Query 031600
Match_columns 156
No_of_seqs 165 out of 1141
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 03:48:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031600.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031600hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ava_A ACP I, acyl carrier pro 99.7 4.2E-17 1.4E-21 109.1 9.9 79 77-155 2-81 (82)
2 2kjs_A Putative acyl carrier p 99.7 1.8E-17 6.2E-22 113.7 8.1 75 80-154 3-78 (87)
3 2l9f_A CALE8, meacp; transfera 99.7 3.3E-17 1.1E-21 115.5 9.6 78 77-155 12-92 (102)
4 3gzm_A Acyl carrier protein; h 99.7 1.6E-17 5.3E-22 111.4 7.4 78 76-153 2-80 (81)
5 2kci_A Putative acyl carrier p 99.7 2.8E-17 9.5E-22 113.0 8.2 76 79-154 2-78 (87)
6 2lol_A ACP, acyl carrier prote 99.7 1.6E-16 5.4E-21 105.9 9.3 77 76-152 3-80 (81)
7 3ejb_A Acyl carrier protein; p 99.7 5.2E-17 1.8E-21 113.2 7.1 78 75-152 18-96 (97)
8 1vku_A Acyl carrier protein; T 99.7 1.6E-16 5.4E-21 111.6 9.5 81 75-155 13-93 (100)
9 2qnw_A Acyl carrier protein; m 99.7 1.2E-16 4.2E-21 107.1 8.0 78 75-152 3-81 (82)
10 1af8_A Actinorhodin polyketide 99.7 4.9E-17 1.7E-21 109.8 6.0 79 78-156 4-86 (86)
11 2kwl_A ACP, acyl carrier prote 99.7 1.6E-16 5.4E-21 106.8 8.3 78 75-152 5-83 (84)
12 4dxe_H ACP, acyl carrier prote 99.7 8E-17 2.7E-21 113.3 6.5 78 75-152 22-100 (101)
13 2dnw_A Acyl carrier protein; A 99.7 3.3E-16 1.1E-20 109.0 9.5 80 75-154 11-91 (99)
14 1x3o_A Acyl carrier protein; s 99.7 2.7E-16 9.2E-21 104.1 8.1 77 76-152 2-79 (80)
15 2cnr_A FAS, ACP, acyl carrier 99.7 3.8E-16 1.3E-20 104.0 8.8 78 75-152 3-81 (82)
16 1l0i_A Acyl carrier protein; a 99.7 2.3E-16 7.7E-21 104.4 7.1 74 79-152 3-77 (78)
17 1f80_D Acyl carrier protein; t 99.7 1E-16 3.5E-21 106.8 5.3 76 76-151 4-80 (81)
18 2l4b_A Acyl carrier protein; i 99.6 1.4E-16 4.8E-21 108.2 5.7 80 75-154 4-87 (88)
19 1dv5_A APO-DCP, APO-D-alanyl c 99.6 3.2E-16 1.1E-20 105.2 7.3 75 77-151 2-79 (80)
20 1klp_A ACP, ACPM, meromycolate 99.6 1E-15 3.4E-20 109.4 9.5 81 75-155 3-84 (115)
21 3ce7_A Specific mitochodrial a 99.6 1.1E-15 3.9E-20 108.4 9.1 80 75-155 15-100 (107)
22 2ehs_A ACP, acyl carrier prote 99.6 1.4E-15 4.6E-20 99.9 7.4 74 80-153 2-76 (77)
23 2kw2_A Specialized acyl carrie 99.6 8.9E-16 3E-20 107.5 6.5 77 79-155 3-91 (101)
24 2lki_A Putative uncharacterize 99.6 1.7E-15 5.7E-20 107.3 7.7 78 76-153 21-104 (105)
25 2jq4_A AGR_C_4658P, hypothetic 99.6 1.2E-15 4E-20 107.9 6.5 81 74-154 17-101 (105)
26 1nq4_A Oxytetracycline polyket 99.6 1.5E-15 5E-20 105.3 6.9 76 80-155 5-84 (95)
27 2amw_A Hypothetical protein NE 99.6 3.3E-15 1.1E-19 100.4 7.7 75 79-153 2-82 (83)
28 1or5_A Acyl carrier protein; A 99.6 2.8E-16 9.5E-21 105.4 1.8 76 79-154 4-82 (83)
29 2lte_A Specialized acyl carrie 99.4 1.3E-16 4.4E-21 112.6 0.0 77 79-155 26-102 (103)
30 2afd_A Protein ASL1650; twiste 99.6 1.1E-14 3.7E-19 97.7 9.4 78 75-152 10-87 (88)
31 2l3v_A ACP, acyl carrier prote 99.6 2.4E-16 8.1E-21 104.5 0.7 75 78-152 3-78 (79)
32 2cgq_A Acyl carrier protein AC 99.6 2.8E-15 9.6E-20 107.6 5.3 74 77-155 28-102 (113)
33 2kr5_A PKS, aflatoxin biosynth 99.5 1.5E-14 5E-19 97.7 7.1 76 75-150 7-84 (89)
34 4i4d_A Peptide synthetase NRPS 99.5 2.7E-14 9.2E-19 98.1 7.8 76 77-154 14-89 (93)
35 2liu_A CURA; holo state, trans 99.5 2.3E-14 8E-19 98.1 6.8 80 75-154 17-96 (99)
36 1dny_A Non-ribosomal peptide s 99.5 3.3E-14 1.1E-18 97.5 7.3 76 74-151 9-84 (91)
37 1fh1_A NODF, nodulation protei 99.5 8.9E-16 3.1E-20 105.5 -1.3 78 79-156 4-92 (92)
38 2ju1_A Erythronolide synthase; 99.5 3E-14 1E-18 97.3 5.6 76 77-152 18-94 (95)
39 2l22_A Mupirocin didomain acyl 99.4 2.7E-13 9.2E-18 105.4 6.9 79 75-153 22-100 (212)
40 2cg5_B Fatty acid synthase; tr 99.4 5.4E-13 1.9E-17 92.3 6.9 69 82-151 9-78 (91)
41 2l22_A Mupirocin didomain acyl 99.4 2.4E-12 8.1E-17 100.1 10.0 78 77-154 128-205 (212)
42 2cq8_A 10-formyltetrahydrofola 99.3 3.3E-12 1.1E-16 91.2 6.5 78 74-153 20-99 (110)
43 3tej_A Enterobactin synthase c 99.1 8.9E-11 3E-15 95.7 7.9 77 74-152 6-82 (329)
44 2jgp_A Tyrocidine synthetase 3 99.0 1E-09 3.5E-14 93.9 8.2 77 73-151 4-80 (520)
45 4f6l_B AUSA reductase domain p 98.7 1.2E-09 4.2E-14 94.0 0.0 77 73-152 39-115 (508)
46 2vsq_A Surfactin synthetase su 98.7 2.4E-08 8.3E-13 94.8 7.1 78 73-152 966-1043(1304)
47 2fq1_A Isochorismatase; ENTB, 98.6 2.3E-08 8E-13 81.0 4.6 66 82-149 218-283 (287)
48 4dg8_A PA1221; ANL superfamily 98.6 7.8E-09 2.7E-13 91.5 0.0 76 75-152 520-596 (620)
49 3rg2_A Enterobactin synthase c 98.4 1.6E-07 5.6E-12 82.4 4.8 72 79-152 545-616 (617)
50 2vz8_A Fatty acid synthase; tr 97.7 4.7E-06 1.6E-10 84.1 0.0 71 80-151 2124-2195(2512)
51 3zen_D Fatty acid synthase; tr 84.9 0.18 6E-06 52.4 0.0 54 80-133 1795-1849(3089)
52 2hfk_A Pikromycin, type I poly 78.4 0.09 3.1E-06 41.6 -4.0 43 73-127 22-64 (319)
53 1dd4_C 50S ribosomal protein L 58.7 9.9 0.00034 21.6 3.0 18 112-129 15-32 (40)
54 1zav_U 50S ribosomal protein L 45.6 17 0.00057 19.3 2.3 15 113-127 16-30 (30)
55 2uv8_A Fatty acid synthase sub 42.9 62 0.0021 32.6 7.5 68 80-150 147-215 (1887)
56 1q1v_A DEK protein; winged-hel 40.3 24 0.00082 22.3 2.9 42 75-133 12-54 (70)
57 3lae_A UPF0053 protein HI0107; 31.8 46 0.0016 20.9 3.3 25 120-147 20-44 (81)
58 3s93_A Tudor domain-containing 31.2 1.2E+02 0.0041 20.3 6.4 54 77-145 5-58 (102)
59 2pls_A CBS domain protein; APC 30.9 47 0.0016 21.0 3.3 30 120-149 20-50 (86)
60 2rk5_A Putative hemolysin; str 30.0 49 0.0017 21.0 3.2 26 120-148 19-44 (87)
61 3llb_A Uncharacterized protein 29.8 51 0.0017 20.8 3.3 26 120-148 20-45 (83)
62 2oai_A Hemolysin; PFAM03471, x 29.6 43 0.0015 21.7 2.9 31 119-149 28-58 (94)
63 2p3h_A Uncharacterized CBS dom 29.4 50 0.0017 22.0 3.3 27 120-149 23-49 (101)
64 2ftc_E L12MT, MRP-L12, 39S rib 27.7 61 0.0021 23.2 3.7 17 113-129 16-32 (137)
65 2pli_A Uncharacterized protein 26.6 62 0.0021 20.7 3.3 27 119-148 28-54 (91)
66 2r2z_A Hemolysin; APC85144, en 26.4 61 0.0021 20.8 3.2 27 119-148 26-52 (93)
67 2p13_A CBS domain; alpha-beta 24.7 72 0.0025 20.3 3.4 29 119-148 25-53 (90)
68 3ufe_A Transcriptional antiter 23.0 53 0.0018 21.2 2.5 21 115-135 79-99 (111)
69 3ded_A Probable hemolysin; str 21.9 90 0.0031 21.1 3.5 31 119-149 45-77 (113)
70 2p4p_A Hypothetical protein HD 20.9 85 0.0029 19.8 3.1 27 120-148 20-47 (86)
No 1
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=99.72 E-value=4.2e-17 Score=109.12 Aligned_cols=79 Identities=46% Similarity=0.734 Sum_probs=74.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCC-CCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhhcc
Q 031600 77 QPETLQTVQSTIAKQLSIDLS-AVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKAAS 155 (156)
Q Consensus 77 ~~ei~~~I~~ii~~~l~~~~~-~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~~~ 155 (156)
++++.++|++++++.++++.+ +++++++|.|||+|||+.++++..||++||+++|..++.++.|++++++||.++++..
T Consensus 2 ~~~i~~~l~~i~~~~l~~~~~~~i~~~~~l~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~~~ 81 (82)
T 2ava_A 2 KKETIDKVSDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLEKK 81 (82)
T ss_dssp CHHHHHHHHHHHHHHTTCSSSSCCCSSCCSCCCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhCCCcccccCCCCchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999876 8999999999999999999999999999999999999999999999999999887654
No 2
>2kjs_A Putative acyl carrier protein; alpha, ACP, PNS, structural genomics, PSI-2, protein structure initiative; HET: PNS; NMR {Geobacter metallireducens gs-15} PDB: 2lml_A* 2kwm_A*
Probab=99.72 E-value=1.8e-17 Score=113.75 Aligned_cols=75 Identities=24% Similarity=0.328 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCccc-cCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhhc
Q 031600 80 TLQTVQSTIAKQLSIDLSAVTPDTKFAD-LGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKAA 154 (156)
Q Consensus 80 i~~~I~~ii~~~l~~~~~~i~~d~~f~d-LGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~~ 154 (156)
+.++++++++++++++...+++++.|.| +|||||+.++++.+||++||++||..++.+++||+++++||.+++++
T Consensus 3 tle~l~~I~~e~l~~d~~~i~~~~~~~d~lg~DSL~~veli~~ie~~fgi~i~~~~l~~~~TV~dl~~~I~~kl~~ 78 (87)
T 2kjs_A 3 TLDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLAR 78 (87)
T ss_dssp SHHHHHHHHHHHHTCSSCCCCTTCCSTTCSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCccccCCCCCcccCCCCChHHHHHHHHHHHHHhCceecHHHHHcCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999985 89999999999999999999999999999999999999999999865
No 3
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=99.72 E-value=3.3e-17 Score=115.48 Aligned_cols=78 Identities=21% Similarity=0.342 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCccCcccccCC--CCHHHHHHHHHHHhh
Q 031600 77 QPETLQTVQSTIAKQLSIDLSAVTPDTKFA-DLGADSLDTVEIMMALEEQFGVSVGEEGAENI--ATVQDAADLIEKVKA 153 (156)
Q Consensus 77 ~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~-dLGlDSL~~veii~~iee~f~i~I~~~~l~~~--~Tv~~l~~~I~~~~~ 153 (156)
..+|.++|++++.+.+|++.++++++++|. |||+|||+.+||++.+|++||+++|++ ..++ .||+++++||.++.+
T Consensus 12 ~~~I~~~V~~ilaE~lev~~e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~ipd~-~e~~~~~TV~d~vdyI~~~~~ 90 (102)
T 2l9f_A 12 ATGALELVRHLVAERAELPVEVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSAVAM-PTNFATATVREMAEALEARER 90 (102)
T ss_dssp SCCHHHHHHHHHHHHTTSCSSSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCSTTSS-CSCCTTCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCCCCcc-HHHHHHccHHHHHHHHHHhhc
Confidence 467999999999999999999999999997 999999999999999999999999987 6666 999999999999887
Q ss_pred cc
Q 031600 154 AS 155 (156)
Q Consensus 154 ~~ 155 (156)
++
T Consensus 91 ~~ 92 (102)
T 2l9f_A 91 EA 92 (102)
T ss_dssp TC
T ss_pred cc
Confidence 64
No 4
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=99.71 E-value=1.6e-17 Score=111.37 Aligned_cols=78 Identities=45% Similarity=0.677 Sum_probs=73.6
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhh
Q 031600 76 AQPETLQTVQSTIAKQLSIDLSAVTPDTKFA-DLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKA 153 (156)
Q Consensus 76 ~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~-dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~ 153 (156)
+++++.++|++++++.++++.++++++++|. |||+|||+.++++..+|++||+++|.+++.++.|++++++||.++++
T Consensus 2 ~~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 80 (81)
T 3gzm_A 2 SLKSTFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNNK 80 (81)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHhc
Confidence 3678999999999999999999999999995 99999999999999999999999999999999999999999998865
No 5
>2kci_A Putative acyl carrier protein; alpha, ACP, PCP, structural genomics, unknown function, PSI- 2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 2kjs_A* 2lml_A* 2kwm_A*
Probab=99.71 E-value=2.8e-17 Score=112.99 Aligned_cols=76 Identities=22% Similarity=0.284 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhhc
Q 031600 79 ETLQTVQSTIAKQLSIDLSAVTPDTKFA-DLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKAA 154 (156)
Q Consensus 79 ei~~~I~~ii~~~l~~~~~~i~~d~~f~-dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~~ 154 (156)
++.++++++++++++++.++++++++|. ++|||||+.+++++.||++||++||++++.++.|++++++||.++++.
T Consensus 2 ~i~ekv~~il~e~l~~d~~~i~~d~~l~~dlg~DSL~~veli~~lE~eF~I~i~~ed~~~~~Tv~dlv~~I~~~~~~ 78 (87)
T 2kci_A 2 PTLDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLAR 78 (87)
T ss_dssp CSHHHHHHHHHHHTTCSCCCCCTTCCSTTCCCCCSTHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCHHHCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999998 699999999999999999999999999999999999999999988653
No 6
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=99.69 E-value=1.6e-16 Score=105.93 Aligned_cols=77 Identities=38% Similarity=0.589 Sum_probs=72.9
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 76 AQPETLQTVQSTIAKQLSIDLSAVTPDTKFA-DLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 76 ~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~-dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
.++++.++|++++++.++++.++++++++|+ ++|+|||+.++++..+|++||+++|..++.++.|++++++||.+++
T Consensus 3 ~~~~i~~~l~~ii~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 80 (81)
T 2lol_A 3 TTDKIEQKVIEMVAEKLNKDKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKERQ 80 (81)
T ss_dssp SHHHHHHHHHHHHHHHSCCCTTTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHCCChhhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 3678999999999999999989999999995 9999999999999999999999999999999999999999998865
No 7
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*
Probab=99.68 E-value=5.2e-17 Score=113.20 Aligned_cols=78 Identities=44% Similarity=0.610 Sum_probs=73.5
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKFA-DLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~-dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
..++++.++|++++++.+|++.++++++++|. |||+|||+.++|+..||++||++|+.+++.++.||+++++||.+++
T Consensus 18 ~t~~~i~~~l~~iia~~l~~~~~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 96 (97)
T 3ejb_A 18 SHMSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQ 96 (97)
T ss_dssp CCCCCHHHHHHHHHHHHSCCCTTTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHHHHCcCHHHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHHhc
Confidence 45788999999999999999999999999995 9999999999999999999999999999999999999999998764
No 8
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=99.68 E-value=1.6e-16 Score=111.60 Aligned_cols=81 Identities=22% Similarity=0.448 Sum_probs=76.3
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhhc
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKAA 154 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~~ 154 (156)
..+.++.++|++++++.++++.++++++++|.|||+|||+.++|+..||++||++||..++.++.||+++++||.+++++
T Consensus 13 ~~~~~i~~~l~~ila~~l~v~~~~I~~d~~L~dLGlDSL~~veL~~~LE~~fgi~i~~~~l~~~~TV~~L~~~I~~~~~~ 92 (100)
T 1vku_A 13 MERKKLIAKFVEIASEKMGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKLEE 92 (100)
T ss_dssp THHHHHHHHHHHHHHHTTCCCCCSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHcCCchHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHhhh
Confidence 34778999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred c
Q 031600 155 S 155 (156)
Q Consensus 155 ~ 155 (156)
.
T Consensus 93 ~ 93 (100)
T 1vku_A 93 I 93 (100)
T ss_dssp C
T ss_pred h
Confidence 4
No 9
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=99.68 E-value=1.2e-16 Score=107.08 Aligned_cols=78 Identities=49% Similarity=0.744 Sum_probs=73.7
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKF-ADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f-~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
.+++++.++|++++++.++++.++++++++| .|||+|||+.++++..||++||+++|..++.++.|++++++||.+++
T Consensus 3 ~~~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (82)
T 2qnw_A 3 SDDRPLLERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKAK 81 (82)
T ss_dssp CCSHHHHHHHHHHHHHHHCCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHCCCHhhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHHHHHHhc
Confidence 3477899999999999999998999999999 59999999999999999999999999999999999999999999875
No 10
>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*
Probab=99.68 E-value=4.9e-17 Score=109.80 Aligned_cols=79 Identities=27% Similarity=0.335 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHhCCCCC----CCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhh
Q 031600 78 PETLQTVQSTIAKQLSIDLS----AVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKA 153 (156)
Q Consensus 78 ~ei~~~I~~ii~~~l~~~~~----~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~ 153 (156)
+.+.++|+++++++++++.+ +++++++|.|||+|||+.++++..||++||+++|..++.++.|++++++||.++++
T Consensus 4 ~~~~~~l~~il~~~l~~~~~~~~~~i~~~~~l~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 83 (86)
T 1af8_A 4 LLTTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALA 83 (86)
T ss_dssp SSCHHHHHHHHHTTCCCCSCCCTTTCSSTTSTTTTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccccccCCCCCChhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHhh
Confidence 45778999999999999876 78899999999999999999999999999999999999999999999999999987
Q ss_pred ccC
Q 031600 154 ASA 156 (156)
Q Consensus 154 ~~a 156 (156)
+.|
T Consensus 84 ~~~ 86 (86)
T 1af8_A 84 EAA 86 (86)
T ss_dssp HHC
T ss_pred ccC
Confidence 754
No 11
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=99.67 E-value=1.6e-16 Score=106.84 Aligned_cols=78 Identities=37% Similarity=0.533 Sum_probs=74.1
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKF-ADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f-~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
..++++.++|++++++.++++.++++++++| .|||+|||+.++++..||++||+++|..++.++.|++++++||.+++
T Consensus 5 m~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 83 (84)
T 2kwl_A 5 MDNDEIFSKVRSIISEQLDKKEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIKKRK 83 (84)
T ss_dssp STHHHHHHHHHHHHHHHHCCCGGGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCcccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHHc
Confidence 4578899999999999999998999999999 69999999999999999999999999999999999999999999875
No 12
>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}
Probab=99.67 E-value=8e-17 Score=113.33 Aligned_cols=78 Identities=41% Similarity=0.666 Sum_probs=70.7
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKF-ADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f-~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
..+.++.++|++++++.++++.++++++++| .|||+|||+.++|+..||++||++||.+++.++.||+++++||.++.
T Consensus 22 m~~mei~~~l~~iiae~l~~~~~~I~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~Tv~dl~~~I~~~~ 100 (101)
T 4dxe_H 22 SNAMENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSLE 100 (101)
T ss_dssp --CTTHHHHHHHHHHHTTCCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCBHHHHHHHHC---
T ss_pred cCHHHHHHHHHHHHHHHHCcChhhCCCCCcchhhcCCCcHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHcc
Confidence 3456899999999999999999999999999 69999999999999999999999999999999999999999998764
No 13
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=3.3e-16 Score=108.96 Aligned_cols=80 Identities=31% Similarity=0.442 Sum_probs=75.5
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhh
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKFA-DLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKA 153 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~-dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~ 153 (156)
..++++.++|+++++++++++.++++++++|+ |||+|||+.++++..||++||++|+..++.++.|++++++||.+++.
T Consensus 11 m~~~~i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~ 90 (99)
T 2dnw_A 11 LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADKKD 90 (99)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHHHhCCCHhhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHHHhc
Confidence 55789999999999999999989999999995 99999999999999999999999999999999999999999998875
Q ss_pred c
Q 031600 154 A 154 (156)
Q Consensus 154 ~ 154 (156)
.
T Consensus 91 ~ 91 (99)
T 2dnw_A 91 V 91 (99)
T ss_dssp S
T ss_pred c
Confidence 4
No 14
>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}
Probab=99.66 E-value=2.7e-16 Score=104.14 Aligned_cols=77 Identities=43% Similarity=0.716 Sum_probs=73.0
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 76 AQPETLQTVQSTIAKQLSIDLSAVTPDTKF-ADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 76 ~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f-~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
.++++.+++++++++.++++.++++++++| .++|+|||+.++++..+|++||+++|..++.+++|++++++||.+++
T Consensus 2 ~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 79 (80)
T 1x3o_A 2 TEQEIFEKVKAVIADKLQVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKAKL 79 (80)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCCHHHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHc
Confidence 367899999999999999998899999999 79999999999999999999999999999999999999999999875
No 15
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=99.66 E-value=3.8e-16 Score=103.98 Aligned_cols=78 Identities=32% Similarity=0.480 Sum_probs=73.4
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKFA-DLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~-dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
..++++.+++++++++.++++.++++++++|+ ++|+|||+.++++..+|++||+++|..++.++.|++++++||.+++
T Consensus 3 m~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (82)
T 2cnr_A 3 ATQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDHQ 81 (82)
T ss_dssp CCHHHHHHHHHHHHHHHSCCCTTTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHHHSB
T ss_pred CCHHHHHHHHHHHHHHHhCCCHHHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHHc
Confidence 34788999999999999999989999999995 9999999999999999999999999999999999999999998764
No 16
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=99.65 E-value=2.3e-16 Score=104.44 Aligned_cols=74 Identities=45% Similarity=0.637 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 79 ETLQTVQSTIAKQLSIDLSAVTPDTKFA-DLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 79 ei~~~I~~ii~~~l~~~~~~i~~d~~f~-dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
++.+++++++++.++++.++++++++|. ++|+|||+.++++..+|++||+++|..++.+++|++++++||.++.
T Consensus 3 ~i~~~l~~~~~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 77 (78)
T 1l0i_A 3 TIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYINGHQ 77 (78)
T ss_dssp CHHHHHHHHHHHHHTCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 5789999999999999988999999996 9999999999999999999999999999999999999999998764
No 17
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=99.65 E-value=1e-16 Score=106.84 Aligned_cols=76 Identities=41% Similarity=0.672 Sum_probs=70.5
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHH
Q 031600 76 AQPETLQTVQSTIAKQLSIDLSAVTPDTKF-ADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKV 151 (156)
Q Consensus 76 ~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f-~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~ 151 (156)
.++++.+++++++++.++++.++++++++| .|+|+|||+.++++..||++||++++..++.++.|++++++||.++
T Consensus 4 ~~~~i~~~l~~~l~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 80 (81)
T 1f80_D 4 GSADTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQNQ 80 (81)
T ss_dssp -CCHHHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC--
T ss_pred CHHHHHHHHHHHHHHHHCCCHHhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHHHHhh
Confidence 467899999999999999999999999999 7999999999999999999999999999999999999999998765
No 18
>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}
Probab=99.65 E-value=1.4e-16 Score=108.23 Aligned_cols=80 Identities=26% Similarity=0.415 Sum_probs=74.2
Q ss_pred CChHHHHHHHHHHHHHHh---CCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHH
Q 031600 75 AAQPETLQTVQSTIAKQL---SIDLSAVTPDTKF-ADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEK 150 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l---~~~~~~i~~d~~f-~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~ 150 (156)
..++++.++|++++++.+ +++.++++++++| .++|+|||+.++++..||++||++|+.+++.++.|++++++||.+
T Consensus 4 m~~~~i~~~v~~~i~~~l~~~~~~~~~i~~d~~l~~dlglDSl~~vel~~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 83 (88)
T 2l4b_A 4 MVSEEIKAQVMESVIGCLKLNDEQKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEISDEDAQKLETVDDICRYIAS 83 (88)
T ss_dssp SSCHHHHHHHHHHHHHHHTCCHHHHHSCCTTSCTTTTTTCCHHHHHHHHHHHHHHTTCCCCHHHHHTCCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhCCCCHhhCCCCCchhhccCCcHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHH
Confidence 347889999999999999 7777889999999 599999999999999999999999999999999999999999998
Q ss_pred Hhhc
Q 031600 151 VKAA 154 (156)
Q Consensus 151 ~~~~ 154 (156)
++++
T Consensus 84 ~~~~ 87 (88)
T 2l4b_A 84 KSSD 87 (88)
T ss_dssp HSSC
T ss_pred hhcc
Confidence 8754
No 19
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=99.65 E-value=3.2e-16 Score=105.16 Aligned_cols=75 Identities=21% Similarity=0.269 Sum_probs=70.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCCccccC-CChHHHHHHHHHHHHHhCCccCccccc--CCCCHHHHHHHHHHH
Q 031600 77 QPETLQTVQSTIAKQLSIDLSAVTPDTKFADLG-ADSLDTVEIMMALEEQFGVSVGEEGAE--NIATVQDAADLIEKV 151 (156)
Q Consensus 77 ~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLG-lDSL~~veii~~iee~f~i~I~~~~l~--~~~Tv~~l~~~I~~~ 151 (156)
++++.++|++++++.++.+..+++++++|.++| +|||+.+++++.||++||++||++++. ++.|++++++||.++
T Consensus 2 ~~~i~~~i~~il~~~~~~~~~~i~~d~~l~~~g~lDSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~~l~~~i~~~ 79 (80)
T 1dv5_A 2 DEAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQA 79 (80)
T ss_dssp CHHHHHHHHHHHHHHHTSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCCcccCCCCcchhhccCcChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHHHHHHHHHHc
Confidence 568999999999999999888899999999888 999999999999999999999999986 999999999999865
No 20
>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1
Probab=99.64 E-value=1e-15 Score=109.37 Aligned_cols=81 Identities=31% Similarity=0.521 Sum_probs=75.7
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhh
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKFA-DLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKA 153 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~-dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~ 153 (156)
..++++.++|++++++.+|++.++++++++|+ |||+|||+.++++..||++||++||..++.++.|++++++||.+++.
T Consensus 3 m~~~~i~~~l~~il~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~ 82 (115)
T 1klp_A 3 VTQEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLEE 82 (115)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHhCcCHHhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHHc
Confidence 34778999999999999999999999999995 99999999999999999999999999999999999999999998876
Q ss_pred cc
Q 031600 154 AS 155 (156)
Q Consensus 154 ~~ 155 (156)
..
T Consensus 83 ~~ 84 (115)
T 1klp_A 83 EN 84 (115)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 21
>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}
Probab=99.63 E-value=1.1e-15 Score=108.39 Aligned_cols=80 Identities=33% Similarity=0.401 Sum_probs=74.5
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCc------cccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHH
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKF------ADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLI 148 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f------~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I 148 (156)
....++.++|+++++++++ +.++++++++| .|||||||+.++|+..||++||++||++++.++.|++++++||
T Consensus 15 ~~~~~i~~~i~~il~e~l~-~~~~i~~d~~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i 93 (107)
T 3ce7_A 15 TDINAVTNYIVGMCQKFLQ-KGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIADFV 93 (107)
T ss_dssp TCHHHHHHHHHHHHHTTBC-TTCCCCTTSCGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhC-CccccCCCCcccccCcccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHhcCCHHHHHHHH
Confidence 3478899999999999999 88999999999 5899999999999999999999999999999999999999999
Q ss_pred HHHhhcc
Q 031600 149 EKVKAAS 155 (156)
Q Consensus 149 ~~~~~~~ 155 (156)
.+++.+.
T Consensus 94 ~~~~~~~ 100 (107)
T 3ce7_A 94 VSERAKA 100 (107)
T ss_dssp HHHHHSC
T ss_pred HHHHHHH
Confidence 9987653
No 22
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=99.61 E-value=1.4e-15 Score=99.88 Aligned_cols=74 Identities=43% Similarity=0.715 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhh
Q 031600 80 TLQTVQSTIAKQLSIDLSAVTPDTKF-ADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKA 153 (156)
Q Consensus 80 i~~~I~~ii~~~l~~~~~~i~~d~~f-~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~ 153 (156)
+.+++++++++.++++.++++++++| .++|+|||..++++..++++||++++..++.+++|++++++||.++.+
T Consensus 2 i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~~~~ 76 (77)
T 2ehs_A 2 LEERVKEIIAEQLGVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKEKVG 76 (77)
T ss_dssp HHHHHHHHHHHHHCCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhCCChhhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHHHhc
Confidence 67889999999999988899999999 799999999999999999999999999999999999999999998753
No 23
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=99.61 E-value=8.9e-16 Score=107.50 Aligned_cols=77 Identities=31% Similarity=0.500 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCccCccc------ccCCCC-----HHHHHH
Q 031600 79 ETLQTVQSTIAKQLSIDLSAVTPDTKF-ADLGADSLDTVEIMMALEEQFGVSVGEEG------AENIAT-----VQDAAD 146 (156)
Q Consensus 79 ei~~~I~~ii~~~l~~~~~~i~~d~~f-~dLGlDSL~~veii~~iee~f~i~I~~~~------l~~~~T-----v~~l~~ 146 (156)
++.++|++++++++|++.++++++++| .|||+|||+.++++..||++||++||.++ +.++.| |+++++
T Consensus 3 ~i~~~v~~ii~~~l~~~~~~i~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~~~~~~~T~~~~Tv~~l~~ 82 (101)
T 2kw2_A 3 STFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAA 82 (101)
T ss_dssp CHHHHHHHHHHHHHCCCGGGCCTTCBCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSSCHHHHHBHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHhhCCCCcchHHhcCCCHHHHHHHHHHHHHHHCCccCHHHhcchhhhhhccCCCcCcHHHHHH
Confidence 588999999999999999999999999 59999999999999999999999999887 578888 999999
Q ss_pred HHHHHhhcc
Q 031600 147 LIEKVKAAS 155 (156)
Q Consensus 147 ~I~~~~~~~ 155 (156)
||.++++..
T Consensus 83 ~i~~~~~~~ 91 (101)
T 2kw2_A 83 RIDELVAAK 91 (101)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHhccc
Confidence 999987643
No 24
>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}
Probab=99.60 E-value=1.7e-15 Score=107.30 Aligned_cols=78 Identities=22% Similarity=0.376 Sum_probs=70.6
Q ss_pred ChHHHHHHHHHHHHHHhCCC--CCCCCCCCCcc-ccCC-ChHHHHHHHHHHHHHhCCccCcccc--cCCCCHHHHHHHHH
Q 031600 76 AQPETLQTVQSTIAKQLSID--LSAVTPDTKFA-DLGA-DSLDTVEIMMALEEQFGVSVGEEGA--ENIATVQDAADLIE 149 (156)
Q Consensus 76 ~~~ei~~~I~~ii~~~l~~~--~~~i~~d~~f~-dLGl-DSL~~veii~~iee~f~i~I~~~~l--~~~~Tv~~l~~~I~ 149 (156)
.+.++.++|++++++.++++ .++++++++|. |||+ |||+.++|+..||++||++||++++ .++.||+++++||.
T Consensus 21 ~~m~i~~~i~~il~e~l~~~~~~~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I~~eel~~~~~~Tv~~l~~~I~ 100 (105)
T 2lki_A 21 GHMQHLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVE 100 (105)
T ss_dssp --CCTHHHHHHHHHHHTTCTTGGGTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSCCCGGGCCGGGGSBHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCCCcccccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCCcCHHHhhHHhcCCHHHHHHHHH
Confidence 35578999999999999998 78999999998 7998 9999999999999999999999994 58999999999999
Q ss_pred HHhh
Q 031600 150 KVKA 153 (156)
Q Consensus 150 ~~~~ 153 (156)
++++
T Consensus 101 ~~~~ 104 (105)
T 2lki_A 101 HKLS 104 (105)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 8764
No 25
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=99.60 E-value=1.2e-15 Score=107.87 Aligned_cols=81 Identities=16% Similarity=0.290 Sum_probs=68.8
Q ss_pred CCChHHHHHHHHHHHHHHhCC--CCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCccccc--CCCCHHHHHHHHH
Q 031600 74 SAAQPETLQTVQSTIAKQLSI--DLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAE--NIATVQDAADLIE 149 (156)
Q Consensus 74 ~~~~~ei~~~I~~ii~~~l~~--~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~--~~~Tv~~l~~~I~ 149 (156)
...+++++++|+++++++++. +.++++++++|.|||+|||+.++|+..||++||++||++++. ++.|++.+++||.
T Consensus 17 ~~~~~~i~~~i~~il~~~l~~~v~~~~i~~d~~l~dlGlDSL~~veLv~~lE~~fgI~i~~~~l~~~~~~tv~~l~~~v~ 96 (105)
T 2jq4_A 17 LYFQGHMNATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVK 96 (105)
T ss_dssp ------CHHHHHHHHHHTSCCSSCGGGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhccCCCcccCCCCCCHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHhhhhhcCCHHHHHHHHH
Confidence 355788999999999998864 478899999999999999999999999999999999999986 8899999999998
Q ss_pred HHhhc
Q 031600 150 KVKAA 154 (156)
Q Consensus 150 ~~~~~ 154 (156)
...+.
T Consensus 97 ~~~~~ 101 (105)
T 2jq4_A 97 LILDG 101 (105)
T ss_dssp HHHHT
T ss_pred HHhcc
Confidence 87654
No 26
>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1
Probab=99.60 E-value=1.5e-15 Score=105.26 Aligned_cols=76 Identities=21% Similarity=0.343 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHhCCCCC----CCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhhcc
Q 031600 80 TLQTVQSTIAKQLSIDLS----AVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKAAS 155 (156)
Q Consensus 80 i~~~I~~ii~~~l~~~~~----~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~~~ 155 (156)
+.++|++++.++++.+.+ +++++++|.|||+|||+.++++..||++||++||.+++.++.|++++++||.+++...
T Consensus 5 t~~~l~~ii~~~l~~~~~~~~~~i~~d~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~~~ 84 (95)
T 1nq4_A 5 TLSDLLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLTGA 84 (95)
T ss_dssp CHHHHHHHHHHHHTCSSTTCSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHccccccccccCCCCCChhhhCCCHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHHHHHhcc
Confidence 456788899999887643 7999999999999999999999999999999999999999999999999999887543
No 27
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.59 E-value=3.3e-15 Score=100.42 Aligned_cols=75 Identities=23% Similarity=0.388 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHhCCC--CCCCCCCCCcc-ccCC-ChHHHHHHHHHHHHHhCCccCccccc--CCCCHHHHHHHHHHHh
Q 031600 79 ETLQTVQSTIAKQLSID--LSAVTPDTKFA-DLGA-DSLDTVEIMMALEEQFGVSVGEEGAE--NIATVQDAADLIEKVK 152 (156)
Q Consensus 79 ei~~~I~~ii~~~l~~~--~~~i~~d~~f~-dLGl-DSL~~veii~~iee~f~i~I~~~~l~--~~~Tv~~l~~~I~~~~ 152 (156)
++.++|++++++.++++ .++++++++|. |+|+ |||+.++++..+|++||++||.+++. ++.|++++++||.+++
T Consensus 2 ~i~~~l~~il~~~l~~~~~~~~i~~d~~l~~dlg~~DSl~~~elv~~lE~~fgi~i~~~~l~~~~~~Tv~~l~~~i~~~~ 81 (83)
T 2amw_A 2 QHLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKL 81 (83)
T ss_dssp CTHHHHHHHHHHHTTCGGGGGSCCTTSCSTTTSTTTTHHHHHHHHHHHHHHTTCCCCTTTCCGGGSSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCCccccCCCcchhhhccCccCHHHHHHHHHHHHHHhCCeeCHHhhhHHhcCCHHHHHHHHHHHh
Confidence 36788999999999998 78999999998 8998 99999999999999999999999975 4999999999999876
Q ss_pred h
Q 031600 153 A 153 (156)
Q Consensus 153 ~ 153 (156)
+
T Consensus 82 ~ 82 (83)
T 2amw_A 82 S 82 (83)
T ss_dssp C
T ss_pred c
Confidence 3
No 28
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=99.58 E-value=2.8e-16 Score=105.42 Aligned_cols=76 Identities=26% Similarity=0.414 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHhCCCCC-CCC--CCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhhc
Q 031600 79 ETLQTVQSTIAKQLSIDLS-AVT--PDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKAA 154 (156)
Q Consensus 79 ei~~~I~~ii~~~l~~~~~-~i~--~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~~ 154 (156)
.+.+.|++++++.++++.+ +++ ++++|.|||+|||+.++++..||++||++||..++.++.|++++++||.+++++
T Consensus 4 ~~~~~l~~~l~~~l~~~~~~~i~~~~~~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~~ 82 (83)
T 1or5_A 4 LTVDDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTPAT 82 (83)
T ss_dssp SCHHHHHHHHHHHSCCCSSCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCCCcHHHhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHHHHhcC
Confidence 3678899999999999876 898 899999999999999999999999999999999999999999999999876643
No 29
>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}
Probab=99.36 E-value=1.3e-16 Score=112.56 Aligned_cols=77 Identities=23% Similarity=0.390 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhhcc
Q 031600 79 ETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKAAS 155 (156)
Q Consensus 79 ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~~~ 155 (156)
++.++|+++++++++++.++++++++|.|||+|||+.++|+..||++||++||..++.++.||+++++||.++++++
T Consensus 26 ei~~~l~~ila~~l~i~~~~I~~d~~l~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l~~~I~~~~~~g 102 (103)
T 2lte_A 26 DMEDHLLTVLSVASGVPKEEISRDSRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHRAAG 102 (103)
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999988654
No 30
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=99.58 E-value=1.1e-14 Score=97.69 Aligned_cols=78 Identities=17% Similarity=0.207 Sum_probs=73.9
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
....++++.++++++++++++.++++.+.+|+++|+|||..+++...++++||++++..++.+++|++++++||.+++
T Consensus 10 ~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~~~~ 87 (88)
T 2afd_A 10 ASVEDIQSWLIDQFAQQLDVDPDDIDMEESFDNYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGELY 87 (88)
T ss_dssp SSHHHHHHHHHHHHHHHHTSCGGGCCTTSCGGGTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHCcCHHHcCCCCCHHHcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 457789999999999999998888999999999999999999999999999999999999999999999999998765
No 31
>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}
Probab=99.57 E-value=2.4e-16 Score=104.46 Aligned_cols=75 Identities=45% Similarity=0.726 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 78 PETLQTVQSTIAKQLSIDLSAVTPDTKF-ADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 78 ~ei~~~I~~ii~~~l~~~~~~i~~d~~f-~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
+++.+++++++++.++++.++++++++| .++|+|||+.++++..+|++||+++|..++.+++|++++++||.+++
T Consensus 3 ~~i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 78 (79)
T 2l3v_A 3 SDTAERVKKIVVEHLGVDADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKFIDKAS 78 (79)
T ss_dssp THHHHHHHHHHHHHTCCCSTTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCCCHhhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 4789999999999999998999999999 79999999999999999999999999999999999999999998765
No 32
>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}
Probab=99.56 E-value=2.8e-15 Score=107.58 Aligned_cols=74 Identities=24% Similarity=0.369 Sum_probs=66.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhhcc
Q 031600 77 QPETLQTVQSTIAKQLSIDLSAVTPDTKF-ADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKAAS 155 (156)
Q Consensus 77 ~~ei~~~I~~ii~~~l~~~~~~i~~d~~f-~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~~~ 155 (156)
++++.++|++++++.++ +++++.| .|||+|||+.++|+..||++||++|+++++.++.||+++++||.+++++.
T Consensus 28 ~~ei~~~v~~il~e~l~-----I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~~e~l~~~~TV~dlv~~I~~~l~~~ 102 (113)
T 2cgq_A 28 EEAINATIQRILRTDRG-----ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWFPET 102 (113)
T ss_dssp HHHHHHHHHHHHTCCSC-----CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCBHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHhC-----CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcCHHHHHhCCCHHHHHHHHHHHHhcc
Confidence 56788999999988887 8899999 59999999999999999999999999999999999999999999876543
No 33
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=99.54 E-value=1.5e-14 Score=97.74 Aligned_cols=76 Identities=28% Similarity=0.431 Sum_probs=72.1
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCc--ccccCCCCHHHHHHHHHH
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGE--EGAENIATVQDAADLIEK 150 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~--~~l~~~~Tv~~l~~~I~~ 150 (156)
....++.+.|+++++++++++.++++++++|++||+|||..+++...++++||++++. .++.+++|++++++||.+
T Consensus 7 ~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~~ 84 (89)
T 2kr5_A 7 GVSNEKLDAVMRVVSEESGIALEELTDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLG 84 (89)
T ss_dssp CCCHHHHHHHHHHHHHHHCCCGGGCCTTCBHHHHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHHHHCcCHHHCCCCCCHHHcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHHH
Confidence 4467899999999999999998899999999999999999999999999999999999 999999999999999986
No 34
>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}
Probab=99.52 E-value=2.7e-14 Score=98.06 Aligned_cols=76 Identities=21% Similarity=0.287 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhhc
Q 031600 77 QPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKAA 154 (156)
Q Consensus 77 ~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~~ 154 (156)
..++++.|.+++++++|++ +++.+++|+++|+|||..++++.+|+++||++++..++++++|+++++++|.+....
T Consensus 14 ~~~~e~~l~~i~~~vL~~~--~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~~~~ 89 (93)
T 4i4d_A 14 RRALERDIAAIWAETLGRD--SVGPHEDFAALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHATLTG 89 (93)
T ss_dssp HHHHHHHHHHHHHHHHTCS--CCCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHhCCC--CCCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHHccc
Confidence 6789999999999999984 599999999999999999999999999999999999999999999999999987654
No 35
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=99.51 E-value=2.3e-14 Score=98.14 Aligned_cols=80 Identities=21% Similarity=0.348 Sum_probs=75.3
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhhc
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKAA 154 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~~ 154 (156)
....++.+.++++++++++++.++++.+.+|+++|+|||..+++...++++||++++..++.+++|++++++||.+++..
T Consensus 17 ~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~~~~ 96 (99)
T 2liu_A 17 VNLSEIKQVLKQQLAEALYTEESEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQILSS 96 (99)
T ss_dssp CCHHHHHHHHHHHHHHHTTSCGGGCCSSSCHHHHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCcCHHHcCCCCCHHHhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHhhc
Confidence 45788999999999999999888999999999999999999999999999999999999999999999999999988754
No 36
>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A
Probab=99.51 E-value=3.3e-14 Score=97.49 Aligned_cols=76 Identities=12% Similarity=0.179 Sum_probs=70.3
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHH
Q 031600 74 SAAQPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKV 151 (156)
Q Consensus 74 ~~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~ 151 (156)
..+..++++.|.+++++++|++ .++.+++|+++|+|||..++++.+|+++||++++..++.+.+|+++++++|.+.
T Consensus 9 ~~p~~~~e~~l~~i~~~vL~~~--~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~~~ 84 (91)
T 1dny_A 9 VAPTNAVESKLAEIWERVLGVS--GIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATR 84 (91)
T ss_dssp CCCSSHHHHHHHHHHHHHHTCS--SCCSSCCTTSSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC-
T ss_pred CCCCCHHHHHHHHHHHHHhCCC--CCCCCCCHHHcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 3557789999999999999985 699999999999999999999999999999999999999999999999999754
No 37
>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1
Probab=99.50 E-value=8.9e-16 Score=105.53 Aligned_cols=78 Identities=22% Similarity=0.423 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHhCC--------CCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccC---cccccCCCCHHHHHHH
Q 031600 79 ETLQTVQSTIAKQLSI--------DLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVG---EEGAENIATVQDAADL 147 (156)
Q Consensus 79 ei~~~I~~ii~~~l~~--------~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~---~~~l~~~~Tv~~l~~~ 147 (156)
++.++|+++++++++. +.++++++++|.|||+|||+.++++..||++||++|| ..++.++.|++++++|
T Consensus 4 ~i~~~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l~~~ 83 (92)
T 1fh1_A 4 QLTLEIISAINKLVKAENGERTSVALGEITTDTELTSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVEA 83 (92)
T ss_dssp -CHHHHHHHHHHHC----------------------------CTTTTHHHHHHHC-----------------CTTTSTHH
T ss_pred HHHHHHHHHHHHHHHhccccccCCCHhhCCCCCCHhhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHHHHH
Confidence 5678888999998874 4458999999999999999999999999999999999 7788999999999999
Q ss_pred HHHHhhccC
Q 031600 148 IEKVKAASA 156 (156)
Q Consensus 148 I~~~~~~~a 156 (156)
|.+++++.|
T Consensus 84 i~~~~~~~a 92 (92)
T 1fh1_A 84 VRGLLTKEV 92 (92)
T ss_dssp HHC------
T ss_pred HHHHhhccC
Confidence 998877653
No 38
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=99.49 E-value=3e-14 Score=97.33 Aligned_cols=76 Identities=24% Similarity=0.280 Sum_probs=71.4
Q ss_pred hHHHHHHHHHHHHHHhC-CCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 77 QPETLQTVQSTIAKQLS-IDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 77 ~~ei~~~I~~ii~~~l~-~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
...+.+.|+++++++++ .+.++++.+++|+++|+|||+.+++...++++||++++..++.+++|++++++||.+++
T Consensus 18 ~~~~~~~l~~~~~~~l~~~~~~~i~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~l 94 (95)
T 2ju1_A 18 TAELVRLVRTSTATVLGHDDPKAVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAEL 94 (95)
T ss_dssp HHHHHHHHHHHHHHHTTCCCGGGCCSSSCHHHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCChhhCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHHHc
Confidence 45688899999999999 67788999999999999999999999999999999999999999999999999998875
No 39
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.41 E-value=2.7e-13 Score=105.44 Aligned_cols=79 Identities=14% Similarity=0.272 Sum_probs=74.9
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhh
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKA 153 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~ 153 (156)
....++.+.|+++++++++++.++++.+.+|++||+|||+.+++...|+++||++++...+.+++|++++++||.++..
T Consensus 22 ~~~~~i~~~l~~~~a~~l~~~~~~i~~~~~f~~lG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~l~~~~~ 100 (212)
T 2l22_A 22 VADDECAQFLRQSLAAMLYCEPGQIRDGSRFLELGLDSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQWVGTQLQ 100 (212)
T ss_dssp CCTTHHHHHHHHHHHHHTTCCTTSCCTTCBHHHHTCCHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHHHHCcCHHHcCCCCCHHHhCCcHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHhcc
Confidence 5578899999999999999999999999999999999999999999999999999999999999999999999987654
No 40
>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A
Probab=99.40 E-value=5.4e-13 Score=92.26 Aligned_cols=69 Identities=29% Similarity=0.461 Sum_probs=62.9
Q ss_pred HHHHHHHHHHhCCC-CCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHH
Q 031600 82 QTVQSTIAKQLSID-LSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKV 151 (156)
Q Consensus 82 ~~I~~ii~~~l~~~-~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~ 151 (156)
+.|++.+++++|++ .++++++..|.|||+|||+.|||.+.|+++||+++|..+++.+ |+++|++++...
T Consensus 9 ~~v~~~va~iLg~~~~~~I~~~~~l~dLG~DSL~aVELr~~Le~~fgi~lp~~~l~~~-Ti~~La~~v~~~ 78 (91)
T 2cg5_B 9 RDLVEAVAHILGIRDLAAVNLDSSLADLGLDALMSVEVRQTLERELNLVLSVREVRQL-TLRKLQELSSKA 78 (91)
T ss_dssp TTHHHHHHHHTTCCSCTTSCTTSBTTTTTCCHHHHHHHHHHHHHHHCCCCCHHHHHTC-BHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCchhhCCCCCCHHHhCCcchHHHHHHHHHHHHHCCCCCHHHHHhC-CHHHHHHHHhcc
Confidence 46889999999996 5899999999999999999999999999999999999999875 999999988743
No 41
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.37 E-value=2.4e-12 Score=100.08 Aligned_cols=78 Identities=17% Similarity=0.325 Sum_probs=73.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHhhc
Q 031600 77 QPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVKAA 154 (156)
Q Consensus 77 ~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~~~ 154 (156)
+..+.+.|+++++++++++.++++.+++|+++|+|||+.++++..|+++||++++..++++++|+++|++||.+++..
T Consensus 128 ~~~i~~~l~~~~~~~l~~~~~~i~~~~~f~~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~~~~~~ 205 (212)
T 2l22_A 128 RESIQDYLKQSLGELLFLDPGQLRSGAQFLDLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVDRRVQL 205 (212)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSSCCSSCCGGGGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHCCChhhCCCCCCHHHhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHhcc
Confidence 577899999999999999989999999999999999999999999999999999999999999999999999887643
No 42
>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=3.3e-12 Score=91.18 Aligned_cols=78 Identities=23% Similarity=0.274 Sum_probs=71.5
Q ss_pred CCChHHHHHHHHHHHHHHhC-CCCCCCCCCCCccccCCChHHHHHHHHHHHHHhC-CccCcccccCCCCHHHHHHHHHHH
Q 031600 74 SAAQPETLQTVQSTIAKQLS-IDLSAVTPDTKFADLGADSLDTVEIMMALEEQFG-VSVGEEGAENIATVQDAADLIEKV 151 (156)
Q Consensus 74 ~~~~~ei~~~I~~ii~~~l~-~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~-i~I~~~~l~~~~Tv~~l~~~I~~~ 151 (156)
...+.++++.|.++|.++|+ + ..++.+++|+++|.|||.++.++.+|+++|+ ++++..+++..+|+++++++|.++
T Consensus 20 t~~~~~~E~~La~iW~~vL~~~--~~i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~~~ 97 (110)
T 2cq8_A 20 TEAELVTAEAVRSVWQRILPKV--LEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRK 97 (110)
T ss_dssp CTTHHHHHHHHHHHHHHHCSSC--SCCCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHH
T ss_pred cCcchHHHHHHHHHHHHHhCCC--CCCCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 35577899999999999998 5 4599999999999999999999999999999 999999999999999999999877
Q ss_pred hh
Q 031600 152 KA 153 (156)
Q Consensus 152 ~~ 153 (156)
+.
T Consensus 98 ~~ 99 (110)
T 2cq8_A 98 LR 99 (110)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 43
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=99.14 E-value=8.9e-11 Score=95.66 Aligned_cols=77 Identities=19% Similarity=0.263 Sum_probs=70.3
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 74 SAAQPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 74 ~~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
..+++++++.|.++++++||++. ++.+++|+++|+|||..++++.+|+++||++++..++++.+|+++++++|....
T Consensus 6 ~~p~~~~e~~l~~~~~~~l~~~~--i~~~~~ff~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~~~ 82 (329)
T 3tej_A 6 RAPKAGSETIIAAAFSSLLGCDV--QDADADFFALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAEE 82 (329)
T ss_dssp CCCCTTHHHHHHHHHHHHHTC-C--CSTTCBTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHSCT
T ss_pred CCCCCHHHHHHHHHHHHHhCCCC--CCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHhhc
Confidence 35577899999999999999875 899999999999999999999999999999999999999999999999998543
No 44
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.98 E-value=1e-09 Score=93.90 Aligned_cols=77 Identities=18% Similarity=0.243 Sum_probs=71.5
Q ss_pred cCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHH
Q 031600 73 CSAAQPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKV 151 (156)
Q Consensus 73 ~~~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~ 151 (156)
+..+..++++.|.++++++||++ .++.+++|++||+|||..++++.+++++||++++..++.+.+|++++++++...
T Consensus 4 ~~~p~~~~e~~l~~iw~~vL~~~--~i~~~d~ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~~~~ 80 (520)
T 2jgp_A 4 YVAPRSVWEARLAQVWEQVLNVP--QVGALDDFFALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEET 80 (520)
T ss_dssp CCCCCSHHHHHHHHHHHHHHTCS--CCCTTCBTTTTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHHC
T ss_pred cCCCCCHHHHHHHHHHHHHhCCC--CCCCCccHHHhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhh
Confidence 34667889999999999999986 599999999999999999999999999999999999999999999999999754
No 45
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=98.73 E-value=1.2e-09 Score=93.99 Aligned_cols=77 Identities=22% Similarity=0.320 Sum_probs=0.0
Q ss_pred cCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 73 CSAAQPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 73 ~~~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
+..+..++++.|.++++++||++ .++.+++|+++|.|||..++++.+|++ ||++++..++++.+|+++++++|.+..
T Consensus 39 ~~~p~~~~e~~l~~~w~~~l~~~--~i~~~~~ff~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~~ 115 (508)
T 4f6l_B 39 YSEPSNEIEQTFVDVFGEVLKQN--DVGVDDDFFELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQNQ 115 (508)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCHHHHHHHHHHHHHhCCC--CCCCCCChHHcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhhc
Confidence 34667889999999999999986 599999999999999999999999986 999999999999999999999998654
No 46
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.68 E-value=2.4e-08 Score=94.77 Aligned_cols=78 Identities=12% Similarity=0.184 Sum_probs=71.5
Q ss_pred cCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 73 CSAAQPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 73 ~~~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
+..++.++++.|.++++++||++ .++.+++|++||.|||..++++.+|+++||++++..++++.+|+++|+++|....
T Consensus 966 ~~~p~~~~e~~l~~~~~~vL~~~--~i~~~~~ff~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~~~ 1043 (1304)
T 2vsq_A 966 WIGPRNEMEETIAQIWSEVLGRK--QIGIHDDFFALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKNGG 1043 (1304)
T ss_dssp CCCCSSHHHHHHHHHHHHHHTCS--CCCTTCCTTTTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHHTT
T ss_pred ccCCCChHHHHHHHHHHHHcCCC--ccCCCCCHHHhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHhcC
Confidence 34567889999999999999985 5999999999999999999999999999999999999999999999999997643
No 47
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=98.62 E-value=2.3e-08 Score=81.00 Aligned_cols=66 Identities=14% Similarity=0.107 Sum_probs=62.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHH
Q 031600 82 QTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIE 149 (156)
Q Consensus 82 ~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~ 149 (156)
+++++.+++.+ ++.+++.++.+|.++|+||+..+.++..++++ |++++..++.+.+|++++++++.
T Consensus 218 dwlr~~va~~L-~~~~~i~~~~nL~~lGlDSi~~m~l~~~~~~~-g~~~~~~~l~~~ptl~~~~~~l~ 283 (287)
T 2fq1_A 218 AALREVILPLL-DESDEPFDDDNLIDYGLDSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKLLS 283 (287)
T ss_dssp HHHHHHHGGGC-CCSSCCCTTSCSGGGTCCTTHHHHHHHHHTTT-CTTCCHHHHHTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCHhhcCCCCCHHHhCccHHHHHHHHHHHHHc-CCCCCHHHHHhCccHHHHHHHHH
Confidence 56888999999 88889999999999999999999999999998 99999999999999999999997
No 48
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=98.56 E-value=7.8e-09 Score=91.45 Aligned_cols=76 Identities=13% Similarity=0.170 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHH-HhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEE-QFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee-~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
...++.++.+.++++++||++ .++.+++|++||.|||..+.++.+|++ .||++++..++++.+|+++|+++|.+..
T Consensus 520 ~~~~~~e~~l~~iw~~vL~~~--~~~~~d~Ff~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l~~~~ 596 (620)
T 4dg8_A 520 SALDPDQRGCAQLWSELLGCE--VGAADQDFFLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSHG 596 (620)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHhCCC--CCCCCCChhhccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHHHhcC
Confidence 345678889999999999985 478899999999999999999999999 8999999999999999999999998653
No 49
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=98.42 E-value=1.6e-07 Score=82.40 Aligned_cols=72 Identities=13% Similarity=0.094 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHHh
Q 031600 79 ETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKVK 152 (156)
Q Consensus 79 ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~~ 152 (156)
..++.+.+++.++++. .+.+..+++|++||+|||..+++..+|++ ++++++..++++++|+++|+++|.+.+
T Consensus 545 ~~~~~l~~~~~~~l~~-~~~~~~~d~Ff~lGgdSl~a~~l~~~l~~-~~~~~~~~~~~~~pti~~la~~l~~~~ 616 (617)
T 3rg2_A 545 ASKAALREVILPLLDE-SDEPFDDDNLIDYGLDSVRMMALAARWRK-VHGDIDFVMLAKNPTIDAWWKLLSREV 616 (617)
T ss_dssp CSHHHHHHHHGGGSCT-TCCCCTTSCGGGGTCCHHHHHHHHHHHHT-TSTTCCHHHHHHSCCHHHHHHHHCC--
T ss_pred ccHHHHHHHHHHHhcc-CCCCCCCCChhhcCccHHHHHHHHHHHHH-hcCCCCHHHHhcCCCHHHHHHHHHhhc
Confidence 3466788889998874 34688899999999999999999999987 789999999999999999999997654
No 50
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.71 E-value=4.7e-06 Score=84.09 Aligned_cols=71 Identities=24% Similarity=0.416 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCC-CCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHHH
Q 031600 80 TLQTVQSTIAKQLSID-LSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEKV 151 (156)
Q Consensus 80 i~~~I~~ii~~~l~~~-~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~~ 151 (156)
.++.+.++++++|+++ .++++.+++|+|||+|||+.+||...|+++||++++..++.+ .|+..+++++...
T Consensus 2124 ~~~~l~~~~a~vL~~~~~~~i~~~~~~~~lG~DSL~avelr~~i~~~~~~~l~~~~i~~-~t~~~la~~~~~~ 2195 (2512)
T 2vz8_A 2124 SQKDLVKAVAHILGIRDVASINPDSTLVDLGLDSLMGVEVRQILEREHDLVLSMREVRQ-LSLRKLQELSSKT 2195 (2512)
T ss_dssp -------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHhCCCcccccCCCCchHHhCcchHHHHHHHHHHHHHhCCcccHHHHHh-hhHHHHHHHHhhc
Confidence 3467889999999986 578999999999999999999999999999999999999877 7888888877643
No 51
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=84.91 E-value=0.18 Score=52.40 Aligned_cols=54 Identities=7% Similarity=0.157 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCcccc-CCChHHHHHHHHHHHHHhCCccCcc
Q 031600 80 TLQTVQSTIAKQLSIDLSAVTPDTKFADL-GADSLDTVEIMMALEEQFGVSVGEE 133 (156)
Q Consensus 80 i~~~I~~ii~~~l~~~~~~i~~d~~f~dL-GlDSL~~veii~~iee~f~i~I~~~ 133 (156)
..+.++.+++..++...++|..+.++.+| |.+|....||+..|..+||..+|+.
T Consensus 1795 a~~~~~~liA~~~k~~~~~i~~~~~i~~L~gg~St~~nell~dl~~efg~~~p~~ 1849 (3089)
T 3zen_D 1795 AADATVALIALSAKMRIDQIEALDSIESITDGASSRRNQLLVDLGSELNLGAIDG 1849 (3089)
T ss_dssp -------------------------------------------------------
T ss_pred HHHHHHHHHHHHhCCChhHCCccccHHHHhCCchHHHHHHHHHHHHHhCCCCCCc
Confidence 45668899999999999999999999988 9999999999999999999876644
No 52
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=78.40 E-value=0.09 Score=41.59 Aligned_cols=43 Identities=16% Similarity=0.173 Sum_probs=29.8
Q ss_pred cCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhC
Q 031600 73 CSAAQPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFG 127 (156)
Q Consensus 73 ~~~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~ 127 (156)
+.++++++++.|.++++++||++. +++|+|| +.++.+|++.|.
T Consensus 22 ~~~P~~~~E~~la~iw~~vL~~~~-----~d~Ff~l-------~~l~~~~~~~f~ 64 (319)
T 2hfk_A 22 SGADTGAGAGMFRALFRQAVEDDR-----YGEFLDV-------LAEASAFRPQFA 64 (319)
T ss_dssp --------CCHHHHHHHHHHHTTC-----HHHHHHH-------HHHHHTTSCEEC
T ss_pred CCCCCCchHHHHHHHHHHHHcCCc-----hHHHHHH-------HHHHHHHHHhcC
Confidence 456788899999999999999874 8899998 788888876653
No 53
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=58.66 E-value=9.9 Score=21.59 Aligned_cols=18 Identities=33% Similarity=0.647 Sum_probs=15.7
Q ss_pred hHHHHHHHHHHHHHhCCc
Q 031600 112 SLDTVEIMMALEEQFGVS 129 (156)
Q Consensus 112 SL~~veii~~iee~f~i~ 129 (156)
=+...|++..+|++||++
T Consensus 15 vlE~~eLvk~leekfGVs 32 (40)
T 1dd4_C 15 VSELAELVKKLEDKFGVT 32 (40)
T ss_dssp HHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHCCC
Confidence 466789999999999996
No 54
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=45.60 E-value=17 Score=19.31 Aligned_cols=15 Identities=33% Similarity=0.689 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHhC
Q 031600 113 LDTVEIMMALEEQFG 127 (156)
Q Consensus 113 L~~veii~~iee~f~ 127 (156)
+...|++..+|++||
T Consensus 16 lEl~eLvk~lEe~fG 30 (30)
T 1zav_U 16 SELAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhC
Confidence 567889999999997
No 55
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=42.85 E-value=62 Score=32.57 Aligned_cols=68 Identities=19% Similarity=0.312 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCcccc-CCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHHHHHHH
Q 031600 80 TLQTVQSTIAKQLSIDLSAVTPDTKFADL-GADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAADLIEK 150 (156)
Q Consensus 80 i~~~I~~ii~~~l~~~~~~i~~d~~f~dL-GlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~~ 150 (156)
-.+.|+.+++..+....++|.....+.+| |.-|-..-||+..|..+||. +|+.- +-..+++|...++.
T Consensus 147 a~~~~~~l~a~~~k~~~~~i~~~~~i~~l~~g~st~~ne~~gdl~~ef~~-~~~~~--e~~~l~~l~~~~~~ 215 (1887)
T 2uv8_A 147 ASLLLHVLVAHKLKKSLDSIPMSKTIKDLVGGKXTVQNEILGDLGKEFGT-TPEKP--EETPLEELAETFQD 215 (1887)
T ss_dssp HHHHHHHHHHHTTTSCTTTCCTTSCHHHHHTTCHHHHHHHHHHHHHHHCC-CCSCT--TTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCChhhCCccccHHHHhCChhhhhhHHHHHHHHHhcc-CCCcc--ccCCHHHHHHHHHh
Confidence 55678899999999999999999999987 88888889999999999998 55422 34456666655543
No 56
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=40.30 E-value=24 Score=22.26 Aligned_cols=42 Identities=14% Similarity=0.256 Sum_probs=28.9
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHh-CCccCcc
Q 031600 75 AAQPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQF-GVSVGEE 133 (156)
Q Consensus 75 ~~~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f-~i~I~~~ 133 (156)
.+..++...|.+++++. + ++++..=.+...++++| |+++...
T Consensus 12 Psd~ei~~~I~~IL~~a---D--------------L~tvT~K~VR~~Le~~~pg~dLs~k 54 (70)
T 1q1v_A 12 PTDEELKETIKKLLASA---N--------------LEEVTMKQICKKVYENYPTYDLTER 54 (70)
T ss_dssp CCHHHHHHHHHHHHTTS---C--------------GGGCCHHHHHHHHHHHCSSSCCSHH
T ss_pred cCHHHHHHHHHHHHHhC---C--------------HHHHhHHHHHHHHHHHccCCCChHH
Confidence 34666777777666532 2 34455678999999999 9988753
No 57
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=31.82 E-value=46 Score=20.88 Aligned_cols=25 Identities=16% Similarity=0.121 Sum_probs=18.2
Q ss_pred HHHHHHhCCccCcccccCCCCHHHHHHH
Q 031600 120 MALEEQFGVSVGEEGAENIATVQDAADL 147 (156)
Q Consensus 120 ~~iee~f~i~I~~~~l~~~~Tv~~l~~~ 147 (156)
..+++.||+++|.+ ++.|++.++-.
T Consensus 20 ~dl~~~l~~~l~~~---~~~Tl~G~i~~ 44 (81)
T 3lae_A 20 RDLNKMFNWELDTE---DARTFNGLILE 44 (81)
T ss_dssp HHHHHHHCCCCCCS---SCSBHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CCccHHHHHHH
Confidence 35778899998853 56788887643
No 58
>3s93_A Tudor domain-containing protein 5; structural genomics consortium, SGC, transcription; 2.28A {Homo sapiens}
Probab=31.23 E-value=1.2e+02 Score=20.32 Aligned_cols=54 Identities=9% Similarity=0.015 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCccCcccccCCCCHHHHH
Q 031600 77 QPETLQTVQSTIAKQLSIDLSAVTPDTKFADLGADSLDTVEIMMALEEQFGVSVGEEGAENIATVQDAA 145 (156)
Q Consensus 77 ~~ei~~~I~~ii~~~l~~~~~~i~~d~~f~dLGlDSL~~veii~~iee~f~i~I~~~~l~~~~Tv~~l~ 145 (156)
++++.+.|..++..++--....++ .-+|...-.+..|..||...+ .+.|+.++.
T Consensus 5 ~~~~l~~vkk~irslLiS~K~gvt--------------l~~L~~dYr~~~G~~iP~r~l-Gy~sl~~fL 58 (102)
T 3s93_A 5 QERIQECLRKEIRSLLISTKDGLS--------------PQELEKEYLLMVGNHLPLRIL-GYRSTMELV 58 (102)
T ss_dssp HHHHHHHHHHHHHHHHHSSSSCBC--------------HHHHHHHHHHHHSSCCCTGGG-TCSSHHHHH
T ss_pred HHHHHHHHHHHHHHhheeCCCCcC--------------HHHHHHHHHHHcCCcCCchhc-CcCCHHHHH
Confidence 556777777777777633322222 345555555566666666555 555555544
No 59
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=30.94 E-value=47 Score=21.03 Aligned_cols=30 Identities=20% Similarity=0.206 Sum_probs=20.0
Q ss_pred HHHHHHhCCc-cCcccccCCCCHHHHHHHHH
Q 031600 120 MALEEQFGVS-VGEEGAENIATVQDAADLIE 149 (156)
Q Consensus 120 ~~iee~f~i~-I~~~~l~~~~Tv~~l~~~I~ 149 (156)
..+++.||++ +|.++-.++.|++.++-...
T Consensus 20 ~dl~~~l~~~~l~~~~~~~~~Tl~G~i~~~l 50 (86)
T 2pls_A 20 PELKDTLGLRAVPEEEKGVYHTLSGMIMWLL 50 (86)
T ss_dssp HHHHHHHTCSCCTTTTSCSCCBHHHHHHHHH
T ss_pred HHHHHHhCCCcCCCccCCCcccHHHHHHHHh
Confidence 4467789998 87632236789888765433
No 60
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=29.97 E-value=49 Score=21.04 Aligned_cols=26 Identities=15% Similarity=0.139 Sum_probs=18.6
Q ss_pred HHHHHHhCCccCcccccCCCCHHHHHHHH
Q 031600 120 MALEEQFGVSVGEEGAENIATVQDAADLI 148 (156)
Q Consensus 120 ~~iee~f~i~I~~~~l~~~~Tv~~l~~~I 148 (156)
..+++.||+++|.+ .+.|++.++-..
T Consensus 19 ~dl~~~l~~~l~~~---~~dTl~G~v~~~ 44 (87)
T 2rk5_A 19 NDFNEYFETDLESD---NVDTIAGFYLTG 44 (87)
T ss_dssp HHHHHHHTCCCCCT---TCCBHHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CcccHHHHHHHH
Confidence 45678899988863 578888876443
No 61
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=29.84 E-value=51 Score=20.80 Aligned_cols=26 Identities=23% Similarity=0.279 Sum_probs=18.9
Q ss_pred HHHHHHhCCccCcccccCCCCHHHHHHHH
Q 031600 120 MALEEQFGVSVGEEGAENIATVQDAADLI 148 (156)
Q Consensus 120 ~~iee~f~i~I~~~~l~~~~Tv~~l~~~I 148 (156)
..+++.||+++|.+ ++.|++.++-..
T Consensus 20 ~dl~~~l~~~l~~~---~~~Tl~G~i~~~ 45 (83)
T 3llb_A 20 DAFNDFFGSEFSDE---EFDTVGGLVMSA 45 (83)
T ss_dssp HHHHHHHCCCCCTT---TCSBHHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CCcCHHHHHHHH
Confidence 45778899998853 567998876543
No 62
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=29.65 E-value=43 Score=21.74 Aligned_cols=31 Identities=16% Similarity=0.152 Sum_probs=16.8
Q ss_pred HHHHHHHhCCccCcccccCCCCHHHHHHHHH
Q 031600 119 MMALEEQFGVSVGEEGAENIATVQDAADLIE 149 (156)
Q Consensus 119 i~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~ 149 (156)
+..+++.||+++|.++-..+.|++.++-...
T Consensus 28 l~dl~~~l~~~l~~~~~~~~dTlgG~i~~~l 58 (94)
T 2oai_A 28 IEELREVLGAELPDGEENNYHTLAGMCISYF 58 (94)
T ss_dssp HHHHHHHHTC-------CCCSBHHHHHHHHH
T ss_pred HHHHHHHhCCCCCcccCCCCccHHHHHHHHh
Confidence 3457788999988632236789988875443
No 63
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=29.42 E-value=50 Score=22.02 Aligned_cols=27 Identities=15% Similarity=0.084 Sum_probs=19.2
Q ss_pred HHHHHHhCCccCcccccCCCCHHHHHHHHH
Q 031600 120 MALEEQFGVSVGEEGAENIATVQDAADLIE 149 (156)
Q Consensus 120 ~~iee~f~i~I~~~~l~~~~Tv~~l~~~I~ 149 (156)
..+++.||+++|.+ ++.|+++++-...
T Consensus 23 ~dl~~~lg~~l~~e---~~dTlgGli~~~l 49 (101)
T 2p3h_A 23 DEVERAIGYELPEG---DYETISGLLFDHA 49 (101)
T ss_dssp HHHHHHHTSCCCCS---SCCBHHHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CCccHHHHHHHHh
Confidence 45678899998863 5789888765433
No 64
>2ftc_E L12MT, MRP-L12, 39S ribosomal protein L12, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=27.73 E-value=61 Score=23.18 Aligned_cols=17 Identities=12% Similarity=0.311 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHhCCc
Q 031600 113 LDTVEIMMALEEQFGVS 129 (156)
Q Consensus 113 L~~veii~~iee~f~i~ 129 (156)
|...+|+..|+++||+.
T Consensus 16 lE~~eLv~~leekfgv~ 32 (137)
T 2ftc_E 16 LEISDLNELLKKTLKIQ 32 (137)
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 44567777777777775
No 65
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=26.57 E-value=62 Score=20.74 Aligned_cols=27 Identities=15% Similarity=0.168 Sum_probs=19.3
Q ss_pred HHHHHHHhCCccCcccccCCCCHHHHHHHH
Q 031600 119 MMALEEQFGVSVGEEGAENIATVQDAADLI 148 (156)
Q Consensus 119 i~~iee~f~i~I~~~~l~~~~Tv~~l~~~I 148 (156)
+..+++.||+++|.+ .+.|++.++-..
T Consensus 28 l~dl~~~l~~~l~~~---~~dTlgG~i~~~ 54 (91)
T 2pli_A 28 IEDINTFFGTEYSSE---EADTIGGLVIQE 54 (91)
T ss_dssp HHHHHHHHCCCCCCS---SCCBHHHHHHHH
T ss_pred HHHHHHHhCCCCCCC---CCccHHHHHHHH
Confidence 345678899998863 578998876543
No 66
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=26.38 E-value=61 Score=20.77 Aligned_cols=27 Identities=11% Similarity=0.119 Sum_probs=19.2
Q ss_pred HHHHHHHhCCccCcccccCCCCHHHHHHHH
Q 031600 119 MMALEEQFGVSVGEEGAENIATVQDAADLI 148 (156)
Q Consensus 119 i~~iee~f~i~I~~~~l~~~~Tv~~l~~~I 148 (156)
+..+++.||+++|.+ .+.|++.++-..
T Consensus 26 l~dl~~~l~~~l~~~---~~~TlgG~i~~~ 52 (93)
T 2r2z_A 26 IDEFNEVFETDLHMS---DVDTMAGYLITA 52 (93)
T ss_dssp HHHHHHHHTCCCCCT---TCCBHHHHHHHH
T ss_pred HHHHHHHhCCCCCCC---CcccHHHHHHHH
Confidence 345678899998863 578998876543
No 67
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=24.69 E-value=72 Score=20.33 Aligned_cols=29 Identities=14% Similarity=0.040 Sum_probs=19.6
Q ss_pred HHHHHHHhCCccCcccccCCCCHHHHHHHH
Q 031600 119 MMALEEQFGVSVGEEGAENIATVQDAADLI 148 (156)
Q Consensus 119 i~~iee~f~i~I~~~~l~~~~Tv~~l~~~I 148 (156)
+..+++.||+++|.+ -..+.|++.++-..
T Consensus 25 l~dl~~~l~~~l~~~-~~~~~TlgG~i~~~ 53 (90)
T 2p13_A 25 IRKASNLLEHDLVDE-AERYSTLGGYLLWQ 53 (90)
T ss_dssp HHHHHHHHTSCCCCT-TCCCCBHHHHHHHH
T ss_pred HHHHHHHHCCCCCCc-CCCCccHHHHHHHH
Confidence 345678899998862 13578998876543
No 68
>3ufe_A Transcriptional antiterminator (BGLG family); extended helix bundle, arcimboldo; 1.50A {Bacillus subtilis} PDB: 3gwh_A
Probab=23.03 E-value=53 Score=21.18 Aligned_cols=21 Identities=19% Similarity=0.264 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHhCCccCcccc
Q 031600 115 TVEIMMALEEQFGVSVGEEGA 135 (156)
Q Consensus 115 ~veii~~iee~f~i~I~~~~l 135 (156)
..++...+++.||+++|++++
T Consensus 79 a~~i~~~ie~~~~i~i~~~Ei 99 (111)
T 3ufe_A 79 AWKLIKILQQTLKKPVHEAEA 99 (111)
T ss_dssp HHHHHHHHHHHHCSCCCTHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 456778888999999998875
No 69
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=21.86 E-value=90 Score=21.05 Aligned_cols=31 Identities=19% Similarity=0.173 Sum_probs=21.8
Q ss_pred HHHHHHHhCCc--cCcccccCCCCHHHHHHHHH
Q 031600 119 MMALEEQFGVS--VGEEGAENIATVQDAADLIE 149 (156)
Q Consensus 119 i~~iee~f~i~--I~~~~l~~~~Tv~~l~~~I~ 149 (156)
+..+++.||++ +|...-..+.|++.++-...
T Consensus 45 l~dl~e~lg~~~~l~~~~~~~~dTlgGlil~~l 77 (113)
T 3ded_A 45 LDRFREFFELEAPLPGEAGGNIHTLAGVMLYQL 77 (113)
T ss_dssp HHHHHHHTTCCSCCTTGGGTCCCBHHHHHHHHH
T ss_pred HHHHHHHhCCCccCCcccCCCCccHHHHHHHHh
Confidence 34578889998 88633356789988875443
No 70
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=20.94 E-value=85 Score=19.77 Aligned_cols=27 Identities=11% Similarity=0.156 Sum_probs=18.2
Q ss_pred HHHHHHhCCc-cCcccccCCCCHHHHHHHH
Q 031600 120 MALEEQFGVS-VGEEGAENIATVQDAADLI 148 (156)
Q Consensus 120 ~~iee~f~i~-I~~~~l~~~~Tv~~l~~~I 148 (156)
..+++.||++ +|.+ .++.|++.++-..
T Consensus 20 ~dl~~~l~~~~l~~~--~~~~Tl~G~i~~~ 47 (86)
T 2p4p_A 20 EDVMRALNIHTFPRD--ENYETIGGFMMYM 47 (86)
T ss_dssp HHHHHHTTCCCSCCS--CSSCBHHHHHHHH
T ss_pred HHHHHHhCCCCCCcC--CCCccHHHHHHHH
Confidence 4467889995 8752 2578888876443
Done!