Query 031602
Match_columns 156
No_of_seqs 141 out of 1086
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 03:49:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031602.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031602hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eld_A MJ16.5-P1, small heat s 100.0 1.8E-30 6.3E-35 189.2 11.8 105 44-154 56-161 (161)
2 1gme_A Heat shock protein 16.9 100.0 3.7E-30 1.3E-34 185.8 10.0 110 41-154 40-150 (151)
3 3gla_A Low molecular weight he 100.0 2.5E-28 8.5E-33 164.7 13.0 96 43-143 3-98 (100)
4 4fei_A Heat shock protein-rela 99.9 4.2E-27 1.4E-31 159.4 11.2 95 41-145 3-97 (102)
5 3aab_A Putative uncharacterize 99.9 1.8E-27 6E-32 166.3 7.9 93 43-143 23-116 (123)
6 3l1e_A Alpha-crystallin A chai 99.9 3.4E-25 1.2E-29 151.0 12.2 98 45-154 3-105 (106)
7 2wj5_A Heat shock protein beta 99.9 1.1E-24 3.8E-29 147.2 10.4 97 46-155 3-100 (101)
8 2klr_A Alpha-crystallin B chai 99.9 2.6E-24 8.8E-29 158.5 9.7 99 45-155 64-163 (175)
9 2bol_A TSP36, small heat shock 99.9 2.2E-23 7.5E-28 165.8 13.3 98 42-154 96-198 (314)
10 3q9p_A Heat shock protein beta 99.9 4.8E-23 1.6E-27 135.0 10.4 82 49-142 2-84 (85)
11 2y1y_A Alpha-crystallin B chai 99.9 5.1E-22 1.8E-26 131.4 10.5 82 50-143 2-84 (90)
12 2bol_A TSP36, small heat shock 99.8 8.6E-21 2.9E-25 150.9 8.2 89 45-142 221-313 (314)
13 2xcm_C SGT1-like protein, cyto 99.1 2.4E-10 8.1E-15 74.9 7.7 81 44-144 2-82 (92)
14 1rl1_A Suppressor of G2 allele 99.1 2.8E-10 9.5E-15 77.6 8.2 82 43-144 8-89 (114)
15 2k8q_A Protein SHQ1; beta-sand 98.6 2.6E-07 8.9E-12 64.4 8.0 78 43-145 2-84 (134)
16 3eud_A Protein SHQ1; CS domain 98.5 3E-06 1E-10 57.3 12.0 80 41-145 14-98 (115)
17 3igf_A ALL4481 protein; two-do 98.4 7.9E-07 2.7E-11 72.1 8.3 71 45-142 298-369 (374)
18 3qor_A Nuclear migration prote 98.1 6.5E-05 2.2E-09 51.4 11.1 83 39-144 11-97 (121)
19 1x5m_A Calcyclin-binding prote 98.0 0.0001 3.5E-09 50.8 11.3 81 44-144 20-104 (127)
20 1wh0_A Ubiquitin carboxyl-term 98.0 6.5E-05 2.2E-09 52.4 9.1 91 42-143 17-111 (134)
21 1wfi_A Nuclear distribution ge 97.9 7.6E-05 2.6E-09 51.7 9.1 81 41-144 4-88 (131)
22 1wgv_A KIAA1068 protein; CS do 97.9 0.00014 4.9E-09 49.8 10.3 86 39-144 14-102 (124)
23 2o30_A Nuclear movement protei 97.9 0.00019 6.4E-09 49.7 10.3 75 44-142 4-79 (131)
24 2rh0_A NUDC domain-containing 97.8 0.00034 1.1E-08 50.0 11.5 78 43-144 12-91 (157)
25 1ejf_A Progesterone receptor P 97.7 0.0002 6.7E-09 49.2 8.5 78 45-143 4-81 (125)
26 2kmw_A Uncharacterized protein 97.3 0.00066 2.2E-08 48.2 7.0 78 44-144 4-82 (150)
27 2cg9_X CO-chaperone protein SB 97.2 0.00021 7.3E-09 49.7 3.2 84 44-143 6-97 (134)
28 3q9p_A Heat shock protein beta 88.9 1.2 3.9E-05 27.9 5.6 34 109-143 7-40 (85)
29 2y1y_A Alpha-crystallin B chai 84.7 2.2 7.5E-05 26.8 5.2 33 109-142 6-38 (90)
30 3gla_A Low molecular weight he 84.2 2.4 8.1E-05 27.0 5.3 34 109-143 14-47 (100)
31 3l1e_A Alpha-crystallin A chai 83.5 2.3 7.9E-05 27.6 5.1 33 109-142 12-44 (106)
32 2wj5_A Heat shock protein beta 82.6 3 0.0001 26.8 5.3 34 109-143 11-44 (101)
33 4fei_A Heat shock protein-rela 80.9 3.5 0.00012 26.4 5.2 33 109-142 16-48 (102)
34 3aab_A Putative uncharacterize 80.3 4.6 0.00016 26.7 5.8 34 109-143 34-68 (123)
35 4eld_A MJ16.5-P1, small heat s 79.3 4.4 0.00015 28.2 5.7 34 109-143 66-99 (161)
36 2klr_A Alpha-crystallin B chai 71.8 6.8 0.00023 27.9 5.0 33 109-142 73-105 (175)
37 1gme_A Heat shock protein 16.9 69.5 11 0.00038 25.9 5.6 34 110-144 54-88 (151)
38 2cql_A OK/SW-CL.103, 60S ribos 68.2 13 0.00046 23.9 5.4 17 67-84 20-36 (100)
39 1rl6_A Protein (ribosomal prot 64.4 22 0.00075 25.4 6.4 45 67-141 11-55 (177)
40 3j21_F 50S ribosomal protein L 63.7 22 0.00074 25.6 6.3 45 67-140 14-58 (184)
41 1nkw_E 50S ribosomal protein L 61.1 27 0.00093 25.7 6.5 45 67-141 39-83 (212)
42 1vq8_E 50S ribosomal protein L 59.1 29 0.00098 24.8 6.2 46 67-141 9-54 (178)
43 2nwt_A UPF0165 protein AF_2212 58.9 6.9 0.00024 23.7 2.4 30 124-155 3-32 (69)
44 3v2d_H 50S ribosomal protein L 56.5 36 0.0012 24.3 6.4 44 67-140 12-55 (180)
45 1ew4_A CYAY protein; friedreic 50.9 9 0.00031 25.0 2.2 18 125-142 29-46 (106)
46 3u5e_H L8, RP24, YL11, 60S rib 47.2 67 0.0023 23.1 6.6 46 67-141 13-59 (191)
47 3oeq_A Frataxin homolog, mitoc 47.1 15 0.00051 24.7 2.9 17 126-142 49-65 (123)
48 3iz5_F 60S ribosomal protein L 46.7 63 0.0021 23.2 6.4 45 67-140 13-59 (190)
49 2o30_A Nuclear movement protei 43.8 35 0.0012 22.6 4.4 32 109-140 14-45 (131)
50 2zkr_e 60S ribosomal protein L 37.7 62 0.0021 23.3 5.2 18 66-84 12-29 (192)
51 3t3l_A Frataxin, mitochondrial 36.9 23 0.00077 24.0 2.5 17 124-140 40-56 (129)
52 3bbo_I Ribosomal protein L6; l 36.8 29 0.001 25.7 3.3 45 67-141 54-99 (223)
53 3r8s_G 50S ribosomal protein L 35.9 37 0.0013 24.1 3.6 43 67-139 11-53 (176)
54 1wgv_A KIAA1068 protein; CS do 33.4 58 0.002 21.3 4.1 32 109-140 29-61 (124)
55 4a17_E RPL9, 60S ribosomal pro 31.6 60 0.0021 23.3 4.2 18 67-85 13-30 (188)
56 2rh0_A NUDC domain-containing 31.3 61 0.0021 22.3 4.1 32 109-140 23-54 (157)
57 3d33_A Domain of unknown funct 30.9 76 0.0026 20.6 4.3 26 112-142 22-47 (108)
58 1nvp_C Transcription initiatio 28.3 27 0.00094 21.4 1.6 15 123-137 46-60 (76)
59 3qor_A Nuclear migration prote 27.9 84 0.0029 20.4 4.2 33 109-141 26-60 (121)
60 1wfi_A Nuclear distribution ge 27.0 92 0.0031 20.4 4.3 32 109-140 17-50 (131)
61 3qqz_A Putative uncharacterize 26.5 2E+02 0.0067 21.3 7.9 65 61-138 21-86 (255)
62 1n91_A ORF, hypothetical prote 26.3 1.1E+02 0.0039 19.8 4.5 34 49-84 8-42 (108)
63 4atf_A Beta-agarase B; hydrola 25.8 1.4E+02 0.0047 23.1 5.6 49 66-119 72-121 (308)
64 1s21_A ORF2; predominantly bet 24.5 37 0.0013 24.8 1.9 27 123-155 174-204 (206)
65 1o4z_A Beta-agarase B; glycosi 24.3 1.6E+02 0.0056 22.9 5.9 49 66-120 103-153 (346)
66 1nh2_C Transcription initiatio 22.9 40 0.0014 20.8 1.6 15 123-137 48-62 (79)
67 2uwa_A Cellulase; glycoside hy 21.4 2.5E+02 0.0084 21.0 6.2 43 66-120 31-74 (274)
No 1
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.97 E-value=1.8e-30 Score=189.20 Aligned_cols=105 Identities=29% Similarity=0.391 Sum_probs=92.9
Q ss_pred cceeeEEECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeee-eeCCeEEEEEECCCCcc
Q 031602 44 SIPVDILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLER-RVPQKLLRKFKLPEDAN 122 (156)
Q Consensus 44 ~p~~~i~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~-~~~~~f~r~~~LP~~v~ 122 (156)
.+++||+|++++|+|.++|||++++||+|++++ +.|+|+ |+++.. ...++..|++.|| .+ |.|+|+|.||.+||
T Consensus 56 ~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~--g~~~~~-~~~~~~~~~~~Er~~~-g~f~R~~~LP~~vd 130 (161)
T 4eld_A 56 FMPISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIR--AKRSPL-MITESERIIYSEIPEE-EEIYRTIKLPATVK 130 (161)
T ss_dssp CCCEEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEE--EECCCC-CCCSSCEEEEECSCCC-CEEEEEEECSSCBC
T ss_pred ccceeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEE--EEEccc-ccCCCceEEEEEeecc-ccEEEEEECCCCcc
Confidence 455999999999999999999999999999999 799999 666554 2334567999999 87 99999999999999
Q ss_pred cCceEEEEeCcEEEEEEecCCCCCCCeEEEEe
Q 031602 123 VSAISAKCENGVLTIVVEKLPPPPKPKTVEVA 154 (156)
Q Consensus 123 ~~~i~A~~~~GvL~I~~pK~~~~~~~~~I~I~ 154 (156)
.++|+|+|+||||+|++||. +.+++|+|+|+
T Consensus 131 ~~~i~A~~~nGvL~I~lpK~-~~~~~r~I~Ie 161 (161)
T 4eld_A 131 EENASAKFENGVLSVILPKA-ESSIKKGINIE 161 (161)
T ss_dssp GGGCEEEEETTEEEEEEEBC-GGGSCCCCCCC
T ss_pred cccEEEEEECCEEEEEEEcC-CCCCCcEeecC
Confidence 99999999999999999998 45678999885
No 2
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.96 E-value=3.7e-30 Score=185.78 Aligned_cols=110 Identities=36% Similarity=0.610 Sum_probs=94.4
Q ss_pred CcccceeeEEECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCC
Q 031602 41 GVSSIPVDILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPED 120 (156)
Q Consensus 41 ~~~~p~~~i~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~ 120 (156)
..+.|++||+|++++|+|.++|||++++||+|.+.+++.|+|+ |+++.+ .+.++..|+++||.+ |.|+|+|.||.+
T Consensus 40 ~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~--g~~~~~-~~~~~~~~~~~Er~~-g~F~R~~~LP~~ 115 (151)
T 1gme_A 40 AFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVS--GERTKE-KEDKNDKWHRVERSS-GKFVRRFRLLED 115 (151)
T ss_dssp HHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEE--ECCCCC-CCCTTCEEEECCCCC-CCEEEEEECSSC
T ss_pred cccCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEE--EEEccc-cccCCceEEEEeEec-cEEEEEEECCCC
Confidence 4468999999999999999999999999999999643799999 555544 244567899999998 999999999999
Q ss_pred cccCceEEEEeCcEEEEEEecCCCC-CCCeEEEEe
Q 031602 121 ANVSAISAKCENGVLTIVVEKLPPP-PKPKTVEVA 154 (156)
Q Consensus 121 v~~~~i~A~~~~GvL~I~~pK~~~~-~~~~~I~I~ 154 (156)
|+.++|+|+|+||+|+|++||..+. .+.++|+|+
T Consensus 116 vd~~~i~A~~~nGvL~I~lPK~~~~~~~~~~I~I~ 150 (151)
T 1gme_A 116 AKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQIS 150 (151)
T ss_dssp CCGGGCEEEEETTEEEEEEECCCCCTTCCCCCCCC
T ss_pred ccccceEEEEECCEEEEEEEccCcCCCCCeEeeeC
Confidence 9999999999999999999998543 345777764
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.96 E-value=2.5e-28 Score=164.67 Aligned_cols=96 Identities=36% Similarity=0.599 Sum_probs=87.7
Q ss_pred ccceeeEEECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcc
Q 031602 43 SSIPVDILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDAN 122 (156)
Q Consensus 43 ~~p~~~i~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~ 122 (156)
+.|++||+|+++.|+|.++|||+++++|+|.+.+ +.|+|+ |+++.+ ...++..|+++|+.+ |.|+|+|.||.+|+
T Consensus 3 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~--g~~~~~-~~~~~~~~~~~er~~-g~f~r~~~LP~~vd 77 (100)
T 3gla_A 3 WVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIR--GERKSE-SSTETERFSRIERRY-GSFHRRFALPDSAD 77 (100)
T ss_dssp SCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEE--EEECCG-GGSSGGGEEEECCCC-EEEEEEEECCTTBC
T ss_pred ccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEE--EEEcCc-CccCCccEEEEeecc-eEEEEEEECCCCcC
Confidence 6899999999999999999999999999999999 799999 667655 344567899999997 99999999999999
Q ss_pred cCceEEEEeCcEEEEEEecCC
Q 031602 123 VSAISAKCENGVLTIVVEKLP 143 (156)
Q Consensus 123 ~~~i~A~~~~GvL~I~~pK~~ 143 (156)
.++|+|+|+||+|+|++||.+
T Consensus 78 ~~~i~A~~~~GvL~I~~pK~~ 98 (100)
T 3gla_A 78 ADGITAAGRNGVLEIRIPKRP 98 (100)
T ss_dssp TTSCEEEEETTEEEEEEEBC-
T ss_pred hHHeEEEEeCCEEEEEEecCC
Confidence 999999999999999999984
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.95 E-value=4.2e-27 Score=159.35 Aligned_cols=95 Identities=26% Similarity=0.407 Sum_probs=85.6
Q ss_pred CcccceeeEEECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCC
Q 031602 41 GVSSIPVDILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPED 120 (156)
Q Consensus 41 ~~~~p~~~i~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~ 120 (156)
+.+.|++||+|+++.|+|.++|||++++||+|++++ +.|+|+ |+++. ...|+++||.+ |.|+|+|.||.+
T Consensus 3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~--g~~~~------~~~~~~~er~~-g~f~R~~~LP~~ 72 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVS--GERPG------TEHLLRSERPS-GRFVRELAFPEP 72 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEE--EEECC------CSSCSSCCSEE-EEEEEEEECSSC
T ss_pred CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEE--EEEec------CCCEEEEEEec-cEEEEEEECCCC
Confidence 347899999999999999999999999999999999 799999 66642 24677889998 999999999999
Q ss_pred cccCceEEEEeCcEEEEEEecCCCC
Q 031602 121 ANVSAISAKCENGVLTIVVEKLPPP 145 (156)
Q Consensus 121 v~~~~i~A~~~~GvL~I~~pK~~~~ 145 (156)
|+.++|+|+|+||+|+|++||..+.
T Consensus 73 vd~~~i~A~~~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 73 VRPASGVASLAGGVLTVRFEKLRPT 97 (102)
T ss_dssp BCTTCCEEEEETTEEEEEEEBSSCC
T ss_pred cchhHcEEEEECCEEEEEEEccCcc
Confidence 9999999999999999999998543
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.94 E-value=1.8e-27 Score=166.26 Aligned_cols=93 Identities=27% Similarity=0.321 Sum_probs=83.6
Q ss_pred ccceeeEEECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcc
Q 031602 43 SSIPVDILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDAN 122 (156)
Q Consensus 43 ~~p~~~i~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~ 122 (156)
+.|++||++++++|+|.++|||++++||+|++.+++.|+|+ |+++.+ . +..|+++||.+ .|.|+|.||.+|+
T Consensus 23 ~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~--g~~~~~--~--~~~~~~~Er~~--~f~R~~~LP~~vd 94 (123)
T 3aab_A 23 VYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIE--AEREIT--E--PGVKYLTQRPK--YVRKVIRLPYNVA 94 (123)
T ss_dssp HCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEE--EECCCC--C--CSCEEEECSCS--EEEEEEECSSEEC
T ss_pred CCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEE--EEEecc--C--CCeEEEEEEeE--EEEEEEECCCCcC
Confidence 56999999999999999999999999999999984599999 565543 1 56788999984 8999999999999
Q ss_pred cCce-EEEEeCcEEEEEEecCC
Q 031602 123 VSAI-SAKCENGVLTIVVEKLP 143 (156)
Q Consensus 123 ~~~i-~A~~~~GvL~I~~pK~~ 143 (156)
.++| +|+|+||+|+|++||..
T Consensus 95 ~~~i~~A~~~~GvL~I~lPK~~ 116 (123)
T 3aab_A 95 KDAEISGKYENGVLTIRIPIAG 116 (123)
T ss_dssp TTCCCEEEEETTEEEEEEEGGG
T ss_pred cchhCeeEEcCCEEEEEEEcCC
Confidence 9999 99999999999999984
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.93 E-value=3.4e-25 Score=150.95 Aligned_cols=98 Identities=22% Similarity=0.452 Sum_probs=83.1
Q ss_pred ceeeEEECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccC
Q 031602 45 IPVDILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVS 124 (156)
Q Consensus 45 p~~~i~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~ 124 (156)
...+|+|+++.|.|.++|||++++||+|++.+ +.|+|+ |++... . ....|++ +.|.|+|.||.+||.+
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~--g~~~~~--~-~~~~~~~------~eF~R~~~LP~~vd~~ 70 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIH--GKHNER--Q-DDHGYIS------REFHRRYRLPSNVDQS 70 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEE--EEEEEE--E-TTTEEEE------EEEEEEEECCTTBCTT
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEE--EEEccc--c-CCCCEEE------EEEEEEEECCCCcChh
Confidence 45899999999999999999999999999999 799999 555432 1 1233442 4599999999999999
Q ss_pred ceEEEE-eCcEEEEEEecCCCC----CCCeEEEEe
Q 031602 125 AISAKC-ENGVLTIVVEKLPPP----PKPKTVEVA 154 (156)
Q Consensus 125 ~i~A~~-~~GvL~I~~pK~~~~----~~~~~I~I~ 154 (156)
+|+|+| +||+|+|++||..+. .++|.|+|+
T Consensus 71 ~i~A~~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 71 ALSCSLSADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp SCEEEECTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred HcEEEECCCCEEEEEEEccCcccccCCCCeEeeec
Confidence 999999 899999999999654 378999986
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.92 E-value=1.1e-24 Score=147.17 Aligned_cols=97 Identities=16% Similarity=0.302 Sum_probs=79.4
Q ss_pred eeeEEECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccCc
Q 031602 46 PVDILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVSA 125 (156)
Q Consensus 46 ~~~i~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~~ 125 (156)
.+||+++++.|.|.++|||++++||+|++.+ +.|+|+ |+++.. . ++..|++ ..|+|+|.||.+||.++
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~--g~~~~~--~-~~~~~~~------~eF~R~~~LP~~vd~~~ 70 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVH--ARHEER--P-DEHGFIA------REFHRRYRLPPGVDPAA 70 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEE--EEEEEC--S-STTCCEE------EEEEEEEECCTTBCTTC
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEE--EEEecc--c-CCCCEEE------EEEEEEEECCCCcChhH
Confidence 5789999999999999999999999999999 799999 566543 1 2334543 34999999999999999
Q ss_pred eEEEE-eCcEEEEEEecCCCCCCCeEEEEec
Q 031602 126 ISAKC-ENGVLTIVVEKLPPPPKPKTVEVAI 155 (156)
Q Consensus 126 i~A~~-~~GvL~I~~pK~~~~~~~~~I~I~~ 155 (156)
|+|+| +||+|+|++||. +..+++.++|.+
T Consensus 71 i~A~~s~nGvL~I~lPK~-~~~~~~~~~i~~ 100 (101)
T 2wj5_A 71 VTSALSPEGVLSIQATPA-SAQASLPSPPAA 100 (101)
T ss_dssp CEEEECTTSEEEEEECBC-CCCCSSCC----
T ss_pred CEEEECCCCEEEEEEECC-CcCCCCCCcccc
Confidence 99999 899999999998 456677777653
No 8
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.91 E-value=2.6e-24 Score=158.48 Aligned_cols=99 Identities=17% Similarity=0.299 Sum_probs=70.7
Q ss_pred ceeeEEECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccC
Q 031602 45 IPVDILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVS 124 (156)
Q Consensus 45 p~~~i~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~ 124 (156)
..+||+++++.|.|.++|||++++||+|++.+ +.|+|+ |+++.. .++..|++ +.|+|+|.||.+||.+
T Consensus 64 ~~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~--g~~~~~---~~~~~~~~------reF~R~~~LP~~Vd~~ 131 (175)
T 2klr_A 64 GLSEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVH--GKHEER---QDEHGFIS------REFHRKYRIPADVDPL 131 (175)
T ss_dssp -----CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEE--EEEEEE---EETTEEEE------EEEEEEEECTTTCCTT
T ss_pred CceEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEE--EEEccc---ccCCceEE------EEEEEEEECCCCcChh
Confidence 34799999999999999999999999999999 799999 555433 12334543 4599999999999999
Q ss_pred ceEEEE-eCcEEEEEEecCCCCCCCeEEEEec
Q 031602 125 AISAKC-ENGVLTIVVEKLPPPPKPKTVEVAI 155 (156)
Q Consensus 125 ~i~A~~-~~GvL~I~~pK~~~~~~~~~I~I~~ 155 (156)
+|+|+| +||||+|++||.++....|+|+|+.
T Consensus 132 ~i~A~~s~dGvL~I~lPK~~~~~~~r~I~I~~ 163 (175)
T 2klr_A 132 TITSSLSSDGVLTVNGPRKQVSGPERTIPITR 163 (175)
T ss_dssp TCEEEECTTSCEEEEEECC-------------
T ss_pred HeEEEEcCCCEEEEEEECCCCCCCCeEEEEec
Confidence 999999 7999999999985444569999874
No 9
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.90 E-value=2.2e-23 Score=165.81 Aligned_cols=98 Identities=17% Similarity=0.272 Sum_probs=82.1
Q ss_pred cccceeeEEECCC----eEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEEC
Q 031602 42 VSSIPVDILDSPK----DYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKL 117 (156)
Q Consensus 42 ~~~p~~~i~e~~~----~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~L 117 (156)
.+.|++|++|+++ +|.|.++|||+++++|+|.+++ +.|+|+ |+++.+ .+ + ++.+ |.|+|+|.|
T Consensus 96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~--ge~~~~--~e-~------~r~~-g~F~R~~~L 162 (314)
T 2bol_A 96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVR--AQKSVA--CG-D------AAMS-ESVGRSIPL 162 (314)
T ss_dssp TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEE--ECCBSS--TT-C------CCBC-CCEEEEEEC
T ss_pred cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEE--EEEecc--CC-C------CEEE-EEEEEEEEC
Confidence 3689999999999 9999999999999999999999 799999 555432 11 1 1554 999999999
Q ss_pred CCCcccCceEEEEe-CcEEEEEEecCCCCCCCeEEEEe
Q 031602 118 PEDANVSAISAKCE-NGVLTIVVEKLPPPPKPKTVEVA 154 (156)
Q Consensus 118 P~~v~~~~i~A~~~-~GvL~I~~pK~~~~~~~~~I~I~ 154 (156)
|.+|+.++|+|+|+ ||||+|++||..+. .+.|+|+
T Consensus 163 P~~Vd~e~i~A~~~~nGVL~I~lPK~~~~--~~~I~it 198 (314)
T 2bol_A 163 PPSVDRNHIQATITTDDVLVIEAPVNEPN--YKAIKLS 198 (314)
T ss_dssp CTTBCGGGCEEEECSSSEEEEEEEBSSCC--TTTEEEE
T ss_pred CCCccccccEEEEeCCCEEEEEEeccCcc--cceeecc
Confidence 99999999999999 99999999998543 3345543
No 10
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.89 E-value=4.8e-23 Score=135.01 Aligned_cols=82 Identities=20% Similarity=0.288 Sum_probs=68.1
Q ss_pred EEECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccCceEE
Q 031602 49 ILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVSAISA 128 (156)
Q Consensus 49 i~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~~i~A 128 (156)
+.|++++|.|.++|||++++||+|.+.+ +.|+|+ |+++... . + ..| .+ ++|.|+|.||.+||.++|+|
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~--g~~~~~~-~-~-~~~-----~~-~~F~R~~~LP~~vd~~~i~A 69 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEIT--GKHAARQ-D-E-HGY-----IS-RCFTRKYTLPPGVDPTQVSS 69 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEE--EEEC----------C-----CC-EEEEEEEECCTTCCGGGCEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEE--EEEcccc-C-C-CCE-----EE-EEEEEEEECCCCcChHHcEE
Confidence 4689999999999999999999999999 799999 6665431 1 1 112 23 88999999999999999999
Q ss_pred EEe-CcEEEEEEecC
Q 031602 129 KCE-NGVLTIVVEKL 142 (156)
Q Consensus 129 ~~~-~GvL~I~~pK~ 142 (156)
+|+ ||+|+|++||.
T Consensus 70 ~~~~~GvL~I~lPK~ 84 (85)
T 3q9p_A 70 SLSPEGTLTVEAPMP 84 (85)
T ss_dssp EECTTSEEEEEEECC
T ss_pred EECCCCEEEEEEEcC
Confidence 998 99999999996
No 11
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.87 E-value=5.1e-22 Score=131.38 Aligned_cols=82 Identities=20% Similarity=0.361 Sum_probs=66.7
Q ss_pred EECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccCceEEE
Q 031602 50 LDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVSAISAK 129 (156)
Q Consensus 50 ~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~~i~A~ 129 (156)
.++++.|+|.++|||++++||+|.+.+ +.|+|+ |+++.. .++..|++ +.|+|+|.||.+|+.++|+|+
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~--g~~~~~---~~~~~~~~------~ef~R~~~LP~~vd~~~i~A~ 69 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVH--GKHEER---QDEHGFIS------REFHRKYRIPADVDPLTITSS 69 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEET-TEEEEE--EEEEEE---ECSSSEEE------EEEEEEEECCTTBCGGGCEEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEE--EEEecc---cCCCCEEE------EEEEEEEECCCCcChhHcEEE
Confidence 367899999999999999999999999 799999 555433 12334543 459999999999999999999
Q ss_pred E-eCcEEEEEEecCC
Q 031602 130 C-ENGVLTIVVEKLP 143 (156)
Q Consensus 130 ~-~~GvL~I~~pK~~ 143 (156)
| +||+|+|++||..
T Consensus 70 ~~~~GvL~I~~pK~~ 84 (90)
T 2y1y_A 70 MSSDGVLTVNGPRKQ 84 (90)
T ss_dssp ECTTSEEEEEECBC-
T ss_pred ECCCCEEEEEEEcCC
Confidence 9 8999999999984
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.83 E-value=8.6e-21 Score=150.90 Aligned_cols=89 Identities=16% Similarity=0.263 Sum_probs=69.7
Q ss_pred ceeeEEECC---CeEEEEEEc-CCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCC
Q 031602 45 IPVDILDSP---KDYIFFMDV-PGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPED 120 (156)
Q Consensus 45 p~~~i~e~~---~~~~l~~~l-pG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~ 120 (156)
..++|.+++ +.|.|.++| ||++++||+|++++ +.|+|+ |+++.+.+ .|+++|+.| |+|+|+|.||++
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~--ge~~~~~~-----~~~~~Er~~-g~F~R~~~LP~~ 291 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVH--GVTGKEEK-----TENASHSEH-REFYKAFVTPEV 291 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEE--EEEC-----------------C-EEEEEEEECSSE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEE--EEEeccCC-----ceEEEEEee-eEEEEEEECCCC
Confidence 446666644 689999999 99999999999999 799999 77765421 468889998 999999999999
Q ss_pred cccCceEEEEeCcEEEEEEecC
Q 031602 121 ANVSAISAKCENGVLTIVVEKL 142 (156)
Q Consensus 121 v~~~~i~A~~~~GvL~I~~pK~ 142 (156)
||.++|+|+|+||||+|++||.
T Consensus 292 vd~~~i~A~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 292 VDASKTQAEIVDGLMVVEAPLF 313 (314)
T ss_dssp ECGGGCEEEEETTEEEEEEEEE
T ss_pred cChHHeEEEEeCCEEEEEEecC
Confidence 9999999999999999999986
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.12 E-value=2.4e-10 Score=74.88 Aligned_cols=81 Identities=10% Similarity=0.111 Sum_probs=70.7
Q ss_pred cceeeEEECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCccc
Q 031602 44 SIPVDILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANV 123 (156)
Q Consensus 44 ~p~~~i~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~ 123 (156)
.+.++++++.+.+.|.+.+||+.++++.|.+.. +.|.|++.+ . . ...|...+.|+..|++
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~--~-~----------------~~~y~~~~~L~~~I~~ 61 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEV--P-G----------------EDAYYLQPRLFGKIIP 61 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECC--T-T----------------SCCEEECCBBSSCBCG
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEc--C-C----------------CcEEEEeeEcCCccCc
Confidence 578999999999999999999999999999999 799998432 1 1 1457788899999999
Q ss_pred CceEEEEeCcEEEEEEecCCC
Q 031602 124 SAISAKCENGVLTIVVEKLPP 144 (156)
Q Consensus 124 ~~i~A~~~~GvL~I~~pK~~~ 144 (156)
+..++++.+|.|.|+|+|.++
T Consensus 62 ~~s~~~~~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 62 DKCKYEVLSTKIEICLAKADI 82 (92)
T ss_dssp GGCEEEECSSCEEEEEEBSSS
T ss_pred hhEEEEEECCEEEEEEEcCCC
Confidence 999999999999999999853
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.11 E-value=2.8e-10 Score=77.58 Aligned_cols=82 Identities=15% Similarity=0.136 Sum_probs=71.3
Q ss_pred ccceeeEEECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcc
Q 031602 43 SSIPVDILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDAN 122 (156)
Q Consensus 43 ~~p~~~i~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~ 122 (156)
..|.++++++.+.+.|.+.+||+++++++|.+.+ +.|.|++. .. + ...|...+.|+..|+
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~--~~-------~----------~~~y~~~~~L~~~I~ 67 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVK--LP-------S----------GEDYNLKLELLHPII 67 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEE--CT-------T----------SSEEEEEECBSSCCC
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEE--eC-------C----------CcEEEEEeeCCCcCC
Confidence 3678999999999999999999999999999999 78999732 11 0 145888899999999
Q ss_pred cCceEEEEeCcEEEEEEecCCC
Q 031602 123 VSAISAKCENGVLTIVVEKLPP 144 (156)
Q Consensus 123 ~~~i~A~~~~GvL~I~~pK~~~ 144 (156)
++..++++.+|.|.|+|+|.++
T Consensus 68 ~e~s~~~~~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 68 PEQSTFKVLSTKIEIKLKKPEA 89 (114)
T ss_dssp GGGEEEEECSSSEEEEEECSSC
T ss_pred ccccEEEEECCEEEEEEEcCCC
Confidence 9999999999999999999854
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.57 E-value=2.6e-07 Score=64.43 Aligned_cols=78 Identities=8% Similarity=0.207 Sum_probs=68.2
Q ss_pred ccceeeEEECCCeEEEEEEcCCCC--CCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCC
Q 031602 43 SSIPVDILDSPKDYIFFMDVPGRP--KSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPED 120 (156)
Q Consensus 43 ~~p~~~i~e~~~~~~l~~~lpG~~--~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~ 120 (156)
..|.+.+..+++.++|.+.+|..+ ..++++.+++ ..+.+. ...|.-++.||..
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~------------------------~~PYyLRL~LP~~ 56 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFH------------------------LSPYYLRLRFPHE 56 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEEC------------------------SSSSCEEECCSSC
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEe------------------------cCCeEEEecCCCe
Confidence 478999999999999999999999 8999999999 788885 2446667999999
Q ss_pred c-ccCceEEEEe--CcEEEEEEecCCCC
Q 031602 121 A-NVSAISAKCE--NGVLTIVVEKLPPP 145 (156)
Q Consensus 121 v-~~~~i~A~~~--~GvL~I~~pK~~~~ 145 (156)
| +.+..+|+|+ .|.|+|++||..+.
T Consensus 57 V~e~~~~kA~YD~d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 57 LIDDERSTAQYDSKDECINVKVAKLNKN 84 (134)
T ss_dssp EECCSSCEEEEETTTTEEEEEEEESSTT
T ss_pred eecCCCcceeEeccCCEEEEEEeCCCCC
Confidence 9 8888999995 79999999998543
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.52 E-value=3e-06 Score=57.31 Aligned_cols=80 Identities=8% Similarity=0.204 Sum_probs=68.2
Q ss_pred CcccceeeEEECCCeEEEEEEcCCCC--CCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECC
Q 031602 41 GVSSIPVDILDSPKDYIFFMDVPGRP--KSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLP 118 (156)
Q Consensus 41 ~~~~p~~~i~e~~~~~~l~~~lpG~~--~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP 118 (156)
-+..|...+..+++.++|.+.+|... ..++++.+.+ +.+... ...|.-++.||
T Consensus 14 ~~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~------------------------~~PYyLRL~lP 68 (115)
T 3eud_A 14 KMITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFH------------------------LSPYYLRLRFP 68 (115)
T ss_dssp CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEE------------------------ETTEEEEEECS
T ss_pred CEeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEe------------------------cCCeEEEEecC
Confidence 35689999999999999999999877 7899999999 788876 24466789999
Q ss_pred CCc-ccCceEEEEe--CcEEEEEEecCCCC
Q 031602 119 EDA-NVSAISAKCE--NGVLTIVVEKLPPP 145 (156)
Q Consensus 119 ~~v-~~~~i~A~~~--~GvL~I~~pK~~~~ 145 (156)
..+ +.+.-+|+|+ +|.++|++||..+.
T Consensus 69 ~~vved~~~~A~YD~d~g~~~v~lpK~~~G 98 (115)
T 3eud_A 69 HELIDDERSTAQYDSKDECINVKVAKLNKN 98 (115)
T ss_dssp SCEECSTTCEEEEETTTTEEEEEEEESSTT
T ss_pred cceecCCCcceEEeCCCcEEEEEEcCCcCC
Confidence 998 6677899995 79999999998643
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.41 E-value=7.9e-07 Score=72.12 Aligned_cols=71 Identities=20% Similarity=0.220 Sum_probs=60.7
Q ss_pred ceeeEEECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccC
Q 031602 45 IPVDILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVS 124 (156)
Q Consensus 45 p~~~i~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~ 124 (156)
+++.+... .|.+++.|||+++++|++...+ +.|+|+ .|.|+|.+.||......
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~g-deL~v~------------------------~g~~rR~i~LP~~L~~~ 350 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYG-PEVTVE------------------------AGDQRRNIFLPPALSGR 350 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEET-TEEEEE------------------------ETTEEEEEECCTTTTTC
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEEC-CeEEEE------------------------ECCEeecccCCHHHcCC
Confidence 45555444 8999999999999999999999 799997 38899999999988666
Q ss_pred c-eEEEEeCcEEEEEEecC
Q 031602 125 A-ISAKCENGVLTIVVEKL 142 (156)
Q Consensus 125 ~-i~A~~~~GvL~I~~pK~ 142 (156)
. ..|.|+||.|+|++-.+
T Consensus 351 ~v~~A~~~~~~L~i~~~~~ 369 (374)
T 3igf_A 351 PITGAKFQNNYLIISFLEH 369 (374)
T ss_dssp CEEEEEEETTEEEEEECCC
T ss_pred CccccEEECCEEEEEEehh
Confidence 5 77889999999999765
No 18
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=98.09 E-value=6.5e-05 Score=51.44 Aligned_cols=83 Identities=17% Similarity=0.191 Sum_probs=67.6
Q ss_pred CCCcccceeeEEECCCeEEEEEEcC-C--CCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEE
Q 031602 39 SKGVSSIPVDILDSPKDYIFFMDVP-G--RPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKF 115 (156)
Q Consensus 39 ~~~~~~p~~~i~e~~~~~~l~~~lp-G--~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~ 115 (156)
..+...|.+.+..+.+.+.|.+.|| | ++..+|.|.+.. +.|.|...+. . .-| ..
T Consensus 11 ~nG~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~---~-----------------~~~--~g 67 (121)
T 3qor_A 11 GNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKGQ---P-----------------AII--DG 67 (121)
T ss_dssp TSSCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEETTS---C-----------------CSE--EE
T ss_pred CCCCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEcCc---c-----------------eEE--ec
Confidence 4455688999999999999999999 4 789999999999 7999864321 0 112 45
Q ss_pred ECCCCcccCceEEEEeCc-EEEEEEecCCC
Q 031602 116 KLPEDANVSAISAKCENG-VLTIVVEKLPP 144 (156)
Q Consensus 116 ~LP~~v~~~~i~A~~~~G-vL~I~~pK~~~ 144 (156)
.|...|+++.-...+++| .|.|+|-|...
T Consensus 68 ~L~~~I~~deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 68 ELYNEVKVEESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp EBSSCBCGGGCEEEEETTTEEEEEEEBSSS
T ss_pred cccccccccccEEEEcCCCEEEEEEEECCC
Confidence 788999999988999998 99999999853
No 19
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.03 E-value=0.0001 Score=50.79 Aligned_cols=81 Identities=16% Similarity=0.167 Sum_probs=67.5
Q ss_pred cceeeEEECCCeEEEEEEcCCC---CCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEE-CCC
Q 031602 44 SIPVDILDSPKDYIFFMDVPGR---PKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFK-LPE 119 (156)
Q Consensus 44 ~p~~~i~e~~~~~~l~~~lpG~---~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~-LP~ 119 (156)
.+.++++.+.+.+.|.+.+||+ .++++.|.+.. +.|.|.+.+. . ...|.-.+. |-.
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~--------~-----------~~~y~~~~~~L~~ 79 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNL--------N-----------GKSYSMIVNNLLK 79 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSC--------S-----------SSCEEEEEECBSS
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcC--------C-----------CCcEEEEhHHhcC
Confidence 4679999999999999999999 89999999999 7999974311 0 124666775 999
Q ss_pred CcccCceEEEEeCcEEEEEEecCCC
Q 031602 120 DANVSAISAKCENGVLTIVVEKLPP 144 (156)
Q Consensus 120 ~v~~~~i~A~~~~GvL~I~~pK~~~ 144 (156)
.|+++.-+..+.++.+.|+|-|..+
T Consensus 80 ~I~~e~S~~~v~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 80 PISVEGSSKKVKTDTVLILCRKKVE 104 (127)
T ss_dssp CCCTTTCEEEEETTEEEEEEECSSS
T ss_pred ccCcccCEEEEeCCEEEEEEEECCC
Confidence 9999998888999999999999853
No 20
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.95 E-value=6.5e-05 Score=52.43 Aligned_cols=91 Identities=10% Similarity=0.064 Sum_probs=69.6
Q ss_pred cccceeeEEEC-CCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCC---eEEEEEEC
Q 031602 42 VSSIPVDILDS-PKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQ---KLLRKFKL 117 (156)
Q Consensus 42 ~~~p~~~i~e~-~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~---~f~r~~~L 117 (156)
...+.++++++ .+.+.|.+.++++.++++.|.+.. +.|.|++.+.....-..... +| .|.-.+.|
T Consensus 17 ~~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~~~~l~~~~a----------~g~~~~y~~~~~L 85 (134)
T 1wh0_A 17 LAFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRDGNFLRLHPG----------CGPHTTFRWQVKL 85 (134)
T ss_dssp ESCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCCHHHHHHSTT----------CCTTSCEEEEEEB
T ss_pred ccCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCCCcccccccc----------cCcceeEEEeccc
Confidence 34678999999 999999999999999999999999 79999743110000000000 01 57777889
Q ss_pred CCCcccCceEEEEeCcEEEEEEecCC
Q 031602 118 PEDANVSAISAKCENGVLTIVVEKLP 143 (156)
Q Consensus 118 P~~v~~~~i~A~~~~GvL~I~~pK~~ 143 (156)
-..|+++.-+..+.++.+.|+|.|.+
T Consensus 86 ~~~I~pe~S~~~v~~~kIeI~L~K~e 111 (134)
T 1wh0_A 86 RNLIEPEQCTFCFTASRIDICLRKRQ 111 (134)
T ss_dssp SSCEEEEEEEEEECSSEEEEEEEESS
T ss_pred cccCCchhCEEEEeCCEEEEEEEECC
Confidence 99999999888888999999999984
No 21
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.92 E-value=7.6e-05 Score=51.68 Aligned_cols=81 Identities=20% Similarity=0.212 Sum_probs=65.7
Q ss_pred CcccceeeEEECCCeEEEEEEcC-C--CCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEEC
Q 031602 41 GVSSIPVDILDSPKDYIFFMDVP-G--RPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKL 117 (156)
Q Consensus 41 ~~~~p~~~i~e~~~~~~l~~~lp-G--~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~L 117 (156)
|...|.+.++.+.+.+.|.+.|| | ++++++.|.+.. +.|.|.+.|.. + .+ ...|
T Consensus 4 g~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~~-----------~---------~~--~~~L 60 (131)
T 1wfi_A 4 GSSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLKGQP-----------P---------VV--DGEL 60 (131)
T ss_dssp SSSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEETTSC-----------C---------SB--CSCB
T ss_pred CCCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEECCce-----------E---------EE--eccc
Confidence 33578999999999999999999 6 889999999999 89999743210 0 01 2357
Q ss_pred CCCcccCceEEEEeCc-EEEEEEecCCC
Q 031602 118 PEDANVSAISAKCENG-VLTIVVEKLPP 144 (156)
Q Consensus 118 P~~v~~~~i~A~~~~G-vL~I~~pK~~~ 144 (156)
...|+++.-..++.+| .|.|+|-|..+
T Consensus 61 ~~~I~~e~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 61 YNEVKVEESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp SSCBCSTTCEEEEETTTEEEEEEEBSSS
T ss_pred ccccccccCEEEEcCCCEEEEEEEECCC
Confidence 8899999988899998 89999999853
No 22
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.92 E-value=0.00014 Score=49.84 Aligned_cols=86 Identities=15% Similarity=0.157 Sum_probs=68.2
Q ss_pred CCCcccceeeEEECCCeEEEEEEcC-CC-CCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEE
Q 031602 39 SKGVSSIPVDILDSPKDYIFFMDVP-GR-PKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFK 116 (156)
Q Consensus 39 ~~~~~~p~~~i~e~~~~~~l~~~lp-G~-~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~ 116 (156)
..+...|.+.++.+.+.+.|++.|| |+ +.+++.|.+.. +.|.|.+.+ . .+ ..+.-...
T Consensus 14 ~nG~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~---~-----~~-----------~~~~~~~~ 73 (124)
T 1wgv_A 14 YNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLE---E-----NG-----------ERVLMEGK 73 (124)
T ss_dssp SSSBCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEEC---S-----SS-----------EEEEEEEE
T ss_pred cCCCcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEc---c-----CC-----------CceEEccc
Confidence 3455678999999999999999999 88 89999999999 899997321 0 01 11223567
Q ss_pred CCCCcccCceEEEEeCcE-EEEEEecCCC
Q 031602 117 LPEDANVSAISAKCENGV-LTIVVEKLPP 144 (156)
Q Consensus 117 LP~~v~~~~i~A~~~~Gv-L~I~~pK~~~ 144 (156)
|...|+++.-...+.++. |.|+|-|...
T Consensus 74 L~~~I~~e~S~w~i~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 74 LTHKINTESSLWSLEPGKCVLVNLSKVGE 102 (124)
T ss_dssp BSSCBCTTTCEEEECTTSEEEEEECBSSS
T ss_pred ccCcCCCcCCEEEEeCCCEEEEEEEECCC
Confidence 999999999888898875 9999999843
No 23
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.87 E-value=0.00019 Score=49.74 Aligned_cols=75 Identities=13% Similarity=0.162 Sum_probs=61.4
Q ss_pred cceeeEEECCCeEEEEEEcC-CCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcc
Q 031602 44 SIPVDILDSPKDYIFFMDVP-GRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDAN 122 (156)
Q Consensus 44 ~p~~~i~e~~~~~~l~~~lp-G~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~ 122 (156)
.|.+.++.+.+.+.|.+.|| |++++++.|.+.. +.|.|.+.|. . .-...|...|+
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~g~----------------------~-~~~~~L~~~I~ 59 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQGE----------------------I-VIDGELLHEVD 59 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEETTE----------------------E-EEEEEBSSCEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEECCE----------------------e-eEccccccccc
Confidence 57899999999999999996 8999999999999 7999974321 0 11457889999
Q ss_pred cCceEEEEeCcEEEEEEecC
Q 031602 123 VSAISAKCENGVLTIVVEKL 142 (156)
Q Consensus 123 ~~~i~A~~~~GvL~I~~pK~ 142 (156)
++.-...+.++.|.|+|-|.
T Consensus 60 ~e~S~w~i~~~kv~i~L~K~ 79 (131)
T 2o30_A 60 VSSLWWVINGDVVDVNVTKK 79 (131)
T ss_dssp EEEEEEEEETTEEEEEEEES
T ss_pred cccCEEEEeCCEEEEEEEEC
Confidence 99988889999999999998
No 24
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.84 E-value=0.00034 Score=50.02 Aligned_cols=78 Identities=19% Similarity=0.226 Sum_probs=65.2
Q ss_pred ccceeeEEECCCeEEEEEEcC-CCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCc
Q 031602 43 SSIPVDILDSPKDYIFFMDVP-GRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDA 121 (156)
Q Consensus 43 ~~p~~~i~e~~~~~~l~~~lp-G~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v 121 (156)
..|.+.++.+.+.+.|++.|| |++..+|.|.+.. +.|.|.+.|+ . + -...|...|
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~kg~-----------~-----------~-l~g~L~~~I 67 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVGGR-----------E-----------I-LKGKLFDST 67 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEETTE-----------E-----------E-EEEEBSSCB
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEECCE-----------E-----------E-Eeecccccc
Confidence 468899999999999999998 8899999999999 8999974321 0 1 145788999
Q ss_pred ccCceEEEEeCcE-EEEEEecCCC
Q 031602 122 NVSAISAKCENGV-LTIVVEKLPP 144 (156)
Q Consensus 122 ~~~~i~A~~~~Gv-L~I~~pK~~~ 144 (156)
+++.-..++.++. |.|+|-|...
T Consensus 68 ~~eeS~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 68 IADEGTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp CGGGCEEEEECCCEEEEEEEBSSC
T ss_pred CccccEEEEcCCcEEEEEEEEcCC
Confidence 9999889999875 9999999853
No 25
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.73 E-value=0.0002 Score=49.22 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=64.3
Q ss_pred ceeeEEECCCeEEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccC
Q 031602 45 IPVDILDSPKDYIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVS 124 (156)
Q Consensus 45 p~~~i~e~~~~~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~ 124 (156)
|.++++.+.+.+.|++.+|+. +++.|.+.. +.|.+++.+ ... ...|.-.+.|-..|+++
T Consensus 4 ~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~--~~~----------------~~~y~~~l~L~~~I~~e 62 (125)
T 1ejf_A 4 ASAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLG--GSD----------------NFKHLNEIDLFHCIDPN 62 (125)
T ss_dssp CCEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEE--TTT----------------TEEEEEEEEBSSCEEEE
T ss_pred CceeEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEe--CCC----------------CceEEEEEEccceeccc
Confidence 379999999999999999996 699999999 799997431 111 12366678999999999
Q ss_pred ceEEEEeCcEEEEEEecCC
Q 031602 125 AISAKCENGVLTIVVEKLP 143 (156)
Q Consensus 125 ~i~A~~~~GvL~I~~pK~~ 143 (156)
..+.++.+..+.|+|.|..
T Consensus 63 ~S~~~v~~~kiei~L~K~~ 81 (125)
T 1ejf_A 63 DSKHKRTDRSILCCLRKGE 81 (125)
T ss_dssp EEEEEECSSCEEEEEEESS
T ss_pred cCEEEECCCEEEEEEEECC
Confidence 9888888899999999985
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.33 E-value=0.00066 Score=48.15 Aligned_cols=78 Identities=10% Similarity=0.077 Sum_probs=63.2
Q ss_pred cceeeEEECCCeEEEEEEcCCCCCCCeEEEEe-cCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcc
Q 031602 44 SIPVDILDSPKDYIFFMDVPGRPKSDIQVTVE-DERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDAN 122 (156)
Q Consensus 44 ~p~~~i~e~~~~~~l~~~lpG~~~edi~V~~~-~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~ 122 (156)
.|.++++.+.+.+.|++.|+++ +++.|.+. . +.|.+++. ... ...|.-.+.|-..|+
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~---~~~----------------~~~y~~~l~L~~~Id 61 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL---GAQ----------------GERFEFSLELYGKIM 61 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE---TTT----------------TEEEEEEEEBSSCEE
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE---cCC----------------CceEEEEeEhhhccc
Confidence 5889999999999999999997 47899998 6 78999832 111 124666788999999
Q ss_pred cCceEEEEeCcEEEEEEecCCC
Q 031602 123 VSAISAKCENGVLTIVVEKLPP 144 (156)
Q Consensus 123 ~~~i~A~~~~GvL~I~~pK~~~ 144 (156)
++ -+.+.....+.|+|.|..+
T Consensus 62 pe-S~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 62 TE-YRKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EE-EEEEEESSSEEEEEEECCS
T ss_pred cc-ceEEecCCEEEEEEEECCC
Confidence 99 7888888889999999853
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.21 E-value=0.00021 Score=49.72 Aligned_cols=84 Identities=11% Similarity=0.103 Sum_probs=58.4
Q ss_pred cceeeEEECCCe-------EEEEEEcCCCCCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEE
Q 031602 44 SIPVDILDSPKD-------YIFFMDVPGRPKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFK 116 (156)
Q Consensus 44 ~p~~~i~e~~~~-------~~l~~~lpG~~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~ 116 (156)
.|.+.++.+.+. +.|++.+|+++ ++.|.+.. +.|.+++. .... .++ .. ...|.-.+.
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~--~~~~----~g~------~~-~~~y~~~l~ 69 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQ--SKPH----VGD------EN-VHHYQLHID 69 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCE--EC------------------CEEBCEEEE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEe--cccc----cCC------cc-CceEEEEEE
Confidence 577888888776 99999999974 88889998 79999732 1110 000 00 023566789
Q ss_pred CCCCcccCceEEEEeCcE-EEEEEecCC
Q 031602 117 LPEDANVSAISAKCENGV-LTIVVEKLP 143 (156)
Q Consensus 117 LP~~v~~~~i~A~~~~Gv-L~I~~pK~~ 143 (156)
|...|+++..+..+.++. |.|+|.|..
T Consensus 70 L~~~Idpe~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 70 LYKEIIPEKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp CSSCCCSSSEEEEECCC--CEEEEEECS
T ss_pred ChhhccccccEEEECCCEEEEEEEEECC
Confidence 999999999999999988 999999985
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=88.91 E-value=1.2 Score=27.86 Aligned_cols=34 Identities=12% Similarity=0.222 Sum_probs=30.1
Q ss_pred CeEEEEEECCCCcccCceEEEEeCcEEEEEEecCC
Q 031602 109 QKLLRKFKLPEDANVSAISAKCENGVLTIVVEKLP 143 (156)
Q Consensus 109 ~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~pK~~ 143 (156)
..|.-.+.|| +++++.|+-.+++|.|+|..-+..
T Consensus 7 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 7 DRWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp CEEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 5688899999 899999999999999999998763
No 29
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=84.72 E-value=2.2 Score=26.76 Aligned_cols=33 Identities=6% Similarity=0.105 Sum_probs=29.6
Q ss_pred CeEEEEEECCCCcccCceEEEEeCcEEEEEEecC
Q 031602 109 QKLLRKFKLPEDANVSAISAKCENGVLTIVVEKL 142 (156)
Q Consensus 109 ~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~pK~ 142 (156)
..|.-.+.|| +++.+.|+-.+.+|.|+|..-+.
T Consensus 6 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 38 (90)
T 2y1y_A 6 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 38 (90)
T ss_dssp CCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEe
Confidence 5688889999 99999999999999999998765
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=84.22 E-value=2.4 Score=26.95 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=30.0
Q ss_pred CeEEEEEECCCCcccCceEEEEeCcEEEEEEecCC
Q 031602 109 QKLLRKFKLPEDANVSAISAKCENGVLTIVVEKLP 143 (156)
Q Consensus 109 ~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~pK~~ 143 (156)
..|.-.+.|| +++.+.|+-.+++|.|+|..-+..
T Consensus 14 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~ 47 (100)
T 3gla_A 14 NHFVLYADLP-GIDPSQIEVQMDKGILSIRGERKS 47 (100)
T ss_dssp SEEEEEEECT-TSCGGGCEEEEETTEEEEEEEECC
T ss_pred CEEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcC
Confidence 5677789999 899999999999999999987763
No 31
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=83.49 E-value=2.3 Score=27.62 Aligned_cols=33 Identities=9% Similarity=0.129 Sum_probs=29.5
Q ss_pred CeEEEEEECCCCcccCceEEEEeCcEEEEEEecC
Q 031602 109 QKLLRKFKLPEDANVSAISAKCENGVLTIVVEKL 142 (156)
Q Consensus 109 ~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~pK~ 142 (156)
..|.-.+.|| +++.+.|+-.+.+|.|+|..-+.
T Consensus 12 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 12 DKFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp SEEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 5688899999 89999999999999999998654
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=82.56 E-value=3 Score=26.81 Aligned_cols=34 Identities=9% Similarity=0.007 Sum_probs=30.1
Q ss_pred CeEEEEEECCCCcccCceEEEEeCcEEEEEEecCC
Q 031602 109 QKLLRKFKLPEDANVSAISAKCENGVLTIVVEKLP 143 (156)
Q Consensus 109 ~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~pK~~ 143 (156)
..|.-.+.|| +++.+.|+-.+.+|.|+|..-+..
T Consensus 11 ~~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 11 GYFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp SCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 4577789999 999999999999999999988763
No 33
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=80.93 E-value=3.5 Score=26.39 Aligned_cols=33 Identities=18% Similarity=0.289 Sum_probs=29.3
Q ss_pred CeEEEEEECCCCcccCceEEEEeCcEEEEEEecC
Q 031602 109 QKLLRKFKLPEDANVSAISAKCENGVLTIVVEKL 142 (156)
Q Consensus 109 ~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~pK~ 142 (156)
..|.-.+.|| +++.+.|+-+++++.|+|+.-+.
T Consensus 16 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~ 48 (102)
T 4fei_A 16 THLDLLLDVP-GVDAGTLALAEDGGQLTVSGERP 48 (102)
T ss_dssp TEEEEEEECT-TCCGGGCEEEEETTEEEEEEEEC
T ss_pred CEEEEEEECC-CCchHhEEEEEECCEEEEEEEEe
Confidence 5678889999 89999999999999999987764
No 34
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=80.34 E-value=4.6 Score=26.73 Aligned_cols=34 Identities=24% Similarity=0.159 Sum_probs=28.7
Q ss_pred CeEEEEEECCCCcccCceEEEEeC-cEEEEEEecCC
Q 031602 109 QKLLRKFKLPEDANVSAISAKCEN-GVLTIVVEKLP 143 (156)
Q Consensus 109 ~~f~r~~~LP~~v~~~~i~A~~~~-GvL~I~~pK~~ 143 (156)
..|.-.+.|| +++.+.|+..+.+ |.|+|+.-+..
T Consensus 34 ~~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~ 68 (123)
T 3aab_A 34 GYLVVVADLA-GFNKEKIKARVSGQNELIIEAEREI 68 (123)
T ss_dssp TEEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCC
T ss_pred CEEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEec
Confidence 3455567899 8999999999999 99999998764
No 35
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=79.34 E-value=4.4 Score=28.19 Aligned_cols=34 Identities=24% Similarity=0.239 Sum_probs=28.9
Q ss_pred CeEEEEEECCCCcccCceEEEEeCcEEEEEEecCC
Q 031602 109 QKLLRKFKLPEDANVSAISAKCENGVLTIVVEKLP 143 (156)
Q Consensus 109 ~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~pK~~ 143 (156)
..|.-.+.|| +++.+.|+..+++|.|+|+.-+..
T Consensus 66 ~~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 66 QHIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp SEEEEEEECT-TCCGGGEEEEEETTEEEEEEECCC
T ss_pred CEEEEEEECC-CCChHhEEEEEECCEEEEEEEEcc
Confidence 3455568898 899999999999999999998774
No 36
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=71.76 E-value=6.8 Score=27.89 Aligned_cols=33 Identities=6% Similarity=0.105 Sum_probs=29.1
Q ss_pred CeEEEEEECCCCcccCceEEEEeCcEEEEEEecC
Q 031602 109 QKLLRKFKLPEDANVSAISAKCENGVLTIVVEKL 142 (156)
Q Consensus 109 ~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~pK~ 142 (156)
..|.-.+.|| +++++.|+.++.+|.|+|+.-+.
T Consensus 73 d~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~ 105 (175)
T 2klr_A 73 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 105 (175)
T ss_dssp SEEEEEECCS-SCCGGGEEEEEETTEEEEEEEEE
T ss_pred CeEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 4577788999 99999999999999999998764
No 37
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=69.54 E-value=11 Score=25.92 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=27.4
Q ss_pred eEEEEEECCCCcccCceEEEEe-CcEEEEEEecCCC
Q 031602 110 KLLRKFKLPEDANVSAISAKCE-NGVLTIVVEKLPP 144 (156)
Q Consensus 110 ~f~r~~~LP~~v~~~~i~A~~~-~GvL~I~~pK~~~ 144 (156)
.|.-.+.|| +++.+.|+..+. ++.|+|+.-+...
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 355567899 899999999995 6799999987643
No 38
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=68.20 E-value=13 Score=23.90 Aligned_cols=17 Identities=18% Similarity=0.644 Sum_probs=14.5
Q ss_pred CCCeEEEEecCcEEEEEe
Q 031602 67 KSDIQVTVEDERTLVIRS 84 (156)
Q Consensus 67 ~edi~V~~~~~~~L~I~~ 84 (156)
|+.|+|++++ +.++|+|
T Consensus 20 P~gV~V~i~~-~~VtVKG 36 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKG 36 (100)
T ss_dssp CSSCEEEEET-TEEEEEE
T ss_pred CCCCEEEEeC-CEEEEEC
Confidence 5788999999 7999984
No 39
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=64.35 E-value=22 Score=25.37 Aligned_cols=45 Identities=24% Similarity=0.432 Sum_probs=31.5
Q ss_pred CCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccCceEEEEeCcEEEEEEec
Q 031602 67 KSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVSAISAKCENGVLTIVVEK 141 (156)
Q Consensus 67 ~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~pK 141 (156)
|+.|+|.+++ +.++|+|- .|..++.| |.. +....+||.|.|..+.
T Consensus 11 P~gV~V~i~~-~~VtVkGp----------------------kG~L~~~~--~~~-----v~i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGP----------------------KGELTRTF--HPD-----MTITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEET-TEEEEEET----------------------TEEEEEEC--CTT-----CEEEEETTEEEEECSC
T ss_pred CCCCEEEEeC-CEEEEECC----------------------CeEEEEEc--CCC-----EEEEEeCCEEEEEcCC
Confidence 5788999999 79999843 25565554 433 4556789998887553
No 40
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=63.73 E-value=22 Score=25.59 Aligned_cols=45 Identities=27% Similarity=0.402 Sum_probs=30.6
Q ss_pred CCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccCceEEEEeCcEEEEEEe
Q 031602 67 KSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVSAISAKCENGVLTIVVE 140 (156)
Q Consensus 67 ~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~p 140 (156)
|+.++|++++ +.++|+|- .|..++.|.-| . ++..++++.|+|..+
T Consensus 14 P~gV~v~i~~-~~V~VkGp----------------------kG~L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEG-YKVKVKGP----------------------KGELEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESS-SEEEEECS----------------------SCEEEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEcC----------------------CeEEEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 5789999998 89999842 26666555322 2 445578898888753
No 41
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=61.13 E-value=27 Score=25.70 Aligned_cols=45 Identities=11% Similarity=0.255 Sum_probs=30.9
Q ss_pred CCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccCceEEEEeCcEEEEEEec
Q 031602 67 KSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVSAISAKCENGVLTIVVEK 141 (156)
Q Consensus 67 ~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~pK 141 (156)
|+.|+|++++ +.++|+|- .|..++.| +.. +....+||.|.|+.+.
T Consensus 39 P~gV~V~i~~-~~VtVKGP----------------------kG~L~~~~--~~~-----v~i~~e~~~i~v~~~~ 83 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGP----------------------KGELTVPY--NTE-----LTVRQDGDQLLVERPS 83 (212)
T ss_pred CCCcEEEEeC-CEEEEECC----------------------CEEEEEEC--CCC-----eEEEEECCEEEEEcCC
Confidence 5788999999 79999842 25555544 433 4556788988887653
No 42
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=59.14 E-value=29 Score=24.81 Aligned_cols=46 Identities=11% Similarity=0.270 Sum_probs=31.1
Q ss_pred CCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccCceEEEEeCcEEEEEEec
Q 031602 67 KSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVSAISAKCENGVLTIVVEK 141 (156)
Q Consensus 67 ~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~pK 141 (156)
|+.++|++++ +.++|+|- .|..++.|. +.. ++...++|.|.|..+.
T Consensus 9 P~gV~v~i~~-~~vtVkGp----------------------kG~L~~~~~-~~~-----v~i~~~~~~i~v~~~~ 54 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGD----------------------NGSVTRRLW-YPD-----IDVSVDGDTVVIESDE 54 (178)
T ss_dssp CTTCEEEEET-TEEEEEET----------------------TEEEEEECC-CTT-----CEEEEETTEEEEECSC
T ss_pred CCCCEEEEeC-CEEEEECC----------------------CeEEEEEEE-CCe-----EEEEEECCEEEEEcCC
Confidence 4788999999 79999843 255555552 323 4456789988887553
No 43
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=58.94 E-value=6.9 Score=23.66 Aligned_cols=30 Identities=23% Similarity=0.271 Sum_probs=17.9
Q ss_pred CceEEEEeCcEEEEEEecCCCCCCCeEEEEec
Q 031602 124 SAISAKCENGVLTIVVEKLPPPPKPKTVEVAI 155 (156)
Q Consensus 124 ~~i~A~~~~GvL~I~~pK~~~~~~~~~I~I~~ 155 (156)
..|.|.|+||||.-.=|-. -....++.|.+
T Consensus 3 k~IeAiYEnGVfkPLe~l~--L~EG~kV~I~I 32 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQKVD--LKEGERVKIKL 32 (69)
T ss_dssp CCEEEEEETTEEEESSCCC--CCTTEEEEEEC
T ss_pred ceEEEEEECCEEeECCcCC--CCCCCEEEEEE
Confidence 4589999999987433221 23444555443
No 44
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=56.52 E-value=36 Score=24.27 Aligned_cols=44 Identities=14% Similarity=0.225 Sum_probs=30.7
Q ss_pred CCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccCceEEEEeCcEEEEEEe
Q 031602 67 KSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVSAISAKCENGVLTIVVE 140 (156)
Q Consensus 67 ~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~p 140 (156)
|+.|+|++++ +.++|+|- .|..++.| +.. ++..++++.|.|..+
T Consensus 12 P~gV~v~i~~-~~v~VkGp----------------------kG~L~~~~--~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGP----------------------KGELEVPV--SPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEET-TEEEEECS----------------------SCEEEEEC--CTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEeC----------------------CcEEEEEe--CCC-----EEEEEECCEEEEEEC
Confidence 6789999999 89999842 26565554 433 445578998888743
No 45
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=50.89 E-value=9 Score=25.03 Aligned_cols=18 Identities=39% Similarity=0.495 Sum_probs=15.3
Q ss_pred ceEEEEeCcEEEEEEecC
Q 031602 125 AISAKCENGVLTIVVEKL 142 (156)
Q Consensus 125 ~i~A~~~~GvL~I~~pK~ 142 (156)
.+.+.+.+|||+|+++..
T Consensus 29 d~D~e~~~gVLti~f~~~ 46 (106)
T 1ew4_A 29 DIDCEINGGVLTITFENG 46 (106)
T ss_dssp CCEEEEETTEEEEECTTS
T ss_pred CEeeeccCCEEEEEECCC
Confidence 478899999999999744
No 46
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=47.17 E-value=67 Score=23.07 Aligned_cols=46 Identities=11% Similarity=0.299 Sum_probs=30.3
Q ss_pred CCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccCceEEE-EeCcEEEEEEec
Q 031602 67 KSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVSAISAK-CENGVLTIVVEK 141 (156)
Q Consensus 67 ~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~~i~A~-~~~GvL~I~~pK 141 (156)
|+.++|++++ +.++|+|- .|...|.| +. . .+.-. .++|.|.|..+-
T Consensus 13 P~gV~v~i~~-~~V~VkGP----------------------kG~L~~~~--~~-~---~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGP----------------------RGTLTKNL--KH-I---DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEET-TEEEEEET----------------------TEEEEEEC--TT-T---CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcC----------------------CeEEEEEc--cC-C---cEEEEEecCCeEEEEECC
Confidence 5889999999 89999843 25555544 32 1 23444 468888887653
No 47
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=47.06 E-value=15 Score=24.72 Aligned_cols=17 Identities=18% Similarity=0.384 Sum_probs=14.7
Q ss_pred eEEEEeCcEEEEEEecC
Q 031602 126 ISAKCENGVLTIVVEKL 142 (156)
Q Consensus 126 i~A~~~~GvL~I~~pK~ 142 (156)
+.+.+.+|||+|+++..
T Consensus 49 ~Dve~~~gVLti~f~~~ 65 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPAF 65 (123)
T ss_dssp CEEEECSSEEEEECTTT
T ss_pred eEEEccCCEEEEEECCC
Confidence 78889999999999754
No 48
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=46.71 E-value=63 Score=23.22 Aligned_cols=45 Identities=18% Similarity=0.226 Sum_probs=29.9
Q ss_pred CCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccCceEEEE--eCcEEEEEEe
Q 031602 67 KSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVSAISAKC--ENGVLTIVVE 140 (156)
Q Consensus 67 ~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~~i~A~~--~~GvL~I~~p 140 (156)
|+.++|.+++ +.++|+|- .|..+|.|. +. .++..+ +++.|.|..+
T Consensus 13 P~gV~v~i~~-~~V~VkGP----------------------kG~L~~~~~-~~-----~v~i~~~~~~~~l~v~~~ 59 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGP----------------------RGKLTRNFK-HL-----NLDFQLLEGGRKLQVDAW 59 (190)
T ss_dssp CTTCEEEEET-TEEEEEET----------------------TEEEEEECC-CT-----TEEEEEETTTTEEEEEES
T ss_pred CCCCEEEEeC-CEEEEECC----------------------CceEEEEcc-CC-----cEEEEEEcCCCEEEEEEC
Confidence 5789999999 89999843 255555442 11 244455 7888888754
No 49
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=43.83 E-value=35 Score=22.64 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=24.2
Q ss_pred CeEEEEEECCCCcccCceEEEEeCcEEEEEEe
Q 031602 109 QKLLRKFKLPEDANVSAISAKCENGVLTIVVE 140 (156)
Q Consensus 109 ~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~p 140 (156)
....-+|.||.+++.+.+...+...-|.|.+.
T Consensus 14 ~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 14 NEINIQFPVTGDADSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp TEEEEEEECC---CCSCEEEEEETTEEEEEET
T ss_pred CEEEEEEECCCCCCccceEEEEECCEEEEEEC
Confidence 44566789999999999999999999999873
No 50
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=37.69 E-value=62 Score=23.26 Aligned_cols=18 Identities=17% Similarity=0.560 Sum_probs=15.3
Q ss_pred CCCCeEEEEecCcEEEEEe
Q 031602 66 PKSDIQVTVEDERTLVIRS 84 (156)
Q Consensus 66 ~~edi~V~~~~~~~L~I~~ 84 (156)
=|+.|+|++++ +.++|+|
T Consensus 12 IP~gV~V~i~~-~~VtVkG 29 (192)
T 2zkr_e 12 IPENVDITLKG-RTVIVKG 29 (192)
T ss_dssp CCTTCEEEEET-TEEEEEE
T ss_pred cCCCCEEEEeC-CEEEEEC
Confidence 36889999999 8999984
No 51
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=36.86 E-value=23 Score=23.98 Aligned_cols=17 Identities=24% Similarity=0.356 Sum_probs=14.7
Q ss_pred CceEEEEeCcEEEEEEe
Q 031602 124 SAISAKCENGVLTIVVE 140 (156)
Q Consensus 124 ~~i~A~~~~GvL~I~~p 140 (156)
..+.+.+.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45788899999999996
No 52
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=36.80 E-value=29 Score=25.70 Aligned_cols=45 Identities=20% Similarity=0.385 Sum_probs=30.3
Q ss_pred CCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccCceEE-EEeCcEEEEEEec
Q 031602 67 KSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVSAISA-KCENGVLTIVVEK 141 (156)
Q Consensus 67 ~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~~i~A-~~~~GvL~I~~pK 141 (156)
|+.|+|.+++ +.++|+|- .|..++.| |..+ .. ..+||.|.|..+.
T Consensus 54 P~gV~V~i~~-~~VtVKGP----------------------kG~L~~~~--~~~v-----~i~~~e~~~i~v~~~~ 99 (223)
T 3bbo_I 54 PSNVTIALEG-QDLKVKGP----------------------LGELALTY--PREV-----ELTKEESGFLRVKKTV 99 (223)
T ss_dssp STTSCEEESS-SEEEECCS----------------------SCCEEEEC--CSSC-----EEEECSSSCEEEECSS
T ss_pred CCCCEEEEeC-CEEEEECC----------------------CeEEEEEc--CCCE-----EEEEecCCEEEEEcCC
Confidence 5788999998 79999832 25565544 5444 33 4578888887654
No 53
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=35.92 E-value=37 Score=24.12 Aligned_cols=43 Identities=16% Similarity=0.350 Sum_probs=29.4
Q ss_pred CCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccCceEEEEeCcEEEEEE
Q 031602 67 KSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVSAISAKCENGVLTIVV 139 (156)
Q Consensus 67 ~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~ 139 (156)
|+.|+|++++ +.++|+|- .|..++.| +.. ++..++++.|+|..
T Consensus 11 P~gV~v~i~~-~~V~VkGp----------------------kG~L~~~~--~~~-----v~i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKING-QVITIKGK----------------------NGELTRTL--NDA-----VEVKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEESS-SEEECCBT----------------------TBCCEEEC--CSS-----CEEEEETTEEEEEC
T ss_pred CCCcEEEEeC-CEEEEEcC----------------------CEEEEEEC--CCC-----EEEEEeCCEEEEEE
Confidence 5788899988 78998732 25555554 433 45567889888873
No 54
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=33.36 E-value=58 Score=21.27 Aligned_cols=32 Identities=9% Similarity=0.200 Sum_probs=26.5
Q ss_pred CeEEEEEECCCCc-ccCceEEEEeCcEEEEEEe
Q 031602 109 QKLLRKFKLPEDA-NVSAISAKCENGVLTIVVE 140 (156)
Q Consensus 109 ~~f~r~~~LP~~v-~~~~i~A~~~~GvL~I~~p 140 (156)
..-.-+|.||..+ +.+.+...+...-|.|.+.
T Consensus 29 ~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 29 TDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp TEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred cEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 4456688999888 8899999999998998873
No 55
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=31.58 E-value=60 Score=23.27 Aligned_cols=18 Identities=11% Similarity=0.394 Sum_probs=15.3
Q ss_pred CCCeEEEEecCcEEEEEeC
Q 031602 67 KSDIQVTVEDERTLVIRSN 85 (156)
Q Consensus 67 ~edi~V~~~~~~~L~I~~~ 85 (156)
|+.++|++++ +.++|+|-
T Consensus 13 P~gV~v~i~~-~~V~VkGP 30 (188)
T 4a17_E 13 PDKVTITAKQ-RVVEVKGP 30 (188)
T ss_dssp CTTCEEEEET-TEEEEEET
T ss_pred CCCcEEEEeC-CEEEEEcC
Confidence 7889999999 89999843
No 56
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=31.31 E-value=61 Score=22.29 Aligned_cols=32 Identities=9% Similarity=0.279 Sum_probs=26.4
Q ss_pred CeEEEEEECCCCcccCceEEEEeCcEEEEEEe
Q 031602 109 QKLLRKFKLPEDANVSAISAKCENGVLTIVVE 140 (156)
Q Consensus 109 ~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~~p 140 (156)
....-+|.||..+....+...+...-|+|.+.
T Consensus 23 ~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 23 EEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp SEEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred CEEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 34566789999998899999999998888773
No 57
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=30.94 E-value=76 Score=20.58 Aligned_cols=26 Identities=15% Similarity=0.117 Sum_probs=14.4
Q ss_pred EEEEECCCCcccCceEEEEeCcEEEEEEecC
Q 031602 112 LRKFKLPEDANVSAISAKCENGVLTIVVEKL 142 (156)
Q Consensus 112 ~r~~~LP~~v~~~~i~A~~~~GvL~I~~pK~ 142 (156)
.|++..| --++|.++|.+|.|.+.+.
T Consensus 22 ~RSI~~~-----iPi~A~id~~~L~I~F~~~ 47 (108)
T 3d33_A 22 IRSAATN-----CPITVFTDGYLLTLKNASP 47 (108)
T ss_dssp ------C-----CSEEEEEETTEEEEEESSC
T ss_pred ccccCCC-----CCcEEEEECCEEEEEECCc
Confidence 5667533 2257888889999998654
No 58
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=28.35 E-value=27 Score=21.39 Aligned_cols=15 Identities=7% Similarity=0.293 Sum_probs=12.2
Q ss_pred cCceEEEEeCcEEEE
Q 031602 123 VSAISAKCENGVLTI 137 (156)
Q Consensus 123 ~~~i~A~~~~GvL~I 137 (156)
.++=++.|++|||+|
T Consensus 46 KnkWKc~LKdGim~i 60 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNL 60 (76)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CceEEEEEeccEEEE
Confidence 445789999999987
No 59
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=27.91 E-value=84 Score=20.44 Aligned_cols=33 Identities=6% Similarity=-0.007 Sum_probs=27.4
Q ss_pred CeEEEEEECCCC--cccCceEEEEeCcEEEEEEec
Q 031602 109 QKLLRKFKLPED--ANVSAISAKCENGVLTIVVEK 141 (156)
Q Consensus 109 ~~f~r~~~LP~~--v~~~~i~A~~~~GvL~I~~pK 141 (156)
....-+|.||.. +....+...+...-|.|.+.-
T Consensus 26 ~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg 60 (121)
T 3qor_A 26 SELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG 60 (121)
T ss_dssp SEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETT
T ss_pred ceEEEEEECCCCCcccccceEEEEEcCEEEEEEcC
Confidence 456667899988 888999999999999998863
No 60
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=26.98 E-value=92 Score=20.43 Aligned_cols=32 Identities=6% Similarity=0.012 Sum_probs=26.5
Q ss_pred CeEEEEEECCCC--cccCceEEEEeCcEEEEEEe
Q 031602 109 QKLLRKFKLPED--ANVSAISAKCENGVLTIVVE 140 (156)
Q Consensus 109 ~~f~r~~~LP~~--v~~~~i~A~~~~GvL~I~~p 140 (156)
..-.-+|.||.. +....+...+...-|.|.+.
T Consensus 17 ~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k 50 (131)
T 1wfi_A 17 AELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK 50 (131)
T ss_dssp SEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET
T ss_pred CEEEEEEECCCCCcccccceEEEEeCCEEEEEEC
Confidence 344557889977 88999999999999999984
No 61
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=26.51 E-value=2e+02 Score=21.27 Aligned_cols=65 Identities=14% Similarity=0.181 Sum_probs=39.3
Q ss_pred EcCCCCCCCeEEEEe-cCcEEEEEeCcEEeccCCccccceEEEeeeeeCCeEEEEEECCCCcccCceEEEEeCcEEEEE
Q 031602 61 DVPGRPKSDIQVTVE-DERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQKLLRKFKLPEDANVSAISAKCENGVLTIV 138 (156)
Q Consensus 61 ~lpG~~~edi~V~~~-~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~r~~~LP~~v~~~~i~A~~~~GvL~I~ 138 (156)
.|||+..+==-+.+. +++.|.+.. ++.....+... .|...|+++|...-|++.|... .+|.+.|.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~----------d~~~~I~~ld~--~g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTI----------NKPAAIVEMTT--NGDLIRTIPLDFVKDLETIEYI-GDNQFVIS 86 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEE----------ETTEEEEEEET--TCCEEEEEECSSCSSEEEEEEC-STTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEE----------CCCCeEEEEeC--CCCEEEEEecCCCCChHHeEEe-CCCEEEEE
Confidence 589998753336665 236777641 11233333333 3789999999876788887643 56665553
No 62
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=26.35 E-value=1.1e+02 Score=19.79 Aligned_cols=34 Identities=9% Similarity=0.234 Sum_probs=26.2
Q ss_pred EEECCCeEEEEEEc-CCCCCCCeEEEEecCcEEEEEe
Q 031602 49 ILDSPKDYIFFMDV-PGRPKSDIQVTVEDERTLVIRS 84 (156)
Q Consensus 49 i~e~~~~~~l~~~l-pG~~~edi~V~~~~~~~L~I~~ 84 (156)
+.++++.+.|.+.+ ||.+.+.| ..+.+ +.|.|+.
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I-~g~~~-~~LkV~v 42 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSI-VGLHG-DEVKVAI 42 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEE-EEECS-SCEEEEC
T ss_pred EEECCCeEEEEEEEeeCCCccee-ecccC-CEEEEEE
Confidence 45678888888877 89999887 35667 6899873
No 63
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans}
Probab=25.81 E-value=1.4e+02 Score=23.07 Aligned_cols=49 Identities=16% Similarity=0.053 Sum_probs=26.4
Q ss_pred CCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEeeeeeCC-eEEEEEECCC
Q 031602 66 PKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLERRVPQ-KLLRKFKLPE 119 (156)
Q Consensus 66 ~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e~~~~~-~f~r~~~LP~ 119 (156)
.++++.| ++ +.|+|+ +.+......-.++.+..+.....| .|+-+++||.
T Consensus 72 ~~~Nv~v--~d-G~L~I~--a~~~~~~~~~tSg~i~Sk~~~~ygg~~EaR~Kl~~ 121 (308)
T 4atf_A 72 KRDRSYV--AD-GELKMW--ATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMN 121 (308)
T ss_dssp CGGGEEE--ET-TEEEEE--CEECTTSSCEEECEEEESSCBCSSEEEEEEEECCS
T ss_pred cccceEE--EC-CEEEEE--EEecCCCCCEEEEEEEECceeecCeEEEEEEECCC
Confidence 4566555 47 689998 444321111223333332222236 8999999984
No 64
>1s21_A ORF2; predominantly beta-strand, chaperone; 2.00A {Pseudomonas syringae PV} SCOP: d.166.1.4
Probab=24.45 E-value=37 Score=24.75 Aligned_cols=27 Identities=30% Similarity=0.281 Sum_probs=15.4
Q ss_pred cCceEEEEeC----cEEEEEEecCCCCCCCeEEEEec
Q 031602 123 VSAISAKCEN----GVLTIVVEKLPPPPKPKTVEVAI 155 (156)
Q Consensus 123 ~~~i~A~~~~----GvL~I~~pK~~~~~~~~~I~I~~ 155 (156)
+-+++|+.++ ..|.|+||+- ++|+++|
T Consensus 174 Y~D~Sas~~~~d~~~~LIVTLP~g------~kVpv~I 204 (206)
T 1s21_A 174 YSDTSAMSAGGDSVEALIVTLPKG------RKVPVNI 204 (206)
T ss_dssp EEBC-----CCSSCEEEEEECCTT------CEEECEE
T ss_pred eccchhhhcCCCCCceEEEECCCC------cccceee
Confidence 3446788876 5999999975 5666654
No 65
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2
Probab=24.29 E-value=1.6e+02 Score=22.87 Aligned_cols=49 Identities=12% Similarity=0.001 Sum_probs=27.2
Q ss_pred CCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEEee-eeeCC-eEEEEEECCCC
Q 031602 66 PKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIRLE-RRVPQ-KLLRKFKLPED 120 (156)
Q Consensus 66 ~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~~e-~~~~~-~f~r~~~LP~~ 120 (156)
.++++. +.+ +.|+|+ +.+......-.++++..+. ..| | .|+-+++||..
T Consensus 103 ~~~Nv~--v~d-G~L~I~--a~~~~g~~~~tSg~i~Sk~~f~Y-Gr~vEaRaKlp~g 153 (346)
T 1o4z_A 103 KRDRSY--VAD-GELKMW--ATRKPGSDKINMGCITSKTRVVY-PVYIEARAKVMNS 153 (346)
T ss_dssp CGGGEE--EET-TEEEEE--CEECTTSSCEEECEEEESSCBCS-SEEEEEEEECCSS
T ss_pred cccCEE--EEC-CEEEEE--EEecCCCCcEEeeEEEeCccEeC-CeEEEEEEEecCC
Confidence 345555 457 699998 4443211112233333322 334 8 59999999964
No 66
>1nh2_C Transcription initiation factor IIA large chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: b.56.1.1 PDB: 1ytf_C*
Probab=22.88 E-value=40 Score=20.81 Aligned_cols=15 Identities=27% Similarity=0.399 Sum_probs=12.2
Q ss_pred cCceEEEEeCcEEEE
Q 031602 123 VSAISAKCENGVLTI 137 (156)
Q Consensus 123 ~~~i~A~~~~GvL~I 137 (156)
.++=++.|++||++|
T Consensus 48 KnKWKc~LKdGi~~i 62 (79)
T 1nh2_C 48 KARWKCSLKDGVVTI 62 (79)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred cceEEEEEeeeEEEE
Confidence 445789999999987
No 67
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=21.37 E-value=2.5e+02 Score=21.04 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=26.8
Q ss_pred CCCCeEEEEecCcEEEEEeCcEEeccCCccccceEEE-eeeeeCCeEEEEEECCCC
Q 031602 66 PKSDIQVTVEDERTLVIRSNGKRKREDGEEEGCKCIR-LERRVPQKLLRKFKLPED 120 (156)
Q Consensus 66 ~~edi~V~~~~~~~L~I~~~~~~~~~~~~~~~~~~~~-~e~~~~~~f~r~~~LP~~ 120 (156)
.++++.| ++ +.|.|++. + ..++.+.. ....+ |.|+-+++||..
T Consensus 31 ~~~Nv~v--~~-G~L~L~~~--k------~tsa~i~Sk~~~~y-G~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQ-GSLTIWLD--S------TSGSGFKSINRYRS-GYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ET-TEEEEEEC--S------SCCEEEEEEEEEEE-EEEEEEEECCCS
T ss_pred CCCCEEE--EC-CEEEEEEe--c------CCCCEEEECceEee-EEEEEEEEeCCC
Confidence 4566665 66 57888743 1 12334432 34455 999999999964
Done!