gb|AED97979.1| RAB GTPase homolog H1A [Arabidopsis thaliana]
Length = 206
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 87/135 (64%), Gaps = 9/135 (6%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++ LGD GVGKTS++ ++ KF Y+ATIG DFL+K ++EDR F LQ+WDTAGQER
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQER 68
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL-GNKID 128
F+SL ++ R + V+VYDV S +SF N + W EE ++ ++ +VL GNK D
Sbjct: 69 FKSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEV-----RAERGSYVIIVLVGNKTD 123
Query: 129 VDGGNSRVVCFGEEG 143
+ N R V EEG
Sbjct: 124 L--VNKRQVSI-EEG 135
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ +Q E R QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +FDN++ W +E A N +++GNK
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADS----NIVIMLIGNKT 127
Query: 128 DV 129
D+
Sbjct: 128 DL 129
>gi|348509081|ref|XP_003442080.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 220
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 80/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +F NW +E QASP N + GNK D
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASP----NIVIAIAGNKAD 137
Query: 129 VDGGNSRVVCFGE 141
+ N R V F E
Sbjct: 138 L--ANKRAVDFQE 148
>gi|168033669|ref|XP_001769337.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679443|gb|EDQ65891.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 10/146 (6%)
Query: 1 MPSRRRT-----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR 55
M +R R L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ +++
Sbjct: 1 MATRARADNYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNK 60
Query: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDP 115
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS
Sbjct: 61 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS---- 116
Query: 116 DNFPFVVLGNKIDVDGGNSRVVCFGE 141
DN +++GNK D+D + R V F +
Sbjct: 117 DNVNKILVGNKADMD-PSKRAVPFAK 141
>gi|118381174|ref|XP_001023748.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|5738170|gb|AAD50282.1|AF169952_1 putative intermediate compartment protein [Tetrahymena thermophila]
gi|89305515|gb|EAS03503.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777888|dbj|BAJ21340.1| Rab-family small GTPase Rab2G [Tetrahymena thermophila]
Length = 207
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 85/134 (63%), Gaps = 6/134 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K II+GDS VGK++++ Q++ KF ++ TIG +F +K +Q + + LQ+WDTAGQ
Sbjct: 6 LFKYIIIGDSSVGKSAILLQFMEGKFKAEHDTTIGVEFGSKIIQVKGKNVKLQVWDTAGQ 65
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
E F+S+ ++YRG+ C LVYDV + +SF N+ W EE A+ D V++GNKI
Sbjct: 66 ESFKSITRSYYRGSICAFLVYDVTNRESFTNIQKWLEETQNYAN----DKITLVLVGNKI 121
Query: 128 DVDGGNSRVVCFGE 141
D+ N R V + E
Sbjct: 122 DL--ANKRQVSYDE 133
>gi|443896803|dbj|GAC74146.1| ras-related GTPase [Pseudozyma antarctica T-34]
Length = 693
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 60/146 (41%), Positives = 87/146 (59%), Gaps = 12/146 (8%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-----DRL 56
P + +KV+++GD G GKTS+ N+++ F Y+ATIGADF+TK + +
Sbjct: 63 PIAPKRAIKVVLIGDGGCGKTSMRNRFLTNSFFPSYRATIGADFITKTLPIDAANPDGEK 122
Query: 57 FTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDV--NSMKSFDNLNNWREEFLIQ----A 110
TLQIWDTAGQERFQSLG AFYRGAD ++ D + ++ + W E F+ + A
Sbjct: 123 ATLQIWDTAGQERFQSLGSAFYRGADAVIIALDATKDPDETMQRVKAWYEAFMDKAPGPA 182
Query: 111 SPSDPDNFPFVVLGNKID-VDGGNSR 135
S ++ F ++ NK+D VDG +R
Sbjct: 183 SEAERKRFCWICAANKVDLVDGQATR 208
>gi|37681919|gb|AAQ97837.1| RAB22A, member RAS oncogene family [Danio rerio]
Length = 196
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LKV +LGD+GVGK+S++ ++V F TIGA F+TK VQ+++ L IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF++L +YRG+ ++VYD+ +SF L NW +E P N + GNK D
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPP----NIVVAIAGNKCD 121
Query: 129 V 129
+
Sbjct: 122 L 122
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 82/131 (62%), Gaps = 4/131 (3%)
Query: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M + L K++++GDSGVGKT L+ ++ F++ Y +TIG DF K ++ + + LQ
Sbjct: 1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVSR 116
Query: 121 VVLGNKIDVDG 131
++LGNK D++
Sbjct: 117 MLLGNKCDIEA 127
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ +Q + ++ QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E P N +++GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDP----NIVVMLVGNKS 129
Query: 128 DV 129
D+
Sbjct: 130 DL 131
>gi|56118785|ref|NP_991282.2| ras-related protein Rab-22A [Danio rerio]
gi|55250250|gb|AAH85393.1| RAB22A, member RAS oncogene family [Danio rerio]
gi|182889502|gb|AAI65262.1| Rab22a protein [Danio rerio]
Length = 196
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LKV +LGD+GVGK+S++ ++V F TIGA F+TK VQ+++ L IWDTAGQE
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF++L +YRG+ ++VYD+ +SF L NW +E P N + GNK D
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPP----NIVVAIAGNKCD 121
Query: 129 V 129
+
Sbjct: 122 L 122
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ +Q + ++ QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E P N +++GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDP----NIVVMLVGNKS 129
Query: 128 DV 129
D+
Sbjct: 130 DL 131
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ FS K+TIG +F TK +Q E + QIWDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +SFDN++ W E A S +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSS----IVIMMVGNKS 127
Query: 128 DV 129
D+
Sbjct: 128 DL 129
>gi|18447921|dbj|BAB84326.1| ras-related protein RAB8-5 [Nicotiana tabacum]
Length = 216
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 84/133 (63%), Gaps = 8/133 (6%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + +
Sbjct: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDSKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVD 130
+++GNK D+D
Sbjct: 121 VNKILVGNKADMD 133
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 87/137 (63%), Gaps = 6/137 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ + E ++ QIWDTAGQ
Sbjct: 19 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 78
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA VLVYDV +F+N++ W +E A N +++GNK
Sbjct: 79 ERYRAITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADA----NIRIMLVGNKT 134
Query: 128 DVDGGNSRVVCFGEEGS 144
D+ + R V + GS
Sbjct: 135 DLK--HLRAVTTDDAGS 149
>gi|403215515|emb|CCK70014.1| hypothetical protein KNAG_0D02650 [Kazachstania naganishii CBS
8797]
Length = 211
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 89/140 (63%), Gaps = 8/140 (5%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
+++KV+++GDSGVGK+ L+ ++V KFS + TIG DF K V + LQ+WDTAG
Sbjct: 13 SIMKVLLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDINGKKIKLQLWDTAG 72
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QERF+++ A+YRGA +LVYDV ++F+N+ NW S D+ +++GNK
Sbjct: 73 QERFRTITTAYYRGAMGIILVYDVTDERTFENVKNW----FKTVSDHATDDAQLLLVGNK 128
Query: 127 IDVDGGNSRVVCFGEEGSSM 146
D+D +R+V E+G ++
Sbjct: 129 CDMD---TRLVTH-EQGEAL 144
>gi|149634147|ref|XP_001508982.1| PREDICTED: ras-related protein Rab-5A-like [Ornithorhynchus
anatinus]
Length = 215
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP----NIVIALAGNKAD 136
Query: 129 VDGGNSRVVCFGEEGS 144
+ N R V F E S
Sbjct: 137 L--ANKRAVDFQEAQS 150
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ +Q + ++ QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E P N +++GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDP----NIVVMLVGNKS 129
Query: 128 DV 129
D+
Sbjct: 130 DL 131
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ +Q + ++ QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E P N +++GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDP----NIVVMLVGNKS 129
Query: 128 DV 129
D+
Sbjct: 130 DL 131
>gi|410912320|ref|XP_003969638.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
gi|410930031|ref|XP_003978402.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 205
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 82/123 (66%), Gaps = 4/123 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGKT L+ ++ F+ + +TIG DF + V+ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD+ + KSFDN+ NW AS SD + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWMRNIEEHAS-SDVER---MLLGNKC 123
Query: 128 DVD 130
D+D
Sbjct: 124 DMD 126
>gi|402586726|gb|EJW80663.1| Rab5 protein, partial [Wuchereria bancrofti]
Length = 146
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 6/131 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQESFAKAKNWVKELQRQASP----NIVIALSGNKAD 136
Query: 129 VDGGNSRVVCF 139
+ N RVV +
Sbjct: 137 L--ANKRVVEY 145
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ +Q + ++ QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E P N +++GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDP----NIVVMLVGNKS 129
Query: 128 DV 129
D+
Sbjct: 130 DL 131
>gi|623586|gb|AAA74117.1| putative [Nicotiana tabacum]
Length = 208
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 78/120 (65%), Gaps = 4/120 (3%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K++ LGD VGKTS++ +++ KF N Y+ATIG DFL+K + EDR LQ+WDTAGQER
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVALQLWDTAGQER 70
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F+SL ++ R + V+VYDV S +SF N + W EE + + V++GNK D+
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERG----SDVIIVLVGNKTDL 126
>gi|388579646|gb|EIM19967.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 231
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 85/131 (64%), Gaps = 4/131 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S++ +K+++LG++ VGK+S++ ++V F + TIGA FLT++ + ED++ +IW
Sbjct: 4 SQKPVQVKLVLLGEAAVGKSSVVLRFVQNDFQEYKEPTIGAAFLTQKCRLEDKVIKFEIW 63
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF+SL +YR A V+VYD+ S SF+ +W +E QASP N +
Sbjct: 64 DTAGQERFRSLAPMYYRNALSAVVVYDITSSSSFEKAKSWVKELQRQASP----NVIIAL 119
Query: 123 LGNKIDVDGGN 133
+GNK+D+ G+
Sbjct: 120 VGNKLDLVEGS 130
>gi|403414221|emb|CCM00921.1| predicted protein [Fibroporia radiculosa]
Length = 275
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 79/127 (62%), Gaps = 4/127 (3%)
Query: 3 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
+ R +K+++LG++ VGK+S++ ++V+ +F + TIGA FLT++ + EDR+ +IW
Sbjct: 9 TERSVQVKLVLLGEAAVGKSSVVLRFVSNEFQANKEPTIGAAFLTQKCRLEDRVLRYEIW 68
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVV 122
DTAGQERF SL +YR A V+VYDV S + W +E QA+P N +
Sbjct: 69 DTAGQERFHSLAPMYYRNAQAAVVVYDVTKASSLEKAKTWVKELQRQANP----NIVIAL 124
Query: 123 LGNKIDV 129
GNK+D+
Sbjct: 125 AGNKVDL 131
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F+ + K+TIG +F TK +Q E + QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD++ +F+N+ W +E A N +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEA----NIVVMLVGNKS 127
Query: 128 DV 129
D+
Sbjct: 128 DL 129
>gi|12083645|ref|NP_073183.1| ras-related protein Rab-5A [Rattus norvegicus]
gi|3309068|gb|AAC26004.1| small GTP-binding protein rab5 [Rattus norvegicus]
gi|149027113|gb|EDL82849.1| RAB5A, member RAS oncogene family [Rattus norvegicus]
gi|171847366|gb|AAI61848.1| Rab5a protein [Rattus norvegicus]
Length = 215
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASP----NIVIALSGNKAD 136
Query: 129 VDGGNSRVVCFGEEGS 144
+ N R V F E S
Sbjct: 137 L--ANKRAVDFQEAQS 150
>gi|392333087|ref|XP_003752788.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
gi|392353206|ref|XP_003751425.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
Length = 215
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASP----NIVIALSGNKAD 136
Query: 129 VDGGNSRVVCFGEEGS 144
+ N R V F E S
Sbjct: 137 L--ANKRAVDFQEAQS 150
>gi|449281648|gb|EMC88684.1| Ras-related protein Rab-5A [Columba livia]
Length = 215
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP----NIVIALAGNKAD 136
Query: 129 VDGGNSRVVCFGE 141
+ N R V F E
Sbjct: 137 L--ANKRAVDFQE 147
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ FS K+TIG +F TK +Q E + QIWDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +SF+N+N W E A S +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADSS----IVIMMVGNKS 127
Query: 128 DV 129
D+
Sbjct: 128 DL 129
>gi|395540249|ref|XP_003772070.1| PREDICTED: ras-related protein Rab-5A [Sarcophilus harrisii]
Length = 215
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP----NIVIALAGNKAD 136
Query: 129 VDGGNSRVVCFGEEGS 144
+ N R V F E S
Sbjct: 137 L--ANKRAVDFQEAQS 150
>gi|391337022|ref|XP_003742873.1| PREDICTED: ras and EF-hand domain-containing protein homolog
[Metaseiulus occidentalis]
Length = 571
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 82/139 (58%), Gaps = 8/139 (5%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P R L KV+I+GDS VGK+SL+N++ +F + ATIG DF K V E R LQ+
Sbjct: 382 PER---LFKVVIVGDSAVGKSSLINRFCQGQFVPSFNATIGVDFRVKSVTVEGRPVALQL 438
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF+S+ ++R AD ++VYDV S +SF N+ W + D +
Sbjct: 439 WDTAGQERFRSITKQYFRKADGVIIVYDVTSEESFKNVRAW----VSALQDGVTDEIALM 494
Query: 122 VLGNKIDVDGGNSRVVCFG 140
++GNK D+D R+V F
Sbjct: 495 IVGNKADMDTA-LRMVSFS 512
>gi|302681681|ref|XP_003030522.1| hypothetical protein SCHCODRAFT_16443 [Schizophyllum commune H4-8]
gi|300104213|gb|EFI95619.1| hypothetical protein SCHCODRAFT_16443 [Schizophyllum commune H4-8]
Length = 246
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L+K II+G++G GK+ L++Q+ + F + TIG +F ++ V+ ++ LQ+WDTAGQ
Sbjct: 20 LMKYIIIGEAGTGKSCLLHQFTHNSFKEHSQHTIGVEFSSRTVKLGEKRIKLQLWDTAGQ 79
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+S+ ++YRGA C +LVYD+ + SF NL+ W + ASP + V++GNK
Sbjct: 80 ERFRSVTRSYYRGAACAILVYDITNRDSFVNLSRWLADARALASP----DLVVVLVGNKA 135
Query: 128 D 128
D
Sbjct: 136 D 136
>gi|157117562|ref|XP_001658827.1| ras-related protein, putative [Aedes aegypti]
gi|108875998|gb|EAT40223.1| AAEL008029-PA [Aedes aegypti]
Length = 231
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
Query: 6 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTA 65
+ KV+I+GDSGVGK+SL+ +Y + KF +++ TIG DF + ++ D LQIWDTA
Sbjct: 29 HNMFKVLIIGDSGVGKSSLLLRYADNKFPLKHQITIGVDFKIRTIKINDEHIKLQIWDTA 88
Query: 66 GQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGN 125
GQERF+ + ++YRGA +LVYDV SMKSF ++ W +E + + + ++GN
Sbjct: 89 GQERFRLITNSYYRGAHGVILVYDVTSMKSFQHVKRWLKEIQVNCTTGEVCKL---LVGN 145
Query: 126 KID 128
K D
Sbjct: 146 KND 148
>gi|55670041|pdb|1TU4|A Chain A, Crystal Structure Of Rab5-Gdp Complex
gi|55670042|pdb|1TU4|B Chain B, Crystal Structure Of Rab5-Gdp Complex
gi|55670043|pdb|1TU4|C Chain C, Crystal Structure Of Rab5-Gdp Complex
gi|55670044|pdb|1TU4|D Chain D, Crystal Structure Of Rab5-Gdp Complex
Length = 171
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 8 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 67
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D
Sbjct: 68 RYHSLAPXYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP----NIVIALSGNKAD 123
Query: 129 VDGGNSRVVCFGEEGS 144
+ N R V F E S
Sbjct: 124 L--ANKRAVDFQEAQS 137
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 83/122 (68%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F+ K+TIG +F T+ +Q + + QIWDTAGQ
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD++ +++DN+N W +E A N +++GNK
Sbjct: 69 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADS----NIVIMLVGNKS 124
Query: 128 DV 129
D+
Sbjct: 125 DL 126
>gi|410077757|ref|XP_003956460.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS 2517]
gi|372463044|emb|CCF57325.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS 2517]
Length = 210
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 86/131 (65%), Gaps = 7/131 (5%)
Query: 7 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
+++K++++GDSGVGK+ L+ ++V KFS + TIG DF K V+ + LQ+WDTAG
Sbjct: 15 SIMKILLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVEINGKKIKLQLWDTAG 74
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNK 126
QERF+++ A+YRGA +LVYDV K+F N+N W + A+ D+ +++GNK
Sbjct: 75 QERFRTITTAYYRGAMGIILVYDVTDEKTFANINKWFKTVTEHAN----DDAQLLLVGNK 130
Query: 127 IDVDGGNSRVV 137
D+D +RVV
Sbjct: 131 NDMD---TRVV 138
>gi|256071955|ref|XP_002572303.1| rab-18 [Schistosoma mansoni]
gi|353229802|emb|CCD75973.1| putative rab-18 [Schistosoma mansoni]
Length = 211
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQIWDTAGQ 67
K++++GDSGVGK+SL+ +Y N F +Q ATIG DF K V D L IWDTAGQ
Sbjct: 12 FKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKHVTVPDGTKIKLSIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF++L YRG+ V V+DV++ +SFD+LN+W EE ++ +PD +V GNKI
Sbjct: 72 ERFRTLTPNVYRGSHAAVFVFDVSNRESFDHLNSWMEE--LKTYSDNPDMIKLLV-GNKI 128
Query: 128 D 128
D
Sbjct: 129 D 129
>gi|66825345|ref|XP_646027.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74834150|sp|O76173.1|RAB1C_DICDI RecName: Full=Ras-related protein Rab-1C
gi|3273209|dbj|BAA31150.1| Rab1C [Dictyostelium discoideum]
gi|60474000|gb|EAL71937.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 85/123 (69%), Gaps = 4/123 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLK++++GDSGVGK+ ++ ++ + +F++ Y +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 33 LLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQ 92
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYD+ SM SF+++ W + ASPS +++GNK
Sbjct: 93 ERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPS----VLKLIVGNKC 148
Query: 128 DVD 130
D++
Sbjct: 149 DLN 151
>gi|57530730|ref|NP_001006363.1| ras-related protein Rab-5A [Gallus gallus]
gi|53135109|emb|CAG32396.1| hypothetical protein RCJMB04_24h4 [Gallus gallus]
Length = 215
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP----NIVIALAGNKAD 136
Query: 129 VDGGNSRVVCFGE 141
+ N R V F E
Sbjct: 137 L--ANKRAVDFQE 147
>gi|344230383|gb|EGV62268.1| hypothetical protein CANTEDRAFT_131641 [Candida tenuis ATCC 10573]
Length = 242
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 79/145 (54%), Gaps = 28/145 (19%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFT---------- 58
KV++LGDSGVGKT + +Q+V+ F+N YKATIG D+LT V R+ T
Sbjct: 8 FKVVLLGDSGVGKTCIRSQFVHHIFTNAYKATIGGDYLTSTVMVTRRVTTDDAGSNHDTN 67
Query: 59 ---------------LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWR 103
LQIWDTAGQERF S+ AFYRG D VLVYD+ + +S NL W
Sbjct: 68 DIPQPQTIQKPIKTHLQIWDTAGQERFNSISRAFYRGTDIVVLVYDITNYESLLNLKTWF 127
Query: 104 EEFLIQASPSDPDNFPFVVLGNKID 128
+ F+ P +V+GNK D
Sbjct: 128 KNFMDHCQVPHPG---VIVVGNKSD 149
>gi|170031849|ref|XP_001843796.1| rab5 [Culex quinquefasciatus]
gi|167871195|gb|EDS34578.1| rab5 [Culex quinquefasciatus]
Length = 215
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 26 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCIDDTTVKFEIWDTAGQE 85
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + SF W +E QASP N + GNK D
Sbjct: 86 RYHSLAPMYYRGAQAAIVVYDIQNQDSFARAKTWVKELQRQASP----NIVIALAGNKAD 141
Query: 129 VDGGNSRVVCFGE 141
+ NSRVV + E
Sbjct: 142 L--ANSRVVDYEE 152
>gi|72392927|ref|XP_847264.1| small GTP-binding protein Rab11 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|7939615|gb|AAF70820.1|AF152531_1 small GTPase Rab11 [Trypanosoma brucei]
gi|11611729|gb|AAG39034.1|AF234188_1 RAB11A GTPase [Trypanosoma brucei]
gi|62176098|gb|AAX70217.1| small GTP-binding protein Rab11 [Trypanosoma brucei]
gi|70803294|gb|AAZ13198.1| small GTP-binding protein Rab11 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 216
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 4/122 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
KV+I+GDSGVGK++LM +Y +FS ATIG +F+TK ++ E R +QIWDTAGQE
Sbjct: 8 FKVVIVGDSGVGKSNLMTRYTADEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQE 67
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF+++ + Y GA +LVYD+ + SFD+++ W +E P ++GNK D
Sbjct: 68 RFRAISRSIYHGAKGAMLVYDITNQTSFDSISTWLQELRAFV----PATCSIFLIGNKCD 123
Query: 129 VD 130
++
Sbjct: 124 LE 125
>gi|343426796|emb|CBQ70324.1| probable VPS21-Rab5-like GTPase involved in vacuolar protein
sorting [Sporisorium reilianum SRZ2]
Length = 268
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 76/120 (63%), Gaps = 4/120 (3%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQER 69
K+++LG++ VGK+S++ ++V F + TIGA FLT++ + EDRL +IWDTAGQER
Sbjct: 26 KLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGAAFLTQKCRLEDRLIKFEIWDTAGQER 85
Query: 70 FQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 129
F SL +YR A ++YDV SF+ +W +E QA+P N ++GNKID+
Sbjct: 86 FHSLAPMYYRNAQASAVIYDVTKASSFEKAKSWVKELQRQANP----NIVIALVGNKIDL 141
>gi|289743331|gb|ADD20413.1| Rab protein 5 [Glossina morsitans morsitans]
Length = 222
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ + ED + +IWDTAGQE
Sbjct: 32 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 91
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + SF W +E QASP N + GNK D
Sbjct: 92 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRATTWVKELHKQASP----NIVIALAGNKAD 147
Query: 129 VDGGNSRVVCFGE 141
+ N RVV + E
Sbjct: 148 LS--NIRVVEYEE 158
>gi|294885227|ref|XP_002771233.1| Rab1 protein, putative [Perkinsus marinus ATCC 50983]
gi|239874713|gb|EER03049.1| Rab1 protein, putative [Perkinsus marinus ATCC 50983]
Length = 214
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 84/131 (64%), Gaps = 6/131 (4%)
Query: 1 MPSRRR--TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFT 58
MPS R L K++++GDSGVGK+ L+ ++ + F+ Y TIG DF + + D+
Sbjct: 1 MPSNRDYDHLFKLVLIGDSGVGKSCLLLRFADDSFTESYITTIGVDFRFRTIPVSDKTVK 60
Query: 59 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNF 118
LQIWDTAGQERF+++ A+YRGAD ++VYD +SF+N++NW E A+ D+
Sbjct: 61 LQIWDTAGQERFRTITSAYYRGADGIMMVYDCTHRESFENIDNWLSEVNRYAN----DST 116
Query: 119 PFVVLGNKIDV 129
+++GNK D+
Sbjct: 117 VKILIGNKSDL 127
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++ + +FS + K+TIG +F T+ + +D++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+N+ W +E P N +++GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDP----NIVVMLVGNKS 128
Query: 128 DV 129
D+
Sbjct: 129 DL 130
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 83/122 (68%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F+ K+TIG +F T+ +Q + + QIWDTAGQ
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYD++ +++DN+N W +E A N +++GNK
Sbjct: 69 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADS----NIVIMLVGNKS 124
Query: 128 DV 129
D+
Sbjct: 125 DL 126
>gi|224045361|ref|XP_002196933.1| PREDICTED: ras-related protein Rab-5A [Taeniopygia guttata]
Length = 215
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP----NIVIALAGNKAD 136
Query: 129 VDGGNSRVVCFGE 141
+ N R V F E
Sbjct: 137 L--ANKRAVDFQE 147
>gi|156839424|ref|XP_001643403.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156114012|gb|EDO15545.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 82/128 (64%), Gaps = 3/128 (2%)
Query: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
P++ T K++ LG+ GVGKTSL+ +++ F + Y+ATIG DFL+K + +D+ LQ+
Sbjct: 4 PNKSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQL 63
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
WDTAGQERF+SL ++ R + ++VYD+ KSFD ++ W E+ + DN
Sbjct: 64 WDTAGQERFRSLIPSYIRDSRVAIVVYDITKKKSFDCIDKWIEDV---KNERGEDNVILC 120
Query: 122 VLGNKIDV 129
V+GNK D+
Sbjct: 121 VVGNKSDL 128
>gi|118375516|ref|XP_001020942.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89302709|gb|EAS00697.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777796|dbj|BAJ21294.1| Rab-family small GTPase Rab5B [Tetrahymena thermophila]
Length = 197
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 76/121 (62%), Gaps = 4/121 (3%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
+KV+ILGD+GVGKTS++N++ NK F + T+GA F+ K + D+ + QIWDTAGQE
Sbjct: 7 IKVVILGDAGVGKTSILNRFSNKGFDENSQTTLGASFIPKVLTRGDKTYKFQIWDTAGQE 66
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
+++SL +YR ++VYD+ + SFD L W +E P N V+GNK+D
Sbjct: 67 KYRSLAPLYYRDTHAALIVYDITNRASFDVLKKWVQEL----REHGPANITIAVVGNKVD 122
Query: 129 V 129
+
Sbjct: 123 L 123
>gi|70906329|gb|AAZ14933.1| putative GTPase [Coprinellus disseminatus]
Length = 139
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 63/91 (69%)
Query: 46 LTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 105
+ KEV + + T IWD++GQERFQ+LG AFYRG++CCVLV+DV S KSF+ L WR+
Sbjct: 1 MVKEVDVDGQTVTFMIWDSSGQERFQTLGTAFYRGSECCVLVFDVTSSKSFEALGRWRDN 60
Query: 106 FLIQASPSDPDNFPFVVLGNKIDVDGGNSRV 136
F A DP+ FP VVLGNK+D D G V
Sbjct: 61 FFENAHVRDPEGFPVVVLGNKVDEDLGKREV 91
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ ++ E R+ QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV SF+N+ W +E A N +++GNK
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADA----NIVIMLIGNKT 127
Query: 128 DV 129
D+
Sbjct: 128 DL 129
>gi|357111103|ref|XP_003557354.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 84/133 (63%), Gaps = 8/133 (6%)
Query: 2 PSRRRT----LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLF 57
P+R R L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + V+ + +
Sbjct: 5 PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTASFITTIGIDFKIRTVELDGKRI 64
Query: 58 TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 117
LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS DN
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DN 120
Query: 118 FPFVVLGNKIDVD 130
+++GNK D+D
Sbjct: 121 VNKILVGNKADMD 133
>gi|330799117|ref|XP_003287594.1| Rab GTPase [Dictyostelium purpureum]
gi|325082380|gb|EGC35863.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 84/122 (68%), Gaps = 4/122 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
LLK++++GDSGVGK+ ++ ++ + +F++ Y +TIG DF + ++ + + LQIWDTAGQ
Sbjct: 33 LLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQ 92
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKI 127
ERF+++ ++YRGA ++VYD+ SM SF+++ W + ASPS +++GNK
Sbjct: 93 ERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPS----VLKLIVGNKC 148
Query: 128 DV 129
D+
Sbjct: 149 DL 150
>gi|449704465|gb|EMD44701.1| small GTPase EhRabD2, putative [Entamoeba histolytica KU27]
Length = 259
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 87/129 (67%), Gaps = 8/129 (6%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
+KVI++G+S VGKT MN+YV+ +F+ Q KATIG +KEV+ E + LQIWDTAGQE
Sbjct: 73 VKVIMVGESSVGKTCCMNRYVSNEFAEQTKATIGVGVGSKEVEVEGKHIKLQIWDTAGQE 132
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF +L ++R A ++++DV++ +SF+N+ NW E Q SD + F+ GNKID
Sbjct: 133 RFATLTGNYFRNAMAAIIMFDVSNKESFENIPNWVE----QCCKSDGKHIIFIA-GNKID 187
Query: 129 VDGGNSRVV 137
++ +RVV
Sbjct: 188 LE---NRVV 193
>gi|27066008|pdb|1N6H|A Chain A, Crystal Structure Of Human Rab5a
gi|40889551|pdb|1R2Q|A Chain A, Crystal Structure Of Human Rab5a Gtpase Domain At 1.05 A
Resolution
Length = 170
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQE
Sbjct: 7 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 66
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
R+ SL +YRGA ++VYD+ + +SF NW +E QASP N + GNK D
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP----NIVIALSGNKAD 122
Query: 129 VDGGNSRVVCFGEEGS 144
+ N R V F E S
Sbjct: 123 L--ANKRAVDFQEAQS 136
>gi|183232413|ref|XP_655208.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169802057|gb|EAL49821.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 264
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 87/129 (67%), Gaps = 8/129 (6%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
+KVI++G+S VGKT MN+YV+ +F+ Q KATIG +KEV+ E + LQIWDTAGQE
Sbjct: 78 VKVIMVGESSVGKTCCMNRYVSNEFAEQTKATIGVGVGSKEVEVEGKHIKLQIWDTAGQE 137
Query: 69 RFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKID 128
RF +L ++R A ++++DV++ +SF+N+ NW E Q SD + F+ GNKID
Sbjct: 138 RFATLTGNYFRNAMAAIIMFDVSNKESFENIPNWVE----QCCKSDGKHIIFIA-GNKID 192
Query: 129 VDGGNSRVV 137
++ +RVV
Sbjct: 193 LE---NRVV 198
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,414,137,538
Number of Sequences: 23463169
Number of extensions: 94999423
Number of successful extensions: 482792
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16179
Number of HSP's successfully gapped in prelim test: 8420
Number of HSP's that attempted gapping in prelim test: 451848
Number of HSP's gapped (non-prelim): 25434
length of query: 156
length of database: 8,064,228,071
effective HSP length: 118
effective length of query: 38
effective length of database: 9,590,541,425
effective search space: 364440574150
effective search space used: 364440574150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)