BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031599
(156 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O74978|YQL5_SCHPO Uncharacterized RNA-binding protein C1827.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1827.05c PE=4 SV=1
Length = 276
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 74/100 (74%)
Query: 41 RKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFI 100
+K++E K L K VLY+GR+PHGFYEK+M+ +FSQFG + RLR++RN+KTG SKH+ FI
Sbjct: 92 KKVSENKNLQKKKGVLYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFI 151
Query: 101 EFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLL 140
EF +VA VVA+ MH YLL+ +LQ +IP + VH +
Sbjct: 152 EFESLDVANVVAETMHNYLLYGKLLQCKVIPEDQVHENMF 191
>sp|Q6GL69|MK67I_XENTR MKI67 FHA domain-interacting nucleolar phosphoprotein-like
OS=Xenopus tropicalis GN=mki67ipl PE=2 SV=1
Length = 276
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 62/86 (72%)
Query: 55 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADA 114
V+YIG IP YE +++ +FSQFG + RLR++R+KKTG SK + ++EF EVA++VAD
Sbjct: 42 VIYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADT 101
Query: 115 MHGYLLFEHILQVHLIPPEHVHPKLL 140
M+ YL E +L+ +PPE VHP+L
Sbjct: 102 MNNYLFCERLLKCEFVPPEKVHPRLF 127
>sp|Q8JIY8|MK67I_DANRE MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio
rerio GN=mki67ip PE=2 SV=2
Length = 269
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 66/86 (76%)
Query: 55 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADA 114
VLY+G +P G +E +++++F QFG + RLR++R+KKTG SK +GF+EF EVA++VA+
Sbjct: 46 VLYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAET 105
Query: 115 MHGYLLFEHILQVHLIPPEHVHPKLL 140
M+ YL+ E I++ H+IPPE VH KL
Sbjct: 106 MNNYLMGERIIKCHVIPPEKVHEKLF 131
>sp|P53927|NOP15_YEAST Ribosome biogenesis protein 15 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOP15 PE=1 SV=1
Length = 220
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 70/98 (71%)
Query: 34 PLEGGPGRKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQ 93
P + +K ++K L + ++Y+ R+PHGF+EKE+ +F+QFG +K +R+ARNKKTG
Sbjct: 71 PKKQANEKKSKDKKTLEEYSGIIYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGN 130
Query: 94 SKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIP 131
S+H+GF+EF + E A + ++M+ YLL H+LQV ++P
Sbjct: 131 SRHYGFLEFVNKEDAMIAQESMNNYLLMGHLLQVRVLP 168
>sp|Q3SZM1|MK67I_BOVIN MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus
GN=MKI67IP PE=2 SV=1
Length = 296
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 62/86 (72%)
Query: 55 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADA 114
V+Y+G +P YE +++A+FSQFG + R R++R+KKTG SK +GF+EF +VA++ A+
Sbjct: 46 VIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGFVEFESEDVAKIAAET 105
Query: 115 MHGYLLFEHILQVHLIPPEHVHPKLL 140
M+ YL E +L+ H IPPE VH +L
Sbjct: 106 MNNYLFGERLLKCHFIPPEKVHEELF 131
>sp|Q7SYS2|MK67I_XENLA MKI67 FHA domain-interacting nucleolar phosphoprotein-like
OS=Xenopus laevis GN=mki67ipl PE=2 SV=2
Length = 278
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 60/86 (69%)
Query: 55 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADA 114
V+YIG IP E ++Q +F+QFG + RLR++R+KKTG SK + ++E+ EVA++VAD
Sbjct: 42 VIYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIVADT 101
Query: 115 MHGYLLFEHILQVHLIPPEHVHPKLL 140
M+ YL E +L+ + PE VHP+L
Sbjct: 102 MNNYLFCERLLKCEFVTPEKVHPRLF 127
>sp|Q9BYG3|MK67I_HUMAN MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Homo
sapiens GN=MKI67IP PE=1 SV=1
Length = 293
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 60/86 (69%)
Query: 55 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADA 114
V+Y+ +P+ E ++ ++FSQFG + R R++R+K+TG SK + F+EF +VA++VA+
Sbjct: 46 VVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAET 105
Query: 115 MHGYLLFEHILQVHLIPPEHVHPKLL 140
M+ YL E +L+ H +PPE VH +L
Sbjct: 106 MNNYLFGERLLECHFMPPEKVHKELF 131
>sp|Q5RJM0|MK67I_RAT MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Rattus
norvegicus GN=Mki67ip PE=2 SV=1
Length = 271
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 55 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADA 114
V+Y+G +P E + + +QFG I+R R++R+K+TG S+ F F+EF +VA++VA+
Sbjct: 45 VVYLGHLPSTLSESHIYDYCAQFGDIRRFRLSRSKRTGNSRGFAFVEFESEDVAKIVAET 104
Query: 115 MHGYLLFEHILQVHLIPPEHVHPKLL 140
M YL E +L +P E VH L
Sbjct: 105 MDNYLFGERLLSCKFMPREKVHKDLF 130
>sp|Q91VE6|MK67I_MOUSE MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Mus
musculus GN=Mki67ip PE=2 SV=1
Length = 317
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 55 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADA 114
V+Y+G +P E + + +QFG I R R++R+K+TG SK + F+EF +VA++VA+
Sbjct: 48 VVYLGHLPSTLSESHIYNYCAQFGDISRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAET 107
Query: 115 MHGYLLFEHILQVHLIPPEHVHPKLL 140
M YL E +L +P + VH L
Sbjct: 108 MDNYLFGERLLSCKFMPRKKVHKDLF 133
>sp|P78795|EIF3G_SCHPO Eukaryotic translation initiation factor 3 subunit G
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif35 PE=1 SV=2
Length = 282
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 35 LEGGPGRKLTEE--KPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTG 92
L G GR+ + K + + L + + E+E++ F +FG I+R+ +A++K+TG
Sbjct: 181 LRAGSGRESGDSMFKRERDDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETG 240
Query: 93 QSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPP 132
++K F F+ + D + A D + GY IL+ P
Sbjct: 241 RAKGFAFVSYYDRDCAIKARDRLDGYGWNNLILRCEFSKP 280
>sp|Q9LEB3|RBP47_NICPL Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia
GN=RBP47 PE=1 SV=1
Length = 428
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 55 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADA 114
++IG + E + + FSQ G + ++I RNK+TGQS+ +GF+EFN AE V +
Sbjct: 85 TIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQS 144
Query: 115 MHGYLL 120
+G ++
Sbjct: 145 YNGTMM 150
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 73 FFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPP 132
F S++ ++K ++ + TG SK +GF+ F D M+G +++ + P
Sbjct: 197 FASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATP 256
Query: 133 E 133
+
Sbjct: 257 K 257
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/76 (19%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
T +++G + ++E++ F+QFG + ++I K GF++F+D A+
Sbjct: 295 TTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGC------GFVQFSDRSSAQEAIQ 348
Query: 114 AMHGYLLFEHILQVHL 129
+ G ++ + +++
Sbjct: 349 KLSGAIIGKQAVRLSW 364
>sp|A0JM51|CELF5_XENTR CUGBP Elav-like family member 5 OS=Xenopus tropicalis GN=celf5 PE=2
SV=1
Length = 486
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L+I +P F + E+ F FG I ++ ++ T QSK FGF+ F++P A+ AM
Sbjct: 403 LFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAM 462
Query: 116 HGYLLFEHILQVHLIPPEHV 135
+G+ + L+V L P+
Sbjct: 463 NGFQIGMKRLKVQLKRPKDT 482
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L++G+IP EK+++ F QFG I L + +++ TG K F+ + + A A+
Sbjct: 49 LFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTAL 108
Query: 116 H 116
H
Sbjct: 109 H 109
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L++G + E+E+ + F FG+I+ + R G SK F++F+ A+ A+
Sbjct: 137 LFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGPD-GSSKGCAFVKFSSHAEAQAAIQAL 195
Query: 116 HG 117
HG
Sbjct: 196 HG 197
>sp|Q00916|RU17_YEAST U1 small nuclear ribonucleoprotein 70 kDa homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SNP1 PE=1
SV=1
Length = 300
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 55 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDP 105
++IGR+P+ E E+Q +F +FG I+++RI ++K T +SK + FI F DP
Sbjct: 108 TIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDP 158
>sp|Q9P6P7|YKCG_SCHPO Uncharacterized RNA-binding protein C644.16 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC644.16 PE=4 SV=1
Length = 422
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 50 VNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAE 109
+N + V+Y+G IP+ E+++ F Q G +K ++ + ++GQ K +GF E++DP A
Sbjct: 1 MNPSCVVYVGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEYHDPATAA 60
Query: 110 VVADAMHGYLLFEHILQVHL 129
++ Y L+V
Sbjct: 61 SAVRNLNNYDAGTRRLRVDF 80
>sp|Q5R9Z6|ELAV2_PONAB ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1
Length = 359
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
T L + +P ++E+++ F G I+ ++ R+K TGQS +GF+ + DP+ AE +
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 114 AMHGYLLFEHILQVHLIPPEHVH 136
++G L ++V P
Sbjct: 99 TLNGLRLQTKTIKVSYARPSSAS 121
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
LY+ +P +KE++ FSQ+G I RI ++ TG S+ GFI F+ AE +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 116 HG 117
+G
Sbjct: 187 NG 188
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 67 EKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQ 126
E + F FGA+ +++ R+ T + K FGF+ + + A + +++GY L + +LQ
Sbjct: 289 ESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQ 348
Query: 127 VHL 129
V
Sbjct: 349 VSF 351
>sp|Q12926|ELAV2_HUMAN ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2
Length = 359
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
T L + +P ++E+++ F G I+ ++ R+K TGQS +GF+ + DP+ AE +
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 114 AMHGYLLFEHILQVHLIPPEHVH 136
++G L ++V P
Sbjct: 99 TLNGLRLQTKTIKVSYARPSSAS 121
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
LY+ +P +KE++ FSQ+G I RI ++ TG S+ GFI F+ AE +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 116 HG 117
+G
Sbjct: 187 NG 188
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 67 EKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQ 126
E + F FGA+ +++ R+ T + K FGF+ + + A + +++GY L + +LQ
Sbjct: 289 ESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQ 348
Query: 127 VHL 129
V
Sbjct: 349 VSF 351
>sp|Q7TN33|CELF6_MOUSE CUGBP Elav-like family member 6 OS=Mus musculus GN=Celf6 PE=2 SV=1
Length = 460
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L+I +P F + E+ F FGA+ ++ ++ T QSK FGF+ F++P A+ AM
Sbjct: 377 LFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAM 436
Query: 116 HGYLLFEHILQVHLIPPEHVH 136
+G+ + L+V L P+ +
Sbjct: 437 NGFQIGMKRLKVQLKRPKDAN 457
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 53 ATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVA 112
A L++G+IP G E++++ F +FG I L + +++ TG K F+ + + A
Sbjct: 45 AIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQ 104
Query: 113 DAMH 116
A+H
Sbjct: 105 SALH 108
>sp|Q60899|ELAV2_MOUSE ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
T L + +P ++E+++ F G I+ ++ R+K TGQS +GF+ + DP+ AE +
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 114 AMHGYLLFEHILQVHLIPPEHVH 136
++G L ++V P
Sbjct: 99 TLNGLRLQTKTIKVSYARPSSAS 121
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
LY+ +P +KE++ FSQ+G I RI ++ TG S+ GFI F+ AE +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 116 HG 117
+G
Sbjct: 187 NG 188
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 67 EKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQ 126
E + F FGA+ +++ R+ T + K FGF+ + + A + +++GY L + +LQ
Sbjct: 290 ESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQ 349
Query: 127 VHL 129
V
Sbjct: 350 VSF 352
>sp|Q9IBD1|CELF3_DANRE CUGBP Elav-like family member 3 OS=Danio rerio GN=celf3 PE=2 SV=2
Length = 452
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
++I +P F + EM F FG + ++ ++ T QSK FGF+ F++P A+ AM
Sbjct: 369 IFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 428
Query: 116 HGYLLFEHILQVHLIPPEHVH 136
+G+ + L+V L P+ +
Sbjct: 429 NGFQIGMKRLKVQLKRPKDAN 449
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L+IG+IP EK+++ F QFG I L + ++K TG K F+ + E A +A+
Sbjct: 9 LFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNAL 68
Query: 116 H 116
H
Sbjct: 69 H 69
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L++G + + +++ F FG+I+ + R G SK F+++ A+ A+
Sbjct: 96 LFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGPD-GASKGCAFVKYQSNAEAQAAISAL 154
Query: 116 HG 117
HG
Sbjct: 155 HG 156
>sp|Q28GD4|ELAV2_XENTR ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2
Length = 375
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%)
Query: 45 EEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFND 104
E + T L + +P ++E+++ F G I+ ++ R+K TGQS +GF+ + D
Sbjct: 58 ESSNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 117
Query: 105 PEVAEVVADAMHGYLLFEHILQVHLIPPEHVH 136
P+ AE + ++G L ++V P
Sbjct: 118 PKDAEKAINTLNGLRLQTKTIKVSYARPSSAS 149
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
LY+ +P +KE++ FSQ+G I RI ++ TG S+ GFI F+ AE +
Sbjct: 155 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 214
Query: 116 HG 117
+G
Sbjct: 215 NG 216
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 67 EKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQ 126
E + F FGA+ +++ R+ T + K FGF+ + + A + +++GY L + +LQ
Sbjct: 305 ESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQ 364
Query: 127 VHL 129
V
Sbjct: 365 VSF 367
>sp|Q9SD61|C3H42_ARATH Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis
thaliana GN=At3g47120 PE=2 SV=1
Length = 352
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%)
Query: 53 ATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVA 112
+ +Y+G IP E ++ A FSQ+G I + + R+K TG+SK F F+ + D +
Sbjct: 35 SAYVYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAV 94
Query: 113 DAMHGYLLFEHILQVHLIPPEHVHPKLLYFVEMSIQELVAIC 154
D ++G L+ ++V H + +E +C
Sbjct: 95 DNLNGALVLGRTIKVDHCGAYKKHEEEDEETRRQNREARGVC 136
>sp|Q96J87|CELF6_HUMAN CUGBP Elav-like family member 6 OS=Homo sapiens GN=CELF6 PE=1 SV=1
Length = 481
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L+I +P F + E+ F FGA+ ++ ++ T QSK FGF+ F++P A+ AM
Sbjct: 398 LFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAM 457
Query: 116 HGYLLFEHILQVHLIPPEHVH 136
+G+ + L+V L P+ +
Sbjct: 458 NGFQIGMKRLKVQLKRPKDAN 478
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 53 ATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVA 112
A L++G+IP G E++++ F +FG I L + +++ TG K F+ + + A
Sbjct: 45 AIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQ 104
Query: 113 DAMH 116
A+H
Sbjct: 105 SALH 108
>sp|Q60900|ELAV3_MOUSE ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1 SV=1
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 37 GGPGRKLTEEKPLV-------NKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNK 89
GGP PL+ + T L + +P + E ++ F G I+ ++ R+K
Sbjct: 15 GGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDK 74
Query: 90 KTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVH 136
TGQS +GF+ ++DP A+ + ++G L ++V P
Sbjct: 75 ITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSAS 121
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
LY+ +P +KEM+ FSQ+G I RI ++ TG S+ GFI F+ AE +
Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGL 186
Query: 116 HG 117
+G
Sbjct: 187 NG 188
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 67 EKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQ 126
E + F FGA+ +++ R+ T + K FGF+ + + A + +++GY L E +LQ
Sbjct: 297 ESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQ 356
Query: 127 VHL 129
V
Sbjct: 357 VSF 359
>sp|Q14576|ELAV3_HUMAN ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1 SV=3
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 37 GGPGRKLTEEKPLV-------NKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNK 89
GGP PL+ + T L + +P + E ++ F G I+ ++ R+K
Sbjct: 15 GGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDK 74
Query: 90 KTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVH 136
TGQS +GF+ ++DP A+ + ++G L ++V P
Sbjct: 75 ITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSAS 121
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
LY+ +P +KEM+ FSQ+G I RI ++ TG S+ GFI F+ AE +
Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186
Query: 116 HG 117
+G
Sbjct: 187 NG 188
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 67 EKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQ 126
E + F FGA+ +++ R+ T + K FGF+ + + A + +++GY L E +LQ
Sbjct: 297 ESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQ 356
Query: 127 VHL 129
V
Sbjct: 357 VSF 359
>sp|Q8N6W0|CELF5_HUMAN CUGBP Elav-like family member 5 OS=Homo sapiens GN=CELF5 PE=1 SV=1
Length = 485
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L+I +P F + E+ F FG I ++ ++ T QSK FGF+ F++P A+ AM
Sbjct: 402 LFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAM 461
Query: 116 HGYLLFEHILQVHL 129
+G+ + L+V L
Sbjct: 462 NGFQIGMKRLKVQL 475
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 53 ATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVA 112
A L++G+IP EK+++ F QFG I L + ++ TG K F+ + + A
Sbjct: 44 AIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQ 103
Query: 113 DAMH 116
A+H
Sbjct: 104 TALH 107
>sp|Q61701|ELAV4_MOUSE ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1
Length = 385
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
T L + +P ++E ++ F G I+ ++ R+K TGQS +GF+ + DP+ AE +
Sbjct: 51 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 110
Query: 114 AMHGYLLFEHILQVHLIPPEHV 135
++G L ++V P
Sbjct: 111 TLNGLRLQTKTIKVSYARPSSA 132
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 67 EKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQ 126
E + F FGA+ +++ R+ T + K FGF+ + + A + +++GY L + +LQ
Sbjct: 315 ESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQ 374
Query: 127 VHL 129
V
Sbjct: 375 VSF 377
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
LY+ +P +KE++ FSQ+G I RI ++ TG S+ GFI F+ AE +
Sbjct: 139 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 198
Query: 116 HG 117
+G
Sbjct: 199 NG 200
>sp|O09032|ELAV4_RAT ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4 PE=1 SV=1
Length = 373
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
T L + +P ++E ++ F G I+ ++ R+K TGQS +GF+ + DP+ AE +
Sbjct: 39 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 114 AMHGYLLFEHILQVHLIPPEHV 135
++G L ++V P
Sbjct: 99 TLNGLRLQTKTIKVSYARPSSA 120
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 67 EKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQ 126
E + F FGA+ +++ R+ T + K FGF+ + + A + +++GY L + +LQ
Sbjct: 303 ESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQ 362
Query: 127 VHL 129
V
Sbjct: 363 VSF 365
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
LY+ +P +KE++ FSQ+G I RI ++ TG S+ GFI F+ AE +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186
Query: 116 HG 117
+G
Sbjct: 187 NG 188
>sp|P26378|ELAV4_HUMAN ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2
Length = 380
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
T L + +P ++E ++ F G I+ ++ R+K TGQS +GF+ + DP+ AE +
Sbjct: 46 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 105
Query: 114 AMHGYLLFEHILQVHLIPPEHV 135
++G L ++V P
Sbjct: 106 TLNGLRLQTKTIKVSYARPSSA 127
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 67 EKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQ 126
E + F FGA+ +++ R+ T + K FGF+ + + A + +++GY L + +LQ
Sbjct: 310 ESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQ 369
Query: 127 VHL 129
V
Sbjct: 370 VSF 372
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
LY+ +P +KE++ FSQ+G I RI ++ TG S+ GFI F+ AE +
Sbjct: 134 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 193
Query: 116 HG 117
+G
Sbjct: 194 NG 195
>sp|Q3ZC12|EIF3G_BOVIN Eukaryotic translation initiation factor 3 subunit G OS=Bos taurus
GN=EIF3G PE=2 SV=1
Length = 320
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 21 PVPSDKKGAADFLP--LEGGPGRKLTEEKP--LVNKATVLYIGRIPHGFYEKEMQAFFSQ 76
PV + + ++P L G R+ +P + + + + E ++Q F
Sbjct: 202 PVQATQNKTGKYVPPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRP 261
Query: 77 FGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPP 132
FG+I R+ +A++K TGQSK F FI F+ E A + G+ IL V P
Sbjct: 262 FGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 317
>sp|O75821|EIF3G_HUMAN Eukaryotic translation initiation factor 3 subunit G OS=Homo
sapiens GN=EIF3G PE=1 SV=2
Length = 320
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 21 PVPSDKKGAADFLP--LEGGPGRKLTEEKP--LVNKATVLYIGRIPHGFYEKEMQAFFSQ 76
PV + + ++P L G R+ +P + + + + E ++Q F
Sbjct: 202 PVQATQNKTGKYVPPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRP 261
Query: 77 FGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPP 132
FG+I R+ +A++K TGQSK F FI F+ E A + G+ IL V P
Sbjct: 262 FGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 317
>sp|P39697|RT19_ARATH 40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana
GN=RPS19 PE=1 SV=2
Length = 212
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 53 ATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVA 112
+T LYIG + G E ++ FS F + R+ NK TG+S+ +GF+ F + A
Sbjct: 30 STKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAI 89
Query: 113 DAMHGYLLFEHILQVHLIPPEHVHPKLLYFVEMSIQE 149
AM+G L + V++ P L ++ SI+E
Sbjct: 90 SAMNGQELNGFNISVNVAKD---WPSLPLSLDESIEE 123
>sp|Q8CH84|ELAV2_RAT ELAV-like protein 2 OS=Rattus norvegicus GN=Elavl2 PE=2 SV=1
Length = 359
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
T L +P ++E+++ F G I+ ++ R+K TGQS +GF+ + DP+ AE +
Sbjct: 39 TNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 114 AMHGYLLFEHILQVHLIPPEHVH 136
++G L ++V P
Sbjct: 99 TLNGLRLQTKTIKVSYARPSSAS 121
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
LY+ +P +KE++ FSQ+G I RI ++ TG S+ GFI F+ AE +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 116 HG 117
+G
Sbjct: 187 NG 188
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 67 EKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQ 126
E + F FGA+ +++ R+ T + K FGF+ + + A + +++GY L + +LQ
Sbjct: 289 ESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQ 348
Query: 127 VHL 129
V
Sbjct: 349 VSF 351
>sp|Q08E07|CELF3_BOVIN CUGBP Elav-like family member 3 OS=Bos taurus GN=CELF3 PE=2 SV=1
Length = 461
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
++I +P F + E+ F FG + ++ ++ T QSK FGF+ F++P A+ AM
Sbjct: 378 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 437
Query: 116 HGYLLFEHILQVHLIPPEHVH 136
+G+ + L+V L P+ +
Sbjct: 438 NGFQIGMKRLKVQLKRPKDAN 458
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L++G+IP EK+++ F QFG I L + ++K TG K F+ + + A A+
Sbjct: 9 LFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSAL 68
Query: 116 H 116
H
Sbjct: 69 H 69
>sp|Q8CIN6|CELF3_MOUSE CUGBP Elav-like family member 3 OS=Mus musculus GN=Celf3 PE=2 SV=1
Length = 465
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
++I +P F + E+ F FG + ++ ++ T QSK FGF+ F++P A+ AM
Sbjct: 382 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 441
Query: 116 HGYLLFEHILQVHLIPPEHVH 136
+G+ + L+V L P+ +
Sbjct: 442 NGFQIGMKRLKVQLKRPKDAN 462
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L++G+IP EK+++ F QFG I L + ++K TG K F+ + + A A+
Sbjct: 9 LFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSAL 68
Query: 116 H 116
H
Sbjct: 69 H 69
>sp|Q5SZQ8|CELF3_HUMAN CUGBP Elav-like family member 3 OS=Homo sapiens GN=CELF3 PE=1 SV=1
Length = 465
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
++I +P F + E+ F FG + ++ ++ T QSK FGF+ F++P A+ AM
Sbjct: 382 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 441
Query: 116 HGYLLFEHILQVHLIPPEHVH 136
+G+ + L+V L P+ +
Sbjct: 442 NGFQIGMKRLKVQLKRPKDAN 462
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L++G+IP EK+++ F QFG I L + ++K TG K F+ + + A A+
Sbjct: 9 LFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSAL 68
Query: 116 H 116
H
Sbjct: 69 H 69
>sp|Q91579|CEL3A_XENLA CUGBP Elav-like family member 3-A OS=Xenopus laevis GN=tnrc4-a PE=2
SV=2
Length = 462
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
++I +P F + E+ F FG + ++ ++ T QSK FGF+ F++P A+ AM
Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAM 438
Query: 116 HGYLLFEHILQVHLIPPEHVH 136
+G+ + L+V L P+ +
Sbjct: 439 NGFQIGMKRLKVQLKRPKDAN 459
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L+IG+IP EK+++ F QFG I L + ++K TG K F+ + E A A+
Sbjct: 9 LFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSAL 68
Query: 116 H 116
H
Sbjct: 69 H 69
>sp|Q5RK09|EIF3G_RAT Eukaryotic translation initiation factor 3 subunit G OS=Rattus
norvegicus GN=Eif3g PE=2 SV=1
Length = 320
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 21 PVPSDKKGAADFLP--LEGGPGRKLTEEKP--LVNKATVLYIGRIPHGFYEKEMQAFFSQ 76
PV + + ++P L G R+ +P + + + + E ++Q F
Sbjct: 202 PVQAAQNKTGKYVPPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRP 261
Query: 77 FGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPP 132
FG+I R+ +A++K TGQSK F FI F+ E A + G+ IL V P
Sbjct: 262 FGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 317
>sp|Q9SEU4|SR33_ARATH Serine/arginine-rich splicing factor 33 OS=Arabidopsis thaliana
GN=SR33 PE=1 SV=1
Length = 287
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
T L + + H +++++ F QFG +K + + R+ TG + FGF++F DP A
Sbjct: 36 TSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKH 95
Query: 114 AMHGYLLFEHILQV 127
M GYLL L V
Sbjct: 96 HMDGYLLLGRELTV 109
>sp|Q9Z1D1|EIF3G_MOUSE Eukaryotic translation initiation factor 3 subunit G OS=Mus
musculus GN=Eif3g PE=1 SV=2
Length = 320
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 21 PVPSDKKGAADFLP--LEGGPGRKLTEEKP--LVNKATVLYIGRIPHGFYEKEMQAFFSQ 76
PV + + ++P L G R+ +P + + + + E ++Q F
Sbjct: 202 PVQAAQSKTGKYVPPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRP 261
Query: 77 FGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPP 132
FG+I R+ +A++K TGQSK F FI F+ E A + G+ IL V P
Sbjct: 262 FGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 317
>sp|Q91584|ELAV3_XENLA ELAV-like protein 3 OS=Xenopus laevis GN=elavl3 PE=2 SV=1
Length = 348
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
T L + +P ++E ++ F G I+ ++ R+K TGQS +GF+ + DP A+ +
Sbjct: 34 TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAIN 93
Query: 114 AMHGYLLFEHILQVHLIPPE 133
++G L ++V P
Sbjct: 94 TLNGLKLQTKTIKVSYARPS 113
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
LY+ +P +KEM+ FSQ+G I RI ++ TG S+ GFI F+ AE +
Sbjct: 122 LYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 181
Query: 116 HG 117
+G
Sbjct: 182 NG 183
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 67 EKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQ 126
E + F FGA+ +++ R+ T + K FGF+ + + A + +++GY L + +LQ
Sbjct: 278 ESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQ 337
Query: 127 VHL 129
V
Sbjct: 338 VSF 340
>sp|Q28FX0|ELAV3_XENTR ELAV-like protein 3 OS=Xenopus tropicalis GN=elavl3 PE=2 SV=1
Length = 343
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
T L + +P ++E ++ F G I+ ++ R+K TGQS +GF+ + DP A+ +
Sbjct: 35 TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAIN 94
Query: 114 AMHGYLLFEHILQVHLIPPE 133
++G L ++V P
Sbjct: 95 TLNGLKLQTKTIKVSYARPS 114
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 67 EKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQ 126
E + F FGA+ +++ R+ T + K FGF+ + + A + +++GY L + +LQ
Sbjct: 273 ESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQ 332
Query: 127 VHL 129
V
Sbjct: 333 VSF 335
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQ-SKHFGFIEFNDPEVAEVVADA 114
LY+ +P +KEM+ FSQ+G I RI ++ TG S+ GFI F+ AE
Sbjct: 123 LYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFDKRIEAEEAIKG 182
Query: 115 MHG 117
++G
Sbjct: 183 LNG 185
>sp|Q6DGV1|CELF4_DANRE CUGBP Elav-like family member 4 OS=Danio rerio GN=celf4 PE=2 SV=1
Length = 520
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L+I +P F + E+ F FG + ++ ++ T QSK FGF+ F++P A+ +M
Sbjct: 437 LFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSM 496
Query: 116 HGYLLFEHILQVHLIPPEHVH 136
+G+ + L+V L P+ +
Sbjct: 497 NGFQIGMKRLKVQLKRPKDAN 517
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 53 ATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVA 112
A L+IG+IP EK+++ F +FG I L + +++ TG K F+ + E A
Sbjct: 46 AIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQ 105
Query: 113 DAMH 116
A+H
Sbjct: 106 TALH 109
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
L++G + E +++ F FG+I+ I R G SK F++++ A+ A+
Sbjct: 137 LFVGMLNKQQCEDDVRRLFESFGSIEECTILRGPD-GNSKGCAFVKYSTHAEAQAAISAL 195
Query: 116 HG 117
HG
Sbjct: 196 HG 197
>sp|Q6DRC4|EIF3G_DANRE Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio
GN=eif3g PE=1 SV=1
Length = 293
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 50 VNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAE 109
+ + + + E ++Q F FG+I R+ +A++K TGQSK F FI F+ E A
Sbjct: 208 ADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGFAFISFHRREDAA 267
Query: 110 VVADAMHGYLLFEHILQVHLIPPEH 134
+ G+ IL V P +
Sbjct: 268 RAIAGVSGFGYDHLILNVEWAKPSN 292
>sp|Q7ZWM3|CEL3B_XENLA CUGBP Elav-like family member 3-B OS=Xenopus laevis GN=tnrc4-b PE=2
SV=1
Length = 462
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
++I +P F + E+ F FG + ++ ++ T QSK FGF+ F++P A+ +M
Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSM 438
Query: 116 HGYLLFEHILQVHLIPPEHVH 136
+G+ + L+V L P+ +
Sbjct: 439 NGFQIGMKRLKVQLKRPKDAN 459
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 53 ATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVA 112
A L+IG+IP EK+++ F QFG I L + ++K TG K F+ + E A
Sbjct: 6 AIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQ 65
Query: 113 DAMH 116
A+H
Sbjct: 66 SALH 69
>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5
PE=1 SV=3
Length = 682
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
T +Y+ +P + E++ F ++G I + +++ +G S+ FGF+ F PE A V +
Sbjct: 239 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFVSPEAAAVAVE 297
Query: 114 AMHGYLLFEHILQV 127
M+G L E +L V
Sbjct: 298 KMNGISLGEDVLYV 311
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 52 KATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVV 111
+ + LY+ + +++++ FS++G + ++ N + G S+ FGF+ +++PE A +
Sbjct: 340 QGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLA 398
Query: 112 ADAMHGYLLFEHILQVHL 129
M+G ++ L V L
Sbjct: 399 MKEMNGKMIGRKPLYVAL 416
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 31 DFLPLEGGPGR-KLTEEKP---LVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIA 86
++ P+ P R L+ P L K V +I + K + FS FG I ++A
Sbjct: 120 NYAPIRDRPIRIMLSNRDPSTRLSGKGNV-FIKNLDASIDNKALYETFSSFGTILSCKVA 178
Query: 87 RNKKTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFE 122
+ G+SK +GF++F E A+ D ++G LL +
Sbjct: 179 MDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLND 213
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
+ LY+G + E + F+Q + LR+ R+ T +S + ++ F +PE A +
Sbjct: 59 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAME 117
Query: 114 AMH 116
+++
Sbjct: 118 SLN 120
>sp|O94290|IST3_SCHPO U2 snRNP component ist3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=cwf29 PE=1 SV=1
Length = 217
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 53 ATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVA 112
+ +YIG + E ++ FS+FG + + R+K+TG+SK F F+++ D +
Sbjct: 30 SAYIYIGNLDFDLNEDDILCVFSEFGEPVDINLVRDKETGKSKGFAFLKYEDQRSTVLAV 89
Query: 113 DAMHGYLLFEHILQV 127
D M L + +++V
Sbjct: 90 DNMTNVKLLDRLVRV 104
>sp|Q8L716|U2A2B_ARATH Splicing factor U2af large subunit B OS=Arabidopsis thaliana
GN=U2AF65B PE=2 SV=2
Length = 589
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 44/83 (53%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
+++G +P+ F E +++ FG ++ + ++++TG SK + F + DP V ++ A+
Sbjct: 377 IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAAL 436
Query: 116 HGYLLFEHILQVHLIPPEHVHPK 138
+G + + L V + PK
Sbjct: 437 NGIKMGDKTLTVRRAIQGAIQPK 459
>sp|Q9WX37|RBPE_NOSS1 Putative RNA-binding protein RbpE OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=rbpE PE=3 SV=3
Length = 99
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 42/79 (53%)
Query: 56 LYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVADAM 115
+Y+G + + + ++ FS++G++ R+++ +++TG+ + FGF+E + A+
Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQAL 62
Query: 116 HGYLLFEHILQVHLIPPEH 134
G +L+V+ P
Sbjct: 63 DGAEWMGRVLKVNKARPRE 81
>sp|P25299|RNA15_YEAST mRNA 3'-end-processing protein RNA15 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RNA15 PE=1 SV=1
Length = 296
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 53 ATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVA 112
+ V+Y+G IP+ E+++ S G + L++ + +TG+SK + FIEF D E +
Sbjct: 17 SRVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAV 76
Query: 113 DAMHGYLLFEHILQV 127
++GY L L+
Sbjct: 77 RNLNGYQLGSRFLKC 91
>sp|Q4WAQ9|PPIL4_ASPFU Peptidyl-prolyl cis-trans isomerase-like 4 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=cyp6 PE=3 SV=1
Length = 459
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 54 TVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKKTGQSKHFGFIEFNDPEVAEVVAD 113
VL++ ++ ++++Q FS+FG I + R+K+TG S + FIEF + + E
Sbjct: 248 NVLFVCKLNPVTQDEDLQLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYF 307
Query: 114 AMHGYLLFEHILQVHL 129
M G L+ +H + V
Sbjct: 308 KMQGVLIDDHRIHVDF 323
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,608,980
Number of Sequences: 539616
Number of extensions: 2414884
Number of successful extensions: 6737
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 233
Number of HSP's that attempted gapping in prelim test: 5603
Number of HSP's gapped (non-prelim): 1274
length of query: 156
length of database: 191,569,459
effective HSP length: 107
effective length of query: 49
effective length of database: 133,830,547
effective search space: 6557696803
effective search space used: 6557696803
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)